F306155

General Info

Members Datasets Scaffolds Average Seq Length
199 161 166 321

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0000769|Ga0466970_0000769_9137_10225
Length 362
Sequence LQVAFQFPDNRRQPQRQAVPGHRLFFTTFVVMSKYDILIIGGGPIGLACGIAAKQAGLSYVIVEKGALVNSLFNYPLFMTFFSTSERLEIGGAPFMSLAPKPGRQEAIEYYRRVKQMHNLNVHLFEEVKEVKKQYVAVEAPYTVETTKGVYEADKVIISTGFYDIPIYLDVPGEDLPKVSHYYKEPHFYAFQKVLVIGASNSAVDAALETWRKGAEVTMVVRQPAIGERVKYWVKPDIENRIKEGSIKAYFNSSVVAIREGEVDIDTPGGRLTLANDFVLAMTGYRPDFAMLQRFGIDLSDDERKCPTYNPDTMETNQPGMYLAGVVCGGMETHKWFIENSREHADKIIAHILSVKEKIAGG

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
5 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
6 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
7 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
8 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
12 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
13 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
14 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
15 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
16 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
17 2818991444 Filimonas endophytica 3197 Isolate Unclassified
18 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
19 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
20 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
21 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
22 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
23 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
24 2914759650 Rhizosphaericola mali Isolate Rhizosphere
25 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
26 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
27 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
28 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
29 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
30 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
31 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
32 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
33 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
34 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
35 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
36 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
37 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
38 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
39 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
40 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
41 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
42 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
56 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
57 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
58 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
107 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
108 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
134 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
135 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
136 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
137 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
138 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
139 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
140 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
146 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
147 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
148 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
149 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
150 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
155 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
156 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
158 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
159 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
160 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
161 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.41
Metatranscriptomes 0.5
Isolates 17.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.58
