F308693

General Info

Members Datasets Scaffolds Average Seq Length
201 172 402 160

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10941592|Ga0307405_109415922
Length 180
Sequence VAAPSPTAVRWPARTPTTNRGVQTFLPYPGFLRSAEALDQKRLGKQRVETIQVLRGLTDPSYGWRHHPAVKMWAGYEEALVRYGLDICAVWCETGRADTCATTLTTDVAAACGIQLIRAQDQLATAGELPPWLGDEALHVSHRSALLRKDPERYRPMFGDIPDDLPYVWPPSDRPARCRG

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
58 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
59 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
91 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
104 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
105 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
106 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2501939600 Micromonospora sp. L5 Isolate Unclassified
110 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
111 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
112 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
113 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
114 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
115 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
116 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
117 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
118 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
119 2643221548 Streptomyces sp. Root55 Isolate Unclassified
120 2643221647 Streptomyces sp. Root369 Isolate Unclassified
121 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
122 2643221714 Streptomyces sp. Root264 Isolate Unclassified
123 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
124 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
125 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
126 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
127 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
128 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
129 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
130 2855683550 Micromonospora sp. RP3T Isolate Unclassified
131 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
132 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
133 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
134 2858868258 Micromonospora sp. MH33 Isolate Unclassified
135 2858882152 Micromonospora noduli MED15 Isolate Nodule
136 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
137 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
138 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
139 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
140 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
141 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
142 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
143 2867428634 Streptomyces sp. RP5T Isolate Unclassified
144 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
145 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
146 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
147 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
148 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
149 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
150 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
151 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
152 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
153 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
154 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
155 2902582711 Micromonospora sp. AP08 Isolate Unclassified
156 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
157 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
158 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
159 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
160 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
161 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
162 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
163 649633069 Micromonospora sp. L5 Isolate Unclassified
164 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
165 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
166 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
167 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
168 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
169 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
170 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
171 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
172 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 66.67
