F309012

General Info

Members Datasets Scaffolds Average Seq Length
201 139 402 255

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0042654|Ga0496121_0042654_2898_3734
Length 278
Sequence MSRIFISGSSAGLGLMTGELLSSQGHQVVLHARNAARADDVRRALPQAEAIVEGDLDTIAGAKDIAARVNRMGRFDAVIHNAAVGYREDYHLTADGLPHVFAINTLSAYILTALIERPQRLVYLSSGMHHHSDANLDDVLWRERRWNGSTAYAESKLYDTMLAFAIARHWPSTLSNALEPGWVPTAMGGAGAPDDLDQAHLTQAWLASSDDPKARVTGRYFYHLRPLAPNPQARDGALQDRLIAICAELSGVTLQIRSHPGEGTATKAVLRVPPATGR

Samples

Sample ID Description Type Environment
1 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
21 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
36 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
37 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
56 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
58 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
59 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
60 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
61 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
71 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
88 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
89 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
93 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
100 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
101 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
102 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
103 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
104 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
105 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
106 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
113 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
114 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
115 2509276019 Ensifer aridi TW10 Isolate Nodule
116 2512875024
117 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
118 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
119 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
120 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
121 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
122 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
123 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
124 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
125 2831864461 Roseateles noduli HZ7 Isolate Nodule
126 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
127 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
128 2855730933 Achromobacter sp. HZ28 Isolate Nodule
129 2855767633 Achromobacter sp. HZ34 Isolate Nodule
130 2904564687 Burkholderia sp. 571 Isolate Unclassified
131 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
132 2909042592 Labrys sp. LIt4 Isolate Nodule
133 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
134 2928536128 Burkholderia sola 565 Isolate Unclassified
135 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
136 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
137 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
138 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
139 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.07
Metatranscriptomes 1.49
Isolates 12.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.48
Nodule 8.46
Rhizoplane 2.99
Rhizosphere 65.67
Stem 0
Stem Tuber 0
Unclassified 2.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496121_0042654 3300048924 Bacteria 3942
2 rootH1_10033089 3300003316 Bacteria 1689
3 rootH1_10033090 3300003316 Bacteria 2662
4 rootH2_10160423 3300003320 Bacteria 1221
5 rootH2_10160424 3300003320 Bacteria 1368
6 rootL2_10039210 3300003322 Bacteria 28049
7 rootH1_10131434 3300003323 Bacteria 1321
8 Ga0058692_1000693 3300003856 Bacteria 13849
9 Ga0058692_1001652 3300003856 Bacteria 8000
10 Ga0065165_1022124 3300005262 Bacteria 2189
11 Ga0070683_100009414 3300005329 Bacteria 8354
12 Ga0070683_100294830 3300005329 Bacteria 1542
13 Ga0070661_100051261 3300005344 Bacteria 3020
14 Ga0070714_100318730 3300005435 Bacteria 1453
15 Ga0070713_100481236 3300005436 Unclassified 1169
16 Ga0070711_100199012 3300005439 Bacteria 1545
17 Ga0070684_100121460 3300005535 Bacteria 2350
18 Ga0068853_100037927 3300005539 Bacteria 4103
19 Ga0068855_100008924 3300005563 Bacteria 12119
20 Ga0068855_100011430 3300005563 Bacteria 10724
