F308494

General Info

Members Datasets Scaffolds Average Seq Length
201 125 402 262

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10035629|Ga0157370_100356293
Length 283
Sequence VIVPALTWLYVPADRPDRVEKAIASRAHAVIVDLEDGVPAGAKRKARANVAALLAGGHDKPVFVRINAGDEADLELVGRLSLSGVVVPKVERPEDVPAGLAVHALVESARGVEAAFEIASHPGVHGISLGEADLRSQTGALEAGLDWPRARIVNAAVAAGLPRPPQSVYPHIRDLEGLTRSCRRGRELGHLGRAAIHPDQLEPIEHAFLPRQSEVDAARATVEKIEGAGAGTIDGGAFVDPAMLGAARSVLALADAYGVAPSSGCHGPTVVSIVPWPQHRSRP

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
79 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
80 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
81 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
82 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
83 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
84 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
88 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
95 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.01
Metatranscriptomes 2.99
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.96
Rhizosphere 91.54
Stem 0
Stem Tuber 0
Unclassified 6.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10035629 3300013104 Bacteria 4834
2 JGI25406J46586_10012640 3300003203 Bacteria 3653
3 Ga0070658_10005425 3300005327 Bacteria 10345
4 Ga0070658_10314169 3300005327 Bacteria 1337
5 Ga0070680_100016501 3300005336 Bacteria 5811
6 Ga0070680_100184839 3300005336 Bacteria 1755
7 Ga0068868_100141680 3300005338 Bacteria 1974
8 Ga0070660_100003160 3300005339 Bacteria 11316
9 Ga0070660_100005641 3300005339 Bacteria 8672
10 Ga0070660_100087918 3300005339 Bacteria 2446
11 Ga0070661_100008733 3300005344 Bacteria 7012
12 Ga0070675_100030331 3300005354 Bacteria 4366
13 Ga0070675_100186099 3300005354 Bacteria 1797
14 Ga0070674_100024248 3300005356 Bacteria 3935
15 Ga0070674_100145044 3300005356 Bacteria 1786
16 Ga0070674_100374211 3300005356 Unclassified 1157
17 Ga0070659_100021506 3300005366 Bacteria 4914
18 Ga0070659_100308475 3300005366 Bacteria 1321
19 Ga0070714_100223161 3300005435 Unclassified 1733
20 Ga0070710_10106462 3300005437 Bacteria 1678
21 Ga0070694_100083917 3300005444 Bacteria 2221
22 Ga0070708_100181984 3300005445 Bacteria 1965
23 Ga0070681_10012097 3300005458 Bacteria 8557
24 Ga0070681_10043990 3300005458 Bacteria 4469
25 Ga0070681_10063035 3300005458 Bacteria 3680
26 Ga0070681_10106752 3300005458 Bacteria 2742
27 Ga0070681_10171801 3300005458 Bacteria 2089
28 Ga0070681_10303955 3300005458 Bacteria 1505
29 Ga0068867_100045893 3300005459 Bacteria 3207
30 Ga0068867_100353672 3300005459 Bacteria 1227
31 Ga0070706_100239528 3300005467 Bacteria 1694
32 Ga0070699_100335517 3300005518 Bacteria 1360
33 Ga0070679_100007223 3300005530 Bacteria 10374
34 Ga0070679_100069871 3300005530 Bacteria 3503
35 Ga0070679_100099014 3300005530 Bacteria 2903
36 Ga0070684_100015528 3300005535 Bacteria 6204
37 Ga0070672_100290228 3300005543 Bacteria 1385
38 Ga0070665_100023297 3300005548 Bacteria 6235
39 Ga0068855_100026751 3300005563 Bacteria 6903
40 Ga0068855_100056596 3300005563 Bacteria 4600
41 Ga0068855_100583726 3300005563 Bacteria 1207
42 Ga0070664_100229441 3300005564 Bacteria 1664
43 Ga0068857_100343918 3300005577 Bacteria 1380
44 Ga0068854_100197066 3300005578 Bacteria 1581
45 Ga0068856_100031959 3300005614 Bacteria 5151
46 Ga0068856_100074785 3300005614 Archaea 3354
47 Ga0081539_10000840 3300005985 Bacteria 58916
48 Ga0070712_100020503 3300006175 Bacteria 4326
49 Ga0068865_100148606 3300006881 Bacteria 1775
50 Ga0105240_10140921 3300009093 Bacteria 2883
51 Ga0105245_10097925 3300009098 Bacteria 2709
52 Ga0105245_10149215 3300009098 Bacteria 2209
53 Ga0105245_10181537 3300009098 Bacteria 2011
54 Ga0105245_10561069 3300009098 Bacteria 1165
55 Ga0105243_10249847 3300009148 Bacteria 1583
56 Ga0105242_10155048 3300009176 Bacteria 2000
