F308118

General Info

Members Datasets Scaffolds Average Seq Length
201 128 402 725

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100011648|Ga0070660_1000116485
Length 763
Sequence MSQLTEPTRTARVKRVVVGRPMSSGQMEETLLPKWLALPIFASDPLSSVAYATEATLVVLVAASATSLHLAFPISLAIASLLAIVVLSYRQTVLVYQSSGGAYIVAKENLGRLPSLVAAAALLTDYVLTVAVSVAAGVLALTSAVPSLSSHVLSLSVLCVVLISIANLRGVKEAGLVFALPTYTFVASIFALIGVGATKCATTGCPQATVSHPLTAGLGAVTTFVVLRAFASGSTALTGVEAIANGVNAFRKPQGKNAAATLAILGAIAITMFVGVSWLAVQMHARPSEGGTPSVLSEIARGVFPASSALGFMYWVVQVLTLAVLVLAANTSYQGFPRLAALLARDKFFPRQFTNLGDRLVFSNGIVVLTGISCALLWAYNASVDSLIHLYVIGVFTAFTLSQLGMVRYWWRTREAGWSRRIVINAIGASATGLVTAIVIWTKFAEGAWLVTVAIPLIVLMCLGINRHYRRFGRRLKAGIGAVQAAGKPTNEVLLAVEAIDVATEGALWYSRQILGGCKGLRAVLAPGPHTDPGIRPRWWDFAEAEPRLEVLPTTEGRMQAILEEVWRLPRGESDFVTVVVPEQFKRRSLLSAAGRGSFRLKLRLLSEPGVVVTDVPAVTQRRSPEGHAPKHLAVRVLLANVHAGSVRALNYAESLGVEDTRAVSFAIDEEESSRFLEEYTKAGLLLPVDLSAAPYRDIGTPLLAYIRELTEDPDTVVNIVMPEIVVRGWARFLHNQRALYIKRLLLFERHVILSSVPYQLFR

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
41 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
76 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
89 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
101 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
125 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
126 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
127 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
128 2862574272 Streptomyces sp. AcE210 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.52
Metatranscriptomes 1
Isolates 2.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.5
Rhizoplane 11.44
Rhizosphere 87.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100011648 3300005339 Bacteria 6260
2 Ga0070683_100002472 3300005329 Bacteria 14707
3 Ga0070683_100021670 3300005329 Bacteria 5737
4 Ga0070660_100013751 3300005339 Bacteria 5819
5 Ga0070660_100040391 3300005339 Bacteria 3550
6 Ga0070661_100007966 3300005344 Bacteria 7319
7 Ga0070675_100021924 3300005354 Bacteria 5104
8 Ga0070714_100012463 3300005435 Bacteria 6789
9 Ga0070713_100008835 3300005436 Bacteria 7173
10 Ga0070681_10001591 3300005458 Bacteria 20191
11 Ga0070681_10006990 3300005458 Bacteria 10986
12 Ga0070681_10012573 3300005458 Bacteria 8400
13 Ga0070681_10015213 3300005458 Bacteria 7653
14 Ga0070681_10016355 3300005458 Bacteria 7404
15 Ga0070681_10028165 3300005458 Bacteria 5648
16 Ga0070706_100003808 3300005467 Bacteria 14735
17 Ga0070707_100008398 3300005468 Bacteria 9589
18 Ga0070698_100016407 3300005471 Bacteria 7818
19 Ga0070699_100007283 3300005518 Bacteria 9630
20 Ga0070679_100019432 3300005530 Bacteria 6606
21 Ga0070679_100044128 3300005530 Bacteria 4442
22 Ga0070684_100001383 3300005535 Bacteria 17420
23 Ga0068857_100010502 3300005577 Bacteria 8048
24 Ga0068857_100036642 3300005577 Bacteria 4346
