F305613

General Info

Members Datasets Scaffolds Average Seq Length
199 142 198 442

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10122852|Ga0070717_101228522
Length 472
Sequence MGELRAAWIGQAHMEMTGDPMTTTMNKEASASLDLLQDLIARARRAGADAADALLFEGTSLSHGRRLGKTEKLERSEGHDLGLRVFIGRQQAVVSSSDRSPQALDELVERAVAMARTVPEDPFCGIADPAEIARDWPSLDMLDPDEPGAAVLIERARAAEEAALAVEGVTNSEGAEAGWGRSSIVLAASNGFAGAYSGSSQGVSASVIAGSGTGMERDYDFASAIHAGDLRDPVEIGRSAGERAVKRLGAKKMPTCRCPVVFDPRVARSFISHLLGAISGPSIARGTSFLKDRLGDRIFPEAVTIIDDPHRHRGLRSKPFDGEGIANRRRAIIDKGVLTTWLLDLRSSRQLGMKTTGHAARGTASPPSPAATNVWIEPGTLSPKELMADIESGFYVTEMMGMGVNGVTGDYSRGAAGFWIDKGEIAFPVSEMTVAGNLKDIFARLVAADNLEFKAGADSPTLRIDDLTVAGA

Samples

Sample ID Description Type Environment
1 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
130 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
133 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
134 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
135 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
136 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
137 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
138 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
139 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
140 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.06
Nodule 0
Rhizoplane 1.01
Rhizosphere 83.92
Stem 0
Stem Tuber 0
Unclassified 4.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10010963 3300002459 Bacteria 1868
2 JGI25153J46596_10000059 3300003215 Bacteria 131871
3 JGI25153J46596_10001205 3300003215 Bacteria 15650
4 Ga0070658_10002265 3300005327 Bacteria 16160
5 Ga0070690_100076445 3300005330 Bacteria 2184
6 Ga0070677_10001790 3300005333 Bacteria 6799
7 Ga0070666_10000275 3300005335 Bacteria 34059
8 Ga0070680_100010347 3300005336 Bacteria 7191
9 Ga0070680_100049395 3300005336 Bacteria 3429
10 Ga0068868_100012626 3300005338 Bacteria 6178
11 Ga0070709_10005164 3300005434 Bacteria 7061
12 Ga0070709_10046296 3300005434 Bacteria 2704
13 Ga0070714_100001011 3300005435 Bacteria 20078
14 Ga0070714_100085676 3300005435 Bacteria 2752
15 Ga0070710_10101357 3300005437 Bacteria 1715
16 Ga0070681_10110970 3300005458 Bacteria 2682
17 Ga0070707_100056630 3300005468 Bacteria 3760
18 Ga0070698_100049042 3300005471 Bacteria 4313
19 Ga0070679_100004355 3300005530 Bacteria 13077
20 Ga0070679_100047576 3300005530 Bacteria 4274
21 Ga0070679_100047712 3300005530 Bacteria 4267
22 Ga0070697_100171666 3300005536 Bacteria 1835
23 Ga0070672_100084064 3300005543 Bacteria 2555
24 Ga0070665_100000381 3300005548 Bacteria 65638
25 Ga0070665_100003538 3300005548 Bacteria 16609
26 Ga0068855_100018109 3300005563 Bacteria 8464
27 Ga0068864_100075658 3300005618 Bacteria 2940
28 Ga0068864_100108513 3300005618 Bacteria 2470
29 Ga0068862_100043487 3300005844 Bacteria 3830
30 Ga0081538_10005274 3300005981 Bacteria 11666
31 Ga0081540_1020966 3300005983 Bacteria 3911
32 Ga0070717_10011609 3300006028 Bacteria 6697
33 Ga0070717_10018027 3300006028 Bacteria 5507
34 Ga0070717_10122852 3300006028 Bacteria 2226
35 Ga0070712_100005153 3300006175 Bacteria 8087
36 Ga0070712_100016021 3300006175 Bacteria 4836
37 Ga0070712_100056517 3300006175 Bacteria 2753
38 Ga0070712_100112730 3300006175 Bacteria 2032
39 Ga0097621_100029887 3300006237 Bacteria 4307
40 Ga0068865_100221605 3300006881 Bacteria 1479
41 Ga0075436_100128467 3300006914 Bacteria 1776
42 Ga0075435_100103561 3300007076 Bacteria 2361
43 Ga0105240_10214597 3300009093 Bacteria 2246
44 Ga0105240_10237259 3300009093 Bacteria 2116
45 Ga0111539_10000300 3300009094 Bacteria 59922
46 Ga0105245_10028019 3300009098 Bacteria 4965
