F303521

General Info

Members Datasets Scaffolds Average Seq Length
197 161 197 275

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0034972|Ga0496108_0034972_57_995
Length 312
Sequence MGEPAMRIQAPAKLNLCLFLGPVRADGLHELCSLFEPLALADSIRVAEAERDEVHCPGVEGENLAARALAALRARGWDGPPLRLEIEKRTPVAAGLGGGSADAAAVLRLVRDGLAGRIAGGEKATAIGDLENVAAELGADVPSQLVPALSLVGGAGERVERLPEPANHAVVLLPSGGGLSTAAVFTEADRLGLSRPAEELEELAACLREMAGAGASPLEYAELLANDLEPAARSLRPEIGDALDALRDAGAPLVFMSGSGPTAVGLFPDLSAARHAATQLDPDHQPSLHPPAHMAGKRKLDEVIVCEAGRAP

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
82 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
83 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
84 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
89 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
158 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
159 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
160 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
161 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.02
Nodule 0
Rhizoplane 9.64
Rhizosphere 88.32
Stem 0
Stem Tuber 0
Unclassified 1.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000388 3300002074 Bacteria 4977
2 Ga0070683_100045112 3300005329 Bacteria 4069
3 Ga0070683_100240801 3300005329 Bacteria 1721
4 Ga0070677_10000036 3300005333 Bacteria 40479
5 Ga0070680_100001208 3300005336 Bacteria 18611
6 Ga0070682_100108089 3300005337 Bacteria 1849
7 Ga0070660_100003511 3300005339 Bacteria 10801
8 Ga0070691_10000834 3300005341 Bacteria 12413
9 Ga0070691_10001598 3300005341 Bacteria 9799
10 Ga0070661_100000005 3300005344 Bacteria 220455
11 Ga0070661_100151593 3300005344 Bacteria 1752
12 Ga0070674_100000006 3300005356 Bacteria 150063
13 Ga0070659_100007109 3300005366 Bacteria 8118
14 Ga0070714_100029983 3300005435 Bacteria 4526
15 Ga0070681_10004140 3300005458 Bacteria 13718
16 Ga0068867_100000127 3300005459 Bacteria 49103
17 Ga0070679_100017914 3300005530 Bacteria 6861
18 Ga0070684_100227642 3300005535 Bacteria 1702
19 Ga0068853_100106882 3300005539 Bacteria 2481
20 Ga0070686_100077648 3300005544 Bacteria 2190
21 Ga0070695_100158701 3300005545 Bacteria 1585
22 Ga0070693_100001257 3300005547 Bacteria 11474
23 Ga0070693_100220293 3300005547 Bacteria 1243
24 Ga0070665_100420104 3300005548 Bacteria 1346
25 Ga0070664_100318891 3300005564 Bacteria 1408
26 Ga0068857_100147206 3300005577 Bacteria 2131
27 Ga0068854_100136425 3300005578 Bacteria 1879
28 Ga0068856_100066636 3300005614 Bacteria 3558
29 Ga0068852_100000005 3300005616 Bacteria 173127
30 Ga0068852_100004652 3300005616 Bacteria 9729
31 Ga0068852_100151059 3300005616 Bacteria 2160
32 Ga0068863_100002636 3300005841 Bacteria 17760
33 Ga0068863_100064092 3300005841 Bacteria 3475
34 Ga0068858_100283872 3300005842 Bacteria 1577
35 Ga0068860_100097653 3300005843 Bacteria 2800
36 Ga0081455_10022173 3300005937 Bacteria 5942
37 Ga0081540_1000106 3300005983 Bacteria 89767
38 Ga0081539_10001198 3300005985 Bacteria 46744
39 Ga0070715_10000011 3300006163 Bacteria 183857
40 Ga0075430_100240547 3300006846 Bacteria 1500
41 Ga0075433_10000047 3300006852 Bacteria 50752
42 Ga0105240_10181802 3300009093 Bacteria 2481
43 Ga0111539_10010371 3300009094 Bacteria 11730
44 Ga0105245_10000147 3300009098 Bacteria 66496
45 Ga0105245_10006992 3300009098 Bacteria 9898
46 Ga0105247_10003781 3300009101 Bacteria 9815
47 Ga0114129_10019573 3300009147 Bacteria 9635
48 Ga0105243_10290086 3300009148 Unclassified 1478
49 Ga0105242_10000535 3300009176 Bacteria 29996
50 Ga0105237_10194675 3300009545 Bacteria 2027