21 Ga0068855_100137561 3300005563 Bacteria 2786
22 Ga0068857_100000547 3300005577 Bacteria 27391
23 Ga0068856_100008077 3300005614 Bacteria 10273
24 Ga0068856_100442076 3300005614 Bacteria 1321
25 Ga0068856_100667888 3300005614 Bacteria 1060
26 Ga0068852_100000009 3300005616 Bacteria 149600
27 Ga0068852_100000796 3300005616 Bacteria 20780
28 Ga0068852_100026980 3300005616 Bacteria 4676
29 Ga0075430_100429234 3300006846 Unclassified 1091
30 Ga0079104_1003263 3300006946 Bacteria 7759
31 Ga0105251_10060024 3300009011 Bacteria 1792
32 Ga0105240_10000148 3300009093 Bacteria 142265
33 Ga0105240_10000517 3300009093 Bacteria 71134
34 Ga0105240_10053277 3300009093 Bacteria 5079
35 Ga0114129_10823754 3300009147 Bacteria 1182
36 Ga0105241_10000271 3300009174 Bacteria 38550
37 Ga0105237_10113700 3300009545 Bacteria 2699
38 Ga0105237_10140678 3300009545 Bacteria 2407
39 Ga0105238_10001103 3300009551 Bacteria 27292
40 Ga0105238_10042928 3300009551 Bacteria 4577
41 Ga0105238_10112620 3300009551 Bacteria 2701
42 Ga0105239_10013577 3300010375 Bacteria 9041
43 Ga0105239_11158972 3300010375 Bacteria 890
44 Ga0157370_10001908 3300013104 Bacteria 25647
45 Ga0157369_10000035 3300013105 Bacteria 191300
46 Ga0157369_10006440 3300013105 Bacteria 13609
47 Ga0157369_10009710 3300013105 Bacteria 11005
48 Ga0157369_10359633 3300013105 Bacteria 1511
49 Ga0157374_10003022 3300013296 Bacteria 14092
50 Ga0157374_10172767 3300013296 Bacteria 2109
51 Ga0157378_10006957 3300013297 Bacteria 9869
52 Ga0157372_10000049 3300013307 Bacteria 142350
53 Ga0157372_10004559 3300013307 Bacteria 14749
54 Ga0157376_10029290 3300014969 Bacteria 4385
55 Ga0182006_1046803 3300015261 Bacteria 1679
56 Ga0182007_10003599 3300015262 Bacteria 7276
57 Ga0214542_1029386 3300021321 Bacteria 2256
58 Ga0214543_1003948 3300021327 Bacteria 28458
59 Ga0209455_1019571 3300025272 Bacteria 1363
60 Ga0209673_1012755 3300025273 Bacteria 3362
61 Ga0209564_1000003 3300025295 Bacteria 1585848
62 Ga0207713_1001486 3300025735 Bacteria 18542
63 Ga0207713_1015430 3300025735 Bacteria 3921
64 Ga0207654_10000496 3300025911 Bacteria 22526
65 Ga0207695_10000105 3300025913 Bacteria 254764
66 Ga0207695_10000116 3300025913 Bacteria 239510
67 Ga0207695_10000166 3300025913 Bacteria 195439
68 Ga0207695_10093940 3300025913 Bacteria 3008
69 Ga0207695_10389626 3300025913 Bacteria 1278
70 Ga0207671_10000922 3300025914 Bacteria 36894
71 Ga0207693_10132103 3300025915 Bacteria 1962
72 Ga0207649_10034229 3300025920 Bacteria 3042
73 Ga0207694_10000084 3300025924 Bacteria 108906
74 Ga0207694_10075330 3300025924 Bacteria 2641
75 Ga0207664_10059175 3300025929 Bacteria 3050
76 Ga0207661_10007612 3300025944 Bacteria 7703
77 Ga0207661_10491157 3300025944 Bacteria 1121
78 Ga0207667_10006946 3300025949 Bacteria 13681
79 Ga0207667_10006993 3300025949 Bacteria 13631
80 Ga0207667_10102799 3300025949 Bacteria 2947
81 Ga0207639_10002299 3300026041 Bacteria 12824
82 Ga0207702_10017193 3300026078 Bacteria 5984
83 Ga0207702_10377778 3300026078 Bacteria 1362
84 Ga0207702_10566134 3300026078 Bacteria 1113
85 Ga0207674_10003906 3300026116 Bacteria 18131
86 Ga0207698_10000138 3300026142 Bacteria 46027
87 Ga0207698_10003865 3300026142 Bacteria 9067
88 Ga0207698_10196284 3300026142 Bacteria 1803
89 Ga0209281_1000441 3300027111 Bacteria 59960
90 Ga0209371_1000282 3300027312 Bacteria 58487
91 Ga0209371_1000461 3300027312 Bacteria 40005
92 Ga0265354_1004636 3300028016 Bacteria 1431
93 Ga0265356_1001842 3300028017 Bacteria 2980
94 Ga0265355_1003630 3300028036 Bacteria 1138
95 Ga0268256_1000204 3300030500 Bacteria 67389
96 Ga0268256_1000529 3300030500 Bacteria 31787
97 Ga0268256_1002869 3300030500 Bacteria 8293
98 Ga0268256_1008558 3300030500 Bacteria 3487
99 Ga0265770_1038347 3300030878 Bacteria 830
100 Ga0265765_1000134 3300030879 Bacteria 4475
101 Ga0265760_10000438 3300031090 Bacteria 11682
102 Ga0373946_0158969 3300035171 Unclassified 1060
103 Ga0395899_0146518 3300037312 Bacteria 1676
104 Ga0395900_0040041 3300037418 Bacteria 4829
105 Ga0395900_0096823 3300037418 Bacteria 3032
106 Ga0395898_0393527 3300037466 Bacteria 1321
107 Ga0395905_0000328 3300037471 Bacteria 68234
108 Ga0395905_0008620 3300037471 Bacteria 10046
109 Ga0395905_0013344 3300037471 Bacteria 7874
110 Ga0395905_0043694 3300037471 Bacteria 4203
