F303728

General Info

Members Datasets Scaffolds Average Seq Length
197 149 394 441

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2893684298|2893685001
Length 485
Sequence PRWTRTLTDLRSSQDAYLDVVATGPGRSVAGALGLPAPVSLTRHEAGRPEKPRTVLVIADESSSADADALAQALSARGHDVRRDAQAVAEGSERIQAALLVLSQAHGPSDLTAPSLSLGSVLRRLDRGARVVAVSRAAEGVAAGSAVAVSASAVEAGTESVRRNAARQGAVGLVRSLAQEMRGGATANGIVVADGVAVDAPSVLGGLDFLLSGRSAFVSGQFLPVTSEAGPASLAQAALGETPLEGRVIVVTGAARGIGEQIARLLHAQGAQVVPIDVPAAGDALAKLANAIGAASLPLDVTADDAGQRILEHCRTRFGRIDGIVHNAGITRDKMLANMDEGRFASVQAVNVEAPLRITQQLLADPLAQGLRVVGLASTSGIAGNRGQTNYAVSKAGVVGMVAALAPELAAGGGTANAVAPGFIETEMTAKIPMARRQVARRLNSLQQGGLPVDVAEAIAFLLSDAAAGISGQTLRVCGQNLVGA

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
27 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
28 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
43 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
44 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
57 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
58 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
59 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
60 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
61 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
62 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
63 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
64 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
65 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
66 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
67 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
68 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
69 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
70 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
71 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
84 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
85 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
123 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
124 2739367653 Kocuria sp. OV113 Isolate Unclassified
125 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
126 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
127 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
128 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
129 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
130 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
131 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
132 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
133 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
134 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
135 2857727296 Kocuria sp. R-72562 Isolate Unclassified
136 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
137 2920879853 Kocuria salina CV6 Isolate Unclassified
138 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
139 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
140 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
141 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
142 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
143 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
144 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
145 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
146 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
147 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
148 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
149 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.76
Metatranscriptomes 2.03
Isolates 14.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.03
Nodule 0
Rhizoplane 8.12
Rhizosphere 78.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000511 3300000549 Bacteria 6394
2 LJQas_1000901 3300000549 Bacteria 4621
3 JGI24735J21928_10007146 3300002067 Bacteria 3645
4 JGI25152J39213_1000177 3300002773 Bacteria 42950
5 Ga0006562J51391_1025318 3300003578 Bacteria 2124
6 Ga0065714_10082246 3300005288 Bacteria 2320
7 Ga0070670_100114193 3300005331 Bacteria 2328
8 Ga0068869_100100868 3300005334 Bacteria 2183
9 Ga0070669_100090671 3300005353 Bacteria 2291
10 Ga0070671_100188579 3300005355 Bacteria 1747
11 Ga0070672_100020295 3300005543 Bacteria 4844
12 Ga0068856_100012935 3300005614 Bacteria 8078
13 Ga0068852_100031111 3300005616 Bacteria 4400