Nodule 2.01
Rhizoplane 0.5
Rhizosphere 57.29
Stem 0
Stem Tuber 0
Unclassified 24.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_7960791 2162886012 Bacteria 1221
2 rootH1_10011238 3300003316 Bacteria 18907
3 rootH1_10073809 3300003316 Bacteria 8113
4 rootH1_10123387 3300003316 Unclassified 2883
5 rootH2_10140863 3300003320 Bacteria 2188
6 rootH2_10204199 3300003320 Bacteria 2696
7 rootL2_10021540 3300003322 Unclassified 4663
8 rootL2_10035533 3300003322 Bacteria 11229
9 rootL2_10181979 3300003322 Unclassified 2169
10 rootH1_10000619 3300003316 Bacteria 3651
11 rootH1_10000619 3300003323 Bacteria 100005
12 rootH1_10106970 3300003323 Unclassified 3768
13 rootH1_10279511 3300003323 Unclassified 3903
14 rootH1_10288785 3300003323 Bacteria 1898
15 JGI25160J50197_1004391 3300003354 Bacteria 6107
16 Ga0006562J51391_1020427 3300003578 Bacteria 1940
17 Ga0055542_1003792 3300003762 Bacteria 3929
18 Ga0055531_10000120 3300003794 Bacteria 87551
19 Ga0065714_10005059 3300005288 Bacteria 4199
20 Ga0065714_10071955 3300005288 Bacteria 3462
21 Ga0065704_10104108 3300005289 Bacteria 2152
22 Ga0065715_10015231 3300005293 Bacteria 1740
23 Ga0065715_10101263 3300005293 Bacteria 3223
24 Ga0070681_10115381 3300005458 Bacteria 2623
25 Ga0070679_100176739 3300005530 Bacteria 2107
26 Ga0068856_100020279 3300005614 Bacteria 6456
27 Ga0068859_100209521 3300005617 Bacteria 2035
28 Ga0068863_100016088 3300005841 Bacteria 7173
29 Ga0068862_100243126 3300005844 Bacteria 1637
30 Ga0070716_100020830 3300006173 Unclassified 3447
31 Ga0068871_100123292 3300006358 Unclassified 2191
32 Ga0075428_100017440 3300006844 Bacteria 7936
33 Ga0075430_100174819 3300006846 Bacteria 1787
34 Ga0075431_100493608 3300006847 Bacteria 1216
35 Ga0097620_100209521 3300006931 Bacteria 2035
36 Ga0099824_1019391 3300006942 Bacteria 5310
37 Ga0079104_1000321 3300006946 Bacteria 60074
38 Ga0099826_10007074 3300006948 Bacteria 8237
39 Ga0105244_10000108 3300009036 Bacteria 86321
40 Ga0111539_10004881 3300009094 Bacteria 17464
41 Ga0105237_10018906 3300009545 Bacteria 7123
42 Ga0105249_10018450 3300009553 Bacteria 6207
43 Ga0105239_10005057 3300010375 Bacteria 15581
44 Ga0157373_10000002 3300013100 Bacteria 750094
45 Ga0157371_10013925 3300013102 Bacteria 6091
46 Ga0157370_10000360 3300013104 Bacteria 57621
47 Ga0157370_10000505 3300013104 Bacteria 48631
48 Ga0157370_10000771 3300013104 Bacteria 40125
49 Ga0157370_10018983 3300013104 Bacteria 6913
50 Ga0157369_10002103 3300013105 Bacteria 24007
51 Ga0163162_10007497 3300013306 Bacteria 10620
52 Ga0163162_10013661 3300013306 Bacteria 7934
53 Ga0163163_10001550 3300014325 Bacteria 19374
54 Ga0157380_10024757 3300014326 Bacteria 4547
55 Ga0157376_10134423 3300014969 Bacteria 2211
56 Ga0182006_1002549 3300015261 Bacteria 9884
57 Ga0163161_10000063 3300017792 Bacteria 109669
58 Ga0163161_10068137 3300017792 Bacteria 2600
59 Ga0163161_10128439 3300017792 Bacteria 1910
60 Ga0209258_100068 3300025242 Bacteria 286288
61 Ga0209148_1000343 3300025254 Bacteria 61260
62 Ga0209050_1001313 3300025298 Bacteria 27883
63 Ga0207426_1000002 3300025302 Bacteria 1249660
64 Ga0209257_1000007 3300025304 Bacteria 1564415
65 Ga0207655_1000128 3300025728 Bacteria 149987
66 Ga0207671_10130973 3300025914 Bacteria 1925
67 Ga0207652_10197961 3300025921 Bacteria 1808
68 Ga0207665_10287772 3300025939 Bacteria 1225
69 Ga0207712_10231484 3300025961 Bacteria 1483
70 Ga0207702_10019554 3300026078 Bacteria 5605
71 Ga0207641_10040090 3300026088 Unclassified 3919
72 Ga0207676_10125390 3300026095 Unclassified 2174
73 Ga0209281_1000244 3300027111 Bacteria 109979
74 Ga0307515_10000094 3300028794 Bacteria 210723
75 Ga0307515_10043593 3300028794 Bacteria 6967
76 Ga0307515_10143577 3300028794 Bacteria 2544
77 Ga0265327_10000597 3300031251 Bacteria 60192
78 Ga0307509_10016117 3300031507 Bacteria 8665
79 Ga0307509_10166560 3300031507 Bacteria 2091
80 Ga0307408_100137633 3300031548 Bacteria 1912
81 Ga0307413_10000439 3300031824 Bacteria 13517