47 Ga0105247_10022207 3300009101 Bacteria 3820
48 Ga0114129_10000821 3300009147 Bacteria 40021
49 Ga0114129_10130007 3300009147 Bacteria 3460
50 Ga0105248_10170452 3300009177 Bacteria 2453
51 Ga0105238_10131217 3300009551 Bacteria 2484
52 Ga0099796_10041231 3300010159 Bacteria 1562
53 Ga0157370_10011085 3300013104 Bacteria 9450
54 Ga0163163_10201454 3300014325 Bacteria 2039
55 Ga0157379_10018447 3300014968 Bacteria 6153
56 Ga0213872_10000912 3300021361 Bacteria 21096
57 Ga0213872_10046872 3300021361 Bacteria 1966
58 Ga0213876_10025906 3300021384 Bacteria 3093
59 Ga0213875_10000040 3300021388 Bacteria 156362
60 Ga0209148_1000369 3300025254 Bacteria 55603
61 Ga0209455_1000471 3300025272 Bacteria 30227
62 Ga0209676_1001155 3300025292 Bacteria 28856
63 Ga0209758_1000013 3300025297 Bacteria 873003
64 Ga0209758_1000095 3300025297 Bacteria 237870
65 Ga0207426_1031043 3300025302 Bacteria 1747
66 Ga0209257_1001205 3300025304 Bacteria 32503
67 Ga0207692_10018516 3300025898 Bacteria 3129
68 Ga0207692_10022932 3300025898 Bacteria 2881
69 Ga0207680_10005235 3300025903 Bacteria 6188
70 Ga0207699_10065627 3300025906 Bacteria 2201
71 Ga0207699_10076732 3300025906 Bacteria 2059
72 Ga0207705_10006889 3300025909 Bacteria 8397
73 Ga0207684_10047463 3300025910 Bacteria 3642
74 Ga0207707_10018840 3300025912 Bacteria 6020
75 Ga0207707_10029648 3300025912 Bacteria 4784
76 Ga0207707_10055192 3300025912 Bacteria 3456
77 Ga0207707_10056225 3300025912 Bacteria 3423
78 Ga0207693_10006351 3300025915 Bacteria 9795
79 Ga0207693_10081591 3300025915 Bacteria 2532
80 Ga0207693_10124623 3300025915 Bacteria 2024
81 Ga0207663_10084677 3300025916 Bacteria 2086
82 Ga0207660_10042823 3300025917 Bacteria 3180
83 Ga0207652_10044994 3300025921 Bacteria 3763
84 Ga0207652_10045354 3300025921 Bacteria 3748
85 Ga0207652_10048507 3300025921 Bacteria 3630
86 Ga0207681_10124857 3300025923 Bacteria 1893
87 Ga0207650_10210545 3300025925 Bacteria 1561
88 Ga0207664_10002472 3300025929 Bacteria 12235
89 Ga0207664_10021365 3300025929 Bacteria 4811
90 Ga0207664_10160944 3300025929 Bacteria 1914
91 Ga0207665_10008812 3300025939 Bacteria 6632
92 Ga0207665_10023056 3300025939 Bacteria 4100
93 Ga0207691_10002814 3300025940 Bacteria 16962
94 Ga0207711_10038375 3300025941 Bacteria 4073
95 Ga0207667_10033527 3300025949 Bacteria 5520
96 Ga0207702_10028660 3300026078 Bacteria 4629
97 Ga0207674_10088872 3300026116 Bacteria 3082
98 Ga0207675_100137108 3300026118 Bacteria 2323
99 Ga0207428_10000050 3300027907 Bacteria 177286
100 Ga0268266_10000110 3300028379 Bacteria 171840
101 Ga0268266_10002150 3300028379 Bacteria 21661
102 Ga0268265_10005935 3300028380 Bacteria 8316
103 Ga0265338_10011385 3300028800 Bacteria 10285
104 Ga0265339_10000864 3300031249 Bacteria 23286
105 Ga0265331_10001333 3300031250 Bacteria 18270
106 Ga0265327_10001788 3300031251 Bacteria 25267
107 Ga0265316_10061745 3300031344 Bacteria 2910
108 Ga0265313_10000138 3300031595 Bacteria 75121
109 Ga0265313_10000144 3300031595 Bacteria 73810
110 Ga0265314_10015470 3300031711 Bacteria 6054
111 Ga0265314_10075717 3300031711 Bacteria 2238
112 Ga0265342_10025775 3300031712 Bacteria 3691
113 Ga0307516_10117400 3300031730 Bacteria 2455
114 Ga0307412_10186746 3300031911 Unclassified 1564
115 Ga0307411_10044840 3300032005 Bacteria 2840
116 Ga0373944_0031696 3300035089 Bacteria 1593
117 Ga0373943_0035901 3300035170 Bacteria 2372
118 Ga0373927_0114303 3300035695 Bacteria 1759
119 Ga0373937_0002248 3300036401 Bacteria 16115
120 Ga0373937_0053344 3300036401 Bacteria 3709
121 Ga0395899_0021117 3300037312 Bacteria 4937
122 Ga0395900_0036344 3300037418 Bacteria 5078
