F303090

General Info

Members Datasets Scaffolds Average Seq Length
197 152 165 1033

Family's Representative Sequence

Representative Sequence 3300025242|Ga0209258_100156|Ga0209258_100156135
Length 1130
Sequence MQLHDDVKAMPVNWLYSTKIKYGIVALRIRTGYFRQRKMLLVMKMIVILLTIACLQVNAAGYAQKLSLSLKDRPLEEVLKEIKAKTGYKFFYRLDLLSNAKNVSIRIDNADLSYVLDMIFKDQPFTYQIVNKTIIVKSRLHADLMEEAIRPEVTVTGRVTDDKGHPLPGVSVQVKGTSKGAQTNANGEYQLAGIDANAILIFSYLGYQPQELPLNGRNSISVSLVSSSIGLGDVVVVGYGKQSRKNLISAVNTVKADELNKGAITDVGQLLQGKVPGLNVSASGDPNAVATVVLRGASTLNSSQGPFYVIDGVPGVDISAIAPDDIASIDVLKDAAATAIYGNRAANGVIMVTTKKGKKGQTEVAYSGYVGIEKVSNKLDMMDAGELRAFLTKNGQSFSPTDDKNANTNWQTSIQRNQAISHNHNISFSGGGEHGTYAASLNYTKKEGILLNSDLERVVARLSVEQYALNDKVRFGLNVTNSNSTANDIPYRNVVLLQSALHLPVSPIKNPNGSYFENFTTQGYYNPLAMLNNSQMNDKYNNLVGSFNTQVKLPFGLTYDLNLSYIGFTSLHGEFYDKYFTSNYNSMYDNPNPGLGYHNPQTFGANGQAMRSSYQNTSKILETFLTWNRNFKLHAVNLVLGYSWQNNKVGEGFQVTTSNFPVDNVGYSNLALSNPYAISGFQIGFGPDGVYQENRLISNFARLNYGYNDKYLLQASIRRDGSSVFGENHQWGYFPSVGVAWRIIQEEFMKKQSVFTDLKLRASYGITGNATGFNAYTAKFISGTQGVYYYNGSSLAAGGPIQAANPNLQWEKTSTANIGVDFTVLKGRLSGSVDVYNKKTTGMIYSYRVDPILVPAGTIVANGGSMSNKGIELSLNATVIDHKDFSWTSSINFAHNKNEITSLSNPLFSGGDSVLLAFPEGPGQSSHSLEILKEGKPLGQFFSLIYAGKDANGISQYVGGDGKLTITPAIGSDYHYIGNSQPKLLMGWSNSFHYKNLDLSIFLRGVFGNKIFNATRADLFRPNTAQYTNILKDAGSESVADYNAYLYSSRFVENGSYVRFDNATLSYNFKHLGPYIKNVRVYVTGNNLFVITSFKGTDPEVNQGGIAPGVDYNNFYPKTRTFLFGVNVSF

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
5 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
6 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
7 2738541278 Niastella sp. CF465 Isolate Unclassified
8 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
9 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
10 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
11 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
12 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
13 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
14 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
15 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
16 2818991444 Filimonas endophytica 3197 Isolate Unclassified
17 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
18 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
19 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
20 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
21 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
22 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
23 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
24 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
25 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
26 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
27 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
28 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
29 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
30 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
31 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
32 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
33 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
34 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
35 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
36 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