82 Ga0307410_10000191 3300031852 Bacteria 22695
83 Ga0307406_10000143 3300031901 Bacteria 42246
84 Ga0307407_10001412 3300031903 Bacteria 8673
85 Ga0307412_10047735 3300031911 Bacteria 2813
86 Ga0307412_10079120 3300031911 Bacteria 2267
87 Ga0307416_100000418 3300032002 Bacteria 21636
88 Ga0307414_10000086 3300032004 Bacteria 85265
89 Ga0307414_10030859 3300032004 Bacteria 3507
90 Ga0307411_10000001 3300032005 Bacteria 931810
91 Ga0307507_10000010 3300033179 Bacteria 265208
92 Ga0307510_10092245 3300033180 Bacteria 2866
93 Ga0373927_0195483 3300035695 Bacteria 1327
94 Ga0395899_0024578 3300037312 Bacteria 4555
95 Ga0395900_0038212 3300037418 Bacteria 4949
96 Ga0395900_0215460 3300037418 Unclassified 1938
97 Ga0395905_0014877 3300037471 Bacteria 7423
98 Ga0395901_0002612 3300038443 Bacteria 18236
99 Ga0439447_008453 3300041407 Bacteria 3184
100 Ga0439466_0003020 3300041411 Bacteria 6560
101 Ga0451835_0210139 3300041492 Bacteria 1185
102 Ga0451577_0003184 3300042876 Bacteria 18444
103 Ga0466972_0000003 3300044658 Bacteria 391452
104 Ga0453683_0085654 3300044673 Bacteria 1974
105 Ga0453684_0001619 3300044712 Bacteria 61621
106 Ga0453684_0003784 3300044712 Bacteria 33412
107 Ga0466970_0000769 3300044765 Bacteria 15525
108 Ga0451576_0004040 3300045051 Bacteria 19469
109 Ga0495627_001806 3300046453 Bacteria 11405
110 Ga0495638_0000004 3300046460 Bacteria 700795
111 Ga0495585_0001289 3300046492 Bacteria 19978
112 Ga0495607_0006869 3300046501 Bacteria 7938
113 Ga0495606_0018489 3300046507 Bacteria 5222
114 Ga0495606_0022445 3300046507 Bacteria 4598
115 Ga0495606_0039193 3300046507 Bacteria 3197
116 Ga0495616_0010039 3300046513 Bacteria 5496
117 Ga0495643_0000067 3300046522 Bacteria 175403
118 Ga0495648_0001649 3300046524 Bacteria 21669
119 Ga0495609_0042791 3300046538 Bacteria 2034
120 Ga0495668_0000003 3300046616 Bacteria 695023
121 Ga0495625_0001508 3300046660 Bacteria 27981
122 Ga0495625_0003717 3300046660 Bacteria 14877
123 Ga0495625_0022060 3300046660 Bacteria 4888
124 Ga0495614_0003684 3300048089 Bacteria 6877
125 Ga0496115_0014728 3300048918 Bacteria 5925
126 Ga0496116_0000032 3300048919 Bacteria 419997
127 Ga0496117_0258388 3300048920 Bacteria 946
128 Ga0496121_0027156 3300048924 Bacteria 5365
129 Ga0496121_0062395 3300048924 Bacteria 3053
130 Ga0496125_0000024 3300048928 Bacteria 442149
131 Ga0496125_0000059 3300048928 Bacteria 264149
132 Ga0496126_0035261 3300048929 Bacteria 4691
133 Ga0496126_0040837 3300048929 Bacteria 4298
134 Ga0501290_023047 3300049513 Bacteria 861
135 Ga0501202_003291 3300049652 Unclassified 2760
136 Ga0501207_023058 3300049654 Bacteria 1008
137 Ga0501238_000262 3300049671 Bacteria 6991
138 Ga0501249_000037 3300049679 Bacteria 63492
139 Ga0501249_001046 3300049679 Bacteria 5901
140 Ga0501257_006035 3300049686 Bacteria 2683
141 Ga0501266_000019 3300049763 Bacteria 114355
142 Ga0501280_002265 3300049776 Bacteria 3261
143 nmdc:mga08y16_84448_c1 3300050511 Bacteria 3310
144 Ga0500646_0003373 3300053090 Bacteria 4101
145 Ga0500646_0003709 3300053090 Bacteria 3912
146 Ga0500651_0135980 3300053093 Bacteria 1484
147 Ga0500641_0000019 3300053096 Bacteria 123198
148 Ga0500641_0000080 3300053096 Bacteria 38955
149 Ga0500641_0000511 3300053096 Bacteria 13960
150 Ga0500650_0067254 3300053098 Bacteria 1674
151 Ga0500562_000029 3300053108 Bacteria 94705
152 Ga0500607_028363 3300053121 Bacteria 3100
153 Ga0500614_010725 3300053123 Bacteria 1972
154 Ga0500618_000003 3300053125 Bacteria 338706
155 Ga0500658_0000003 3300053134 Bacteria 512506
156 Ga0500559_0033553 3300053136 Bacteria 2210
157 Ga0500577_0000589 3300053142 Bacteria 9367
158 Ga0500616_0000015 3300053153 Bacteria 633259
159 Ga0500616_0029893 3300053153 Bacteria 2995
160 Ga0500616_0078164 3300053153 Bacteria 1669
161 Ga0500622_0000075 3300053156 Bacteria 109513
162 Ga0500622_0000086 3300053156 Bacteria 99366
163 Ga0500622_0001004 3300053156 Bacteria 23799
164 Ga0500624_000269 3300053157 Bacteria 18098
165 Ga0500584_012588 3300053726 Bacteria 3850
166 Ga0500645_018093 3300053730 Bacteria 2203

