F308197
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 168 | 178 | 321 |
Family's Representative Sequence
| Representative Sequence | 3300005439|Ga0070711_100214051|Ga0070711_1002140511 |
| Length | 367 |
| Sequence | MRVVVTGGAGFIGSHLCERLIERGDDVVCVDHLSSGRLDNVAALRRSNRFAFLAQDVTAGIAVTGPVDAVAHLASPASPPHYLRRPLETLAAGSRGTENALRLAHEHGARFVLASTSEVYGDPQVHPQTEDYWGNVNPIGPRSVYDEAKRYAEAVTSAYRRTLDVNTGIVRIFNTYGPRMRADDGRVVSSFLVQALCGEPLTIYGNGAQTRSFCYVDDLVAGLLAMLDSDESGPVNFGNPQERTVAELAALVCEVTGAQVPIEFHAMPQDDPLQRRPDIGRARERFGWSPRVGIEEGLRRTAAWFAAQPEEISAAIASLRGGQLGEAPPQGPARSAAASLVPAARIGRAERETELDDTRDSDVRIGA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237090 | Mesorhizobium sp. WSM3224 | Isolate | Nodule |
| 2 | 2517572101 | Frankia sp. DC12 | Isolate | Nodule |
| 3 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 4 | 2582581306 | Rhizobium sp. YR295 | Isolate | Rhizosphere |
| 5 | 2582581865 | Rhizobium sp. CF258 | Isolate | Rhizosphere |
| 6 | 2582581866 | Rhizobium sp. CF097 | Isolate | Rhizosphere |
| 7 | 2643221600 | Flavobacterium sp. Root186 | Isolate | Unclassified |
| 8 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 9 | 2854681122 | Luteovulum sphaeroides SCJ | Isolate | Unclassified |
| 10 | 2876377896 | Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 | Isolate | Nodule |
| 11 | 2889010040 | Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 | Isolate | Nodule |
| 12 | 2896429255 | Sphingomonas rhizophila KACC 19189 | Isolate | Rhizosphere |
| 13 | 2904690495 | Bradyrhizobium ivorense CI-1B | Isolate | Nodule |
| 14 | 2906354277 | Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 | Isolate | Nodule |
| 15 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 16 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 17 | 2919191525 | Flavobacterium sp. 2755 | Isolate | Rhizosphere |
| 18 | 2977942078 | Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 | Isolate | Nodule |
| 19 | 2987652177 | Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 | Isolate | Nodule |
| 20 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 21 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 22 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 23 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 26 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 32 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 34 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 36 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 39 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 40 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 41 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 42 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 45 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 75 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 76 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 77 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 78 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 79 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 80 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 81 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 82 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 83 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 84 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 85 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 86 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 87 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 88 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 89 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 90 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 91 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 92 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 93 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 94 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 95 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 96 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 97 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 98 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 99 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 100 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 