37 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
38 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
41 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
42 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
115 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
116 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
137 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
138 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
139 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
140 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
146 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
147 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
150 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
151 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
152 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.76
Metatranscriptomes 0
Isolates 16.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.77
Nodule 1.02
Rhizoplane 0
Rhizosphere 62.94
Stem 0
Stem Tuber 0
Unclassified 18.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000688 3300001989 Bacteria 12233
2 JGI25162J39368_1000005 3300002737 Bacteria 435925
3 JGI25154J39366_1000008 3300002738 Bacteria 315375
4 JGI25153J46596_10008307 3300003215 Unclassified 4983
5 rootH2_10006838 3300003320 Bacteria 63494
6 rootH1_10001378 3300003323 Bacteria 19211
7 rootH1_10031752 3300003323 Bacteria 16360
8 Ga0055526_1004281 3300003771 Bacteria 8643
9 Ga0055528_1002117 3300003790 Bacteria 10966
10 Ga0055530_10003556 3300003791 Bacteria 8776
11 Ga0065165_1001254 3300005262 Bacteria 28743
12 Ga0065165_1002746 3300005262 Bacteria 14030
13 Ga0068869_100019470 3300005334 Bacteria 4639
14 Ga0070666_10000048 3300005335 Bacteria 102191
15 Ga0068868_100000765 3300005338 Bacteria 21740
16 Ga0070667_100022381 3300005367 Bacteria 5243
17 Ga0070663_100001874 3300005455 Bacteria 11740
18 Ga0068853_100000798 3300005539 Bacteria 21880
19 Ga0070665_100000041 3300005548 Bacteria 297849
20 Ga0068855_100023911 3300005563 Bacteria 7317
21 Ga0068857_100006166 3300005577 Bacteria 10249
22 Ga0068852_100001214 3300005616 Bacteria 17120
23 Ga0068852_100004748 3300005616 Bacteria 9648
24 Ga0068859_100000051 3300005617 Bacteria 131188
25 Ga0068864_100003673 3300005618 Bacteria 12681
26 Ga0068860_100000383 3300005843 Bacteria 57999
27 Ga0075366_10002426 3300006195 Bacteria 9557
28 Ga0097621_100002209 3300006237 Bacteria 13323
29 Ga0097621_100008855 3300006237 Bacteria 7276
30 Ga0068871_100006453 3300006358 Bacteria 8303
31 Ga0097620_100000051 3300006931 Bacteria 131188
32 Ga0099824_1002532 3300006942 Bacteria 26760
33 Ga0105240_10000224 3300009093 Bacteria 113175
34 Ga0105240_10015668 3300009093 Bacteria 10294
35 Ga0105240_10025972 3300009093 Bacteria 7692
36 Ga0105247_10011254 3300009101 Bacteria 5396
37 Ga0105241_10000493 3300009174 Bacteria 29814
38 Ga0105241_10002190 3300009174 Bacteria 14704
39 Ga0105237_10000056 3300009545 Bacteria 151313
40 Ga0105237_10003560 3300009545 Bacteria 18459
41 Ga0105237_10003801 3300009545 Bacteria 17746
42 Ga0105238_10000247 3300009551 Bacteria 60300
43 Ga0105238_10008955 3300009551 Bacteria 10017