25 Ga0068856_100091882 3300005614 Bacteria 3019
26 Ga0070716_100016901 3300006173 Bacteria 3774
27 Ga0070712_100007701 3300006175 Bacteria 6737
28 Ga0105240_10003352 3300009093 Bacteria 24922
29 Ga0105240_10059366 3300009093 Bacteria 4774
30 Ga0105240_10067746 3300009093 Bacteria 4424
31 Ga0105237_10013082 3300009545 Bacteria 8713
32 Ga0105237_10013814 3300009545 Bacteria 8452
33 Ga0105239_10045777 3300010375 Bacteria 4795
34 Ga0157370_10004963 3300013104 Bacteria 15060
35 Ga0157370_10007863 3300013104 Bacteria 11555
36 Ga0157369_10002638 3300013105 Bacteria 21445
37 Ga0157369_10007653 3300013105 Bacteria 12426
38 Ga0157369_10040490 3300013105 Bacteria 5085
39 Ga0157369_10068721 3300013105 Bacteria 3806
40 Ga0157369_10125648 3300013105 Bacteria 2720
41 Ga0157372_10047791 3300013307 Bacteria 4756
42 Ga0157372_10070275 3300013307 Bacteria 3939
43 Ga0206353_10110582 3300020082 Bacteria 7089
44 Ga0206353_10920896 3300020082 Bacteria 5283
45 Ga0207699_10000139 3300025906 Bacteria 48832
46 Ga0207707_10001636 3300025912 Bacteria 20667
47 Ga0207707_10011399 3300025912 Bacteria 7741
48 Ga0207695_10016161 3300025913 Bacteria 8751
49 Ga0207693_10014528 3300025915 Bacteria 6328
50 Ga0207657_10000271 3300025919 Bacteria 55055
51 Ga0207657_10001734 3300025919 Bacteria 23503
52 Ga0207657_10038230 3300025919 Bacteria 4276
53 Ga0207657_10050548 3300025919 Bacteria 3618
54 Ga0207649_10019735 3300025920 Bacteria 3858
55 Ga0207652_10022244 3300025921 Bacteria 5242
56 Ga0207646_10004389 3300025922 Bacteria 15343
57 Ga0207700_10000530 3300025928 Bacteria 22429
58 Ga0207664_10013942 3300025929 Bacteria 5793
59 Ga0207665_10030121 3300025939 Bacteria 3587
60 Ga0207661_10014784 3300025944 Bacteria 5727
61 Ga0207667_10037500 3300025949 Bacteria 5180
62 Ga0207658_10009646 3300025986 Bacteria 6551
63 Ga0207674_10022473 3300026116 Bacteria 6771
64 Ga0207674_10024377 3300026116 Bacteria 6467
65 Ga0265319_1004812 3300028563 Bacteria 6613
66 Ga0265336_10000680 3300028666 Bacteria 18384
67 Ga0265338_10005891 3300028800 Bacteria 15808
68 Ga0265338_10006615 3300028800 Bacteria 14681
69 Ga0265338_10011671 3300028800 Bacteria 10119
70 Ga0265325_10007179 3300031241 Bacteria 6701
71 Ga0265327_10002344 3300031251 Bacteria 20191
72 Ga0265316_10004722 3300031344 Bacteria 13494
73 Ga0265313_10001477 3300031595 Bacteria 21902
74 Ga0265314_10007233 3300031711 Bacteria 9650
75 Ga0316576_10001010 3300031727 Bacteria 14517
76 Ga0316576_10023817 3300031727 Bacteria 4270
77 Ga0316576_10025003 3300031727 Bacteria 4177
78 Ga0373943_0014613 3300035170 Bacteria 3558
79 Ga0316574_0002700 3300035398 Bacteria 8976
80 Ga0316574_0025873 3300035398 Bacteria 3526
81 Ga0373947_0001683 3300035725 Bacteria 13546
82 Ga0373947_0044376 3300035725 Bacteria 2657
83 Ga0316584_0001391 3300036712 Bacteria 14429
84 Ga0316584_0009602 3300036712 Bacteria 6724