Metatranscriptomes 1.49
Isolates 31.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.48
Nodule 2.99
Rhizoplane 1.49
Rhizosphere 71.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10941592 3300031731 Bacteria 733
2 JGI25406J46586_10081078 3300003203 Bacteria 995
3 JGI25406J46586_10090043 3300003203 Bacteria 927
4 rootL2_10060310 3300003322 Bacteria 5997
5 Ga0070658_10208737 3300005327 Bacteria 1649
6 Ga0070683_100645379 3300005329 Bacteria 1013
7 Ga0070680_100013092 3300005336 Bacteria 6457
8 Ga0070682_100368879 3300005337 Bacteria 1076
9 Ga0070660_100263099 3300005339 Bacteria 1409
10 Ga0070659_100139133 3300005366 Bacteria 1976
11 Ga0070681_10746098 3300005458 Bacteria 895
12 Ga0070679_100130723 3300005530 Bacteria 2492
13 Ga0070679_100690512 3300005530 Bacteria 963
14 Ga0070684_100038138 3300005535 Bacteria 4126
15 Ga0068853_100282389 3300005539 Bacteria 1531
16 Ga0070665_100455594 3300005548 Bacteria 1289
17 Ga0070664_100166136 3300005564 Bacteria 1955
18 Ga0068857_100020708 3300005577 Bacteria 5788
19 Ga0068856_100319275 3300005614 Bacteria 1570
20 Ga0068864_100466720 3300005618 Bacteria 1210
21 Ga0081539_10001325 3300005985 Bacteria 43208
22 Ga0075363_100065908 3300006048 Bacteria 1959
23 Ga0075364_10296220 3300006051 Bacteria 1101
24 Ga0075364_10330560 3300006051 Bacteria 1038
25 Ga0075362_10064985 3300006177 Bacteria 1656
26 Ga0075370_10194475 3300006353 Bacteria 1196
27 Ga0105243_11013838 3300009148 Bacteria 834
28 Ga0105241_11245427 3300009174 Bacteria 706
29 Ga0105239_10919807 3300010375 Bacteria 1004
30 Ga0157370_10093331 3300013104 Bacteria 2824
31 Ga0157369_10027367 3300013105 Bacteria 6321
32 Ga0157369_10108709 3300013105 Bacteria 2949
33 Ga0157372_10115457 3300013307 Bacteria 3078
34 Ga0163163_10041706 3300014325 Bacteria 4490
35 Ga0206356_10886283 3300020070 Bacteria 793
36 Ga0206353_12002608 3300020082 Bacteria 768
37 Ga0224712_10033566 3300022467 Bacteria 1879
38 Ga0207705_10227079 3300025909 Bacteria 1419
39 Ga0207705_10669274 3300025909 Bacteria 807
40 Ga0207707_10054109 3300025912 Bacteria 3494
41 Ga0207707_10278089 3300025912 Bacteria 1450
42 Ga0207660_10034915 3300025917 Bacteria 3488
43 Ga0207657_10547529 3300025919 Bacteria 905
44 Ga0207649_10149018 3300025920 Bacteria 1609
45 Ga0207652_10046733 3300025921 Bacteria 3695
46 Ga0207690_10057409 3300025932 Bacteria 2630
47 Ga0207709_10484919 3300025935 Bacteria 962
48 Ga0207661_10031504 3300025944 Bacteria 4097
49 Ga0207661_10197129 3300025944 Bacteria 1768
50 Ga0207679_10180216 3300025945 Bacteria 1747
51 Ga0207679_10310517 3300025945 Bacteria 1362
52 Ga0207667_10421406 3300025949 Bacteria 1358
53 Ga0207676_10120224 3300026095 Bacteria 2214
54 Ga0207674_10011828 3300026116 Bacteria 9785
55 Ga0207674_10061182 3300026116 Bacteria 3805
56 Ga0268266_10173448 3300028379 Bacteria 1959
57 Ga0307408_100244682 3300031548 Bacteria 1476
58 Ga0307405_10696851 3300031731 Bacteria 841
59 Ga0307413_10628731 3300031824 Bacteria 882
60 Ga0307413_10782999 3300031824 Bacteria 800
61 Ga0307410_10046750 3300031852 Bacteria 2889
62 Ga0307410_10626576 3300031852 Bacteria 900
63 Ga0326468_10000008 3300031889 Bacteria 13948
64 Ga0307409_100062511 3300031995 Bacteria 2915
65 Ga0307409_100172580 3300031995 Bacteria 1905
66 Ga0307409_100883624 3300031995 Bacteria 906
67 Ga0307416_100114787 3300032002 Bacteria 2383
68 Ga0307414_11453193 3300032004 Bacteria 638
69 Ga0307415_100206489 3300032126 Bacteria 1563
70 Ga0307415_100677422 3300032126 Bacteria 928
71 Ga0451853_0233764 3300041512 Bacteria 760
72 Ga0439449_0084164 3300042007 Bacteria 1173
73 Ga0439463_066649 3300042016 Bacteria 921
74 Ga0450901_014511 3300042533 Bacteria 827
75 Ga0466965_0002464 3300044683 Bacteria 7871
76 Ga0466965_0117307 3300044683 Bacteria 1372
77 Ga0466966_0217114 3300044684 Bacteria 1155
78 Ga0466963_0028076 3300044694 Bacteria 3609
79 Ga0466963_0035013 3300044694 Bacteria 3270
80 Ga0466963_0146987 3300044694 Bacteria 1636
81 Ga0466964_0096484 3300044706 Bacteria 1296
82 Ga0466968_0005570 3300044735 Bacteria 4717
83 Ga0466957_0646599 3300044842 Bacteria 743
84 Ga0466960_0004455 3300044901 Bacteria 5476
85 Ga0466967_0120230 3300045976 Bacteria 2426
86 Ga0466967_0153761 3300045976 Bacteria 2153
87 Ga0466967_0275682 3300045976 Bacteria 1613
88 Ga0466967_0515993 3300045976 Bacteria 1174
89 Ga0495603_0221440 3300046455 Bacteria 1092
90 Ga0495618_0626384 3300046514 Bacteria 638
91 Ga0495588_0268378 3300046674 Bacteria 899
92 Ga0495676_0985830 3300047321 Bacteria 538