57 Ga0105237_10078290 3300009545 Bacteria 3295
58 Ga0105238_10064672 3300009551 Bacteria 3657
59 Ga0105239_10355076 3300010375 Unclassified 1655
60 Ga0105239_10802205 3300010375 Unclassified 1079
61 Ga0157370_10393005 3300013104 Bacteria 1277
62 Ga0157369_10092973 3300013105 Bacteria 3220
63 Ga0157369_10277517 3300013105 Bacteria 1745
64 Ga0157374_10316778 3300013296 Unclassified 1545
65 Ga0157374_10410924 3300013296 Bacteria 1351
66 Ga0157372_10370126 3300013307 Bacteria 1670
67 Ga0157375_10149369 3300013308 Bacteria 2470
68 Ga0157380_10005684 3300014326 Bacteria 8723
69 Ga0157380_10091506 3300014326 Bacteria 2511
70 Ga0157376_10093074 3300014969 Bacteria 2616
71 Ga0197907_10876437 3300020069 Bacteria 1512
72 Ga0206356_11466077 3300020070 Bacteria 1353
73 Ga0206354_10772334 3300020081 Bacteria 2347
74 Ga0206354_11142522 3300020081 Bacteria 1500
75 Ga0206353_10706193 3300020082 Bacteria 10329
76 Ga0206353_11178799 3300020082 Bacteria 5790
77 Ga0207705_10018111 3300025909 Bacteria 5036
78 Ga0207705_10267881 3300025909 Bacteria 1306
79 Ga0207705_10434063 3300025909 Unclassified 1018
80 Ga0207707_10043320 3300025912 Bacteria 3926
81 Ga0207707_10057652 3300025912 Bacteria 3380
82 Ga0207707_10178127 3300025912 Bacteria 1856
83 Ga0207707_10183610 3300025912 Bacteria 1825
84 Ga0207707_10253409 3300025912 Bacteria 1529
85 Ga0207695_10328009 3300025913 Bacteria 1419
86 Ga0207693_10031609 3300025915 Bacteria 4183
87 Ga0207660_10056125 3300025917 Bacteria 2817
88 Ga0207660_10175336 3300025917 Bacteria 1662
89 Ga0207657_10000199 3300025919 Bacteria 62376
90 Ga0207657_10006239 3300025919 Bacteria 12392
91 Ga0207657_10054698 3300025919 Archaea 3450
92 Ga0207657_10151462 3300025919 Bacteria 1889
93 Ga0207657_10167335 3300025919 Bacteria 1782
94 Ga0207652_10082407 3300025921 Bacteria 2815
95 Ga0207652_10088966 3300025921 Bacteria 2710
96 Ga0207652_10194135 3300025921 Bacteria 1826
97 Ga0207646_10272314 3300025922 Unclassified 1530
98 Ga0207659_10226416 3300025926 Bacteria 1506
99 Ga0207664_10270869 3300025929 Bacteria 1487
100 Ga0207644_10057080 3300025931 Bacteria 2818
101 Ga0207690_10347415 3300025932 Bacteria 1172
102 Ga0207709_10334925 3300025935 Bacteria 1137
103 Ga0207669_10167599 3300025937 Bacteria 1559
104 Ga0207704_10134832 3300025938 Bacteria 1717
105 Ga0207691_10104175 3300025940 Bacteria 2529
106 Ga0207667_10115308 3300025949 Bacteria 2769
107 Ga0207667_10150965 3300025949 Bacteria 2391
108 Ga0207667_10221730 3300025949 Bacteria 1937
109 Ga0207667_10847853 3300025949 Bacteria 908
110 Ga0207677_10544444 3300026023 Unclassified 1011
111 Ga0207678_10100248 3300026067 Bacteria 2474
112 Ga0207702_10701052 3300026078 Bacteria 998
113 Ga0207648_10160043 3300026089 Unclassified 1988
114 Ga0207698_10052378 3300026142 Bacteria 3127
115 Ga0268266_10083597 3300028379 Bacteria 2787
116 Ga0307408_100486396 3300031548 Bacteria 1078
117 Ga0307409_100524100 3300031995 Bacteria 1158
118 Ga0395900_0022432 3300037418 Bacteria 6457
119 Ga0395900_0101528 3300037418 Bacteria 2955
120 Ga0395898_0502619 3300037466 Bacteria 1153
121 Ga0395898_0667421 3300037466 Bacteria 982
122 Ga0395905_0029132 3300037471 Bacteria 5204
123 Ga0395905_0063516 3300037471 Bacteria 3455
124 Ga0395905_0106052 3300037471 Bacteria 2638
125 Ga0395901_0018538 3300038443 Bacteria 7105
126 Ga0395901_0105420 3300038443 Bacteria 2959
127 Ga0395901_0165096 3300038443 Bacteria 2325
128 Ga0436365_1105011 3300039437 Bacteria 1806
129 Ga0439438_007297 3300041405 Bacteria 3791
130 Ga0439439_0014037 3300041406 Bacteria 1947
131 Ga0439453_0039103 3300041408 Bacteria 925
132 Ga0439461_0005518 3300041410 Bacteria 2158
133 Ga0439466_0084313 3300041411 Bacteria 1000
134 Ga0439446_0001231 3300042156 Bacteria 5737
135 Ga0450918_009946 3300042531 Bacteria 1663
136 Ga0466961_0009755 3300044693 Bacteria 6111