123 Ga0395900_0047618 3300037418 Bacteria 4414
124 Ga0395898_0031885 3300037466 Bacteria 5262
125 Ga0395905_0027618 3300037471 Bacteria 5352
126 Ga0436364_0411364 3300037853 Bacteria 19778
127 Ga0436364_1125036 3300037853 Bacteria 39298
128 Ga0395901_0082734 3300038443 Bacteria 3354
129 Ga0395901_0131599 3300038443 Bacteria 2629
130 Ga0395901_0274052 3300038443 Bacteria 1754
131 Ga0436365_0790415 3300039437 Bacteria 6069
132 Ga0436365_0849896 3300039437 Bacteria 2048
133 Ga0436361_0024392 3300039447 Bacteria 1740
134 Ga0436361_0372681 3300039447 Bacteria 15230
135 Ga0436361_0855689 3300039447 Bacteria 2723
136 Ga0436361_1126998 3300039447 Bacteria 3405
137 Ga0436363_0899168 3300039450 Bacteria 1790
138 Ga0436362_0024354 3300039453 Bacteria 3757
139 Ga0436362_0502519 3300039453 Bacteria 1936
140 Ga0466966_0143984 3300044684 Bacteria 1455
141 Ga0466958_0001923 3300045836 Bacteria 10167
142 Ga0495638_0109881 3300046460 Bacteria 1639
143 Ga0495622_0005962 3300046557 Bacteria 5663
144 Ga0495667_0025282 3300046559 Bacteria 4002
145 Ga0496110_0142373 3300048913 Bacteria 2168
146 Ga0496111_0179047 3300048914 Bacteria 1576
147 Ga0501034_0124533 3300049571 Bacteria 2563
148 Ga0501036_0037429 3300049572 Bacteria 4104
149 Ga0501037_0016446 3300049573 Bacteria 5445
150 Ga0501038_0033992 3300049574 Bacteria 4485
151 Ga0501039_0035336 3300049575 Bacteria 3856
152 Ga0501040_0103553 3300049576 Bacteria 1987
153 Ga0501042_0005275 3300049578 Bacteria 8308
154 Ga0501043_0016231 3300049579 Bacteria 5841
155 Ga0501046_0041167 3300049580 Bacteria 3688
156 Ga0501047_0062597 3300049581 Bacteria 3588
157 Ga0501047_0098581 3300049581 Bacteria 2801
158 Ga0501047_0192916 3300049581 Bacteria 1900
159 Ga0501048_0035574 3300049582 Bacteria 3585
160 Ga0501048_0055877 3300049582 Bacteria 2802
161 Ga0501068_0052509 3300049584 Bacteria 2466
162 Ga0501070_0010452 3300049586 Bacteria 7847
163 Ga0501070_0059068 3300049586 Bacteria 3179
164 Ga0501070_0083404 3300049586 Bacteria 2646
165 Ga0501073_0094662 3300049589 Bacteria 2074
166 Ga0501080_0015573 3300049742 Bacteria 7012
167 Ga0501080_0031681 3300049742 Bacteria 4927
168 Ga0501083_0009514 3300049744 Bacteria 6864
169 Ga0501083_0030339 3300049744 Bacteria 3715
170 Ga0501035_0039177 3300049822 Bacteria 4289
171 Ga0501035_0087540 3300049822 Bacteria 2745
172 Ga0501044_0083996 3300049823 Bacteria 3218
173 Ga0501044_0167589 3300049823 Bacteria 2170
174 nmdc:mga03683_74807_c1 3300050489 Bacteria 1453
175 nmdc:mga06r32_17238_c1 3300050510 Bacteria 6593
176 nmdc:mga08y16_138614_c1 3300050511 Bacteria 2529
177 nmdc:mga08y16_164_c1 3300050511 Bacteria 57736
178 nmdc:mga0n895_133964_c1 3300050512 Bacteria 2503
179 nmdc:mga08x19_15204_c1 3300050514 Bacteria 4680
180 nmdc:mga08x19_52175_c1 3300050514 Bacteria 2629
181 Ga0495601_0035923 3300053077 Bacteria 3094
182 Ga0495601_0092342 3300053077 Bacteria 1950
183 Ga0495595_0005019 3300053084 Bacteria 5344
184 Ga0495619_0042696 3300053085 Bacteria 2970
185 Ga0500651_0006440 3300053093 Bacteria 6773
186 Ga0500651_0067316 3300053093 Bacteria 2230
187 Ga0500555_001708 3300053103 Bacteria 6602
188 Ga0500555_003911 3300053103 Bacteria 4239
189 Ga0500595_012500 3300053119 Bacteria 3282
190 Ga0500595_014065 3300053119 Bacteria 3046
191 Ga0500642_0000519 3300053130 Bacteria 11720
192 Ga0500652_000014 3300053131 Bacteria 147740
193 Ga0500568_0022660 3300053139 Bacteria 2682
194 Ga0500577_0034258 3300053142 Bacteria 1802
195 Ga0500588_0003719 3300053146 Bacteria 3244
196 Ga0500637_0013051 3300053178 Bacteria 4342
197 Ga0501084_0019082 3300054114 Bacteria 5711
198 Ga0501082_0034889 3300060353 Bacteria 4336