14 Ga0068859_100121975 3300005617 Bacteria 2673
15 Ga0068859_100229721 3300005617 Bacteria 1943
16 Ga0068862_100074353 3300005844 Bacteria 2937
17 Ga0075432_10002029 3300006058 Bacteria 6734
18 Ga0097620_100121975 3300006931 Bacteria 2673
19 Ga0097620_100229722 3300006931 Bacteria 1943
20 Ga0105245_10059476 3300009098 Bacteria 3441
21 Ga0105248_10415806 3300009177 Bacteria 1514
22 Ga0105239_10012496 3300010375 Bacteria 9458
23 Ga0157373_10007733 3300013100 Bacteria 7991
24 Ga0157369_10064048 3300013105 Bacteria 3960
25 Ga0157369_10321582 3300013105 Bacteria 1608
26 Ga0163162_10105118 3300013306 Bacteria 2918
27 Ga0157375_10096103 3300013308 Bacteria 3035
28 Ga0163163_10031255 3300014325 Bacteria 5138
29 Ga0209148_1002757 3300025254 Bacteria 5547
30 Ga0209129_1000067 3300025258 Bacteria 219974
31 Ga0209025_1001150 3300025294 Bacteria 37667
32 Ga0207697_10015420 3300025315 Bacteria 3159
33 Ga0207647_10039819 3300025904 Bacteria 2962
34 Ga0207645_10015780 3300025907 Bacteria 5008
35 Ga0207659_10166212 3300025926 Bacteria 1736
36 Ga0207691_10000545 3300025940 Bacteria 37727
37 Ga0207667_10015926 3300025949 Bacteria 8515
38 Ga0207668_10032113 3300025972 Bacteria 3466
39 Ga0207702_10029189 3300026078 Bacteria 4588
40 Ga0207702_10132907 3300026078 Bacteria 2241
41 Ga0207683_10009131 3300026121 Bacteria 8450
42 Ga0207698_10022125 3300026142 Bacteria 4411
43 Ga0307408_100004357 3300031548 Bacteria 9615
44 Ga0307408_100019980 3300031548 Bacteria 4514
45 Ga0307408_100022173 3300031548 Bacteria 4310
46 Ga0307408_100034071 3300031548 Bacteria 3563
47 Ga0307408_100036543 3300031548 Bacteria 3454
48 Ga0307405_10003466 3300031731 Bacteria 7246
49 Ga0307405_10022398 3300031731 Bacteria 3572
50 Ga0307405_10036985 3300031731 Bacteria 2930
51 Ga0307413_10114139 3300031824 Bacteria 1815
52 Ga0307410_10002045 3300031852 Bacteria 9525
53 Ga0307410_10049252 3300031852 Bacteria 2827
54 Ga0307406_10008559 3300031901 Bacteria 5713
55 Ga0307407_10019089 3300031903 Bacteria 3484
56 Ga0307407_10043309 3300031903 Bacteria 2530
57 Ga0307412_10000630 3300031911 Bacteria 20565
58 Ga0307412_10006082 3300031911 Bacteria 6796
59 Ga0307412_10015955 3300031911 Bacteria 4463
60 Ga0307412_10105129 3300031911 Bacteria 2004
61 Ga0307409_100001667 3300031995 Bacteria 11161
62 Ga0307409_100091169 3300031995 Bacteria 2497
63 Ga0307416_100012961 3300032002 Bacteria 5644
64 Ga0307416_100016664 3300032002 Bacteria 5116
65 Ga0307416_100309429 3300032002 Bacteria 1575
66 Ga0307414_10027543 3300032004 Bacteria 3675
67 Ga0307415_100066689 3300032126 Bacteria 2513
68 Ga0373927_0123877 3300035695 Bacteria 1687
69 Ga0373925_0054732 3300037068 Bacteria 2985
70 Ga0395899_0031513 3300037312 Bacteria 3984
71 Ga0395899_0084080 3300037312 Bacteria 2313
72 Ga0395900_0030804 3300037418 Bacteria 5509
73 Ga0395898_0036053 3300037466 Bacteria 4914
74 Ga0395898_0100591 3300037466 Bacteria 2776
75 Ga0395901_0017207 3300038443 Bacteria 7376
76 Ga0395901_0094848 3300038443 Bacteria 3126
77 Ga0395901_0218148 3300038443 Bacteria 1994
78 Ga0436365_0035700 3300039437 Bacteria 3328
79 Ga0439436_0000409 3300041404 Bacteria 10782
80 Ga0439436_0004487 3300041404 Bacteria 4280
81 Ga0439436_0016849 3300041404 Bacteria 2190
82 Ga0439436_0022194 3300041404 Bacteria 1881
83 Ga0439438_000665 3300041405 Bacteria 15457
84 Ga0439438_012444 3300041405 Bacteria 2609
85 Ga0439439_0006314 3300041406 Bacteria 2739
86 Ga0439466_0001548 3300041411 Bacteria 8988
87 Ga0439433_0000269 3300041999 Bacteria 8798
88 Ga0439433_0001186 3300041999 Bacteria 5353
89 Ga0439433_0004334 3300041999 Bacteria 3058
90 Ga0439433_0013251 3300041999 Bacteria 1809
91 Ga0439442_000013 3300042002 Bacteria 48856
92 Ga0439442_000075 3300042002 Bacteria 23367
93 Ga0439442_001004 3300042002 Bacteria 5699
94 Ga0439432_011699 3300042006 Bacteria 3018
95 Ga0439449_0007435 3300042007 Bacteria 4166
96 Ga0439449_0014780 3300042007 Bacteria 2933
97 Ga0439452_001535 3300042010 Bacteria 9296
98 Ga0450919_001288 3300042121 Bacteria 3276
99 Ga0450920_001499 3300042122 Bacteria 3872
100 Ga0450907_000059 3300042146 Bacteria 43871
101 Ga0439446_0024855 3300042156 Bacteria 1711
102 Ga0450909_001397 3300042185 Bacteria 3359
103 Ga0439434_0000507 3300042435 Bacteria 11105
104 Ga0439434_0001198 3300042435 Bacteria 7466