51 Ga0105238_10012681 3300009551 Bacteria 8507
52 Ga0105239_10280660 3300010375 Bacteria 1875
53 Ga0157370_10001761 3300013104 Bacteria 26694
54 Ga0157370_10008697 3300013104 Bacteria 10925
55 Ga0157369_10057243 3300013105 Bacteria 4206
56 Ga0157374_10287724 3300013296 Bacteria 1623
57 Ga0157372_10021819 3300013307 Bacteria 6921
58 Ga0157380_10000273 3300014326 Bacteria 31035
59 Ga0157379_10025661 3300014968 Bacteria 5237
60 Ga0163161_10000018 3300017792 Bacteria 228801
61 Ga0163161_10015470 3300017792 Bacteria 5319
62 Ga0206353_11076368 3300020082 Bacteria 3001
63 Ga0207682_10000019 3300025893 Bacteria 64989
64 Ga0207710_10001943 3300025900 Bacteria 9876
65 Ga0207680_10076805 3300025903 Bacteria 2087
66 Ga0207671_10199563 3300025914 Bacteria 1562
67 Ga0207660_10009103 3300025917 Bacteria 6430
68 Ga0207649_10000005 3300025920 Bacteria 356179
69 Ga0207652_10013371 3300025921 Bacteria 6646
70 Ga0207694_10122485 3300025924 Bacteria 2077
71 Ga0207687_10000026 3300025927 Bacteria 173968
72 Ga0207687_10003691 3300025927 Bacteria 10305
73 Ga0207664_10137565 3300025929 Bacteria 2063
74 Ga0207690_10022119 3300025932 Bacteria 3951
75 Ga0207686_10000032 3300025934 Bacteria 150341
76 Ga0207686_10017419 3300025934 Bacteria 4049
77 Ga0207709_10180402 3300025935 Unclassified 1490
78 Ga0207670_10066010 3300025936 Bacteria 2485
79 Ga0207669_10000010 3300025937 Bacteria 150070
80 Ga0207669_10118388 3300025937 Bacteria 1792
81 Ga0207661_10087665 3300025944 Bacteria 2585
82 Ga0207679_10035288 3300025945 Bacteria 3537
83 Ga0207640_10008463 3300025981 Bacteria 5717
84 Ga0207677_10000497 3300026023 Bacteria 25525
85 Ga0207702_10111276 3300026078 Bacteria 2435
86 Ga0207641_10009406 3300026088 Bacteria 8052
87 Ga0207641_10054988 3300026088 Bacteria 3380
88 Ga0207648_10016843 3300026089 Bacteria 6664
89 Ga0207674_10055774 3300026116 Bacteria 4016
90 Ga0207698_10000038 3300026142 Bacteria 101918
91 Ga0207698_10003740 3300026142 Bacteria 9195
92 Ga0207698_10048460 3300026142 Bacteria 3226
93 Ga0207428_10078107 3300027907 Bacteria 2590
94 Ga0268266_10315662 3300028379 Bacteria 1461
95 Ga0268265_10318214 3300028380 Bacteria 1408
96 Ga0268264_10092097 3300028381 Bacteria 2616
97 Ga0265337_1003856 3300028556 Bacteria 6365
98 Ga0265326_10000186 3300028558 Bacteria 31511
99 Ga0265319_1000479 3300028563 Bacteria 28161
100 Ga0265322_10000001 3300028654 Bacteria 543854
101 Ga0265336_10044302 3300028666 Bacteria 1354
102 Ga0265338_10001275 3300028800 Bacteria 41452
103 Ga0265324_10000133 3300029957 Bacteria 58695
104 Ga0265328_10004550 3300031239 Bacteria 6014
105 Ga0265320_10000002 3300031240 Bacteria 542875
106 Ga0265325_10010006 3300031241 Bacteria 5510
107 Ga0265331_10006056 3300031250 Bacteria 7202
108 Ga0265331_10020165 3300031250 Bacteria 3428
109 Ga0265327_10000011 3300031251 Bacteria 543807
110 Ga0265316_10034368 3300031344 Bacteria 4119
111 Ga0265314_10000224 3300031711 Bacteria 84325
112 Ga0307405_10040919 3300031731 Bacteria 2810
113 Ga0307413_10007241 3300031824 Bacteria 5135
114 Ga0307410_10009454 3300031852 Bacteria 5465
115 Ga0307410_10123255 3300031852 Bacteria 1893
116 Ga0307406_10083015 3300031901 Bacteria 2136
117 Ga0307406_10140401 3300031901 Bacteria 1709
118 Ga0307407_10087332 3300031903 Bacteria 1902
119 Ga0307409_100024703 3300031995 Bacteria 4197
120 Ga0307416_100146735 3300032002 Bacteria 2155
121 Ga0307414_10081067 3300032004 Bacteria 2375
122 Ga0495592_0021837 3300046454 Bacteria 4870
123 Ga0495603_0000207 3300046455 Bacteria 30314
124 Ga0495603_0000650 3300046455 Bacteria 19609