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041492 Ga0451835_0210139 Ga0451835_0210139_20_862 273
2 3300049513 Ga0501290_023047 Ga0501290_023047_17_838 273
3 3300049654 Ga0501207_023058 Ga0501207_023058_136_957 273
4 3300048920 Ga0496117_0258388 Ga0496117_0258388_10_834 274
5 3300046616 Ga0495668_0000003 Ga0495668_0000003_615116_616075 297
6 3300053157 Ga0500624_000269 Ga0500624_000269_14531_15487 300
7 3300037312 Ga0395899_0024578 Ga0395899_0024578_3340_4302 301
8 3300037418 Ga0395900_0038212 Ga0395900_0038212_3153_4115 301
9 3300037471 Ga0395905_0014877 Ga0395905_0014877_5726_6688 301
10 3300038443 Ga0395901_0002612 Ga0395901_0002612_4621_5583 301
11 3300033179 Ga0307507_10000010 Ga0307507_1000001039 304
12 3300046492 Ga0495585_0001289 Ga0495585_0001289_1233_2207 304
13 3300046524 Ga0495648_0001649 Ga0495648_0001649_557_1531 304
14 3300046538 Ga0495609_0042791 Ga0495609_0042791_793_1767 304
15 3300046660 Ga0495625_0001508 Ga0495625_0001508_17134_18108 304
16 3300046660 Ga0495625_0003717 Ga0495625_0003717_12356_13318 304
17 3300048089 Ga0495614_0003684 Ga0495614_0003684_1625_2584 304
18 3300053123 Ga0500614_010725 Ga0500614_010725_64_1038 304
19 3300053125 Ga0500618_000003 Ga0500618_000003_103214_104170 304
20 3300053156 Ga0500622_0000075 Ga0500622_0000075_74062_75048 305
21 3300003762 Ga0055542_1003792 Ga0055542_10037922 310
22 3300025242 Ga0209258_100068 Ga0209258_100068111 310
23 3300025254 Ga0209148_1000343 Ga0209148_100034347 310
24 3300053090 Ga0500646_0003709 Ga0500646_0003709_194_1186 310
25 3300053093 Ga0500651_0135980 Ga0500651_0135980_262_1254 310
26 3300053142 Ga0500577_0000589 Ga0500577_0000589_4576_5568 310
27 3300053153 Ga0500616_0078164 Ga0500616_0078164_648_1640 310
28 3300053121 Ga0500607_028363 Ga0500607_028363_629_1621 311
29 3300032004 Ga0307414_10030859 Ga0307414_100308592 313
30 3300031911 Ga0307412_10047735 Ga0307412_100477352 314
31 iso_pu_bacteria 2738541273 2738701701 315
32 iso_pu_bacteria 2738543014 2739255999 315
33 3300003316 rootH1_10073809 rootH1_100738096 316
34 iso_pu_bacteria 2739367857 2740004168 316
35 iso_pu_bacteria 2739367858 2740008985 316
36 iso_pu_bacteria 2904419702 2904422897 316
37 iso_pu_bacteria 2914759650 2914760141 316
38 3300003316 rootH1_10011238 rootH1_100112384 317
39 3300003322 rootL2_10021540 rootL2_100215404 317
40 3300003322 rootL2_10181979 rootL2_101819792 317
41 3300003323 rootH1_10000619 rootH1_1000061919 317
42 3300003323 rootH1_10106970 rootH1_101069702 317
43 3300003323 rootH1_10279511 rootH1_102795113 317
44 3300003794 Ga0055531_10000120 Ga0055531_1000012070 317
45 3300005614 Ga0068856_100020279 Ga0068856_1000202794 317
46 3300005617 Ga0068859_100209521 Ga0068859_1002095212 317
47 3300005841 Ga0068863_100016088 Ga0068863_1000160883 317
48 3300005844 Ga0068862_100243126 Ga0068862_1002431262 317
49 3300006358 Ga0068871_100123292 Ga0068871_1001232922 317
50 3300006931 Ga0097620_100209521 Ga0097620_1002095212 317
51 3300009553 Ga0105249_10018450 Ga0105249_100184506 317
52 3300025304 Ga0209257_1000007 Ga0209257_10000071009 317
53 3300025961 Ga0207712_10231484 Ga0207712_102314842 317
54 3300026078 Ga0207702_10019554 Ga0207702_100195544 317
55 3300026088 Ga0207641_10040090 Ga0207641_100400904 317
56 3300028794 Ga0307515_10043593 Ga0307515_100435932 317
57 3300028794 Ga0307515_10143577 Ga0307515_101435772 317
58 3300031507 Ga0307509_10016117 Ga0307509_100161179 317
59 3300031507 Ga0307509_10166560 Ga0307509_101665601 317
60 3300046507 Ga0495606_0018489 Ga0495606_0018489_4216_5187 317
61 3300053098 Ga0500650_0067254 Ga0500650_0067254_250_1209 317
62 iso_pu_bacteria 2519899754 2520882361 317
63 iso_pu_bacteria 2643221667 2644372283 317
64 iso_pu_bacteria 2738541279 2738732595 317
65 iso_pu_bacteria 2738541285 2738765160 317
66 iso_pu_bacteria 2738543007 2739214175 317
67 iso_pu_bacteria 2816332280 2817416360 317