137 Ga0466961_0011146 3300044693 Bacteria 5746
138 Ga0466963_0000605 3300044694 Bacteria 17157
139 Ga0466963_0041971 3300044694 Bacteria 3002
140 Ga0466963_0067676 3300044694 Bacteria 2397
141 Ga0466963_0162075 3300044694 Bacteria 1556
142 Ga0466964_0013540 3300044706 Archaea 3094
143 Ga0466964_0110845 3300044706 Bacteria 1223
144 Ga0466971_0000533 3300044719 Bacteria 15074
145 Ga0466957_0013899 3300044842 Bacteria 4679
146 Ga0466957_0207843 3300044842 Unclassified 1288
147 Ga0466959_0017743 3300045049 Bacteria 5220
148 Ga0466959_0034370 3300045049 Bacteria 3749
149 Ga0466958_0009401 3300045836 Bacteria 5447
150 Ga0466958_0015312 3300045836 Bacteria 4393
151 Ga0466967_0001032 3300045976 Bacteria 15276
152 Ga0466967_0018452 3300045976 Bacteria 5576
153 Ga0466967_0083205 3300045976 Bacteria 2893
154 Ga0466967_0087498 3300045976 Bacteria 2825
155 Ga0466967_0099702 3300045976 Bacteria 2653
156 Ga0466967_0101770 3300045976 Bacteria 2626
157 Ga0466967_0287974 3300045976 Unclassified 1577
158 Ga0466967_0307791 3300045976 Bacteria 1525
159 Ga0466967_0330453 3300045976 Bacteria 1472
160 Ga0466967_0499745 3300045976 Bacteria 1193
161 Ga0495592_0119149 3300046454 Bacteria 1859
162 Ga0495582_0079429 3300046473 Bacteria 1821
163 Ga0495605_0088241 3300046474 Bacteria 1441
164 Ga0495608_0007832 3300046511 Bacteria 7515
165 Ga0495628_0029018 3300046516 Bacteria 4491
166 Ga0495630_0015963 3300046517 Bacteria 5486
167 Ga0495630_0038907 3300046517 Bacteria 3557
168 Ga0495640_0010119 3300046533 Bacteria 7310
169 Ga0495656_0028050 3300046615 Bacteria 2255
170 Ga0495634_0102206 3300046642 Bacteria 1851
171 Ga0495599_0041468 3300046678 Bacteria 2890
172 Ga0495613_0023864 3300046689 Bacteria 4558
173 Ga0495674_0004180 3300047319 Bacteria 13921
174 Ga0495680_0008020 3300047322 Bacteria 9629
175 Ga0495680_0394713 3300047322 Bacteria 956
176 Ga0495684_0030267 3300047471 Bacteria 4157
177 Ga0495602_0158781 3300048088 Bacteria 1768
178 Ga0496101_0004851 3300048904 Bacteria 8531
179 Ga0496102_0025958 3300048905 Bacteria 5220
180 Ga0496103_0050186 3300048906 Bacteria 2581
181 Ga0496104_0001577 3300048907 Bacteria 19614
182 Ga0496104_0231443 3300048907 Bacteria 1760
183 Ga0496104_0322716 3300048907 Bacteria 1457
184 Ga0496106_0002197 3300048909 Bacteria 14586
185 Ga0496107_0003411 3300048910 Bacteria 10628
186 Ga0496107_0393418 3300048910 Unclassified 1031
187 Ga0496109_0070086 3300048912 Bacteria 3217
188 Ga0496110_0050867 3300048913 Bacteria 3640
189 Ga0496111_0250047 3300048914 Unclassified 1316
190 Ga0496112_0183775 3300048915 Bacteria 2054
191 Ga0496114_0010898 3300048917 Bacteria 7243
192 Ga0496114_0011624 3300048917 Bacteria 7040
193 Ga0496114_0053787 3300048917 Bacteria 3356
194 Ga0501047_0067703 3300049581 Bacteria 3440
195 Ga0501047_0135889 3300049581 Bacteria 2339
196 Ga0501067_0002966 3300049583 Bacteria 9361
197 Ga0501069_0166940 3300049585 Bacteria 1269
198 Ga0501071_0115982 3300049587 Bacteria 1982
199 Ga0501081_0139303 3300049743 Bacteria 1738
200 Ga0495619_0146536 3300053085 Bacteria 1628
201 Ga0466962_0001101 3300061719 Bacteria 12437
202 Ga0157370_10035629
203 JGI25406J46586_10012640
204 Ga0070658_10005425
205 Ga0070658_10314169
206 Ga0070680_100016501
207 Ga0070680_100184839
208 Ga0068868_100141680
209 Ga0070660_100003160
210 Ga0070660_100005641
211 Ga0070660_100087918
212 Ga0070661_100008733
213 Ga0070675_100030331
214 Ga0070675_100186099
215 Ga0070674_100024248
216 Ga0070674_100145044
217 Ga0070674_100374211
218 Ga0070659_100021506
219 Ga0070659_100308475
220 Ga0070714_100223161
221 Ga0070710_10106462
222 Ga0070694_100083917
223 Ga0070708_100181984
224 Ga0070681_10012097
225 Ga0070681_10043990
226 Ga0070681_10063035
227 Ga0070681_10106752
228 Ga0070681_10171801
229 Ga0070681_10303955
230 Ga0068867_100045893
231 Ga0068867_100353672
232 Ga0070706_100239528
233 Ga0070699_100335517