105 Ga0439434_0008809 3300042435 Bacteria 2965
106 Ga0450918_000241 3300042531 Bacteria 12493
107 Ga0450918_000813 3300042531 Bacteria 6548
108 Ga0466963_0005549 3300044694 Bacteria 7390
109 Ga0466963_0016683 3300044694 Bacteria 4569
110 Ga0466963_0085303 3300044694 Bacteria 2144
111 Ga0466970_0014543 3300044765 Bacteria 4043
112 Ga0466970_0025637 3300044765 Bacteria 3088
113 Ga0466960_0003035 3300044901 Bacteria 6410
114 Ga0466967_0000506 3300045976 Bacteria 19040
115 Ga0466967_0007054 3300045976 Bacteria 8049
116 Ga0466967_0121235 3300045976 Bacteria 2416
117 Ga0495653_0007132 3300046463 Bacteria 9159
118 Ga0495639_0015859 3300046475 Bacteria 3267
119 Ga0495662_0008154 3300046476 Bacteria 5161
120 Ga0495594_0016613 3300046499 Bacteria 3880
121 Ga0495630_0085104 3300046517 Bacteria 2387
122 Ga0495631_0028538 3300046518 Bacteria 2545
123 Ga0495643_0028942 3300046522 Bacteria 3102
124 Ga0495665_0000608 3300046531 Bacteria 18224
125 Ga0495586_0000834 3300046535 Bacteria 17681
126 Ga0495587_0001954 3300046536 Bacteria 13740
127 Ga0495645_0007843 3300046543 Bacteria 7429
128 Ga0495667_0001259 3300046559 Bacteria 16597
129 Ga0495656_0002164 3300046615 Bacteria 6501
130 Ga0495670_0000848 3300046691 Bacteria 14774
131 Ga0495600_0009137 3300046809 Bacteria 6113
132 Ga0495600_0105311 3300046809 Bacteria 1838
133 Ga0495581_0005090 3300047315 Bacteria 7613
134 Ga0495680_0013717 3300047322 Bacteria 7053
135 Ga0495675_0004544 3300047444 Bacteria 8411
136 Ga0496100_0005695 3300048903 Bacteria 6739
137 Ga0496100_0079274 3300048903 Bacteria 2212
138 Ga0496101_0014127 3300048904 Bacteria 5362
139 Ga0496102_0000558 3300048905 Bacteria 39827
140 Ga0496103_0005486 3300048906 Bacteria 7583
141 Ga0496105_0229589 3300048908 Bacteria 1508
142 Ga0496106_0003071 3300048909 Bacteria 12451
143 Ga0496108_0029041 3300048911 Bacteria 4576
144 Ga0496109_0133820 3300048912 Bacteria 2316
145 Ga0496109_0224629 3300048912 Bacteria 1766
146 Ga0496110_0021082 3300048913 Bacteria 5508
147 Ga0496111_0005753 3300048914 Bacteria 8000
148 Ga0496112_0062898 3300048915 Bacteria 3662
149 Ga0496112_0138508 3300048915 Bacteria 2403
150 Ga0496113_0045241 3300048916 Bacteria 3264
151 Ga0496114_0123900 3300048917 Bacteria 2225
152 Ga0496119_0000022 3300048922 Bacteria 269878
153 Ga0496120_0001243 3300048923 Bacteria 32177
154 Ga0496124_0142088 3300048927 Bacteria 1893
155 Ga0496126_0000003 3300048929 Bacteria 961576
156 Ga0496126_0083409 3300048929 Bacteria 2821
157 Ga0501317_005454 3300049533 Bacteria 1363
158 Ga0501325_000842 3300049541 Bacteria 1680
159 Ga0501325_003241 3300049541 Bacteria 1173
160 Ga0501032_0034433 3300049569 Bacteria 3468
161 Ga0501032_0094264 3300049569 Bacteria 1985
162 Ga0501033_0080656 3300049570 Bacteria 2387
163 Ga0501034_0102284 3300049571 Bacteria 2858
164 Ga0501036_0002703 3300049572 Bacteria 14003
165 Ga0501038_0004848 3300049574 Bacteria 12502
166 Ga0501047_0127368 3300049581 Bacteria 2426
167 Ga0501073_0053111 3300049589 Bacteria 2837
168 Ga0501035_0035915 3300049822 Bacteria 4495
169 Ga0501044_0070568 3300049823 Bacteria 3553
170 2893685001 2893684298 Bacteria 2897960
171 2691513881 2690315906 Bacteria 4517044
172 2739603863 2739367653 Bacteria 2780952
173 2775656891 2775506735 Bacteria 4556596
174 2808831146 2808606357 Bacteria 4466944
175 2808852410 2808606360 Bacteria 4404006
176 2808879298 2808606366 Bacteria 4415912
177 2808891201 2808606370 Bacteria 4942454
178 2808896456 2808606371 Bacteria 4251511
179 2812321156 2811994871 Bacteria 4497550
180 2817509592 2816332305 Bacteria 2697803
181 2848553233 2848551377 Bacteria 3720646
182 2857711692 2857710386 Bacteria 3186771
183 2857729100 2857727296 Bacteria 2745552
184 2919394744 2919391150 Bacteria 4884741
185 2920883614 2920879853 Bacteria 4216831
186 2939601294 2939598168 Bacteria 4687164
187 2945918911 2945916053 Bacteria 4555517
188 2945920721 2945920336 Bacteria 4501603
189 2945943094 2945941187 Bacteria 4682474
190 2945959167 2945956166 Bacteria 5110334
191 2946025884 2946024296 Bacteria 3508095
192 2946038986 2946037020 Bacteria 4900426
193 2946062768 2946059875 Bacteria 4386623
194 2954000392 2953998280 Bacteria 4812144
195 2974306897 2974302888 Bacteria 4369871
196 2990091316 2990088156 Bacteria 6657676