68 iso_pu_bacteria 2818991444 2819588651 317
69 iso_pu_bacteria 2857613821 2857615048 317
70 iso_pu_bacteria 2857618242 2857618751 317
71 iso_pu_bacteria 2881247448 2881250353 317
72 iso_pu_bacteria 2903895155 2903896800 317
73 iso_pu_bacteria 2929150217 2929153649 317
74 iso_pu_bacteria 2929154850 2929157668 317
75 iso_pu_bacteria 2958458903 2958461204 317
76 iso_pu_bacteria 8055419101 8055422029 317
77 iso_pu_bacteria 8055592153 8055593311 317
78 3300003320 rootH2_10204199 rootH2_102041991 318
79 3300006173 Ga0070716_100020830 Ga0070716_1000208304 318
80 3300025939 Ga0207665_10287772 Ga0207665_102877722 318
81 3300028794 Ga0307515_10000094 Ga0307515_10000094139 318
82 3300031911 Ga0307412_10079120 Ga0307412_100791203 318
83 3300035695 Ga0373927_0195483 Ga0373927_0195483_129_1091 318
84 3300042876 Ga0451577_0003184 Ga0451577_0003184_6888_7865 318
85 3300044673 Ga0453683_0085654 Ga0453683_0085654_551_1525 318
86 3300044712 Ga0453684_0003784 Ga0453684_0003784_19579_20556 318
87 3300045051 Ga0451576_0004040 Ga0451576_0004040_11431_12408 318
88 iso_pu_bacteria 2513020052 2513235979 318
89 iso_pu_bacteria 2643221600 2644012974 318
90 iso_pu_bacteria 2643221716 2644642709 318
91 iso_pu_bacteria 2643221725 2644684755 318
92 iso_pu_bacteria 2802428842 2802653688 318
93 iso_pu_bacteria 2904555929 2904557164 318
94 iso_pu_bacteria 2919191525 2919195216 318
95 iso_pu_bacteria 2919683626 2919685983 318
96 iso_pu_bacteria 2977268062 2977270314 318
97 iso_pu_bacteria 8054307821 8054309981 318
98 iso_pu_bacteria 8056440228 8056443867 318
99 3300003323 rootH1_10288785 rootH1_102887851 319
100 3300005458 Ga0070681_10115381 Ga0070681_101153813 319
101 3300005530 Ga0070679_100176739 Ga0070679_1001767393 319
102 3300009545 Ga0105237_10018906 Ga0105237_100189062 319
103 3300010375 Ga0105239_10005057 Ga0105239_100050572 319
104 3300025914 Ga0207671_10130973 Ga0207671_101309733 319
105 3300025921 Ga0207652_10197961 Ga0207652_101979612 319
106 3300031251 Ga0265327_10000597 Ga0265327_1000059739 319
107 3300044658 Ga0466972_0000003 Ga0466972_0000003_32936_33928 319
108 3300048918 Ga0496115_0014728 Ga0496115_0014728_4844_5812 319
109 3300048928 Ga0496125_0000024 Ga0496125_0000024_118370_119338 319
110 3300048929 Ga0496126_0035261 Ga0496126_0035261_544_1512 319
111 3300053108 Ga0500562_000029 Ga0500562_000029_51099_52067 319
112 3300053153 Ga0500616_0029893 Ga0500616_0029893_165_1136 319
113 3300053156 Ga0500622_0001004 Ga0500622_0001004_12421_13389 319
114 3300053730 Ga0500645_018093 Ga0500645_018093_430_1398 319
115 iso_pu_bacteria 2958512119 2958515637 319
116 3300003320 rootH2_10140863 rootH2_101408632 320
117 3300003322 rootL2_10035533 rootL2_100355338 320
118 3300005289 Ga0065704_10104108 Ga0065704_101041082 320
119 3300006844 Ga0075428_100017440 Ga0075428_10001744010 320
120 3300006846 Ga0075430_100174819 Ga0075430_1001748191 320
121 3300006847 Ga0075431_100493608 Ga0075431_1004936082 320
122 3300006942 Ga0099824_1019391 Ga0099824_10193912 320
123 3300006946 Ga0079104_1000321 Ga0079104_100032133 320
124 3300006948 Ga0099826_10007074 Ga0099826_100070744 320
125 3300009094 Ga0111539_10004881 Ga0111539_1000488122 320
126 3300013104 Ga0157370_10000771 Ga0157370_100007713 320
127 3300013306 Ga0163162_10007497 Ga0163162_100074973 320
128 3300013306 Ga0163162_10013661 Ga0163162_100136614 320
129 3300014325 Ga0163163_10001550 Ga0163163_1000155020 320
130 3300014326 Ga0157380_10024757 Ga0157380_100247572 320
131 3300014969 Ga0157376_10134423 Ga0157376_101344232 320
132 3300017792 Ga0163161_10068137 Ga0163161_100681373 320
133 3300025298 Ga0209050_1001313 Ga0209050_100131329 320
134 3300026095 Ga0207676_10125390 Ga0207676_101253902 320
135 3300027111 Ga0209281_1000244 Ga0209281_100024434 320
136 3300031548 Ga0307408_100137633 Ga0307408_1001376332 320
137 3300031852 Ga0307410_10000191 Ga0307410_1000019114 320