234 Ga0070679_100007223
235 Ga0070679_100069871
236 Ga0070679_100099014
237 Ga0070684_100015528
238 Ga0070672_100290228
239 Ga0070665_100023297
240 Ga0068855_100026751
241 Ga0068855_100056596
242 Ga0068855_100583726
243 Ga0070664_100229441
244 Ga0068857_100343918
245 Ga0068854_100197066
246 Ga0068856_100031959
247 Ga0068856_100074785
248 Ga0081539_10000840
249 Ga0070712_100020503
250 Ga0068865_100148606
251 Ga0105240_10140921
252 Ga0105245_10097925
253 Ga0105245_10149215
254 Ga0105245_10181537
255 Ga0105245_10561069
256 Ga0105243_10249847
257 Ga0105242_10155048
258 Ga0105237_10078290
259 Ga0105238_10064672
260 Ga0105239_10355076
261 Ga0105239_10802205
262 Ga0157370_10393005
263 Ga0157369_10092973
264 Ga0157369_10277517
265 Ga0157374_10316778
266 Ga0157374_10410924
267 Ga0157372_10370126
268 Ga0157375_10149369
269 Ga0157380_10005684
270 Ga0157380_10091506
271 Ga0157376_10093074
272 Ga0197907_10876437
273 Ga0206356_11466077
274 Ga0206354_10772334
275 Ga0206354_11142522
276 Ga0206353_10706193
277 Ga0206353_11178799
278 Ga0207705_10018111
279 Ga0207705_10267881
280 Ga0207705_10434063
281 Ga0207707_10043320
282 Ga0207707_10057652
283 Ga0207707_10178127
284 Ga0207707_10183610
285 Ga0207707_10253409
286 Ga0207695_10328009
287 Ga0207693_10031609
288 Ga0207660_10056125
289 Ga0207660_10175336
290 Ga0207657_10000199
291 Ga0207657_10006239
292 Ga0207657_10054698
293 Ga0207657_10151462
294 Ga0207657_10167335
295 Ga0207652_10082407
296 Ga0207652_10088966
297 Ga0207652_10194135
298 Ga0207646_10272314
299 Ga0207659_10226416
300 Ga0207664_10270869
301 Ga0207644_10057080
302 Ga0207690_10347415
303 Ga0207709_10334925
304 Ga0207669_10167599
305 Ga0207704_10134832
306 Ga0207691_10104175
307 Ga0207667_10115308
308 Ga0207667_10150965
309 Ga0207667_10221730
310 Ga0207667_10847853
311 Ga0207677_10544444
312 Ga0207678_10100248
313 Ga0207702_10701052
314 Ga0207648_10160043
315 Ga0207698_10052378
316 Ga0268266_10083597
317 Ga0307408_100486396
318 Ga0307409_100524100
319 Ga0395900_0022432
320 Ga0395900_0101528
321 Ga0395898_0502619
322 Ga0395898_0667421
323 Ga0395905_0029132
324 Ga0395905_0063516
325 Ga0395905_0106052
326 Ga0395901_0018538
327 Ga0395901_0105420
328 Ga0395901_0165096
329 Ga0436365_1105011
330 Ga0439438_007297
331 Ga0439439_0014037
332 Ga0439453_0039103
333 Ga0439461_0005518
334 Ga0439466_0084313
335 Ga0439446_0001231
336 Ga0450918_009946
337 Ga0466961_0009755
338 Ga0466961_0011146
339 Ga0466963_0000605
340 Ga0466963_0041971
341 Ga0466963_0067676
342 Ga0466963_0162075
343 Ga0466964_0013540
344 Ga0466964_0110845
345 Ga0466971_0000533
346 Ga0466957_0013899
347 Ga0466957_0207843
348 Ga0466959_0017743
349 Ga0466959_0034370
350 Ga0466958_0009401
351 Ga0466958_0015312
352 Ga0466967_0001032
353 Ga0466967_0018452
354 Ga0466967_0083205
355 Ga0466967_0087498
356 Ga0466967_0099702
357 Ga0466967_0101770
358 Ga0466967_0287974
359 Ga0466967_0307791
360 Ga0466967_0330453
361 Ga0466967_0499745
362 Ga0495592_0119149
363 Ga0495582_0079429
364 Ga0495605_0088241
365 Ga0495608_0007832
366 Ga0495628_0029018
367 Ga0495630_0015963
368 Ga0495630_0038907
369 Ga0495640_0010119
370 Ga0495656_0028050
371 Ga0495634_0102206
372 Ga0495599_0041468
373 Ga0495613_0023864
374 Ga0495674_0004180
375 Ga0495680_0008020
376 Ga0495680_0394713
377 Ga0495684_0030267
378 Ga0495602_0158781
379 Ga0496101_0004851
380 Ga0496102_0025958
381 Ga0496103_0050186
382 Ga0496104_0001577
383 Ga0496104_0231443
384 Ga0496104_0322716
385 Ga0496106_0002197
386 Ga0496107_0003411
387 Ga0496107_0393418
388 Ga0496109_0070086
389 Ga0496110_0050867
390 Ga0496111_0250047
391 Ga0496112_0183775
392 Ga0496114_0010898
393 Ga0496114_0011624
394 Ga0496114_0053787
395 Ga0501047_0067703
396 Ga0501047_0135889
397 Ga0501067_0002966
398 Ga0501069_0166940
399 Ga0501071_0115982
400 Ga0501081_0139303
401 Ga0495619_0146536
402 Ga0466962_0001101