44 Ga0105238_10015075 3300009551 Bacteria 7829
45 Ga0105249_10004875 3300009553 Bacteria 11579
46 Ga0105239_10000032 3300010375 Bacteria 225528
47 Ga0105239_10001141 3300010375 Bacteria 36571
48 Ga0105239_10003640 3300010375 Bacteria 18838
49 Ga0105239_10012015 3300010375 Bacteria 9656
50 Ga0105239_10055342 3300010375 Bacteria 4351
51 Ga0157373_10000001 3300013100 Bacteria 864756
52 Ga0157371_10001737 3300013102 Bacteria 22072
53 Ga0157371_10004273 3300013102 Bacteria 12536
54 Ga0157370_10000073 3300013104 Bacteria 109460
55 Ga0157369_10002107 3300013105 Bacteria 23989
56 Ga0157378_10013157 3300013297 Bacteria 7240
57 Ga0163162_10002474 3300013306 Bacteria 17453
58 Ga0163162_10017223 3300013306 Bacteria 7070
59 Ga0157372_10000016 3300013307 Bacteria 220177
60 Ga0157372_10005581 3300013307 Bacteria 13374
61 Ga0157372_10009568 3300013307 Bacteria 10302
62 Ga0157379_10007004 3300014968 Bacteria 9746
63 Ga0182006_1000292 3300015261 Bacteria 44107
64 Ga0182005_1000071 3300015265 Bacteria 84771
65 Ga0163161_10000155 3300017792 Bacteria 63345
66 Ga0163161_10000546 3300017792 Bacteria 30590
67 Ga0209437_100043 3300025233 Bacteria 440454
68 Ga0209258_100156 3300025242 Bacteria 156926
69 Ga0209646_1000045 3300025246 Bacteria 333765
70 Ga0209148_1000378 3300025254 Bacteria 54132
71 Ga0209129_1007112 3300025258 Bacteria 3416
72 Ga0209673_1000166 3300025273 Bacteria 135260
73 Ga0209676_1000744 3300025292 Bacteria 44158
74 Ga0209564_1001302 3300025295 Bacteria 26894
75 Ga0209564_1005646 3300025295 Bacteria 7031
76 Ga0209758_1000465 3300025297 Bacteria 67058
77 Ga0209758_1000926 3300025297 Bacteria 39667
78 Ga0209050_1002838 3300025298 Bacteria 13750
79 Ga0207426_1000159 3300025302 Bacteria 175899
80 Ga0207426_1000528 3300025302 Bacteria 55297
81 Ga0207426_1003314 3300025302 Bacteria 8927
82 Ga0207680_10000042 3300025903 Bacteria 64406
83 Ga0207654_10000775 3300025911 Bacteria 17563
84 Ga0207654_10010312 3300025911 Bacteria 4756
85 Ga0207695_10009152 3300025913 Bacteria 12291
86 Ga0207671_10000495 3300025914 Bacteria 53496
87 Ga0207671_10002088 3300025914 Bacteria 21861
88 Ga0207671_10006479 3300025914 Bacteria 10419
89 Ga0207671_10010102 3300025914 Bacteria 7825
90 Ga0207694_10003736 3300025924 Bacteria 12063
91 Ga0207694_10017026 3300025924 Bacteria 5490
92 Ga0207667_10004138 3300025949 Bacteria 17827
93 Ga0207667_10020586 3300025949 Bacteria 7330
94 Ga0207677_10005562 3300026023 Bacteria 6844
95 Ga0207703_10033660 3300026035 Bacteria 4064
96 Ga0207639_10006757 3300026041 Bacteria 7806
97 Ga0207641_10000420 3300026088 Bacteria 49549
98 Ga0207641_10013643 3300026088 Bacteria 6665
99 Ga0207676_10004308 3300026095 Bacteria 10062
100 Ga0207674_10005115 3300026116 Bacteria 15654
101 Ga0207698_10004129 3300026142 Bacteria 8823
102 Ga0207698_10007719 3300026142 Bacteria 6750
103 Ga0209489_112936 3300027361 Bacteria 7159
104 Ga0268266_10000049 3300028379 Bacteria 307763
105 Ga0268264_10000041 3300028381 Bacteria 372501
106 Ga0268264_10009274 3300028381 Bacteria 8148
107 Ga0307515_10000072 3300028794 Bacteria 237798
108 Ga0307513_10011657 3300031456 Bacteria 10907
109 Ga0307509_10014065 3300031507 Bacteria 9436
110 Ga0307413_10000133 3300031824 Bacteria 19576