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049584 Ga0501068_0052509 Ga0501068_0052509_1343_2452 345
2 3300031730 Ga0307516_10117400 Ga0307516_101174003 383
3 3300006881 Ga0068865_100221605 Ga0068865_1002216052 386
4 3300053178 Ga0500637_0013051 Ga0500637_0013051_1167_2528 391
5 3300021361 Ga0213872_10000912 Ga0213872_1000091218 392
6 3300039447 Ga0436361_0024392 Ga0436361_0024392_89_1441 395
7 3300039447 Ga0436361_0372681 Ga0436361_0372681_2612_3964 395
8 3300049576 Ga0501040_0103553 Ga0501040_0103553_85_1590 395
9 3300049578 Ga0501042_0005275 Ga0501042_0005275_2632_4137 395
10 3300049582 Ga0501048_0055877 Ga0501048_0055877_1130_2635 395
11 3300049822 Ga0501035_0087540 Ga0501035_0087540_491_1996 395
12 3300005548 Ga0070665_100000381 Ga0070665_10000038113 396
13 3300028379 Ga0268266_10002150 Ga0268266_1000215011 396
14 3300021361 Ga0213872_10046872 Ga0213872_100468722 397
15 3300039447 Ga0436361_0855689 Ga0436361_0855689_113_1465 397
16 3300025912 Ga0207707_10055192 Ga0207707_100551922 398
17 3300009094 Ga0111539_10000300 Ga0111539_1000030014 406
18 3300025912 Ga0207707_10056225 Ga0207707_100562252 406
19 3300027907 Ga0207428_10000050 Ga0207428_10000050107 406
20 3300050511 nmdc:mga08y16_164_c1 nmdc:mga08y16_164_c1_53390_54745 406
21 3300005327 Ga0070658_10002265 Ga0070658_1000226512 407
22 3300005336 Ga0070680_100049395 Ga0070680_1000493953 407
23 3300005458 Ga0070681_10110970 Ga0070681_101109703 407
24 3300005530 Ga0070679_100047712 Ga0070679_1000477124 407
25 3300009093 Ga0105240_10214597 Ga0105240_102145972 407
26 3300025909 Ga0207705_10006889 Ga0207705_100068896 407
27 3300025912 Ga0207707_10029648 Ga0207707_100296484 407
28 3300025917 Ga0207660_10042823 Ga0207660_100428233 407
29 3300025921 Ga0207652_10044994 Ga0207652_100449942 407
30 3300053119 Ga0500595_014065 Ga0500595_014065_1127_2476 409
31 3300009147 Ga0114129_10000821 Ga0114129_100008216 412
32 3300025254 Ga0209148_1000369 Ga0209148_100036915 412
33 3300025272 Ga0209455_1000471 Ga0209455_100047117 412
34 3300050510 nmdc:mga06r32_17238_c1 nmdc:mga06r32_17238_c1_528_1862 412
35 3300037312 Ga0395899_0021117 Ga0395899_0021117_3371_4741 413
36 3300037418 Ga0395900_0047618 Ga0395900_0047618_197_1567 413
37 3300037466 Ga0395898_0031885 Ga0395898_0031885_364_1734 413
38 3300038443 Ga0395901_0274052 Ga0395901_0274052_21_1391 413
39 3300006237 Ga0097621_100029887 Ga0097621_1000298874 414
40 3300046557 Ga0495622_0005962 Ga0495622_0005962_2406_3743 414
41 3300049572 Ga0501036_0037429 Ga0501036_0037429_1757_3121 414
42 3300049574 Ga0501038_0033992 Ga0501038_0033992_983_2347 414
43 3300049575 Ga0501039_0035336 Ga0501039_0035336_527_1891 414
44 3300049579 Ga0501043_0016231 Ga0501043_0016231_1951_3315 414
45 3300049822 Ga0501035_0039177 Ga0501035_0039177_2398_3762 414
46 3300054114 Ga0501084_0019082 Ga0501084_0019082_2046_3410 414
47 3300031250 Ga0265331_10001333 Ga0265331_1000133315 415
48 3300031595 Ga0265313_10000138 Ga0265313_1000013819 415
49 3300045836 Ga0466958_0001923 Ga0466958_0001923_7052_8392 415