125 Ga0495629_0008838 3300046459 Bacteria 7406
126 Ga0495629_0191592 3300046459 Bacteria 1415
127 Ga0495641_0024185 3300046461 Bacteria 3002
128 Ga0495651_0063076 3300046462 Bacteria 2834
129 Ga0495651_0139963 3300046462 Bacteria 1756
130 Ga0495651_0252442 3300046462 Bacteria 1204
131 Ga0495653_0020360 3300046463 Bacteria 5380
132 Ga0495662_0032986 3300046476 Bacteria 2502
133 Ga0495594_0000007 3300046499 Bacteria 160047
134 Ga0495608_0000707 3300046511 Bacteria 23232
135 Ga0495618_0000075 3300046514 Bacteria 70236
136 Ga0495628_0000061 3300046516 Bacteria 86531
137 Ga0495628_0029587 3300046516 Bacteria 4439
138 Ga0495630_0000283 3300046517 Bacteria 40931
139 Ga0495644_0000201 3300046523 Bacteria 28023
140 Ga0495652_0000003 3300046529 Bacteria 597094
141 Ga0495652_0185333 3300046529 Bacteria 1593
142 Ga0495586_0082710 3300046535 Bacteria 1766
143 Ga0495587_0071808 3300046536 Bacteria 2013
144 Ga0495645_0008237 3300046543 Bacteria 7269
145 Ga0495622_0000050 3300046557 Bacteria 106111
146 Ga0495667_0000022 3300046559 Bacteria 176919
147 Ga0495667_0069653 3300046559 Bacteria 2296
148 Ga0495656_0000182 3300046615 Bacteria 22447
149 Ga0495634_0000063 3300046642 Bacteria 86878
150 Ga0495634_0230157 3300046642 Bacteria 1141
151 Ga0495625_0000029 3300046660 Bacteria 244646
152 Ga0495647_0000015 3300046681 Bacteria 86790
153 Ga0495647_0000206 3300046681 Bacteria 15880
154 Ga0495624_0000298 3300046690 Bacteria 39145
155 Ga0495600_0008308 3300046809 Bacteria 6371
156 Ga0495676_0000729 3300047321 Bacteria 27371
157 Ga0495676_0016160 3300047321 Bacteria 6630
158 Ga0495676_0064411 3300047321 Bacteria 2851
159 Ga0495680_0008227 3300047322 Bacteria 9502
160 Ga0495614_0145333 3300048089 Bacteria 1055
161 Ga0496100_0000012 3300048903 Bacteria 182426
162 Ga0496101_0000010 3300048904 Bacteria 281990
163 Ga0496102_0000045 3300048905 Bacteria 186726
164 Ga0496103_0000050 3300048906 Bacteria 152034
165 Ga0496104_0000168 3300048907 Bacteria 58020
166 Ga0496104_0037233 3300048907 Bacteria 4550
167 Ga0496105_0099227 3300048908 Unclassified 2405
168 Ga0496106_0000017 3300048909 Bacteria 181561
169 Ga0496107_0000012 3300048910 Bacteria 181629
170 Ga0496108_0000178 3300048911 Bacteria 58913
171 Ga0496108_0034972 3300048911 Bacteria 4174
172 Ga0496109_0000286 3300048912 Bacteria 47952
173 Ga0496109_0139587 3300048912 Unclassified 2266
174 Ga0496111_0322727 3300048914 Bacteria 1144
175 Ga0496112_0000003 3300048915 Bacteria 660147
176 Ga0496113_0035333 3300048916 Bacteria 3654
177 Ga0496114_0000003 3300048917 Bacteria 630981
178 Ga0496115_0000020 3300048918 Bacteria 171995
179 Ga0496115_0000036 3300048918 Bacteria 127774
180 Ga0496116_0000138 3300048919 Bacteria 151606
181 Ga0496119_0006492 3300048922 Bacteria 10799
182 Ga0501039_0052514 3300049575 Bacteria 3154
183 Ga0501070_0020237 3300049586 Bacteria 5581
184 Ga0501070_0186662 3300049586 Unclassified 1705
185 Ga0501076_0040699 3300049592 Bacteria 3653
186 nmdc:mga05p37_14631_c1 3300050507 Bacteria 9426
187 nmdc:mga0qj67_55614_c1 3300050509 Bacteria 3135
188 nmdc:mga08y16_93481_c1 3300050511 Bacteria 3133
189 nmdc:mga0rr50_502464_c1 3300050513 Bacteria 1031
190 nmdc:mga0a205_1_c2 3300050515 Bacteria 266330
191 Ga0495601_0013924 3300053077 Bacteria 4843
192 Ga0495655_0000004 3300053083 Bacteria 293683
193 Ga0495595_0000099 3300053084 Bacteria 39785
194 Ga0495619_0000001 3300053085 Bacteria 586054
195 Ga0495619_0279049 3300053085 Bacteria 1158
196 Ga0500566_0009395 3300053094 Bacteria 5780
197 Ga0500628_000004 3300053129 Bacteria 202098