111 Ga0307413_10022676 3300031824 Bacteria 3388
112 Ga0307410_10000223 3300031852 Bacteria 21373
113 Ga0307406_10000361 3300031901 Bacteria 26403
114 Ga0307416_100012188 3300032002 Bacteria 5777
115 Ga0307414_10000079 3300032004 Bacteria 90645
116 Ga0307411_10000011 3300032005 Bacteria 204666
117 Ga0307510_10000555 3300033180 Bacteria 37450
118 Ga0395899_0000011 3300037312 Bacteria 521331
119 Ga0395899_0000283 3300037312 Bacteria 65893
120 Ga0439447_000626 3300041407 Bacteria 13149
121 Ga0439466_0000622 3300041411 Bacteria 13353
122 Ga0466969_0000611 3300044656 Bacteria 19296
123 Ga0466972_0000020 3300044658 Bacteria 197336
124 Ga0466972_0000032 3300044658 Bacteria 159445
125 Ga0466972_0003827 3300044658 Bacteria 7486
126 Ga0453683_0000005 3300044673 Bacteria 741657
127 Ga0466966_0000124 3300044684 Bacteria 48900
128 Ga0453684_0000170 3300044712 Bacteria 289718
129 Ga0453684_0010105 3300044712 Bacteria 16219
130 Ga0453684_0011446 3300044712 Bacteria 14877
131 Ga0453684_0015112 3300044712 Bacteria 12250
132 Ga0453684_0057043 3300044712 Bacteria 5060
133 Ga0466959_0000012 3300045049 Bacteria 168961
134 Ga0466958_0005115 3300045836 Bacteria 7010
135 Ga0495606_0014437 3300046507 Bacteria 6164
136 Ga0495610_0001506 3300046512 Bacteria 20469
137 Ga0495648_0001158 3300046524 Bacteria 26658
138 Ga0495633_0001125 3300046558 Bacteria 21482
139 Ga0495611_0000056 3300046648 Bacteria 80473
140 Ga0495625_0038069 3300046660 Bacteria 3522
141 Ga0495687_000001 3300047443 Bacteria 1215582
142 Ga0495686_0000040 3300047472 Bacteria 301210
143 Ga0496116_0000032 3300048919 Bacteria 419997
144 Ga0496117_0022932 3300048920 Bacteria 4996
145 Ga0496121_0000010 3300048924 Bacteria 793488
146 Ga0496125_0000111 3300048928 Bacteria 191489
147 Ga0496126_0033622 3300048929 Bacteria 4822
148 Ga0501238_000282 3300049671 Bacteria 6696
149 Ga0501249_000005 3300049679 Bacteria 225972
150 Ga0501225_0003601 3300049705 Bacteria 4669
151 Ga0501266_000006 3300049763 Bacteria 312183
152 Ga0501280_000213 3300049776 Bacteria 14518
153 nmdc:mga0k408_12950_c1 3300050493 Bacteria 4567
154 Ga0500578_0000001 3300053086 Bacteria 317120
155 Ga0500578_0029097 3300053086 Bacteria 3548
156 Ga0500583_0000100 3300053092 Bacteria 47289
157 Ga0500641_0000013 3300053096 Bacteria 156919
158 Ga0500641_0000797 3300053096 Bacteria 11398
159 Ga0500658_0000007 3300053134 Bacteria 284115
160 Ga0500577_0001379 3300053142 Bacteria 6205
161 Ga0500588_0000465 3300053146 Bacteria 6411
162 Ga0500622_0000372 3300053156 Bacteria 43235
163 Ga0500622_0005414 3300053156 Bacteria 7675
164 Ga0500622_0006639 3300053156 Bacteria 6668
165 Ga0500611_000010 3300053727 Bacteria 165151

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053096 Ga0500641_0000797 Ga0500641_0000797_8857_11373 821
2 3300003791 Ga0055530_10003556 Ga0055530_100035565 892
3 3300026142 Ga0207698_10007719 Ga0207698_100077193 948
4 3300006237 Ga0097621_100008855 Ga0097621_1000088554 957
5 3300017792 Ga0163161_10000155 Ga0163161_1000015516 965
6 3300010375 Ga0105239_10001141 Ga0105239_100011414 966
7 3300044656 Ga0466969_0000611 Ga0466969_0000611_11483_14431 966
8 3300044684 Ga0466966_0000124 Ga0466966_0000124_25048_27996 966
9 3300045049 Ga0466959_0000012 Ga0466959_0000012_37962_40910 966