111 Ga0395901_0343963 3300038443 Bacteria 1540
112 Ga0466972_0007025 3300044658 Bacteria 5649
113 Ga0466982_0006455 3300044672 Bacteria 5669
114 Ga0466965_0014748 3300044683 Bacteria 3700
115 Ga0466965_0056574 3300044683 Bacteria 1953
116 Ga0466961_0015253 3300044693 Bacteria 4934
117 Ga0466964_0014481 3300044706 Bacteria 3000
118 Ga0466968_0000221 3300044735 Bacteria 17709
119 Ga0466970_0030035 3300044765 Bacteria 2865
120 Ga0466957_0008956 3300044842 Bacteria 5705
121 Ga0466957_0022216 3300044842 Bacteria 3741
122 Ga0466960_0011714 3300044901 Bacteria 3680
123 Ga0466960_0113547 3300044901 Bacteria 1410
124 Ga0466958_0008706 3300045836 Bacteria 5634
125 Ga0466958_0164403 3300045836 Bacteria 1404
126 Ga0466967_0022987 3300045976 Bacteria 5101
127 Ga0466967_0060196 3300045976 Unclassified 3364
128 Ga0466967_0207419 3300045976 Bacteria 1858
129 Ga0495590_0000540 3300046457 Bacteria 18150
130 Ga0495580_0088122 3300046472 Bacteria 2161
131 Ga0495606_0224911 3300046507 Bacteria 1055
132 Ga0495616_0082972 3300046513 Bacteria 1529
133 Ga0495652_0003609 3300046529 Bacteria 15171
134 Ga0495587_0100875 3300046536 Bacteria 1663
135 Ga0495661_0331292 3300046665 Bacteria 754
136 Ga0495623_0021946 3300046679 Bacteria 4123
137 Ga0495660_0024230 3300046810 Bacteria 3457
138 Ga0495604_0121579 3300047317 Bacteria 1889
139 Ga0495674_0516454 3300047319 Bacteria 954
140 Ga0495615_0010606 3300048090 Bacteria 1848
141 Ga0495626_0000048 3300048091 Bacteria 161634
142 Ga0496102_0549207 3300048905 Bacteria 1078
143 Ga0496104_0197698 3300048907 Bacteria 1922
144 Ga0496105_0258384 3300048908 Bacteria 1409
145 Ga0496108_0069049 3300048911 Bacteria 2982
146 Ga0496115_0024971 3300048918 Bacteria 4649
147 Ga0496116_0008016 3300048919 Bacteria 9243
148 Ga0496116_0018808 3300048919 Bacteria 5308
149 Ga0496117_0010307 3300048920 Bacteria 8544
150 Ga0496117_0113745 3300048920 Bacteria 1679
151 Ga0496118_0003248 3300048921 Bacteria 20726
152 Ga0496118_0036802 3300048921 Bacteria 3950
153 Ga0496119_0011646 3300048922 Bacteria 7247
154 Ga0496120_0040069 3300048923 Bacteria 2755
155 Ga0496121_0015722 3300048924 Bacteria 7889
156 Ga0496121_0046200 3300048924 Bacteria 3729
157 Ga0496122_0002210 3300048925 Bacteria 28395
158 Ga0496122_0036226 3300048925 Bacteria 3995
159 Ga0496123_0000836 3300048926 Bacteria 49282
160 Ga0496123_0004995 3300048926 Bacteria 13584
161 Ga0496124_0007753 3300048927 Bacteria 11342
162 Ga0496124_0219648 3300048927 Bacteria 1430
163 Ga0496124_0244301 3300048927 Bacteria 1332
164 Ga0496124_0290527 3300048927 Bacteria 1187
165 Ga0496125_0000485 3300048928 Bacteria 69763
166 Ga0496125_0046370 3300048928 Bacteria 3647
167 Ga0496126_0094205 3300048929 Bacteria 2628
168 Ga0496126_0217742 3300048929 Bacteria 1605
169 Ga0496126_0380916 3300048929 Bacteria 1148
170 nmdc:mga05p37_282274_c1 3300050507 Bacteria 1980
171 nmdc:mga05p37_81901_c1 3300050507 Bacteria 3976
172 nmdc:mga09592_484478_c1 3300050508 Unclassified 1065
173 nmdc:mga0a205_456656_c1 3300050515 Bacteria 1137
174 Ga0500556_0169805 3300053104 Bacteria 862
175 Ga0500618_001429 3300053125 Bacteria 10652
176 Ga0500616_0038756 3300053153 Bacteria 2572
177 2509376021 2509276019 Bacteria 6802256
178 2512958491 2512875024 Bacteria 7195110
179 2513924173 2513237146 Bacteria 7166346
180 2514035104 2513237164 Bacteria 7563725
181 2558862023 2558860100 Bacteria 8458965
182 2599419873 2599185170 Bacteria 7295545
183 2671117242 2667528174 Bacteria 6435400
184 2775539002 2775506706 Bacteria 4873073
185 2792583252 2791355082 Bacteria 5973319
186 2819613748 2818991448 Bacteria 6772224
187 2831866410 2831864461 Bacteria 6502356
188 2838039597 2838035591 Bacteria 7166484
189 2850083957 2850079185 Bacteria 6848280
190 2855732393 2855730933 Bacteria 7047938
191 2855769101 2855767633 Bacteria 7049357
192 2904571605 2904564687 Bacteria 7609577
193 2904578661 2904571731 Bacteria 7608790
194 2909047660 2909042592 Bacteria 6499737
195 2919414209 2919408235 Bacteria 6149349
196 2928536506 2928536128 Bacteria 7657547
197 2937001697 2936996657 Bacteria 6298727
198 2939604369 2939602548 Bacteria 4950493
199 8005651748 8005645114 Bacteria 6950293
200 8005686198 8005682033 Bacteria 6726518
201 8047675887 8047673197 Bacteria 7395230
202 Ga0496121_0042654
203 rootH1_10033089
204 rootH1_10033090