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0020237 Ga0501070_0020237_2711_3547 234
2 3300046461 Ga0495641_0024185 Ga0495641_0024185_1954_2793 237
3 3300013104 Ga0157370_10001761 Ga0157370_100017612 244
4 3300053083 Ga0495655_0000004 Ga0495655_0000004_120548_121378 244
5 3300053129 Ga0500628_000004 Ga0500628_000004_28963_29793 244
6 3300005983 Ga0081540_1000106 Ga0081540_100010690 248
7 3300046499 Ga0495594_0000007 Ga0495594_0000007_43507_44340 249
8 3300046557 Ga0495622_0000050 Ga0495622_0000050_91064_91897 249
9 3300046463 Ga0495653_0020360 Ga0495653_0020360_1988_2818 250
10 3300005616 Ga0068852_100000005 Ga0068852_100000005101 252
11 3300026023 Ga0207677_10000497 Ga0207677_1000049712 252
12 3300026142 Ga0207698_10000038 Ga0207698_1000003822 252
13 3300046660 Ga0495625_0000029 Ga0495625_0000029_160847_161695 252
14 3300048918 Ga0496115_0000020 Ga0496115_0000020_138343_139173 253
15 3300009176 Ga0105242_10000535 Ga0105242_1000053531 255
16 3300025934 Ga0207686_10000032 Ga0207686_10000032121 255
17 3300048919 Ga0496116_0000138 Ga0496116_0000138_139135_140046 256
18 3300048922 Ga0496119_0006492 Ga0496119_0006492_5995_6906 256
19 3300005616 Ga0068852_100151059 Ga0068852_1001510593 258
20 3300026142 Ga0207698_10048460 Ga0207698_100484603 258
21 3300048911 Ga0496108_0000178 Ga0496108_0000178_50682_51518 259
22 3300048912 Ga0496109_0000286 Ga0496109_0000286_23292_24128 259
23 3300050509 nmdc:mga0qj67_55614_c1 nmdc:mga0qj67_55614_c1_372_1226 260
24 3300046516 Ga0495628_0000061 Ga0495628_0000061_33577_34410 261
25 3300048907 Ga0496104_0037233 Ga0496104_0037233_1110_1949 261
26 3300046642 Ga0495634_0000063 Ga0495634_0000063_39971_40807 262
27 3300046690 Ga0495624_0000298 Ga0495624_0000298_2810_3649 262
28 3300006852 Ga0075433_10000047 Ga0075433_1000004746 263
29 3300009094 Ga0111539_10010371 Ga0111539_1001037111 263
30 3300009147 Ga0114129_10019573 Ga0114129_100195736 263
31 3300027907 Ga0207428_10078107 Ga0207428_100781072 263
32 3300028380 Ga0268265_10318214 Ga0268265_103182142 263
33 3300031731 Ga0307405_10040919 Ga0307405_100409192 263
34 3300031824 Ga0307413_10007241 Ga0307413_100072414 263
35 3300031852 Ga0307410_10009454 Ga0307410_100094546 263
36 3300031901 Ga0307406_10083015 Ga0307406_100830152 263
37 3300031903 Ga0307407_10087332 Ga0307407_100873322 263
38 3300031995 Ga0307409_100024703 Ga0307409_1000247034 263
39 3300032002 Ga0307416_100146735 Ga0307416_1001467352 263
40 3300047321 Ga0495676_0064411 Ga0495676_0064411_1972_2802 263
41 3300050507 nmdc:mga05p37_14631_c1 nmdc:mga05p37_14631_c1_3138_3941 263
42 3300050511 nmdc:mga08y16_93481_c1 nmdc:mga08y16_93481_c1_2039_2842 263
43 3300050515 nmdc:mga0a205_1_c2 nmdc:mga0a205_1_c2_194008_194838 263
44 3300005435 Ga0070714_100029983 Ga0070714_1000299834 266
45 3300025929 Ga0207664_10137565 Ga0207664_101375652 266
46 3300028563 Ga0265319_1000479 Ga0265319_100047920 267
47 3300028800 Ga0265338_10001275 Ga0265338_100012758 267
48 3300031241 Ga0265325_10010006 Ga0265325_100100067 267
49 3300031250 Ga0265331_10020165 Ga0265331_100201652 267