85 Ga0373925_0009985 3300037068 Bacteria 6893
86 Ga0395900_0058957 3300037418 Bacteria 3952
87 Ga0395898_0004839 3300037466 Bacteria 14637
88 Ga0395898_0166808 3300037466 Bacteria 2106
89 Ga0395901_0002250 3300038443 Bacteria 19691
90 Ga0395901_0006460 3300038443 Bacteria 11876
91 Ga0395901_0096717 3300038443 Bacteria 3094
92 Ga0466966_0035210 3300044684 Bacteria 3236
93 Ga0466961_0004938 3300044693 Bacteria 8384
94 Ga0466961_0021773 3300044693 Bacteria 4124
95 Ga0466963_0001586 3300044694 Bacteria 12353
96 Ga0466963_0003789 3300044694 Bacteria 8712
97 Ga0466963_0006120 3300044694 Bacteria 7096
98 Ga0466963_0025901 3300044694 Bacteria 3745
99 Ga0466964_0008100 3300044706 Bacteria 3941
100 Ga0466971_0000690 3300044719 Bacteria 13513
101 Ga0466957_0005266 3300044842 Bacteria 7245
102 Ga0466959_0003221 3300045049 Bacteria 10615
103 Ga0466959_0023689 3300045049 Bacteria 4544
104 Ga0466958_0002392 3300045836 Bacteria 9393
105 Ga0466958_0053935 3300045836 Bacteria 2437
106 Ga0466967_0002172 3300045976 Bacteria 12055
107 Ga0466967_0002211 3300045976 Bacteria 11962
108 Ga0466967_0006778 3300045976 Bacteria 8159
109 Ga0466967_0027074 3300045976 Bacteria 4763
110 Ga0466967_0121081 3300045976 Bacteria 2418
111 Ga0495629_0000322 3300046459 Bacteria 41005
112 Ga0495629_0049681 3300046459 Bacteria 2939
113 Ga0495641_0000172 3300046461 Bacteria 48876
114 Ga0495651_0011256 3300046462 Bacteria 6875
115 Ga0495651_0013773 3300046462 Bacteria 6253
116 Ga0495580_0061790 3300046472 Bacteria 2629
117 Ga0495582_0000293 3300046473 Bacteria 27593
118 Ga0495639_0000669 3300046475 Bacteria 15781
119 Ga0495662_0007791 3300046476 Bacteria 5272
120 Ga0495662_0008222 3300046476 Bacteria 5139
121 Ga0495662_0019729 3300046476 Bacteria 3261
122 Ga0495585_0040510 3300046492 Bacteria 2616
123 Ga0495630_0004985 3300046517 Bacteria 9340
124 Ga0495643_0004172 3300046522 Bacteria 10258
125 Ga0495642_0015396 3300046528 Bacteria 2973
126 Ga0495652_0038786 3300046529 Bacteria 4124
127 Ga0495609_0031555 3300046538 Bacteria 2407
128 Ga0495667_0019094 3300046559 Bacteria 4626
129 Ga0495634_0014554 3300046642 Bacteria 5670
130 Ga0495625_0038844 3300046660 Bacteria 3480
131 Ga0495635_0009181 3300046663 Bacteria 6905
132 Ga0495657_0002270 3300046675 Bacteria 16239
133 Ga0495657_0038730 3300046675 Bacteria 3279
134 Ga0495599_0033428 3300046678 Bacteria 3232
135 Ga0495658_0000583 3300046683 Bacteria 19945
136 Ga0495669_0001972 3300046684 Bacteria 8429
137 Ga0495613_0002165 3300046689 Bacteria 14898
138 Ga0495613_0010624 3300046689 Bacteria 6829
139 Ga0495613_0084816 3300046689 Bacteria 2299
140 Ga0495600_0035632 3300046809 Bacteria 3233
141 Ga0495600_0067488 3300046809 Bacteria 2338
142 Ga0495581_0001529 3300047315 Bacteria 12888
143 Ga0495604_0007706 3300047317 Bacteria 8530
144 Ga0495604_0033072 3300047317 Bacteria 4095