205 rootH2_10160423
206 rootH2_10160424
207 rootL2_10039210
208 rootH1_10131434
209 Ga0058692_1000693
210 Ga0058692_1001652
211 Ga0065165_1022124
212 Ga0070683_100009414
213 Ga0070683_100294830
214 Ga0070661_100051261
215 Ga0070714_100318730
216 Ga0070713_100481236
217 Ga0070711_100199012
218 Ga0070684_100121460
219 Ga0068853_100037927
220 Ga0068855_100008924
221 Ga0068855_100011430
222 Ga0068855_100137561
223 Ga0068857_100000547
224 Ga0068856_100008077
225 Ga0068856_100442076
226 Ga0068856_100667888
227 Ga0068852_100000009
228 Ga0068852_100000796
229 Ga0068852_100026980
230 Ga0075430_100429234
231 Ga0079104_1003263
232 Ga0105251_10060024
233 Ga0105240_10000148
234 Ga0105240_10000517
235 Ga0105240_10053277
236 Ga0114129_10823754
237 Ga0105241_10000271
238 Ga0105237_10113700
239 Ga0105237_10140678
240 Ga0105238_10001103
241 Ga0105238_10042928
242 Ga0105238_10112620
243 Ga0105239_10013577
244 Ga0105239_11158972
245 Ga0157370_10001908
246 Ga0157369_10000035
247 Ga0157369_10006440
248 Ga0157369_10009710
249 Ga0157369_10359633
250 Ga0157374_10003022
251 Ga0157374_10172767
252 Ga0157378_10006957
253 Ga0157372_10000049
254 Ga0157372_10004559
255 Ga0157376_10029290
256 Ga0182006_1046803
257 Ga0182007_10003599
258 Ga0214542_1029386
259 Ga0214543_1003948
260 Ga0209455_1019571
261 Ga0209673_1012755
262 Ga0209564_1000003
263 Ga0207713_1001486
264 Ga0207713_1015430
265 Ga0207654_10000496
266 Ga0207695_10000105
267 Ga0207695_10000116
268 Ga0207695_10000166
269 Ga0207695_10093940
270 Ga0207695_10389626
271 Ga0207671_10000922
272 Ga0207693_10132103
273 Ga0207649_10034229
274 Ga0207694_10000084
275 Ga0207694_10075330
276 Ga0207664_10059175
277 Ga0207661_10007612
278 Ga0207661_10491157
279 Ga0207667_10006946
280 Ga0207667_10006993
281 Ga0207667_10102799
282 Ga0207639_10002299
283 Ga0207702_10017193
284 Ga0207702_10377778
285 Ga0207702_10566134
286 Ga0207674_10003906
287 Ga0207698_10000138
288 Ga0207698_10003865
289 Ga0207698_10196284
290 Ga0209281_1000441
291 Ga0209371_1000282
292 Ga0209371_1000461
293 Ga0265354_1004636
294 Ga0265356_1001842
295 Ga0265355_1003630
296 Ga0268256_1000204
297 Ga0268256_1000529
298 Ga0268256_1002869
299 Ga0268256_1008558
300 Ga0265770_1038347
301 Ga0265765_1000134
302 Ga0265760_10000438
303 Ga0373946_0158969
304 Ga0395899_0146518
305 Ga0395900_0040041
306 Ga0395900_0096823
307 Ga0395898_0393527
308 Ga0395905_0000328
309 Ga0395905_0008620
310 Ga0395905_0013344
311 Ga0395905_0043694
312 Ga0395901_0343963
313 Ga0466972_0007025
314 Ga0466982_0006455
315 Ga0466965_0014748
316 Ga0466965_0056574
317 Ga0466961_0015253
318 Ga0466964_0014481
319 Ga0466968_0000221
320 Ga0466970_0030035
321 Ga0466957_0008956
322 Ga0466957_0022216
323 Ga0466960_0011714
324 Ga0466960_0113547
325 Ga0466958_0008706
326 Ga0466958_0164403
327 Ga0466967_0022987
328 Ga0466967_0060196
329 Ga0466967_0207419
330 Ga0495590_0000540
331 Ga0495580_0088122
332 Ga0495606_0224911
333 Ga0495616_0082972
334 Ga0495652_0003609
335 Ga0495587_0100875
336 Ga0495661_0331292
337 Ga0495623_0021946
338 Ga0495660_0024230
339 Ga0495604_0121579
340 Ga0495674_0516454
341 Ga0495615_0010606
342 Ga0495626_0000048
343 Ga0496102_0549207
344 Ga0496104_0197698
345 Ga0496105_0258384
346 Ga0496108_0069049
347 Ga0496115_0024971
348 Ga0496116_0008016
349 Ga0496116_0018808
350 Ga0496117_0010307
351 Ga0496117_0113745
352 Ga0496118_0003248
353 Ga0496118_0036802
354 Ga0496119_0011646
355 Ga0496120_0040069
356 Ga0496121_0015722
357 Ga0496121_0046200
358 Ga0496122_0002210
359 Ga0496122_0036226
360 Ga0496123_0000836
361 Ga0496123_0004995
362 Ga0496124_0007753
363 Ga0496124_0219648
364 Ga0496124_0244301
365 Ga0496124_0290527
366 Ga0496125_0000485
367 Ga0496125_0046370
368 Ga0496126_0094205
369 Ga0496126_0217742
370 Ga0496126_0380916
371 nmdc:mga05p37_282274_c1
372 nmdc:mga05p37_81901_c1
373 nmdc:mga09592_484478_c1
374 nmdc:mga0a205_456656_c1
375 Ga0500556_0169805
376 Ga0500618_001429
377 Ga0500616_0038756
378 2509376021
379 2512958491
380 2513924173
381 2514035104
382 2558862023
383 2599419873
384 2671117242
385 2775539002
386 2792583252
387 2819613748
388 2831866410
389 2838039597
390 2850083957
391 2855732393
392 2855769101
393 2904571605
394 2904578661
395 2909047660
396 2919414209
397 2928536506
398 2937001697
399 2939604369
400 8005651748
401 8005686198
402 8047675887