101 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 102 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 103 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 104 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 105 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 128 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 129 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 130 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 131 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 132 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 133 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 134 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 135 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 136 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049762 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control | Metagenome | Rhizosphere |
| 145 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 147 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 148 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 150 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 154 | 3300053099 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere | Metagenome | Endosphere |
| 155 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 156 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 157 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 158 | 3300053137 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere | Metagenome | Endosphere |
| 159 | 3300053143 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere | Metagenome | Endosphere |
| 160 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 161 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 162 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 163 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 164 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
| 165 | 639633007 | Azoarcus olearius BH72 | Isolate | Unclassified |
| 166 | 8004640170 | Mesorhizobium sp. GbtcB19 | Isolate | Unclassified |
| 167 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 168 | 8054307821 | Flavobacterium soyae SCIV07 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.56 |
| Metatranscriptomes | 0 |
| Isolates | 11.44 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.46 |
| Nodule | 3.98 |
| Rhizoplane | 4.98 |
| Rhizosphere | 75.62 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10026155 | 3300001979 | Bacteria | 1958 |
| 2 | JGI25165J46597_1000007 | 3300003214 | Bacteria | 518996 |
| 3 | Ga0065707_10095238 | 3300005295 | Bacteria | 3401 |
| 4 | Ga0070658_10042643 | 3300005327 | Bacteria | 3665 |
| 5 | Ga0070658_10108092 | 3300005327 | Unclassified | 2302 |
| 6 | Ga0070668_100080019 | 3300005347 | Bacteria | 2559 |
| 7 | Ga0070668_100196858 | 3300005347 | Bacteria | 1653 |
| 8 | Ga0070688_100039957 | 3300005365 | Bacteria | 2873 |
| 9 | Ga0070714_100013748 | 3300005435 | Bacteria | 6491 |
| 10 | Ga0070714_100022103 | 3300005435 | Bacteria | 5212 |
| 11 | Ga0070713_100320376 | 3300005436 | Bacteria | 1432 |
| 12 | Ga0070711_100214051 | 3300005439 | Bacteria | 1494 |
| 13 | Ga0070708_100075508 | 3300005445 | Bacteria | 3042 |
| 14 | Ga0070708_100078076 | 3300005445 | Bacteria | 2993 |
| 15 | Ga0070663_100255463 | 3300005455 | Unclassified | 1388 |
| 16 | Ga0070707_100212664 | 3300005468 | Bacteria | 1884 |
| 17 | Ga0070698_100001733 | 3300005471 | Bacteria | 24322 |
| 18 | Ga0070698_100080502 | 3300005471 | Unclassified | 3252 |
| 19 | Ga0070679_100014896 | 3300005530 | Bacteria | 7468 |
| 20 | Ga0070697_100027591 | 3300005536 | Bacteria | 4544 |
| 21 | Ga0070697_100156902 | 3300005536 | Bacteria | 1921 |
| 22 | Ga0070686_100046152 | 3300005544 | Bacteria | 2747 |
| 23 | Ga0070696_100022458 | 3300005546 | Bacteria | 4286 |
| 24 | Ga0070696_100262294 | 3300005546 | Unclassified | 1310 |
| 25 | Ga0070665_100085582 | 3300005548 | Unclassified | 3158 |
| 26 | Ga0068852_100001590 | 3300005616 | Bacteria | 15452 |
| 27 | Ga0068859_100033051 | 3300005617 | Bacteria | 5196 |
| 28 | Ga0068858_100001870 | 3300005842 | Bacteria | 21482 |
| 29 | Ga0068858_100027896 | 3300005842 | Bacteria | 5245 |
| 30 | Ga0068860_100387291 | 3300005843 | Bacteria | 1381 |