10 3300053092 Ga0500583_0000100 Ga0500583_0000100_29612_32560 966
11 3300005455 Ga0070663_100001874 Ga0070663_1000018742 969
12 3300013105 Ga0157369_10002107 Ga0157369_100021079 969
13 3300031852 Ga0307410_10000223 Ga0307410_100002231 970
14 3300031901 Ga0307406_10000361 Ga0307406_100003617 970
15 3300032004 Ga0307414_10000079 Ga0307414_1000007958 970
16 3300049671 Ga0501238_000282 Ga0501238_000282_295_3306 970
17 3300049776 Ga0501280_000213 Ga0501280_000213_2736_5747 970
18 3300031824 Ga0307413_10000133 Ga0307413_100001332 971
19 3300032005 Ga0307411_10000011 Ga0307411_10000011120 971
20 3300041407 Ga0439447_000626 Ga0439447_000626_7592_10603 971
21 3300049763 Ga0501266_000006 Ga0501266_000006_167331_170342 971
22 3300053134 Ga0500658_0000007 Ga0500658_0000007_119461_122472 971
23 3300005367 Ga0070667_100022381 Ga0070667_1000223812 973
24 3300028381 Ga0268264_10009274 Ga0268264_100092745 973
25 3300031456 Ga0307513_10011657 Ga0307513_100116575 975
26 3300053156 Ga0500622_0005414 Ga0500622_0005414_2792_5818 975
27 3300053727 Ga0500611_000010 Ga0500611_000010_18688_21684 975
28 3300005338 Ga0068868_100000765 Ga0068868_1000007654 977
29 3300026023 Ga0207677_10005562 Ga0207677_100055625 977
30 3300028794 Ga0307515_10000072 Ga0307515_10000072204 977
31 3300049705 Ga0501225_0003601 Ga0501225_0003601_26_3055 978
32 3300006358 Ga0068871_100006453 Ga0068871_1000064532 979
33 3300013297 Ga0157378_10013157 Ga0157378_100131572 979
34 3300013306 Ga0163162_10017223 Ga0163162_100172233 979
35 3300044658 Ga0466972_0000032 Ga0466972_0000032_76501_79524 980
36 iso_pu_bacteria 2513020052 2513233702 980
37 iso_pu_bacteria 2519899754 2520882586 980
38 iso_pu_bacteria 2643221600 2644008837 980
39 iso_pu_bacteria 2643221667 2644372688 980
40 iso_pu_bacteria 2643221725 2644683199 980
41 iso_pu_bacteria 2738541279 2738736937 980
42 iso_pu_bacteria 2738541285 2738769485 980
43 iso_pu_bacteria 2738543007 2739218519 980
44 iso_pu_bacteria 2739367857 2740001455 980
45 iso_pu_bacteria 2739367858 2740006271 980
46 iso_pu_bacteria 2802428842 2802652911 980
47 iso_pu_bacteria 2816332280 2817416646 980
48 iso_pu_bacteria 2857613821 2857616874 980
49 iso_pu_bacteria 2857618242 2857620690 980
50 iso_pu_bacteria 2903895155 2903897499 980
51 iso_pu_bacteria 2904419702 2904424064 980
52 iso_pu_bacteria 2919683626 2919687359 980
53 iso_pu_bacteria 2929150217 2929152364 980
54 iso_pu_bacteria 2958458903 2958462425 980
55 iso_pu_bacteria 2977268062 2977270988 980
56 iso_pu_bacteria 8054307821 8054310637 980
57 iso_pu_bacteria 8055592153 8055595594 980
58 iso_pu_bacteria 8056440228 8056441754 980
59 iso_pu_bacteria 2818991444 2819590354 982
60 3300003323 rootH1_10001378 rootH1_1000137815 983
61 3300006942 Ga0099824_1002532 Ga0099824_10025323 984
62 3300013100 Ga0157373_10000001 Ga0157373_10000001690 984
63 3300013102 Ga0157371_10004273 Ga0157371_100042734 984
64 3300013104 Ga0157370_10000073 Ga0157370_1000007342 984
65 3300015261 Ga0182006_1000292 Ga0182006_100029221 984
66 3300027361 Ga0209489_112936 Ga0209489_1129363 984
67 3300032002 Ga0307416_100012188 Ga0307416_1000121883 984
68 3300041411 Ga0439466_0000622 Ga0439466_0000622_8356_11367 984