138 3300031901 Ga0307406_10000143 Ga0307406_1000014312 320
139 3300031903 Ga0307407_10001412 Ga0307407_100014125 320
140 3300032002 Ga0307416_100000418 Ga0307416_10000041816 320
141 3300032004 Ga0307414_10000086 Ga0307414_1000008623 320
142 3300037418 Ga0395900_0215460 Ga0395900_0215460_848_1897 320
143 3300041411 Ga0439466_0003020 Ga0439466_0003020_2304_3269 320
144 3300044712 Ga0453684_0001619 Ga0453684_0001619_18813_19796 320
145 3300046460 Ga0495638_0000004 Ga0495638_0000004_470995_471978 320
146 3300049652 Ga0501202_003291 Ga0501202_003291_735_1703 320
147 3300049671 Ga0501238_000262 Ga0501238_000262_704_1669 320
148 3300049686 Ga0501257_006035 Ga0501257_006035_698_1666 320
149 3300049776 Ga0501280_002265 Ga0501280_002265_990_1952 320
150 3300050511 nmdc:mga08y16_84448_c1 nmdc:mga08y16_84448_c1_1576_2562 320
151 3300053096 Ga0500641_0000080 Ga0500641_0000080_2171_3151 320
152 3300053136 Ga0500559_0033553 Ga0500559_0033553_1149_2111 320
153 3300053153 Ga0500616_0000015 Ga0500616_0000015_353759_354742 320
154 3300053156 Ga0500622_0000086 Ga0500622_0000086_34621_35607 320
155 2162886012 MBSR1b_contig_7960791 MBSR1b_0763.00001520 321
156 3300003316 rootH1_10123387 rootH1_101233872 321
157 3300003354 JGI25160J50197_1004391 JGI25160J50197_10043916 321
158 3300003578 Ga0006562J51391_1020427 Ga0006562J51391_10204272 321
159 3300005288 Ga0065714_10005059 Ga0065714_100050595 321
160 3300005288 Ga0065714_10071955 Ga0065714_100719554 321
161 3300005293 Ga0065715_10015231 Ga0065715_100152312 321
162 3300005293 Ga0065715_10101263 Ga0065715_101012632 321
163 3300009036 Ga0105244_10000108 Ga0105244_1000010860 321
164 3300013100 Ga0157373_10000002 Ga0157373_10000002607 321
165 3300013102 Ga0157371_10013925 Ga0157371_100139256 321
166 3300013104 Ga0157370_10000360 Ga0157370_100003604 321
167 3300013104 Ga0157370_10000505 Ga0157370_1000050548 321
168 3300013104 Ga0157370_10018983 Ga0157370_100189834 321
169 3300013105 Ga0157369_10002103 Ga0157369_1000210313 321
170 3300015261 Ga0182006_1002549 Ga0182006_10025498 321
171 3300017792 Ga0163161_10000063 Ga0163161_1000006339 321
172 3300017792 Ga0163161_10128439 Ga0163161_101284392 321
173 3300025302 Ga0207426_1000002 Ga0207426_1000002313 321
174 3300025728 Ga0207655_1000128 Ga0207655_100012888 321
175 3300031824 Ga0307413_10000439 Ga0307413_100004393 321
176 3300032005 Ga0307411_10000001 Ga0307411_10000001353 321
177 3300033180 Ga0307510_10092245 Ga0307510_100922451 321
178 3300041407 Ga0439447_008453 Ga0439447_008453_1580_2545 321
179 3300044765 Ga0466970_0000769 Ga0466970_0000769_9137_10225 321
180 3300046453 Ga0495627_001806 Ga0495627_001806_5157_6146 321
181 3300046501 Ga0495607_0006869 Ga0495607_0006869_5072_6049 321
182 3300046507 Ga0495606_0022445 Ga0495606_0022445_2454_3437 321
183 3300046507 Ga0495606_0039193 Ga0495606_0039193_722_1702 321
184 3300046513 Ga0495616_0010039 Ga0495616_0010039_1765_2745 321
185 3300046522 Ga0495643_0000067 Ga0495643_0000067_62220_63200 321
186 3300046660 Ga0495625_0022060 Ga0495625_0022060_1109_2086 321
187 3300048919 Ga0496116_0000032 Ga0496116_0000032_56262_57230 321
188 3300048924 Ga0496121_0027156 Ga0496121_0027156_1569_2540 321
189 3300048924 Ga0496121_0062395 Ga0496121_0062395_589_1557 321
190 3300048928 Ga0496125_0000059 Ga0496125_0000059_53653_54621 321
191 3300048929 Ga0496126_0040837 Ga0496126_0040837_165_1133 321
192 3300049679 Ga0501249_000037 Ga0501249_000037_9768_10742 321
193 3300049679 Ga0501249_001046 Ga0501249_001046_1191_2156 321
194 3300049763 Ga0501266_000019 Ga0501266_000019_34880_35845 321
195 3300053090 Ga0500646_0003373 Ga0500646_0003373_398_1363 321
196 3300053096 Ga0500641_0000019 Ga0500641_0000019_69757_70722 321
197 3300053096 Ga0500641_0000511 Ga0500641_0000511_7098_8066 321
198 3300053134 Ga0500658_0000003 Ga0500658_0000003_267842_268807 321
199 3300053726 Ga0500584_012588 Ga0500584_012588_2681_3646 321