| 31 | Ga0097621_100098203 | 3300006237 | Bacteria | 2460 |
| 32 | Ga0075428_100403481 | 3300006844 | Bacteria | 1465 |
| 33 | Ga0075431_100001090 | 3300006847 | Bacteria | 24311 |
| 34 | Ga0075434_100008079 | 3300006871 | Bacteria | 9758 |
| 35 | Ga0097620_100033051 | 3300006931 | Bacteria | 5196 |
| 36 | Ga0111539_10040268 | 3300009094 | Bacteria | 5627 |
| 37 | Ga0105245_10000253 | 3300009098 | Bacteria | 50973 |
| 38 | Ga0105248_10072236 | 3300009177 | Bacteria | 3878 |
| 39 | Ga0105248_10079767 | 3300009177 | Bacteria | 3678 |
| 40 | Ga0105238_10276925 | 3300009551 | Bacteria | 1659 |
| 41 | Ga0157370_10005555 | 3300013104 | Bacteria | 14133 |
| 42 | Ga0163162_10373308 | 3300013306 | Bacteria | 1559 |
| 43 | Ga0157375_10104462 | 3300013308 | Bacteria | 2922 |
| 44 | Ga0157376_10130847 | 3300014969 | Bacteria | 2239 |
| 45 | Ga0207705_10033758 | 3300025909 | Bacteria | 3656 |
| 46 | Ga0207705_10085183 | 3300025909 | Bacteria | 2308 |
| 47 | Ga0207684_10041151 | 3300025910 | Bacteria | 3919 |
| 48 | Ga0207657_10003239 | 3300025919 | Bacteria | 17425 |
| 49 | Ga0207652_10011842 | 3300025921 | Bacteria | 7036 |
| 50 | Ga0207646_10000254 | 3300025922 | Bacteria | 72539 |
| 51 | Ga0207646_10093213 | 3300025922 | Bacteria | 2697 |
| 52 | Ga0207694_10063907 | 3300025924 | Bacteria | 2867 |
| 53 | Ga0207687_10000449 | 3300025927 | Bacteria | 28037 |
| 54 | Ga0207664_10010054 | 3300025929 | Bacteria | 6667 |
| 55 | Ga0207686_10136606 | 3300025934 | Bacteria | 1689 |
| 56 | Ga0207669_10217122 | 3300025937 | Unclassified | 1400 |
| 57 | Ga0207711_10048512 | 3300025941 | Bacteria | 3632 |
| 58 | Ga0207711_10061231 | 3300025941 | Bacteria | 3245 |
| 59 | Ga0207703_10001126 | 3300026035 | Bacteria | 25229 |
| 60 | Ga0207703_10019876 | 3300026035 | Bacteria | 5249 |
| 61 | Ga0207639_10043668 | 3300026041 | Bacteria | 3367 |
| 62 | Ga0207639_10044141 | 3300026041 | Bacteria | 3351 |
| 63 | Ga0207639_10117149 | 3300026041 | Bacteria | 2182 |
| 64 | Ga0207678_10000069 | 3300026067 | Bacteria | 81395 |
| 65 | Ga0207702_10433954 | 3300026078 | Bacteria | 1272 |
| 66 | Ga0207641_10367557 | 3300026088 | Bacteria | 1375 |
| 67 | Ga0207698_10025122 | 3300026142 | Bacteria | 4191 |
| 68 | Ga0268265_10295092 | 3300028380 | Bacteria | 1457 |
| 69 | Ga0268265_10578842 | 3300028380 | Bacteria | 1070 |
| 70 | Ga0268264_10068621 | 3300028381 | Bacteria | 2997 |
| 71 | Ga0307517_10036641 | 3300028786 | Bacteria | 5507 |
| 72 | Ga0307515_10001271 | 3300028794 | Bacteria | 57323 |
| 73 | Ga0265338_10067976 | 3300028800 | Bacteria | 3073 |
| 74 | Ga0316176_1110050 | 3300030732 | Bacteria | 9148 |
| 75 | Ga0265330_10026472 | 3300031235 | Bacteria | 2623 |
| 76 | Ga0307408_100232580 | 3300031548 | Bacteria | 1510 |
| 77 | Ga0307508_10020637 | 3300031616 | Bacteria | 5983 |
| 78 | Ga0307412_10090710 | 3300031911 | Bacteria | 2137 |
| 79 | Ga0307409_100086479 | 3300031995 | Bacteria | 2552 |
| 80 | Ga0307409_100131963 | 3300031995 | Bacteria | 2136 |
| 81 | Ga0307416_100313994 | 3300032002 | Bacteria | 1565 |
| 82 | Ga0307414_10000024 | 3300032004 | Bacteria | 205727 |
| 83 | Ga0373956_0040468 | 3300035119 | Bacteria | 2067 |
| 84 | Ga0373957_0039571 | 3300035120 | Bacteria | 1769 |
| 85 | Ga0316574_0055529 | 3300035398 | Bacteria | 2475 |
| 86 | Ga0373933_0024003 | 3300035724 | Bacteria | 3490 |
| 87 | Ga0373937_0016309 | 3300036401 | Bacteria | 6595 |
| 88 | Ga0373937_0118312 | 3300036401 | Bacteria | 2468 |
| 89 | Ga0316582_0069593 | 3300036647 | Bacteria | 2275 |
| 90 | Ga0316582_0151115 | 3300036647 | Bacteria | 1570 |
| 91 | Ga0316582_0160898 | 3300036647 | Bacteria | 1521 |
| 92 | Ga0316584_0141312 | 3300036712 | Bacteria | 1795 |
| 93 | Ga0316584_0282875 | 3300036712 | Bacteria | 1205 |
| 94 | Ga0395900_0122683 | 3300037418 | Bacteria | 2665 |
| 95 | Ga0395905_0093160 | 3300037471 | Bacteria | 2825 |
| 96 | Ga0436363_0860776 | 3300039450 | Bacteria | 1432 |
| 97 | Ga0451793_0056641 | 3300041452 | Bacteria | 3168 |
| 98 | Ga0466972_0019042 | 3300044658 | Bacteria | 3432 |
| 99 | Ga0466965_0020864 | 3300044683 | Bacteria | 3153 |
| 100 | Ga0466961_0146670 | 3300044693 | Bacteria | 1475 |
| 101 | Ga0466963_0020906 | 3300044694 | Bacteria | 4122 |