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03328

HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase family

6

100

0.9

PF03328

HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase family

97

198

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u5v-assembly1.cif.gz_A structure of cite complexed with triphosphate group of atp form mycobacterium tuberculosis 0.9024 7 208
1z6k-assembly1.cif.gz_A citrate lyase beta subunit complexed with oxaloacetate and magnesium from m. tuberculosis 0.9022 6 210
4l9y-assembly1.cif.gz_B crystal structure of rhodobacter sphaeroides malyl-coa lyase in complex with magnesium, glyoxylate, and propionyl-coa 0.8984 1 210
1u5h-assembly1.cif.gz_A structure of citrate lyase beta subunit from mycobacterium tuberculosis 0.8928 7 208
6chu-assembly1.cif.gz_A crystal structure of protein cite from mycobacterium tuberculosis in complex with magnesium and acetate 0.8846 7 212
ID Description Score Start End Superfamily
af_P0A9I1_3_299_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9129 7 258 3.20.20.60
af_Q54Q74_39_346_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9069 7 255 3.20.20.60
4l9yB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8984 1 210 3.20.20.60
af_P0A9I1_3_299_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8829 7 258 3.20.20.60
af_E9AH59_149_482_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8821 3 255 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A0L8MCA6-F1-model_v4 deleted 0.9758 101 256
AF-D6KAN1-F1-model_v4 Citrate lyase subunit beta 0.9747 101 257 GO:0000287
GO:0006107
GO:0016829
AF-A0A0J6XFR5-F1-model_v4 Citrate lyase subunit beta 0.9688 4 220 GO:0000287
GO:0006107
GO:0016829
AF-A0A6G2VY21-F1-model_v4 HpcH/HpaI aldolase/citrate lyase family protein 0.9688 113 256 GO:0000287
GO:0006107
GO:0016829
AF-A0A7W9NW45-F1-model_v4 deleted 0.9671 4 256

Map