145 Ga0495604_0101652 3300047317 Bacteria 2111
146 Ga0495636_0003293 3300047318 Bacteria 6258
147 Ga0495674_0063474 3300047319 Bacteria 3213
148 Ga0495672_0042849 3300047320 Bacteria 2726
149 Ga0495676_0025869 3300047321 Bacteria 5058
150 Ga0495680_0005474 3300047322 Bacteria 11939
151 Ga0495680_0007676 3300047322 Bacteria 9850
152 Ga0495680_0010210 3300047322 Bacteria 8384
153 Ga0495687_002594 3300047443 Bacteria 14229
154 Ga0495675_0024927 3300047444 Bacteria 3815
155 Ga0495685_005462 3300047447 Bacteria 4151
156 Ga0495685_012954 3300047447 Bacteria 2827
157 Ga0495684_0002259 3300047471 Bacteria 15438
158 Ga0495684_0002946 3300047471 Bacteria 13414
159 Ga0495593_0005899 3300047673 Bacteria 7216
160 Ga0495614_0006376 3300048089 Bacteria 5297
161 Ga0496100_0001948 3300048903 Bacteria 10329
162 Ga0496101_0005006 3300048904 Bacteria 8416
163 Ga0496101_0009733 3300048904 Bacteria 6327
164 Ga0496102_0001373 3300048905 Bacteria 21702
165 Ga0496103_0037294 3300048906 Bacteria 2978
166 Ga0496104_0095929 3300048907 Bacteria 2837
167 Ga0496105_0000466 3300048908 Bacteria 26582
168 Ga0496106_0030085 3300048909 Bacteria 4049
169 Ga0496106_0037771 3300048909 Bacteria 3613
170 Ga0496107_0002960 3300048910 Bacteria 11247
171 Ga0496107_0006692 3300048910 Bacteria 7936
172 Ga0496107_0010989 3300048910 Bacteria 6300
173 Ga0496108_0003292 3300048911 Bacteria 12976
174 Ga0496109_0000847 3300048912 Bacteria 25593
175 Ga0496110_0006627 3300048913 Bacteria 9198
176 Ga0496110_0072783 3300048913 Bacteria 3050
177 Ga0496112_0021043 3300048915 Bacteria 6195
178 Ga0496112_0043695 3300048915 Bacteria 4388
179 Ga0496112_0051341 3300048915 Bacteria 4045
180 Ga0496114_0000954 3300048917 Bacteria 21635
181 Ga0496114_0061363 3300048917 Bacteria 3144
182 Ga0496115_0001782 3300048918 Bacteria 15400
183 Ga0496115_0034878 3300048918 Bacteria 3977
184 Ga0495678_021012 3300049459 Bacteria 2881
185 Ga0501070_0008954 3300049586 Bacteria 8465
186 Ga0501074_0028100 3300049590 Bacteria 4076
187 Ga0501080_0034173 3300049742 Bacteria 4745
188 Ga0495601_0016435 3300053077 Bacteria 4484
189 Ga0495595_0001746 3300053084 Bacteria 8502
190 Ga0495595_0004725 3300053084 Bacteria 5480
191 Ga0495595_0008825 3300053084 Bacteria 4151
192 Ga0495619_0001119 3300053085 Bacteria 17601
193 Ga0495619_0003090 3300053085 Bacteria 10812
194 Ga0495619_0014496 3300053085 Bacteria 4979
195 Ga0466962_0006402 3300061719 Bacteria 5652
196 Ga0466962_0006748 3300061719 Bacteria 5504
197 2585312699 2582581314 Bacteria 11452267
198 2616703234 2616644814 Bacteria 11555299
199 2811848360 2808606982 Bacteria 7791042
200 2862178767 2862178590 Bacteria 8583590
201 2862580914 2862574272 Bacteria 10567477
202 Ga0070660_100011648
203 Ga0070683_100002472
204 Ga0070683_100021670
205 Ga0070660_100013751
206 Ga0070660_100040391
207 Ga0070661_100007966