| 102 | Ga0453684_0003179 | 3300044712 | Bacteria | 37677 |
| 103 | Ga0453684_0246206 | 3300044712 | Unclassified | 2055 |
| 104 | Ga0466970_0003751 | 3300044765 | Bacteria | 7431 |
| 105 | Ga0466957_0019294 | 3300044842 | Bacteria | 4010 |
| 106 | Ga0466957_0024363 | 3300044842 | Bacteria | 3581 |
| 107 | Ga0466959_0002238 | 3300045049 | Bacteria | 12325 |
| 108 | Ga0466967_0124166 | 3300045976 | Bacteria | 2389 |
| 109 | Ga0495592_0042927 | 3300046454 | Bacteria | 3386 |
| 110 | Ga0495638_0000228 | 3300046460 | Bacteria | 76924 |
| 111 | Ga0495638_0019375 | 3300046460 | Bacteria | 4502 |
| 112 | Ga0495651_0002196 | 3300046462 | Bacteria | 15056 |
| 113 | Ga0495580_0009638 | 3300046472 | Bacteria | 7584 |
| 114 | Ga0495582_0144268 | 3300046473 | Bacteria | 1350 |
| 115 | Ga0495607_0021381 | 3300046501 | Bacteria | 4072 |
| 116 | Ga0495643_0000662 | 3300046522 | Bacteria | 40568 |
| 117 | Ga0495643_0023226 | 3300046522 | Bacteria | 3527 |
| 118 | Ga0495643_0105375 | 3300046522 | Bacteria | 1440 |
| 119 | Ga0495652_0020503 | 3300046529 | Bacteria | 5877 |
| 120 | Ga0495609_0057594 | 3300046538 | Bacteria | 1720 |
| 121 | Ga0495667_0011924 | 3300046559 | Bacteria | 5890 |
| 122 | Ga0495625_0000054 | 3300046660 | Bacteria | 187599 |
| 123 | Ga0495657_0043157 | 3300046675 | Bacteria | 3076 |
| 124 | Ga0495623_0014963 | 3300046679 | Bacteria | 5015 |
| 125 | Ga0495600_0028010 | 3300046809 | Bacteria | 3644 |
| 126 | Ga0495660_0004157 | 3300046810 | Bacteria | 8808 |
| 127 | Ga0495680_0039252 | 3300047322 | Bacteria | 3778 |
| 128 | Ga0495683_0021274 | 3300047323 | Bacteria | 3343 |
| 129 | Ga0495685_000766 | 3300047447 | Bacteria | 9813 |
| 130 | Ga0495673_0000195 | 3300047469 | Bacteria | 95428 |
| 131 | Ga0495681_0000194 | 3300047470 | Bacteria | 51439 |
| 132 | Ga0495686_0189890 | 3300047472 | Bacteria | 1185 |
| 133 | Ga0496101_0002187 | 3300048904 | Bacteria | 11940 |
| 134 | Ga0496104_0005300 | 3300048907 | Bacteria | 11279 |
| 135 | Ga0496105_0001233 | 3300048908 | Bacteria | 17845 |
| 136 | Ga0496106_0002948 | 3300048909 | Bacteria | 12665 |
| 137 | Ga0496107_0007900 | 3300048910 | Bacteria | 7343 |
| 138 | Ga0496114_0000114 | 3300048917 | Bacteria | 58128 |
| 139 | Ga0496114_0237307 | 3300048917 | Bacteria | 1603 |
| 140 | Ga0496114_0353775 | 3300048917 | Bacteria | 1299 |
| 141 | Ga0496115_0001510 | 3300048918 | Bacteria | 16718 |
| 142 | Ga0496122_0014165 | 3300048925 | Bacteria | 7732 |
| 143 | Ga0496123_0001339 | 3300048926 | Bacteria | 34831 |
| 144 | Ga0496126_0003389 | 3300048929 | Bacteria | 20170 |
| 145 | Ga0501038_0001841 | 3300049574 | Bacteria | 19618 |
| 146 | Ga0501042_0010975 | 3300049578 | Bacteria | 6098 |
| 147 | Ga0501043_0002309 | 3300049579 | Bacteria | 16149 |
| 148 | Ga0501043_0018300 | 3300049579 | Bacteria | 5494 |
| 149 | Ga0501047_0016712 | 3300049581 | Bacteria | 7009 |
| 150 | Ga0501047_0055980 | 3300049581 | Bacteria | 3813 |
| 151 | Ga0501048_0020558 | 3300049582 | Bacteria | 4838 |
| 152 | Ga0501073_0088397 | 3300049589 | Bacteria | 2154 |
| 153 | Ga0501074_0025960 | 3300049590 | Bacteria | 4248 |
| 154 | Ga0501077_0076299 | 3300049593 | Bacteria | 2123 |
| 155 | Ga0501265_000682 | 3300049762 | Bacteria | 3705 |
| 156 | Ga0501044_0029241 | 3300049823 | Bacteria | 5812 |
| 157 | Ga0501044_0099948 | 3300049823 | Bacteria | 2919 |
| 158 | nmdc:mga0k408_57050_c1 | 3300050493 | Bacteria | 2267 |
| 159 | nmdc:mga0k408_8272_c1 | 3300050493 | Bacteria | 5581 |
| 160 | nmdc:mga07m45_16828_c1 | 3300050496 | Bacteria | 3918 |
| 161 | nmdc:mga06r32_5430_c1 | 3300050510 | Bacteria | 11471 |
| 162 | nmdc:mga08y16_45310_c1 | 3300050511 | Bacteria | 4608 |
| 163 | nmdc:mga0n895_6072_c1 | 3300050512 | Bacteria | 10188 |
| 164 | nmdc:mga0rr50_182915_c1 | 3300050513 | Bacteria | 1714 |
| 165 | nmdc:mga08x19_5077_c1 | 3300050514 | Bacteria | 7784 |
| 166 | Ga0500578_0004495 | 3300053086 | Bacteria | 9797 |
| 167 | Ga0500654_014792 | 3300053099 | Bacteria | 5186 |
| 168 | Ga0500569_018566 | 3300053109 | Bacteria | 1798 |
| 169 | Ga0500652_000976 | 3300053131 | Bacteria | 9431 |
| 170 | Ga0500658_0008847 | 3300053134 | Bacteria | 3715 |
| 171 | Ga0500561_0000475 | 3300053137 | Bacteria | 6512 |
| 172 | Ga0500579_092536 | 3300053143 | Bacteria | 1623 |