69 3300048919 Ga0496116_0000032 Ga0496116_0000032_296922_299933 984
70 3300048920 Ga0496117_0022932 Ga0496117_0022932_1466_4477 984
71 3300048928 Ga0496125_0000111 Ga0496125_0000111_146143_149154 984
72 3300048929 Ga0496126_0033622 Ga0496126_0033622_205_3216 984
73 3300049679 Ga0501249_000005 Ga0501249_000005_74015_77026 984
74 3300053096 Ga0500641_0000013 Ga0500641_0000013_95438_98446 984
75 3300053142 Ga0500577_0001379 Ga0500577_0001379_36_3041 984
76 3300003323 rootH1_10031752 rootH1_100317522 985
77 3300005334 Ga0068869_100019470 Ga0068869_1000194701 985
78 3300005563 Ga0068855_100023911 Ga0068855_1000239114 985
79 3300025949 Ga0207667_10020586 Ga0207667_100205862 985
80 3300031824 Ga0307413_10022676 Ga0307413_100226762 986
81 3300053086 Ga0500578_0000001 Ga0500578_0000001_223450_226479 986
82 3300048924 Ga0496121_0000010 Ga0496121_0000010_85767_88799 987
83 iso_pu_bacteria 2738541278 2738728810 988
84 iso_pu_bacteria 2977232053 2977233307 989
85 3300037312 Ga0395899_0000011 Ga0395899_0000011_349086_352124 991
86 3300006237 Ga0097621_100002209 Ga0097621_10000220910 992
87 3300053086 Ga0500578_0029097 Ga0500578_0029097_100_3126 992
88 3300026088 Ga0207641_10013643 Ga0207641_100136432 993
89 3300044658 Ga0466972_0000020 Ga0466972_0000020_40894_43926 993
90 3300006195 Ga0075366_10002426 Ga0075366_100024261 994
91 3300013102 Ga0157371_10001737 Ga0157371_1000173711 994
92 3300013307 Ga0157372_10000016 Ga0157372_10000016146 994
93 3300026116 Ga0207674_10005115 Ga0207674_100051156 994
94 3300037312 Ga0395899_0000283 Ga0395899_0000283_54504_57539 994
95 3300045836 Ga0466958_0005115 Ga0466958_0005115_75_3110 994
96 3300050493 nmdc:mga0k408_12950_c1 nmdc:mga0k408_12950_c1_876_3929 994
97 3300005335 Ga0070666_10000048 Ga0070666_1000004841 995
98 3300005616 Ga0068852_100001214 Ga0068852_10000121415 995
99 3300005617 Ga0068859_100000051 Ga0068859_10000005162 995
100 3300005618 Ga0068864_100003673 Ga0068864_1000036739 995
101 3300006931 Ga0097620_100000051 Ga0097620_10000005162 995
102 3300009101 Ga0105247_10011254 Ga0105247_100112542 995
103 3300009174 Ga0105241_10002190 Ga0105241_100021907 995
104 3300009545 Ga0105237_10003560 Ga0105237_100035605 995
105 3300009553 Ga0105249_10004875 Ga0105249_100048755 995
106 3300010375 Ga0105239_10055342 Ga0105239_100553422 995
107 3300014968 Ga0157379_10007004 Ga0157379_100070042 995
108 3300015265 Ga0182005_1000071 Ga0182005_10000713 995
109 3300025903 Ga0207680_10000042 Ga0207680_1000004220 995
110 3300025911 Ga0207654_10010312 Ga0207654_100103122 995
111 3300025914 Ga0207671_10010102 Ga0207671_100101023 995
112 3300026035 Ga0207703_10033660 Ga0207703_100336602 995
113 3300026088 Ga0207641_10000420 Ga0207641_1000042029 995
114 3300026095 Ga0207676_10004308 Ga0207676_100043083 995
115 3300031507 Ga0307509_10014065 Ga0307509_100140654 995
116 3300005577 Ga0068857_100006166 Ga0068857_1000061665 996
117 3300005616 Ga0068852_100004748 Ga0068852_1000047482 996
118 3300025949 Ga0207667_10004138 Ga0207667_100041387 996
119 3300026142 Ga0207698_10004129 Ga0207698_100041296 996
120 3300013307 Ga0157372_10005581 Ga0157372_100055816 998
121 3300044712 Ga0453684_0057043 Ga0453684_0057043_44_3193 999