50 3300014968 Ga0157379_10018447 Ga0157379_100184475 416
51 3300003215 JGI25153J46596_10001205 JGI25153J46596_100012059 417
52 3300005530 Ga0070679_100047576 Ga0070679_1000475762 417
53 3300010159 Ga0099796_10041231 Ga0099796_100412311 417
54 3300025292 Ga0209676_1001155 Ga0209676_100115515 417
55 3300025297 Ga0209758_1000013 Ga0209758_1000013232 417
56 3300025921 Ga0207652_10048507 Ga0207652_100485073 417
57 3300025925 Ga0207650_10210545 Ga0207650_102105451 417
58 3300028800 Ga0265338_10011385 Ga0265338_1001138511 417
59 3300031344 Ga0265316_10061745 Ga0265316_100617454 417
60 3300031711 Ga0265314_10015470 Ga0265314_100154704 417
61 3300031711 Ga0265314_10075717 Ga0265314_100757172 417
62 3300031712 Ga0265342_10025775 Ga0265342_100257751 417
63 3300005548 Ga0070665_100003538 Ga0070665_10000353813 418
64 3300028379 Ga0268266_10000110 Ga0268266_10000110111 418
65 3300053119 Ga0500595_012500 Ga0500595_012500_1622_2959 418
66 3300005335 Ga0070666_10000275 Ga0070666_100002756 420
67 3300005563 Ga0068855_100018109 Ga0068855_1000181096 420
68 3300009177 Ga0105248_10170452 Ga0105248_101704522 420
69 3300025903 Ga0207680_10005235 Ga0207680_100052355 420
70 3300025941 Ga0207711_10038375 Ga0207711_100383753 420
71 3300025949 Ga0207667_10033527 Ga0207667_100335275 420
72 3300031251 Ga0265327_10001788 Ga0265327_1000178826 422
73 3300036401 Ga0373937_0002248 Ga0373937_0002248_3535_4884 422
74 3300049573 Ga0501037_0016446 Ga0501037_0016446_2692_4056 422
75 3300049582 Ga0501048_0035574 Ga0501048_0035574_72_1436 422
76 3300049586 Ga0501070_0010452 Ga0501070_0010452_1449_2813 422
77 3300049742 Ga0501080_0015573 Ga0501080_0015573_4499_5863 422
78 3300049823 Ga0501044_0083996 Ga0501044_0083996_984_2348 422
79 3300053077 Ga0495601_0092342 Ga0495601_0092342_387_1736 422
80 3300005536 Ga0070697_100171666 Ga0070697_1001716662 423
81 3300031911 Ga0307412_10186746 Ga0307412_101867462 423
82 3300049571 Ga0501034_0124533 Ga0501034_0124533_461_1810 423
83 3300049586 Ga0501070_0083404 Ga0501070_0083404_919_2268 423
84 3300031249 Ga0265339_10000864 Ga0265339_1000086422 424
85 3300031595 Ga0265313_10000144 Ga0265313_1000014437 424
86 3300038443 Ga0395901_0131599 Ga0395901_0131599_1071_2441 424
87 3300049586 Ga0501070_0059068 Ga0501070_0059068_1549_2892 425
88 3300049744 Ga0501083_0009514 Ga0501083_0009514_2547_3890 425
89 3300060353 Ga0501082_0034889 Ga0501082_0034889_1896_3239 425
90 3300037471 Ga0395905_0027618 Ga0395905_0027618_1760_3109 426
91 3300009093 Ga0105240_10237259 Ga0105240_102372592 429
92 3300009551 Ga0105238_10131217 Ga0105238_101312172 429
93 3300037418 Ga0395900_0036344 Ga0395900_0036344_1723_3060 429
94 3300038443 Ga0395901_0082734 Ga0395901_0082734_1879_3216 429
95 3300053103 Ga0500555_001708 Ga0500555_001708_1174_2511 429
96 3300014325 Ga0163163_10201454 Ga0163163_102014542 430
97 3300039437 Ga0436365_0849896 Ga0436365_0849896_201_1547 430
98 3300005330 Ga0070690_100076445 Ga0070690_1000764452 431
99 3300005981 Ga0081538_10005274 Ga0081538_1000527411 431
100 3300009147 Ga0114129_10130007 Ga0114129_101300072 431