| 173 | Ga0500600_0000247 | 3300053149 | Bacteria | 21891 |
| 174 | Ga0500616_0001751 | 3300053153 | Bacteria | 19900 |
| 175 | Ga0500616_0009416 | 3300053153 | Bacteria | 5942 |
| 176 | Ga0500633_0004774 | 3300053160 | Bacteria | 3150 |
| 177 | Ga0500634_0001489 | 3300053161 | Bacteria | 9156 |
| 178 | Ga0500587_000099 | 3300053739 | Bacteria | 7600 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2876377896 | 2876380693 | 253 |
| 2 | 3300050493 | nmdc:mga0k408_8272_c1 | nmdc:mga0k408_8272_c1_49_873 | 265 |
| 3 | iso_pu_bacteria | 2906354277 | 2906356692 | 265 |
| 4 | 3300036712 | Ga0316584_0282875 | Ga0316584_0282875_384_1190 | 268 |
| 5 | 3300049823 | Ga0501044_0029241 | Ga0501044_0029241_12_890 | 285 |
| 6 | iso_pu_bacteria | 2854681122 | 2854681664 | 294 |
| 7 | 3300044712 | Ga0453684_0003179 | Ga0453684_0003179_23000_23941 | 299 |
| 8 | 3300044712 | Ga0453684_0246206 | Ga0453684_0246206_973_1914 | 299 |
| 9 | 3300046522 | Ga0495643_0105375 | Ga0495643_0105375_260_1165 | 301 |
| 10 | iso_pu_bacteria | 2889010040 | 2889012273 | 302 |
| 11 | 3300005435 | Ga0070714_100022103 | Ga0070714_1000221033 | 306 |
| 12 | 3300044694 | Ga0466963_0020906 | Ga0466963_0020906_1964_2950 | 306 |
| 13 | 3300044842 | Ga0466957_0024363 | Ga0466957_0024363_2400_3386 | 306 |
| 14 | iso_pu_bacteria | 2977942078 | 2977948791 | 306 |
| 15 | iso_pu_bacteria | 2987652177 | 2987659143 | 306 |
| 16 | 3300036647 | Ga0316582_0069593 | Ga0316582_0069593_1300_2235 | 307 |
| 17 | 3300036647 | Ga0316582_0160898 | Ga0316582_0160898_199_1152 | 307 |
| 18 | 3300048917 | Ga0496114_0353775 | Ga0496114_0353775_347_1270 | 307 |
| 19 | 3300050512 | nmdc:mga0n895_6072_c1 | nmdc:mga0n895_6072_c1_154_1083 | 307 |
| 20 | 3300050514 | nmdc:mga08x19_5077_c1 | nmdc:mga08x19_5077_c1_3105_4034 | 307 |
| 21 | iso_pu_bacteria | 2513237090 | 2513611834 | 307 |
| 22 | 3300005536 | Ga0070697_100027591 | Ga0070697_1000275913 | 308 |
| 23 | 3300005842 | Ga0068858_100001870 | Ga0068858_10000187015 | 308 |
| 24 | 3300009098 | Ga0105245_10000253 | Ga0105245_1000025343 | 308 |
| 25 | 3300009551 | Ga0105238_10276925 | Ga0105238_102769252 | 308 |
| 26 | 3300013306 | Ga0163162_10373308 | Ga0163162_103733082 | 308 |
| 27 | 3300025927 | Ga0207687_10000449 | Ga0207687_1000044919 | 308 |
| 28 | 3300026035 | Ga0207703_10001126 | Ga0207703_100011269 | 308 |
| 29 | 3300026041 | Ga0207639_10117149 | Ga0207639_101171492 | 308 |
| 30 | 3300041452 | Ga0451793_0056641 | Ga0451793_0056641_105_1031 | 308 |
| 31 | 3300046460 | Ga0495638_0000228 | Ga0495638_0000228_55087_56013 | 308 |
| 32 | 3300046538 | Ga0495609_0057594 | Ga0495609_0057594_745_1701 | 308 |
| 33 | 3300046660 | Ga0495625_0000054 | Ga0495625_0000054_158315_159241 | 308 |
| 34 | 3300048929 | Ga0496126_0003389 | Ga0496126_0003389_7090_8028 | 308 |
| 35 | 3300053153 | Ga0500616_0009416 | Ga0500616_0009416_756_1682 | 308 |
| 36 | iso_pu_bacteria | 2517572101 | 2517762931 | 308 |
| 37 | iso_pu_bacteria | 2643221600 | 2644010165 | 308 |
| 38 | iso_pu_bacteria | 2919191525 | 2919191708 | 308 |
| 39 | iso_pu_bacteria | 8053945823 | 8053945989 | 308 |
| 40 | iso_pu_bacteria | 8054307821 | 8054308385 | 308 |
| 41 | 3300005295 | Ga0065707_10095238 | Ga0065707_100952382 | 309 |
| 42 | 3300005365 | Ga0070688_100039957 | Ga0070688_1000399572 | 309 |
| 43 | 3300005439 | Ga0070711_100214051 | Ga0070711_1002140511 | 309 |
| 44 | 3300005445 | Ga0070708_100075508 | Ga0070708_1000755082 | 309 |
| 45 | 3300005455 | Ga0070663_100255463 | Ga0070663_1002554632 | 309 |
| 46 | 3300005471 | Ga0070698_100080502 | Ga0070698_1000805024 | 309 |
| 47 | 3300005544 | Ga0070686_100046152 | Ga0070686_1000461522 | 309 |
| 48 | 3300005546 | Ga0070696_100022458 | Ga0070696_1000224582 | 309 |
| 49 | 3300005546 | Ga0070696_100262294 | Ga0070696_1002622941 | 309 |
| 50 | 3300005548 | Ga0070665_100085582 | Ga0070665_1000855824 | 309 |
| 51 | 3300006237 | Ga0097621_100098203 | Ga0097621_1000982032 | 309 |
| 52 | 3300006844 | Ga0075428_100403481 | Ga0075428_1004034812 | 309 |
| 53 | 3300006847 | Ga0075431_100001090 | Ga0075431_10000109014 | 309 |
| 54 | 3300013308 | Ga0157375_10104462 | Ga0157375_101044622 | 309 |
| 55 | 3300014969 | Ga0157376_10130847 | Ga0157376_101308471 | 309 |