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

2

120

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

8

214

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rnw-assembly1.cif.gz_A the crystal structure of thermosynechococcus elongatus protochlorophyllide oxidoreductase (por) in complex with nadp. 0.8622 2 253
6rnv-assembly1.cif.gz_A the crystal structure of thermosynechococcus elongatus protochlorophyllide oxidoreductase (por) 0.8499 2 253
6l1h-assembly1.cif.gz_A crystal structure of light-dependent protochlorophyllide oxidoreductase from thermosynechococcus elongatus 0.8496 2 251
3rd5-assembly1.cif.gz_A crystal structure of a putative uncharacterized protein from mycobacterium paratuberculosis 0.849 1 256
6rnw-assembly1.cif.gz_A the crystal structure of thermosynechococcus elongatus protochlorophyllide oxidoreductase (por) in complex with nadp. 0.8464 2 253
ID Description Score Start End Superfamily
af_Q9LDY7_24_316_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9074 2 251 3.40.50.720
af_Q91WL8_113_409_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.903 2 251 3.40.50.720
af_Q8RWK2_22_326_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8913 2 251 3.40.50.720
af_A8WG01_1_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8877 31 255 3.40.50.720
af_Q9XVS9_38_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8869 2 253 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A822X0H9-F1-model_v4 deleted 0.9974 1 107
AF-A0A6J5DAK2-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9909 1 72
AF-A0A3M6XS34-F1-model_v4 Uncharacterized protein 0.982 1 182 GO:0016491
AF-A0A822X0H9-F1-model_v4 deleted 0.9791 1 107
AF-A0A4V1KNP7-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9789 1 255

Map