208 Ga0070675_100021924
209 Ga0070714_100012463
210 Ga0070713_100008835
211 Ga0070681_10001591
212 Ga0070681_10006990
213 Ga0070681_10012573
214 Ga0070681_10015213
215 Ga0070681_10016355
216 Ga0070681_10028165
217 Ga0070706_100003808
218 Ga0070707_100008398
219 Ga0070698_100016407
220 Ga0070699_100007283
221 Ga0070679_100019432
222 Ga0070679_100044128
223 Ga0070684_100001383
224 Ga0068857_100010502
225 Ga0068857_100036642
226 Ga0068856_100091882
227 Ga0070716_100016901
228 Ga0070712_100007701
229 Ga0105240_10003352
230 Ga0105240_10059366
231 Ga0105240_10067746
232 Ga0105237_10013082
233 Ga0105237_10013814
234 Ga0105239_10045777
235 Ga0157370_10004963
236 Ga0157370_10007863
237 Ga0157369_10002638
238 Ga0157369_10007653
239 Ga0157369_10040490
240 Ga0157369_10068721
241 Ga0157369_10125648
242 Ga0157372_10047791
243 Ga0157372_10070275
244 Ga0206353_10110582
245 Ga0206353_10920896
246 Ga0207699_10000139
247 Ga0207707_10001636
248 Ga0207707_10011399
249 Ga0207695_10016161
250 Ga0207693_10014528
251 Ga0207657_10000271
252 Ga0207657_10001734
253 Ga0207657_10038230
254 Ga0207657_10050548
255 Ga0207649_10019735
256 Ga0207652_10022244
257 Ga0207646_10004389
258 Ga0207700_10000530
259 Ga0207664_10013942
260 Ga0207665_10030121
261 Ga0207661_10014784
262 Ga0207667_10037500
263 Ga0207658_10009646
264 Ga0207674_10022473
265 Ga0207674_10024377
266 Ga0265319_1004812
267 Ga0265336_10000680
268 Ga0265338_10005891
269 Ga0265338_10006615
270 Ga0265338_10011671
271 Ga0265325_10007179
272 Ga0265327_10002344
273 Ga0265316_10004722
274 Ga0265313_10001477
275 Ga0265314_10007233
276 Ga0316576_10001010
277 Ga0316576_10023817
278 Ga0316576_10025003
279 Ga0373943_0014613
280 Ga0316574_0002700
281 Ga0316574_0025873
282 Ga0373947_0001683
283 Ga0373947_0044376
284 Ga0316584_0001391
285 Ga0316584_0009602
286 Ga0373925_0009985
287 Ga0395900_0058957
288 Ga0395898_0004839
289 Ga0395898_0166808
290 Ga0395901_0002250
291 Ga0395901_0006460
292 Ga0395901_0096717
293 Ga0466966_0035210
294 Ga0466961_0004938
295 Ga0466961_0021773
296 Ga0466963_0001586
297 Ga0466963_0003789
298 Ga0466963_0006120
299 Ga0466963_0025901
300 Ga0466964_0008100
301 Ga0466971_0000690
302 Ga0466957_0005266
303 Ga0466959_0003221
304 Ga0466959_0023689
305 Ga0466958_0002392
306 Ga0466958_0053935
307 Ga0466967_0002172
308 Ga0466967_0002211
309 Ga0466967_0006778
310 Ga0466967_0027074
311 Ga0466967_0121081
312 Ga0495629_0000322
313 Ga0495629_0049681
314 Ga0495641_0000172
315 Ga0495651_0011256
316 Ga0495651_0013773
317 Ga0495580_0061790
318 Ga0495582_0000293
319 Ga0495639_0000669
320 Ga0495662_0007791
321 Ga0495662_0008222
322 Ga0495662_0019729
323 Ga0495585_0040510
324 Ga0495630_0004985
325 Ga0495643_0004172
326 Ga0495642_0015396
327 Ga0495652_0038786
328 Ga0495609_0031555
329 Ga0495667_0019094
330 Ga0495634_0014554
331 Ga0495625_0038844
332 Ga0495635_0009181