| 56 | 3300025922 | Ga0207646_10093213 | Ga0207646_100932133 | 309 |
| 57 | 3300025934 | Ga0207686_10136606 | Ga0207686_101366062 | 309 |
| 58 | 3300025937 | Ga0207669_10217122 | Ga0207669_102171222 | 309 |
| 59 | 3300025941 | Ga0207711_10048512 | Ga0207711_100485123 | 309 |
| 60 | 3300028786 | Ga0307517_10036641 | Ga0307517_100366415 | 309 |
| 61 | 3300031616 | Ga0307508_10020637 | Ga0307508_100206372 | 309 |
| 62 | 3300035398 | Ga0316574_0055529 | Ga0316574_0055529_1066_2007 | 309 |
| 63 | 3300036401 | Ga0373937_0118312 | Ga0373937_0118312_1368_2327 | 309 |
| 64 | 3300044658 | Ga0466972_0019042 | Ga0466972_0019042_827_1774 | 309 |
| 65 | 3300044683 | Ga0466965_0020864 | Ga0466965_0020864_1743_2690 | 309 |
| 66 | 3300044693 | Ga0466961_0146670 | Ga0466961_0146670_135_1082 | 309 |
| 67 | 3300044765 | Ga0466970_0003751 | Ga0466970_0003751_3746_4693 | 309 |
| 68 | 3300044842 | Ga0466957_0019294 | Ga0466957_0019294_1773_2720 | 309 |
| 69 | 3300045049 | Ga0466959_0002238 | Ga0466959_0002238_8353_9300 | 309 |
| 70 | 3300046460 | Ga0495638_0019375 | Ga0495638_0019375_2750_3754 | 309 |
| 71 | 3300046501 | Ga0495607_0021381 | Ga0495607_0021381_309_1313 | 309 |
| 72 | 3300046522 | Ga0495643_0000662 | Ga0495643_0000662_9797_10801 | 309 |
| 73 | 3300046810 | Ga0495660_0004157 | Ga0495660_0004157_6081_7085 | 309 |
| 74 | 3300047323 | Ga0495683_0021274 | Ga0495683_0021274_604_1608 | 309 |
| 75 | 3300047447 | Ga0495685_000766 | Ga0495685_000766_4918_5922 | 309 |
| 76 | 3300047470 | Ga0495681_0000194 | Ga0495681_0000194_20417_21421 | 309 |
| 77 | 3300047472 | Ga0495686_0189890 | Ga0495686_0189890_133_1137 | 309 |
| 78 | 3300048904 | Ga0496101_0002187 | Ga0496101_0002187_1637_2584 | 309 |
| 79 | 3300048907 | Ga0496104_0005300 | Ga0496104_0005300_2173_3120 | 309 |
| 80 | 3300048908 | Ga0496105_0001233 | Ga0496105_0001233_9540_10487 | 309 |
| 81 | 3300048909 | Ga0496106_0002948 | Ga0496106_0002948_4191_5138 | 309 |
| 82 | 3300048910 | Ga0496107_0007900 | Ga0496107_0007900_5238_6185 | 309 |
| 83 | 3300048917 | Ga0496114_0000114 | Ga0496114_0000114_26915_27862 | 309 |
| 84 | 3300048918 | Ga0496115_0001510 | Ga0496115_0001510_4910_5857 | 309 |
| 85 | 3300050510 | nmdc:mga06r32_5430_c1 | nmdc:mga06r32_5430_c1_4837_5781 | 309 |
| 86 | 3300053086 | Ga0500578_0004495 | Ga0500578_0004495_3893_4897 | 309 |
| 87 | 3300053099 | Ga0500654_014792 | Ga0500654_014792_1588_2592 | 309 |
| 88 | 3300053109 | Ga0500569_018566 | Ga0500569_018566_497_1501 | 309 |
| 89 | 3300053131 | Ga0500652_000976 | Ga0500652_000976_1735_2739 | 309 |
| 90 | 3300053134 | Ga0500658_0008847 | Ga0500658_0008847_1037_2041 | 309 |
| 91 | 3300053137 | Ga0500561_0000475 | Ga0500561_0000475_3776_4780 | 309 |
| 92 | 3300053143 | Ga0500579_092536 | Ga0500579_092536_315_1319 | 309 |
| 93 | 3300053149 | Ga0500600_0000247 | Ga0500600_0000247_5469_6473 | 309 |
| 94 | 3300053153 | Ga0500616_0001751 | Ga0500616_0001751_15703_16707 | 309 |
| 95 | 3300053160 | Ga0500633_0004774 | Ga0500633_0004774_1208_2212 | 309 |
| 96 | 3300053161 | Ga0500634_0001489 | Ga0500634_0001489_4890_5894 | 309 |
| 97 | 3300053739 | Ga0500587_000099 | Ga0500587_000099_6291_7295 | 309 |
| 98 | iso_pu_bacteria | 2773857758 | 2774378596 | 309 |
| 99 | iso_pu_bacteria | 2908678064 | 2908678692 | 309 |
| 100 | iso_pu_bacteria | 2919069694 | 2919071043 | 309 |
| 101 | 3300005435 | Ga0070714_100013748 | Ga0070714_1000137482 | 310 |
| 102 | 3300006871 | Ga0075434_100008079 | Ga0075434_1000080799 | 310 |
| 103 | 3300025929 | Ga0207664_10010054 | Ga0207664_100100545 | 310 |
| 104 | 3300032004 | Ga0307414_10000024 | Ga0307414_1000002456 | 310 |
| 105 | 3300035119 | Ga0373956_0040468 | Ga0373956_0040468_663_1601 | 310 |
| 106 | 3300035120 | Ga0373957_0039571 | Ga0373957_0039571_643_1581 | 310 |
| 107 | 3300035724 | Ga0373933_0024003 | Ga0373933_0024003_664_1602 | 310 |
| 108 | 3300036401 | Ga0373937_0016309 | Ga0373937_0016309_4357_5295 | 310 |
| 109 | 3300036647 | Ga0316582_0151115 | Ga0316582_0151115_42_1007 | 310 |
| 110 | 3300036712 | Ga0316584_0141312 | Ga0316584_0141312_294_1259 | 310 |
| 111 | 3300046454 | Ga0495592_0042927 | Ga0495592_0042927_376_1314 | 310 |
| 112 | 3300046462 | Ga0495651_0002196 | Ga0495651_0002196_13703_14641 | 310 |
| 113 | 3300046472 | Ga0495580_0009638 | Ga0495580_0009638_180_1118 | 310 |