50 3300046529 Ga0495652_0185333 Ga0495652_0185333_321_1169 268
51 3300005329 Ga0070683_100045112 Ga0070683_1000451124 270
52 3300005336 Ga0070680_100001208 Ga0070680_10000120813 270
53 3300005337 Ga0070682_100108089 Ga0070682_1001080893 270
54 3300005339 Ga0070660_100003511 Ga0070660_1000035119 270
55 3300005344 Ga0070661_100151593 Ga0070661_1001515932 270
56 3300005366 Ga0070659_100007109 Ga0070659_1000071092 270
57 3300005458 Ga0070681_10004140 Ga0070681_1000414010 270
58 3300005530 Ga0070679_100017914 Ga0070679_1000179146 270
59 3300005539 Ga0068853_100106882 Ga0068853_1001068822 270
60 3300005577 Ga0068857_100147206 Ga0068857_1001472063 270
61 3300005578 Ga0068854_100136425 Ga0068854_1001364253 270
62 3300005614 Ga0068856_100066636 Ga0068856_1000666364 270
63 3300005616 Ga0068852_100004652 Ga0068852_10000465211 270
64 3300009093 Ga0105240_10181802 Ga0105240_101818022 270
65 3300009545 Ga0105237_10194675 Ga0105237_101946752 270
66 3300009551 Ga0105238_10012681 Ga0105238_100126812 270
67 3300010375 Ga0105239_10280660 Ga0105239_102806602 270
68 3300013104 Ga0157370_10008697 Ga0157370_100086972 270
69 3300013105 Ga0157369_10057243 Ga0157369_100572435 270
70 3300013307 Ga0157372_10021819 Ga0157372_100218195 270
71 3300020082 Ga0206353_11076368 Ga0206353_110763683 270
72 3300025914 Ga0207671_10199563 Ga0207671_101995632 270
73 3300025917 Ga0207660_10009103 Ga0207660_100091039 270
74 3300025921 Ga0207652_10013371 Ga0207652_100133715 270
75 3300025924 Ga0207694_10122485 Ga0207694_101224852 270
76 3300025932 Ga0207690_10022119 Ga0207690_100221193 270
77 3300025944 Ga0207661_10087665 Ga0207661_100876652 270
78 3300026078 Ga0207702_10111276 Ga0207702_101112763 270
79 3300026116 Ga0207674_10055774 Ga0207674_100557744 270
80 3300026142 Ga0207698_10003740 Ga0207698_1000374010 270
81 3300046514 Ga0495618_0000075 Ga0495618_0000075_39438_40289 270
82 3300046809 Ga0495600_0008308 Ga0495600_0008308_1135_1986 270
83 3300048905 Ga0496102_0000045 Ga0496102_0000045_107230_108060 270
84 3300048906 Ga0496103_0000050 Ga0496103_0000050_43973_44803 270
85 3300005843 Ga0068860_100097653 Ga0068860_1000976532 273
86 3300009098 Ga0105245_10000147 Ga0105245_1000014737 274
87 3300025927 Ga0207687_10000026 Ga0207687_10000026147 274
88 3300048915 Ga0496112_0000003 Ga0496112_0000003_344412_345272 274
89 3300005329 Ga0070683_100240801 Ga0070683_1002408012 276
90 3300005341 Ga0070691_10001598 Ga0070691_1000159810 276
91 3300005356 Ga0070674_100000006 Ga0070674_100000006122 276
92 3300005544 Ga0070686_100077648 Ga0070686_1000776481 276
93 3300005545 Ga0070695_100158701 Ga0070695_1001587012 276
94 3300005547 Ga0070693_100220293 Ga0070693_1002202932 276
95 3300005841 Ga0068863_100002636 Ga0068863_10000263615 276
96 3300005841 Ga0068863_100064092 Ga0068863_1000640922 276
97 3300005842 Ga0068858_100283872 Ga0068858_1002838722 276
98 3300009101 Ga0105247_10003781 Ga0105247_100037819 276
99 3300009148 Ga0105243_10290086 Ga0105243_102900862 276
100 3300013296 Ga0157374_10287724 Ga0157374_102877242 276