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

36

75

0.93

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

193

267

0.92

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

38

325

0.92

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

35

342

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9798 4 35
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.9689 1 320
7a7b-assembly1.cif.gz_D bacillithiol disulfide reductase bdr (ypda) from staphylococcus aureus 0.9643 1 320
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.963 1 320
7a7b-assembly1.cif.gz_D bacillithiol disulfide reductase bdr (ypda) from staphylococcus aureus 0.9585 1 320
ID Description Score Start End Superfamily
af_Q2FYF3_156_325_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9618 158 320 3.50.50.60
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9617 1 147 3.50.50.60
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9554 1 147 3.50.50.60
af_Q2FZ31_2_179_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9424 158 190 3.50.50.60
af_Q46808_105_253_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9313 6 34 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7C5R3F2-F1-model_v4 YpdA family bacillithiol disulfide reductase 0.9869 95 320 GO:0016491
AF-A0A376DR97-F1-model_v4 Uncharacterized oxidoreductase CzcO (EC 1.-.-.-) 0.9859 1 194 GO:0004497
GO:0050660
AF-A0A3M1KW72-F1-model_v4 YpdA family putative bacillithiol disulfide reductase 0.9857 1 254 GO:0004497
GO:0050660
AF-A0A2S1QD44-F1-model_v4 YpdA family putative bacillithiol disulfide reductase 0.9847 2 321 GO:0016491
AF-A0A0D5BSF5-F1-model_v4 deleted 0.9831 1 320

Feature Viewer

pLDDT pTM Quality
91.08 0.87 High
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Predicted Structure (AlphaFold2)

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