93 Ga0495685_023417 3300047447 Bacteria 2127
94 Ga0496108_0229058 3300048911 Bacteria 1616
95 Ga0496110_0273242 3300048913 Bacteria 1539
96 Ga0496112_0021386 3300048915 Bacteria 6152
97 Ga0496126_0106938 3300048929 Bacteria 2441
98 Ga0501031_0076234 3300049568 Bacteria 2183
99 Ga0501032_0110461 3300049569 Bacteria 1819
100 Ga0501034_0027451 3300049571 Bacteria 5791
101 Ga0501034_0079331 3300049571 Bacteria 3286
102 Ga0501034_1423547 3300049571 Bacteria 568
103 Ga0501036_0129971 3300049572 Bacteria 2126
104 Ga0501037_0033714 3300049573 Bacteria 3781
105 Ga0501037_0384237 3300049573 Bacteria 964
106 Ga0501038_0123600 3300049574 Bacteria 2131
107 Ga0501038_0832265 3300049574 Bacteria 684
108 Ga0501040_0034037 3300049576 Bacteria 3452
109 Ga0501041_0090013 3300049577 Bacteria 1894
110 Ga0501042_0174772 3300049578 Bacteria 1549
111 Ga0501043_0088908 3300049579 Bacteria 2427
112 Ga0501046_0119770 3300049580 Bacteria 2003
113 Ga0501047_0006104 3300049581 Bacteria 11324
114 Ga0501047_0077525 3300049581 Bacteria 3196
115 Ga0501048_0397031 3300049582 Bacteria 985
116 Ga0501067_0010945 3300049583 Bacteria 5022
117 Ga0501068_0005462 3300049584 Bacteria 6959
118 Ga0501069_0033394 3300049585 Bacteria 2834
119 Ga0501070_0629244 3300049586 Bacteria 853
120 Ga0501071_0017648 3300049587 Bacteria 4927
121 Ga0501072_0047425 3300049588 Bacteria 3383
122 Ga0501073_0041639 3300049589 Bacteria 3245
123 Ga0501074_0234972 3300049590 Bacteria 1304
124 Ga0501076_0045720 3300049592 Bacteria 3457
125 Ga0501077_0496491 3300049593 Bacteria 782
126 Ga0501079_0119786 3300049741 Bacteria 2046
127 Ga0501083_0039256 3300049744 Bacteria 3215
128 Ga0501035_0049002 3300049822 Bacteria 3787
129 Ga0501044_0181227 3300049823 Bacteria 2073
130 Ga0501044_0567790 3300049823 Bacteria 1030
131 Ga0501044_0705773 3300049823 Bacteria 894
132 nmdc:mga03683_34513_c1 3300050489 Bacteria 2047
133 nmdc:mga00v17_253833_c1 3300050491 Bacteria 1140
134 nmdc:mga00v17_463650_c1 3300050491 Bacteria 822
135 nmdc:mga07m45_422464_c1 3300050496 Bacteria 773
136 Ga0501082_0116748 3300060353 Bacteria 2311
137 Ga0530510_0562776 3300061734 Bacteria 866
138 2501945521 2501939600 Bacteria 6907073
139 2515495375 2515154088 Bacteria 5526283
140 2515720164 2515154129 Bacteria 5584369
141 2515759115 2515154137 Bacteria 5711575
142 2516086246 2515154202 Bacteria 5471270
143 2516092180 2515154203 Bacteria 5458536
144 2547405524 2547132111 Bacteria 8013147
145 2554257382 2554235005 Bacteria 6457341
146 2585302813 2582581313 Bacteria 10042643
147 2623585332 2622736626 Bacteria 7181580
148 2643759612 2643221548 Bacteria 8053412
149 2644267501 2643221647 Bacteria 10741251
150 2644462973 2643221682 Bacteria 6743283
151 2644630347 2643221714 Bacteria 9015452
152 2676493552 2675903060 Bacteria 10051191
153 2772645382 2772190715 Bacteria 6959372
154 2819693808 2818991463 Bacteria 7948711
155 2831939967 2831935698 Bacteria 5963223
156 2832010096 2832004796 Bacteria 6538017
157 2855675931 2855670206 Bacteria 7120389
158 2855677137 2855676851 Bacteria 7063653
159 2855687510 2855683550 Bacteria 7134265
160 2856859260 2856858025 Bacteria 7255264
161 2857289380 2857288857 Bacteria 7189066
162 2858850172 2858848962 Bacteria 6963058
163 2858872208 2858868258 Bacteria 7683772
164 2858884806 2858882152 Bacteria 7230291
165 2858892173 2858888857 Bacteria 7060307
166 2858900288 2858895516 Bacteria 7378898
167 2858902668 2858902515 Bacteria 7086037
168 2866068077 2866065130 Bacteria 6518152
169 2867305998 2867302475 Bacteria 7087181
170 2867317206 2867312974 Bacteria 7058875
171 2867323023 2867319477 Bacteria 7069771
172 2867432753 2867428634 Bacteria 9590268
173 2867510623 2867507094 Bacteria 6506033
174 2869053664 2869048445 Bacteria 6875584
175 2869064315 2869061728 Bacteria 7112407
176 2869072269 2869068681 Bacteria 7205615
177 2873152319 2873151551 Bacteria 8625867
178 2873316182 2873314349 Bacteria 8512634
179 2875392158 2875391855 Bacteria 7600475
180 2880494899 2880489317 Bacteria 7096270
181 2880497442 2880495981 Bacteria 7340502
182 2884697431 2884693830 Bacteria 11273186
183 2895452938 2895442618 Bacteria 11027144
184 2902584555 2902582711 Bacteria 6187705
185 2912718879 2912715099 Bacteria 9460473
186 2929226007 2929219909 Bacteria 6984360
187 2929232666 2929226422 Bacteria 7248583
188 2946072851 2946072368 Bacteria 8999607
189 2966603443 2966598605 Bacteria 7676064
190 2996221991 2996221748 Bacteria 6799777
191 3006494015 3006493962 Bacteria 8825450
192 649812872 649633069 Bacteria 6962533