333 Ga0495657_0002270
334 Ga0495657_0038730
335 Ga0495599_0033428
336 Ga0495658_0000583
337 Ga0495669_0001972
338 Ga0495613_0002165
339 Ga0495613_0010624
340 Ga0495613_0084816
341 Ga0495600_0035632
342 Ga0495600_0067488
343 Ga0495581_0001529
344 Ga0495604_0007706
345 Ga0495604_0033072
346 Ga0495604_0101652
347 Ga0495636_0003293
348 Ga0495674_0063474
349 Ga0495672_0042849
350 Ga0495676_0025869
351 Ga0495680_0005474
352 Ga0495680_0007676
353 Ga0495680_0010210
354 Ga0495687_002594
355 Ga0495675_0024927
356 Ga0495685_005462
357 Ga0495685_012954
358 Ga0495684_0002259
359 Ga0495684_0002946
360 Ga0495593_0005899
361 Ga0495614_0006376
362 Ga0496100_0001948
363 Ga0496101_0005006
364 Ga0496101_0009733
365 Ga0496102_0001373
366 Ga0496103_0037294
367 Ga0496104_0095929
368 Ga0496105_0000466
369 Ga0496106_0030085
370 Ga0496106_0037771
371 Ga0496107_0002960
372 Ga0496107_0006692
373 Ga0496107_0010989
374 Ga0496108_0003292
375 Ga0496109_0000847
376 Ga0496110_0006627
377 Ga0496110_0072783
378 Ga0496112_0021043
379 Ga0496112_0043695
380 Ga0496112_0051341
381 Ga0496114_0000954
382 Ga0496114_0061363
383 Ga0496115_0001782
384 Ga0496115_0034878
385 Ga0495678_021012
386 Ga0501070_0008954
387 Ga0501074_0028100
388 Ga0501080_0034173
389 Ga0495601_0016435
390 Ga0495595_0001746
391 Ga0495595_0004725
392 Ga0495595_0008825
393 Ga0495619_0001119
394 Ga0495619_0003090
395 Ga0495619_0014496
396 Ga0466962_0006402
397 Ga0466962_0006748
398 2585312699
399 2616703234
400 2811848360
401 2862178767
402 2862580914

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

37

462

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.7987 14 450
6s3k-assembly1.cif.gz_B kima from bacillus subtilis in inward-facing, occluded state 0.7968 18 599
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.7948 5 449
6s3k-assembly1.cif.gz_B kima from bacillus subtilis in inward-facing, occluded state 0.7904 18 599
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.7899 5 449
ID Description Score Start End Superfamily
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9527 21 455 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.935 28 464 1.20.1740.10
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9334 21 455 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8931 28 464 1.20.1740.10
af_Q86I87_92_535_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8411 11 451 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A558AQB5-F1-model_v4 APC family permease 0.9557 3 273 GO:0016020
GO:0022857
AF-A0A355BK89-F1-model_v4 Amino acid permease 0.9502 1 337 GO:0016020
GO:0022857
AF-A0A2M7SQR9-F1-model_v4 Permease 0.9463 45 430 GO:0016020
GO:0022857
AF-W7SW57-F1-model_v4 Membrane protein 0.9399 7 433 GO:0016020
GO:0022857
AF-A0A533SFQ8-F1-model_v4 Amino acid permease 0.9395 1 394 GO:0016020
GO:0022857

Map