197 8054107850 8054107350 Bacteria 5022511
198 LJQas_1000511
199 LJQas_1000901
200 JGI24735J21928_10007146
201 JGI25152J39213_1000177
202 Ga0006562J51391_1025318
203 Ga0065714_10082246
204 Ga0070670_100114193
205 Ga0068869_100100868
206 Ga0070669_100090671
207 Ga0070671_100188579
208 Ga0070672_100020295
209 Ga0068856_100012935
210 Ga0068852_100031111
211 Ga0068859_100121975
212 Ga0068859_100229721
213 Ga0068862_100074353
214 Ga0075432_10002029
215 Ga0097620_100121975
216 Ga0097620_100229722
217 Ga0105245_10059476
218 Ga0105248_10415806
219 Ga0105239_10012496
220 Ga0157373_10007733
221 Ga0157369_10064048
222 Ga0157369_10321582
223 Ga0163162_10105118
224 Ga0157375_10096103
225 Ga0163163_10031255
226 Ga0209148_1002757
227 Ga0209129_1000067
228 Ga0209025_1001150
229 Ga0207697_10015420
230 Ga0207647_10039819
231 Ga0207645_10015780
232 Ga0207659_10166212
233 Ga0207691_10000545
234 Ga0207667_10015926
235 Ga0207668_10032113
236 Ga0207702_10029189
237 Ga0207702_10132907
238 Ga0207683_10009131
239 Ga0207698_10022125
240 Ga0307408_100004357
241 Ga0307408_100019980
242 Ga0307408_100022173
243 Ga0307408_100034071
244 Ga0307408_100036543
245 Ga0307405_10003466
246 Ga0307405_10022398
247 Ga0307405_10036985
248 Ga0307413_10114139
249 Ga0307410_10002045
250 Ga0307410_10049252
251 Ga0307406_10008559
252 Ga0307407_10019089
253 Ga0307407_10043309
254 Ga0307412_10000630
255 Ga0307412_10006082
256 Ga0307412_10015955
257 Ga0307412_10105129
258 Ga0307409_100001667
259 Ga0307409_100091169
260 Ga0307416_100012961
261 Ga0307416_100016664
262 Ga0307416_100309429
263 Ga0307414_10027543
264 Ga0307415_100066689
265 Ga0373927_0123877
266 Ga0373925_0054732
267 Ga0395899_0031513
268 Ga0395899_0084080
269 Ga0395900_0030804
270 Ga0395898_0036053
271 Ga0395898_0100591
272 Ga0395901_0017207
273 Ga0395901_0094848
274 Ga0395901_0218148
275 Ga0436365_0035700
276 Ga0439436_0000409
277 Ga0439436_0004487
278 Ga0439436_0016849
279 Ga0439436_0022194
280 Ga0439438_000665
281 Ga0439438_012444
282 Ga0439439_0006314
283 Ga0439466_0001548
284 Ga0439433_0000269
285 Ga0439433_0001186
286 Ga0439433_0004334
287 Ga0439433_0013251
288 Ga0439442_000013
289 Ga0439442_000075
290 Ga0439442_001004
291 Ga0439432_011699
292 Ga0439449_0007435
293 Ga0439449_0014780
294 Ga0439452_001535
295 Ga0450919_001288
296 Ga0450920_001499
297 Ga0450907_000059
298 Ga0439446_0024855
299 Ga0450909_001397
300 Ga0439434_0000507
301 Ga0439434_0001198
302 Ga0439434_0008809
303 Ga0450918_000241
304 Ga0450918_000813
305 Ga0466963_0005549
306 Ga0466963_0016683
307 Ga0466963_0085303
308 Ga0466970_0014543
309 Ga0466970_0025637
310 Ga0466960_0003035
311 Ga0466967_0000506
312 Ga0466967_0007054
313 Ga0466967_0121235
314 Ga0495653_0007132
315 Ga0495639_0015859
316 Ga0495662_0008154
317 Ga0495594_0016613
318 Ga0495630_0085104
319 Ga0495631_0028538
320 Ga0495643_0028942
321 Ga0495665_0000608
322 Ga0495586_0000834
323 Ga0495587_0001954
324 Ga0495645_0007843
325 Ga0495667_0001259
326 Ga0495656_0002164
327 Ga0495670_0000848
328 Ga0495600_0009137
329 Ga0495600_0105311
330 Ga0495581_0005090
331 Ga0495680_0013717
332 Ga0495675_0004544
333 Ga0496100_0005695
334 Ga0496100_0079274
335 Ga0496101_0014127
336 Ga0496102_0000558
337 Ga0496103_0005486
338 Ga0496105_0229589
339 Ga0496106_0003071
340 Ga0496108_0029041
341 Ga0496109_0133820
342 Ga0496109_0224629
343 Ga0496110_0021082
344 Ga0496111_0005753
345 Ga0496112_0062898
346 Ga0496112_0138508
347 Ga0496113_0045241
348 Ga0496114_0123900
349 Ga0496119_0000022
350 Ga0496120_0001243
351 Ga0496124_0142088
352 Ga0496126_0000003
353 Ga0496126_0083409
354 Ga0501317_005454
355 Ga0501325_000842
356 Ga0501325_003241
357 Ga0501032_0034433
358 Ga0501032_0094264
359 Ga0501033_0080656
360 Ga0501034_0102284
361 Ga0501036_0002703
362 Ga0501038_0004848
363 Ga0501047_0127368
364 Ga0501073_0053111
365 Ga0501035_0035915
366 Ga0501044_0070568
367 2893685001
368 2691513881
369 2739603863
370 2775656891
371 2808831146
372 2808852410
373 2808879298
374 2808891201
375 2808896456
376 2812321156
377 2817509592
378 2848553233
379 2857711692
380 2857729100
381 2919394744
382 2920883614
383 2939601294
384 2945918911
385 2945920721
386 2945943094
387 2945959167
388 2946025884
389 2946038986
390 2946062768
391 2954000392
392 2974306897
393 2990091316
394 8054107850