101 3300025923 Ga0207681_10124857 Ga0207681_101248571 431
102 3300026118 Ga0207675_100137108 Ga0207675_1001371082 431
103 3300028380 Ga0268265_10005935 Ga0268265_100059356 431
104 3300032005 Ga0307411_10044840 Ga0307411_100448403 431
105 3300050511 nmdc:mga08y16_138614_c1 nmdc:mga08y16_138614_c1_361_1716 431
106 3300035695 Ga0373927_0114303 Ga0373927_0114303_67_1413 432
107 3300050514 nmdc:mga08x19_52175_c1 nmdc:mga08x19_52175_c1_102_1448 432
108 iso_pu_bacteria 2937843397 2937844247 432
109 3300003215 JGI25153J46596_10000059 JGI25153J46596_10000059118 433
110 3300005333 Ga0070677_10001790 Ga0070677_100017905 433
111 3300005338 Ga0068868_100012626 Ga0068868_1000126262 433
112 3300005434 Ga0070709_10005164 Ga0070709_100051645 433
113 3300005434 Ga0070709_10046296 Ga0070709_100462962 433
114 3300005435 Ga0070714_100085676 Ga0070714_1000856762 433
115 3300005437 Ga0070710_10101357 Ga0070710_101013572 433
116 3300005471 Ga0070698_100049042 Ga0070698_1000490422 433
117 3300005543 Ga0070672_100084064 Ga0070672_1000840642 433
118 3300005618 Ga0068864_100108513 Ga0068864_1001085132 433
119 3300005844 Ga0068862_100043487 Ga0068862_1000434873 433
120 3300005983 Ga0081540_1020966 Ga0081540_10209663 433
121 3300006028 Ga0070717_10011609 Ga0070717_100116093 433
122 3300006028 Ga0070717_10018027 Ga0070717_100180273 433
123 3300006028 Ga0070717_10122852 Ga0070717_101228522 433
124 3300006175 Ga0070712_100016021 Ga0070712_1000160213 433
125 3300006175 Ga0070712_100112730 Ga0070712_1001127302 433
126 3300009101 Ga0105247_10022207 Ga0105247_100222074 433
127 3300021384 Ga0213876_10025906 Ga0213876_100259064 433
128 3300021388 Ga0213875_10000040 Ga0213875_1000004091 433
129 3300025297 Ga0209758_1000095 Ga0209758_1000095115 433
130 3300025302 Ga0207426_1031043 Ga0207426_10310431 433
131 3300025304 Ga0209257_1001205 Ga0209257_100120523 433
132 3300025898 Ga0207692_10018516 Ga0207692_100185162 433
133 3300025906 Ga0207699_10076732 Ga0207699_100767322 433
134 3300025915 Ga0207693_10006351 Ga0207693_100063514 433
135 3300025915 Ga0207693_10081591 Ga0207693_100815912 433
136 3300025916 Ga0207663_10084677 Ga0207663_100846772 433
137 3300025929 Ga0207664_10021365 Ga0207664_100213651 433
138 3300025939 Ga0207665_10008812 Ga0207665_100088125 433
139 3300037853 Ga0436364_0411364 Ga0436364_0411364_13304_14680 433
140 3300039437 Ga0436365_0790415 Ga0436365_0790415_2421_3797 433
141 3300046460 Ga0495638_0109881 Ga0495638_0109881_35_1384 433
142 3300049580 Ga0501046_0041167 Ga0501046_0041167_580_1929 433
143 3300049581 Ga0501047_0062597 Ga0501047_0062597_14_1363 433
144 3300049589 Ga0501073_0094662 Ga0501073_0094662_644_1993 433
145 3300049742 Ga0501080_0031681 Ga0501080_0031681_2020_3369 433
146 3300049744 Ga0501083_0030339 Ga0501083_0030339_1506_2855 433
147 3300053093 Ga0500651_0006440 Ga0500651_0006440_706_2055 433
148 3300053093 Ga0500651_0067316 Ga0500651_0067316_780_2129 433
149 3300053103 Ga0500555_003911 Ga0500555_003911_1779_3128 433
150 3300053130 Ga0500642_0000519 Ga0500642_0000519_9580_10929 433