| 114 | 3300046529 | Ga0495652_0020503 | Ga0495652_0020503_2919_3857 | 310 |
| 115 | 3300046559 | Ga0495667_0011924 | Ga0495667_0011924_3931_4869 | 310 |
| 116 | 3300046675 | Ga0495657_0043157 | Ga0495657_0043157_976_1914 | 310 |
| 117 | 3300046679 | Ga0495623_0014963 | Ga0495623_0014963_3211_4149 | 310 |
| 118 | 3300046809 | Ga0495600_0028010 | Ga0495600_0028010_1468_2406 | 310 |
| 119 | 3300047322 | Ga0495680_0039252 | Ga0495680_0039252_1641_2579 | 310 |
| 120 | iso_pu_bacteria | 8004640170 | 8004642807 | 310 |
| 121 | 3300009094 | Ga0111539_10040268 | Ga0111539_100402683 | 311 |
| 122 | 3300026067 | Ga0207678_10000069 | Ga0207678_1000006953 | 311 |
| 123 | 3300028800 | Ga0265338_10067976 | Ga0265338_100679763 | 311 |
| 124 | 3300039450 | Ga0436363_0860776 | Ga0436363_0860776_174_1181 | 311 |
| 125 | 3300046473 | Ga0495582_0144268 | Ga0495582_0144268_365_1300 | 311 |
| 126 | 3300048917 | Ga0496114_0237307 | Ga0496114_0237307_534_1496 | 311 |
| 127 | 3300049574 | Ga0501038_0001841 | Ga0501038_0001841_5598_6566 | 311 |
| 128 | 3300049578 | Ga0501042_0010975 | Ga0501042_0010975_2092_3060 | 311 |
| 129 | 3300049579 | Ga0501043_0002309 | Ga0501043_0002309_12868_13836 | 311 |
| 130 | 3300049581 | Ga0501047_0016712 | Ga0501047_0016712_2831_3799 | 311 |
| 131 | 3300049582 | Ga0501048_0020558 | Ga0501048_0020558_3702_4670 | 311 |
| 132 | 3300049589 | Ga0501073_0088397 | Ga0501073_0088397_775_1743 | 311 |
| 133 | 3300049590 | Ga0501074_0025960 | Ga0501074_0025960_1609_2577 | 311 |
| 134 | 3300049823 | Ga0501044_0099948 | Ga0501044_0099948_1045_2013 | 311 |
| 135 | 3300050511 | nmdc:mga08y16_45310_c1 | nmdc:mga08y16_45310_c1_1465_2424 | 311 |
| 136 | 3300013104 | Ga0157370_10005555 | Ga0157370_1000555510 | 312 |
| 137 | 3300028380 | Ga0268265_10295092 | Ga0268265_102950922 | 312 |
| 138 | 3300049581 | Ga0501047_0055980 | Ga0501047_0055980_2595_3551 | 312 |
| 139 | 3300049593 | Ga0501077_0076299 | Ga0501077_0076299_786_1742 | 312 |
| 140 | 3300005327 | Ga0070658_10108092 | Ga0070658_101080921 | 313 |
| 141 | 3300025909 | Ga0207705_10085183 | Ga0207705_100851832 | 313 |
| 142 | 3300047469 | Ga0495673_0000195 | Ga0495673_0000195_88825_89790 | 313 |
| 143 | iso_pu_bacteria | 2522572158 | 2523102408 | 313 |
| 144 | iso_pu_bacteria | 639633007 | 639786949 | 313 |
| 145 | 3300005347 | Ga0070668_100196858 | Ga0070668_1001968582 | 314 |
| 146 | iso_pu_bacteria | 2896429255 | 2896429580 | 314 |
| 147 | 3300031548 | Ga0307408_100232580 | Ga0307408_1002325801 | 315 |
| 148 | 3300031995 | Ga0307409_100131963 | Ga0307409_1001319632 | 315 |
| 149 | 3300031235 | Ga0265330_10026472 | Ga0265330_100264722 | 316 |
| 150 | 3300005347 | Ga0070668_100080019 | Ga0070668_1000800191 | 317 |
| 151 | 3300005436 | Ga0070713_100320376 | Ga0070713_1003203762 | 317 |
| 152 | 3300005617 | Ga0068859_100033051 | Ga0068859_1000330512 | 317 |
| 153 | 3300005842 | Ga0068858_100027896 | Ga0068858_1000278963 | 317 |
| 154 | 3300006931 | Ga0097620_100033051 | Ga0097620_1000330516 | 317 |
| 155 | 3300009177 | Ga0105248_10079767 | Ga0105248_100797673 | 317 |
| 156 | 3300025941 | Ga0207711_10061231 | Ga0207711_100612312 | 317 |
| 157 | 3300026035 | Ga0207703_10019876 | Ga0207703_100198764 | 317 |
| 158 | 3300028380 | Ga0268265_10578842 | Ga0268265_105788421 | 317 |
| 159 | 3300031911 | Ga0307412_10090710 | Ga0307412_100907102 | 317 |
| 160 | 3300032002 | Ga0307416_100313994 | Ga0307416_1003139942 | 317 |
| 161 | 3300037471 | Ga0395905_0093160 | Ga0395905_0093160_1712_2671 | 317 |
| 162 | 3300005327 | Ga0070658_10042643 | Ga0070658_100426433 | 318 |
| 163 | 3300005445 | Ga0070708_100078076 | Ga0070708_1000780762 | 318 |
| 164 | 3300005468 | Ga0070707_100212664 | Ga0070707_1002126642 | 318 |
| 165 | 3300005471 | Ga0070698_100001733 | Ga0070698_10000173313 | 318 |
| 166 | 3300005530 | Ga0070679_100014896 | Ga0070679_1000148962 | 318 |
| 167 | 3300005536 | Ga0070697_100156902 | Ga0070697_1001569022 | 318 |
| 168 | 3300025909 | Ga0207705_10033758 | Ga0207705_100337582 | 318 |
| 169 | 3300025910 | Ga0207684_10041151 | Ga0207684_100411512 | 318 |
| 170 | 3300025921 | Ga0207652_10011842 | Ga0207652_100118424 | 318 |
| 171 | 3300025922 | Ga0207646_10000254 | Ga0207646_1000025415 | 318 |