193 8003832428 8003830390 Bacteria 6541657
194 8003860271 8003856774 Bacteria 7675274
195 8003875567 8003870546 Bacteria 7396674
196 8023627804 8023623736 Bacteria 8593882
197 8054704243 8054704163 Bacteria 7247792
198 8054731658 8054727385 Bacteria 7558670
199 8054739900 8054734606 Bacteria 6947278
200 8055413513 8055412473 Bacteria 6257500
201 8056449663 8056447290 Bacteria 7680491
202 Ga0307405_10941592
203 JGI25406J46586_10081078
204 JGI25406J46586_10090043
205 rootL2_10060310
206 Ga0070658_10208737
207 Ga0070683_100645379
208 Ga0070680_100013092
209 Ga0070682_100368879
210 Ga0070660_100263099
211 Ga0070659_100139133
212 Ga0070681_10746098
213 Ga0070679_100130723
214 Ga0070679_100690512
215 Ga0070684_100038138
216 Ga0068853_100282389
217 Ga0070665_100455594
218 Ga0070664_100166136
219 Ga0068857_100020708
220 Ga0068856_100319275
221 Ga0068864_100466720
222 Ga0081539_10001325
223 Ga0075363_100065908
224 Ga0075364_10296220
225 Ga0075364_10330560
226 Ga0075362_10064985
227 Ga0075370_10194475
228 Ga0105243_11013838
229 Ga0105241_11245427
230 Ga0105239_10919807
231 Ga0157370_10093331
232 Ga0157369_10027367
233 Ga0157369_10108709
234 Ga0157372_10115457
235 Ga0163163_10041706
236 Ga0206356_10886283
237 Ga0206353_12002608
238 Ga0224712_10033566
239 Ga0207705_10227079
240 Ga0207705_10669274
241 Ga0207707_10054109
242 Ga0207707_10278089
243 Ga0207660_10034915
244 Ga0207657_10547529
245 Ga0207649_10149018
246 Ga0207652_10046733
247 Ga0207690_10057409
248 Ga0207709_10484919
249 Ga0207661_10031504
250 Ga0207661_10197129
251 Ga0207679_10180216
252 Ga0207679_10310517
253 Ga0207667_10421406
254 Ga0207676_10120224
255 Ga0207674_10011828
256 Ga0207674_10061182
257 Ga0268266_10173448
258 Ga0307408_100244682
259 Ga0307405_10696851
260 Ga0307413_10628731
261 Ga0307413_10782999
262 Ga0307410_10046750
263 Ga0307410_10626576
264 Ga0326468_10000008
265 Ga0307409_100062511
266 Ga0307409_100172580
267 Ga0307409_100883624
268 Ga0307416_100114787
269 Ga0307414_11453193
270 Ga0307415_100206489
271 Ga0307415_100677422
272 Ga0451853_0233764
273 Ga0439449_0084164
274 Ga0439463_066649
275 Ga0450901_014511
276 Ga0466965_0002464
277 Ga0466965_0117307
278 Ga0466966_0217114
279 Ga0466963_0028076
280 Ga0466963_0035013
281 Ga0466963_0146987
282 Ga0466964_0096484
283 Ga0466968_0005570
284 Ga0466957_0646599
285 Ga0466960_0004455
286 Ga0466967_0120230
287 Ga0466967_0153761
288 Ga0466967_0275682
289 Ga0466967_0515993
290 Ga0495603_0221440
291 Ga0495618_0626384
292 Ga0495588_0268378
293 Ga0495676_0985830
294 Ga0495685_023417
295 Ga0496108_0229058
296 Ga0496110_0273242
297 Ga0496112_0021386
298 Ga0496126_0106938
299 Ga0501031_0076234
300 Ga0501032_0110461
301 Ga0501034_0027451
302 Ga0501034_0079331
303 Ga0501034_1423547
304 Ga0501036_0129971
305 Ga0501037_0033714
306 Ga0501037_0384237
307 Ga0501038_0123600
308 Ga0501038_0832265
309 Ga0501040_0034037
310 Ga0501041_0090013
311 Ga0501042_0174772
312 Ga0501043_0088908
313 Ga0501046_0119770
314 Ga0501047_0006104
315 Ga0501047_0077525
316 Ga0501048_0397031
317 Ga0501067_0010945
318 Ga0501068_0005462
319 Ga0501069_0033394
320 Ga0501070_0629244
321 Ga0501071_0017648
322 Ga0501072_0047425
323 Ga0501073_0041639
324 Ga0501074_0234972
325 Ga0501076_0045720
326 Ga0501077_0496491
327 Ga0501079_0119786
328 Ga0501083_0039256
329 Ga0501035_0049002
330 Ga0501044_0181227
331 Ga0501044_0567790
332 Ga0501044_0705773
333 nmdc:mga03683_34513_c1
334 nmdc:mga00v17_253833_c1
335 nmdc:mga00v17_463650_c1
336 nmdc:mga07m45_422464_c1
337 Ga0501082_0116748
338 Ga0530510_0562776
339 2501945521
340 2515495375
341 2515720164
342 2515759115
343 2516086246
344 2516092180
345 2547405524
346 2554257382
347 2585302813
348 2623585332
349 2643759612
350 2644267501
351 2644462973
352 2644630347
353 2676493552
354 2772645382
355 2819693808
356 2831939967
357 2832010096
358 2855675931
359 2855677137
360 2855687510
361 2856859260
362 2857289380
363 2858850172
364 2858872208
365 2858884806
366 2858892173
367 2858900288
368 2858902668
369 2866068077
370 2867305998
371 2867317206
372 2867323023
373 2867432753
374 2867510623
375 2869053664
376 2869064315
377 2869072269
378 2873152319
379 2873316182
380 2875392158
381 2880494899
382 2880497442
383 2884697431
384 2895452938
385 2902584555
386 2912718879
387 2929226007
388 2929232666
389 2946072851
390 2966603443
391 2996221991
392 3006494015
393 649812872
394 8003832428
395 8003860271
396 8003875567
397 8023627804
398 8054704243
399 8054731658
400 8054739900
401 8055413513
402 8056449663