151 3300053131 Ga0500652_000014 Ga0500652_000014_86696_88045 433
152 3300053139 Ga0500568_0022660 Ga0500568_0022660_368_1720 433
153 3300053142 Ga0500577_0034258 Ga0500577_0034258_338_1687 433
154 3300053146 Ga0500588_0003719 Ga0500588_0003719_306_1655 433
155 3300002459 JGI24751J29686_10010963 JGI24751J29686_100109631 434
156 3300005336 Ga0070680_100010347 Ga0070680_1000103473 434
157 3300005435 Ga0070714_100001011 Ga0070714_1000010116 434
158 3300005468 Ga0070707_100056630 Ga0070707_1000566304 434
159 3300005530 Ga0070679_100004355 Ga0070679_1000043558 434
160 3300005618 Ga0068864_100075658 Ga0068864_1000756582 434
161 3300006175 Ga0070712_100005153 Ga0070712_1000051533 434
162 3300006175 Ga0070712_100056517 Ga0070712_1000565172 434
163 3300006914 Ga0075436_100128467 Ga0075436_1001284672 434
164 3300007076 Ga0075435_100103561 Ga0075435_1001035612 434
165 3300009098 Ga0105245_10028019 Ga0105245_100280192 434
166 3300013104 Ga0157370_10011085 Ga0157370_100110858 434
167 3300025898 Ga0207692_10022932 Ga0207692_100229322 434
168 3300025906 Ga0207699_10065627 Ga0207699_100656272 434
169 3300025910 Ga0207684_10047463 Ga0207684_100474632 434
170 3300025912 Ga0207707_10018840 Ga0207707_100188402 434
171 3300025915 Ga0207693_10124623 Ga0207693_101246232 434
172 3300025921 Ga0207652_10045354 Ga0207652_100453543 434
173 3300025929 Ga0207664_10002472 Ga0207664_100024725 434
174 3300025929 Ga0207664_10160944 Ga0207664_101609442 434
175 3300025939 Ga0207665_10023056 Ga0207665_100230562 434
176 3300025940 Ga0207691_10002814 Ga0207691_100028142 434
177 3300026078 Ga0207702_10028660 Ga0207702_100286603 434
178 3300026116 Ga0207674_10088872 Ga0207674_100888722 434
179 3300035089 Ga0373944_0031696 Ga0373944_0031696_55_1416 434
180 3300035170 Ga0373943_0035901 Ga0373943_0035901_891_2252 434
181 3300036401 Ga0373937_0053344 Ga0373937_0053344_1693_3054 434
182 3300037853 Ga0436364_1125036 Ga0436364_1125036_18138_19499 434
183 3300039447 Ga0436361_1126998 Ga0436361_1126998_1177_2538 434
184 3300039450 Ga0436363_0899168 Ga0436363_0899168_359_1720 434
185 3300039453 Ga0436362_0024354 Ga0436362_0024354_2361_3722 434
186 3300039453 Ga0436362_0502519 Ga0436362_0502519_401_1762 434
187 3300044684 Ga0466966_0143984 Ga0466966_0143984_40_1392 434
188 3300046559 Ga0495667_0025282 Ga0495667_0025282_2524_3885 434
189 3300048913 Ga0496110_0142373 Ga0496110_0142373_41_1402 434
190 3300048914 Ga0496111_0179047 Ga0496111_0179047_25_1386 434
191 3300049581 Ga0501047_0098581 Ga0501047_0098581_1298_2650 434
192 3300049581 Ga0501047_0192916 Ga0501047_0192916_75_1433 434
193 3300049823 Ga0501044_0167589 Ga0501044_0167589_656_2014 434
194 3300050489 nmdc:mga03683_74807_c1 nmdc:mga03683_74807_c1_84_1436 434
195 3300050512 nmdc:mga0n895_133964_c1 nmdc:mga0n895_133964_c1_152_1513 434
196 3300050514 nmdc:mga08x19_15204_c1 nmdc:mga08x19_15204_c1_1099_2460 434
197 3300053077 Ga0495601_0035923 Ga0495601_0035923_1566_2927 434
198 3300053084 Ga0495595_0005019 Ga0495595_0005019_3182_4543 434
199 3300053085 Ga0495619_0042696 Ga0495619_0042696_200_1561 434