101 3300014968 Ga0157379_10025661 Ga0157379_100256615 276
102 3300017792 Ga0163161_10015470 Ga0163161_100154703 276
103 3300025900 Ga0207710_10001943 Ga0207710_100019439 276
104 3300025903 Ga0207680_10076805 Ga0207680_100768052 276
105 3300025934 Ga0207686_10017419 Ga0207686_100174192 276
106 3300025935 Ga0207709_10180402 Ga0207709_101804022 276
107 3300025936 Ga0207670_10066010 Ga0207670_100660102 276
108 3300025937 Ga0207669_10000010 Ga0207669_1000001037 276
109 3300026088 Ga0207641_10009406 Ga0207641_100094068 276
110 3300026088 Ga0207641_10054988 Ga0207641_100549884 276
111 3300028381 Ga0268264_10092097 Ga0268264_100920972 276
112 3300028556 Ga0265337_1003856 Ga0265337_10038566 276
113 3300028558 Ga0265326_10000186 Ga0265326_1000018630 276
114 3300028654 Ga0265322_10000001 Ga0265322_100000014 276
115 3300028666 Ga0265336_10044302 Ga0265336_100443022 276
116 3300029957 Ga0265324_10000133 Ga0265324_1000013359 276
117 3300031239 Ga0265328_10004550 Ga0265328_100045506 276
118 3300031240 Ga0265320_10000002 Ga0265320_100000024 276
119 3300031250 Ga0265331_10006056 Ga0265331_100060564 276
120 3300031251 Ga0265327_10000011 Ga0265327_100000114 276
121 3300031344 Ga0265316_10034368 Ga0265316_100343683 276
122 3300031711 Ga0265314_10000224 Ga0265314_1000022488 276
123 3300046454 Ga0495592_0021837 Ga0495592_0021837_966_1811 276
124 3300046455 Ga0495603_0000207 Ga0495603_0000207_23208_24038 276
125 3300046459 Ga0495629_0008838 Ga0495629_0008838_3938_4768 276
126 3300046462 Ga0495651_0139963 Ga0495651_0139963_192_1037 276
127 3300046462 Ga0495651_0252442 Ga0495651_0252442_254_1084 276
128 3300046529 Ga0495652_0000003 Ga0495652_0000003_176258_177088 276
129 3300046536 Ga0495587_0071808 Ga0495587_0071808_1097_1927 276
130 3300046559 Ga0495667_0000022 Ga0495667_0000022_86133_86963 276
131 3300046559 Ga0495667_0069653 Ga0495667_0069653_1146_2009 276
132 3300047321 Ga0495676_0000729 Ga0495676_0000729_25982_26812 276
133 3300047321 Ga0495676_0016160 Ga0495676_0016160_2756_3586 276
134 3300047322 Ga0495680_0008227 Ga0495680_0008227_6469_7299 276
135 3300048089 Ga0495614_0145333 Ga0495614_0145333_149_1009 276
136 3300048903 Ga0496100_0000012 Ga0496100_0000012_104202_105032 276
137 3300048904 Ga0496101_0000010 Ga0496101_0000010_177173_178003 276
138 3300048909 Ga0496106_0000017 Ga0496106_0000017_103914_104744 276
139 3300048910 Ga0496107_0000012 Ga0496107_0000012_76812_77642 276
140 3300048917 Ga0496114_0000003 Ga0496114_0000003_161302_162132 276
141 3300048918 Ga0496115_0000036 Ga0496115_0000036_107636_108466 276
142 3300049586 Ga0501070_0186662 Ga0501070_0186662_817_1677 276
143 3300053085 Ga0495619_0279049 Ga0495619_0279049_295_1125 276
144 3300053094 Ga0500566_0009395 Ga0500566_0009395_2656_3486 276
145 3300006846 Ga0075430_100240547 Ga0075430_1002405472 277
146 3300025981 Ga0207640_10008463 Ga0207640_100084635 277
147 3300005937 Ga0081455_10022173 Ga0081455_100221735 278
148 3300046516 Ga0495628_0029587 Ga0495628_0029587_782_1618 278
149 3300046543 Ga0495645_0008237 Ga0495645_0008237_5332_6168 278