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03013

Pyr_excise

Pyrimidine dimer DNA glycosylase

22

104

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zp4-assembly1.cif.gz_A sars-cov-2 nsp1 bound to a human 43s preinitiation ribosome complex - state 2 0.3892 19 131
8ppl-assembly1.cif.gz_Iu mers-cov nsp1 bound to the human 43s pre-initiation complex 0.3405 2 139
6q9i-assembly1.cif.gz_A aspartyl/asparaginyl beta-hydroxylase (asph) h679a in complex with factor x peptide fragment (39mer-4ser) 0.2784 10 131
8ppl-assembly1.cif.gz_Iu mers-cov nsp1 bound to the human 43s pre-initiation complex 0.2613 2 139
6zp4-assembly1.cif.gz_A sars-cov-2 nsp1 bound to a human 43s preinitiation ribosome complex - state 2 0.2571 19 131
ID Description Score Start End Superfamily
af_Q5RHM6_184_424_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.39 6 108 2.60.40.10
af_Q4CSJ0_1_138_1.25.40.90 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.3794 9 129 1.25.40.90
af_A0A1D6N5I5_20_286_1.10.3730.20 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold; 0.3587 2 94 1.10.3730.20
af_D3Z8P8_7_99_1.20.870.10 Mainly Alpha;Up-down Bundle;Son of sevenless (SoS) protein; Chain S, domain 1;Son of sevenless (SoS) protein Chain: S domain 1 0.3396 26 108 1.20.870.10
af_A0A368UK95_328_432_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3259 17 106 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A100XID4-F1-model_v4 Putative cytoplasmic protein 0.9948 1 155
AF-A0A4R7THT6-F1-model_v4 Cytoplasmic protein 0.9926 1 153
AF-A0A1H1L9S2-F1-model_v4 Cytoplasmic protein 0.9925 1 153
AF-A0A1A2DZ15-F1-model_v4 Cytoplasmic protein 0.9919 1 155
AF-A0A0H3D9E8-F1-model_v4 Cytoplasmic protein 0.9919 2 155

Map