| 172 | 3300026088 | Ga0207641_10367557 | Ga0207641_103675572 | 318 |
| 173 | 3300030732 | Ga0316176_1110050 | Ga0316176_11100508 | 318 |
| 174 | 3300005616 | Ga0068852_100001590 | Ga0068852_10000159013 | 319 |
| 175 | 3300005843 | Ga0068860_100387291 | Ga0068860_1003872912 | 319 |
| 176 | 3300025924 | Ga0207694_10063907 | Ga0207694_100639072 | 319 |
| 177 | 3300026041 | Ga0207639_10044141 | Ga0207639_100441412 | 319 |
| 178 | 3300026078 | Ga0207702_10433954 | Ga0207702_104339541 | 319 |
| 179 | 3300026142 | Ga0207698_10025122 | Ga0207698_100251221 | 319 |
| 180 | 3300028381 | Ga0268264_10068621 | Ga0268264_100686212 | 319 |
| 181 | 3300045976 | Ga0466967_0124166 | Ga0466967_0124166_1302_2261 | 319 |
| 182 | 3300049579 | Ga0501043_0018300 | Ga0501043_0018300_1260_2261 | 320 |
| 183 | 3300048925 | Ga0496122_0014165 | Ga0496122_0014165_6010_6999 | 321 |
| 184 | 3300048926 | Ga0496123_0001339 | Ga0496123_0001339_1805_2794 | 321 |
| 185 | 3300050513 | nmdc:mga0rr50_182915_c1 | nmdc:mga0rr50_182915_c1_525_1580 | 324 |
| 186 | 3300026041 | Ga0207639_10043668 | Ga0207639_100436682 | 325 |
| 187 | 3300046522 | Ga0495643_0023226 | Ga0495643_0023226_653_1681 | 326 |
| 188 | 3300050493 | nmdc:mga0k408_57050_c1 | nmdc:mga0k408_57050_c1_814_1842 | 326 |
| 189 | 3300050496 | nmdc:mga07m45_16828_c1 | nmdc:mga07m45_16828_c1_376_1404 | 326 |
| 190 | iso_pu_bacteria | 2582581306 | 2585269560 | 327 |
| 191 | iso_pu_bacteria | 2582581865 | 2585385472 | 327 |
| 192 | iso_pu_bacteria | 2582581866 | 2585392224 | 327 |
| 193 | 3300028794 | Ga0307515_10001271 | Ga0307515_1000127135 | 328 |
| 194 | 3300031995 | Ga0307409_100086479 | Ga0307409_1000864791 | 328 |
| 195 | 3300025919 | Ga0207657_10003239 | Ga0207657_100032397 | 329 |
| 196 | 3300037418 | Ga0395900_0122683 | Ga0395900_0122683_952_1965 | 330 |
| 197 | iso_pu_bacteria | 2904690495 | 2904690792 | 330 |
| 198 | 3300003214 | JGI25165J46597_1000007 | JGI25165J46597_1000007405 | 334 |
| 199 | 3300009177 | Ga0105248_10072236 | Ga0105248_100722362 | 338 |
| 200 | 3300049762 | Ga0501265_000682 | Ga0501265_000682_453_1586 | 346 |
| 201 | 3300001979 | JGI24740J21852_10026155 | JGI24740J21852_100261552 | 348 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4m55-assembly1.cif.gz_E | crystal structure of human udp-xylose synthase r236h substitution | 0.9787 | 39 | 273 |
| 2b69-assembly1.cif.gz_A | crystal structure of human udp-glucoronic acid decarboxylase | 0.9756 | 37 | 344 |
| 4m55-assembly1.cif.gz_D | crystal structure of human udp-xylose synthase r236h substitution | 0.9707 | 37 | 342 |
| 4lk3-assembly1.cif.gz_E | crystal structure of human udp-xylose synthase r236a substitution | 0.9664 | 37 | 344 |
| 4lk3-assembly1.cif.gz_C | crystal structure of human udp-xylose synthase r236a substitution | 0.966 | 37 | 344 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_B7ZXP4_113_239_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9948 | 37 | 161 | 3.40.50.720 |
| af_Q4E0S3_8_323_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9812 | 39 | 345 | 3.40.50.720 |
| 4m55E00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9787 | 39 | 273 | 3.40.50.720 |
| 2b69A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.976 | 37 | 326 | 3.40.50.720 |
| af_A0A1D6N7M5_279_504_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.974 | 125 | 345 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7C2R0T9-F1-model_v4 | UDP-glucuronate decarboxylase (EC 4.1.1.35) | 0.9988 | 38 | 144 |
GO:0005737
GO:0016020 GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A7C7WV11-F1-model_v4 | NAD-dependent epimerase/dehydratase family protein | 0.998 | 38 | 131 |
GO:0005737
GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A531KPR6-F1-model_v4 | SDR family oxidoreductase | 0.9942 | 37 | 273 |
GO:0005737
GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A3A9JKT6-F1-model_v4 | SDR family oxidoreductase | 0.9932 | 37 | 344 |
GO:0005737
GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A1V5J9I9-F1-model_v4 | UDP-glucuronate decarboxylase (EC 4.1.1.35) | 0.9931 | 37 | 344 |
GO:0005737
GO:0016020 GO:0016853 GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
Predicted Structure (AlphaFold2)
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