150 3300005333 Ga0070677_10000036 Ga0070677_1000003620 279
151 3300005344 Ga0070661_100000005 Ga0070661_10000000544 279
152 3300005459 Ga0068867_100000127 Ga0068867_10000012722 279
153 3300005548 Ga0070665_100420104 Ga0070665_1004201042 279
154 3300005985 Ga0081539_10001198 Ga0081539_1000119826 279
155 3300009098 Ga0105245_10006992 Ga0105245_100069929 279
156 3300014326 Ga0157380_10000273 Ga0157380_1000027323 279
157 3300025893 Ga0207682_10000019 Ga0207682_1000001955 279
158 3300025920 Ga0207649_10000005 Ga0207649_10000005188 279
159 3300025927 Ga0207687_10003691 Ga0207687_100036918 279
160 3300026089 Ga0207648_10016843 Ga0207648_100168438 279
161 3300028379 Ga0268266_10315662 Ga0268266_103156622 279
162 3300046459 Ga0495629_0191592 Ga0495629_0191592_431_1270 279
163 3300046462 Ga0495651_0063076 Ga0495651_0063076_1178_2017 279
164 3300046517 Ga0495630_0000283 Ga0495630_0000283_17050_17889 279
165 3300046523 Ga0495644_0000201 Ga0495644_0000201_11064_11903 279
166 3300046681 Ga0495647_0000206 Ga0495647_0000206_3051_3890 279
167 3300049575 Ga0501039_0052514 Ga0501039_0052514_95_949 279
168 3300049592 Ga0501076_0040699 Ga0501076_0040699_1540_2388 279
169 3300053077 Ga0495601_0013924 Ga0495601_0013924_2748_3587 279
170 3300006163 Ga0070715_10000011 Ga0070715_10000011129 282
171 3300025937 Ga0207669_10118388 Ga0207669_101183882 282
172 3300031852 Ga0307410_10123255 Ga0307410_101232552 282
173 3300031901 Ga0307406_10140401 Ga0307406_101404012 282
174 3300032004 Ga0307414_10081067 Ga0307414_100810672 282
175 3300046455 Ga0495603_0000650 Ga0495603_0000650_9277_10125 282
176 3300046476 Ga0495662_0032986 Ga0495662_0032986_1091_1939 282
177 3300048907 Ga0496104_0000168 Ga0496104_0000168_26214_27062 282
178 3300048908 Ga0496105_0099227 Ga0496105_0099227_1440_2333 282
179 3300048914 Ga0496111_0322727 Ga0496111_0322727_246_1094 282
180 3300005535 Ga0070684_100227642 Ga0070684_1002276422 283
181 3300005564 Ga0070664_100318891 Ga0070664_1003188912 283
182 3300017792 Ga0163161_10000018 Ga0163161_1000001843 283
183 3300025945 Ga0207679_10035288 Ga0207679_100352882 283
184 3300046511 Ga0495608_0000707 Ga0495608_0000707_7680_8531 283
185 3300046615 Ga0495656_0000182 Ga0495656_0000182_5928_6779 283
186 3300050513 nmdc:mga0rr50_502464_c1 nmdc:mga0rr50_502464_c1_161_1012 283
187 3300053084 Ga0495595_0000099 Ga0495595_0000099_15716_16567 283
188 3300053085 Ga0495619_0000001 Ga0495619_0000001_53928_54779 283
189 3300046681 Ga0495647_0000015 Ga0495647_0000015_18349_19215 286
190 3300005341 Ga0070691_10000834 Ga0070691_100008344 288
191 3300048911 Ga0496108_0034972 Ga0496108_0034972_57_995 288
192 3300048912 Ga0496109_0139587 Ga0496109_0139587_55_993 288
193 3300048916 Ga0496113_0035333 Ga0496113_0035333_1306_2244 288
194 3300005547 Ga0070693_100001257 Ga0070693_10000125712 289
195 3300046535 Ga0495586_0082710 Ga0495586_0082710_250_1125 289
196 3300046642 Ga0495634_0230157 Ga0495634_0230157_89_964 289
197 3300002074 JGI24748J21848_1000388 JGI24748J21848_10003884 316