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19289

PmbA_TldD_3rd

PmbA/TldA metallopeptidase C-terminal domain

255

471

0.99

PF01523

PmbA_TldD_1st

PmbA/TldA metallopeptidase domain 1

51

115

0.94

PF19290

PmbA_TldD_2nd

PmbA/TldA metallopeptidase central domain

142

248

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qtd-assembly2.cif.gz_B crystal structure of putative modulator of gyrase (pmba) from pseudomonas aeruginosa pao1 0.9578 8 428
3tv9-assembly1.cif.gz_A-2 crystal structure of putative peptide maturation protein from shigella flexneri 0.952 7 425
5njc-assembly2.cif.gz_D e. coli microcin-processing metalloprotease tldd/e (tldd e263a mutant) with hexapeptide bound 0.948 7 429
3qtd-assembly2.cif.gz_B crystal structure of putative modulator of gyrase (pmba) from pseudomonas aeruginosa pao1 0.9382 8 428
5njc-assembly2.cif.gz_D e. coli microcin-processing metalloprotease tldd/e (tldd e263a mutant) with hexapeptide bound 0.9329 7 429
ID Description Score Start End Superfamily
3qtdD01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.9253 8 221 3.30.2290.10
3tv9A01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.9047 7 222 3.30.2290.10
1vpbA01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8872 12 221 3.30.2290.10
3qtdD01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8777 8 221 3.30.2290.10
3tv9A01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8776 7 222 3.30.2290.10
ID Description Score Start End GO Terms
AF-A0A3D5UTK7-F1-model_v4 Modulator protein 0.9844 232 429 GO:0005829
GO:0006508
GO:0008237
AF-A0A3C1FMG8-F1-model_v4 Modulator protein 0.984 218 399 GO:0005829
GO:0006508
GO:0008237
AF-A0A529K334-F1-model_v4 TldD/PmbA family protein 0.9811 228 429 GO:0005829
GO:0006508
GO:0008237
AF-A0A349J4G0-F1-model_v4 Modulator protein 0.9787 246 429 GO:0005829
GO:0006508
GO:0008237
AF-A0A2M8DHI5-F1-model_v4 Metalloprotease TldD/E C-terminal domain-containing protein 0.9782 194 429 GO:0005829
GO:0006508
GO:0008237

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pLDDT pTM Quality
92.65 0.89 High
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Predicted Structure (AlphaFold2)

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