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

253

479

0.98

PF00106

adh_short

short chain dehydrogenase

247

437

0.92

PF08659

KR

KR domain

247

425

0.85

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

249

478

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3v1t-assembly1.cif.gz_D crystal structure of a putative ketoacyl reductase (fabg4) from mycobacterium tuberculosis h37rv at 1.9 angstrom resolution 0.9629 24 446
3m1l-assembly1.cif.gz_B crystal structure of a c-terminal trunacted mutant of a putative ketoacyl reductase (fabg4) from mycobacterium tuberculosis h37rv at 2.5 angstrom resolution 0.9624 28 439
3m1l-assembly1.cif.gz_A crystal structure of a c-terminal trunacted mutant of a putative ketoacyl reductase (fabg4) from mycobacterium tuberculosis h37rv at 2.5 angstrom resolution 0.9607 28 439
3v1t-assembly1.cif.gz_D crystal structure of a putative ketoacyl reductase (fabg4) from mycobacterium tuberculosis h37rv at 1.9 angstrom resolution 0.9606 24 446
3v1t-assembly1.cif.gz_C crystal structure of a putative ketoacyl reductase (fabg4) from mycobacterium tuberculosis h37rv at 1.9 angstrom resolution 0.9603 24 446
ID Description Score Start End Superfamily
af_I6Y778_208_454_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9618 201 446 3.40.50.720
3m1lB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.96 193 439 3.40.50.720
af_I6Y778_208_454_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9543 201 446 3.40.50.720
3m1lB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9509 193 439 3.40.50.720
1ulsC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9311 204 440 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7K0E0C1-F1-model_v4 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase (EC 1.3.1.87) 0.9598 3 446 GO:0016616
GO:0018498
AF-A0A7K0E0C1-F1-model_v4 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase (EC 1.3.1.87) 0.9514 3 446 GO:0016616
GO:0018498
AF-A0A416UBQ0-F1-model_v4 deleted 0.9394 203 444
AF-A0A416UBQ0-F1-model_v4 deleted 0.9319 203 444
AF-A0A6B3D965-F1-model_v4 deleted 0.9318 211 438

Map