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08544

GHMP_kinases_C

GHMP kinases C terminal

197

285

0.83

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

63

147

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2v2q-assembly1.cif.gz_A ispe in complex with ligand 0.863 4 306
2v2q-assembly1.cif.gz_A ispe in complex with ligand 0.8571 4 306
4emd-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 0.8287 4 316
4emd-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 0.8234 4 316
1uek-assembly1.cif.gz_A crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol kinase 0.8208 6 309
ID Description Score Start End Superfamily
2v2qB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8874 4 179 3.30.230.10
2v2qB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8766 4 179 3.30.230.10
4dxlA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8421 1 179 3.30.230.10
af_Q8S2G0_72_245_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8392 5 179 3.30.230.10
af_Q2G0S8_1_157_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8187 6 178 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A538A4X1-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9411 4 316 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A538A4X1-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9378 4 316 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A7V9LFU7-F1-model_v4 GHMP kinase C-terminal domain-containing protein 0.9366 170 316 GO:0050515
AF-A0A7V9HBQ1-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9077 5 297 GO:0005524
GO:0016114
GO:0050515
AF-A0A7V9LFU7-F1-model_v4 GHMP kinase C-terminal domain-containing protein 0.9069 170 316 GO:0050515

Feature Viewer

pLDDT pTM Quality
87.16 0.85 High
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Predicted Structure (AlphaFold2)

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