122 3300053146 Ga0500588_0000465 Ga0500588_0000465_607_3678 1000
123 3300046660 Ga0495625_0038069 Ga0495625_0038069_159_3230 1007
124 iso_pu_bacteria 2818991442 2819571850 1010
125 iso_pu_bacteria 2821136567 2821141901 1010
126 iso_pu_bacteria 2904467357 2904469685 1010
127 3300044712 Ga0453684_0010105 Ga0453684_0010105_8562_11825 1016
128 3300009551 Ga0105238_10015075 Ga0105238_100150754 1018
129 3300013307 Ga0157372_10009568 Ga0157372_100095683 1018
130 3300033180 Ga0307510_10000555 Ga0307510_1000055521 1021
131 3300044658 Ga0466972_0003827 Ga0466972_0003827_1742_5134 1025
132 3300005548 Ga0070665_100000041 Ga0070665_100000041209 1030
133 3300028379 Ga0268266_10000049 Ga0268266_10000049249 1030
134 3300005539 Ga0068853_100000798 Ga0068853_10000079812 1031
135 3300009093 Ga0105240_10025972 Ga0105240_100259722 1031
136 3300009551 Ga0105238_10008955 Ga0105238_100089557 1031
137 3300010375 Ga0105239_10003640 Ga0105239_1000364010 1031
138 3300025914 Ga0207671_10006479 Ga0207671_100064795 1031
139 3300046524 Ga0495648_0001158 Ga0495648_0001158_4543_7932 1031
140 3300053156 Ga0500622_0006639 Ga0500622_0006639_2201_5590 1031
141 3300009093 Ga0105240_10015668 Ga0105240_100156681 1034
142 3300002737 JGI25162J39368_1000005 JGI25162J39368_1000005208 1035
143 3300013306 Ga0163162_10002474 Ga0163162_100024745 1035
144 3300025233 Ga0209437_100043 Ga0209437_100043192 1035
145 3300025258 Ga0209129_1007112 Ga0209129_10071121 1035
146 3300047443 Ga0495687_000001 Ga0495687_000001_109511_112897 1035
147 3300047472 Ga0495686_0000040 Ga0495686_0000040_113686_116958 1035
148 3300017792 Ga0163161_10000546 Ga0163161_1000054619 1036
149 3300046648 Ga0495611_0000056 Ga0495611_0000056_24626_28018 1036
150 3300009545 Ga0105237_10000056 Ga0105237_1000005610 1038
151 3300010375 Ga0105239_10000032 Ga0105239_1000003258 1038
152 3300025914 Ga0207671_10000495 Ga0207671_1000049510 1038
153 iso_pu_bacteria 2929921140 2929924082 1039
154 3300003320 rootH2_10006838 rootH2_1000683834 1040
155 3300044712 Ga0453684_0011446 Ga0453684_0011446_10585_13917 1040
156 3300044673 Ga0453683_0000005 Ga0453683_0000005_195290_198616 1042
157 3300005843 Ga0068860_100000383 Ga0068860_10000038311 1050
158 3300028381 Ga0268264_10000041 Ga0268264_1000004194 1050
159 3300044712 Ga0453684_0015112 Ga0453684_0015112_8904_12230 1052
160 iso_pu_bacteria 2919437846 2919441849 1059
161 3300044712 Ga0453684_0000170 Ga0453684_0000170_66010_69336 1060
162 3300003771 Ga0055526_1004281 Ga0055526_10042812 1061
163 3300003790 Ga0055528_1002117 Ga0055528_10021175 1061
164 3300005262 Ga0065165_1002746 Ga0065165_10027466 1061
165 3300025273 Ga0209673_1000166 Ga0209673_1000166107 1061
166 3300025295 Ga0209564_1005646 Ga0209564_10056462 1061
167 3300025298 Ga0209050_1002838 Ga0209050_10028386 1061
168 3300025302 Ga0207426_1000528 Ga0207426_10005284 1061
169 3300046512 Ga0495610_0001506 Ga0495610_0001506_9407_12778 1061
170 3300046558 Ga0495633_0001125 Ga0495633_0001125_2006_5377 1061
171 3300025924 Ga0207694_10017026 Ga0207694_100170262 1062
172 3300026041 Ga0207639_10006757 Ga0207639_100067574 1062
173 3300053156 Ga0500622_0000372 Ga0500622_0000372_16472_19813 1064
174 3300046507 Ga0495606_0014437 Ga0495606_0014437_2750_6097 1068
175 iso_pu_bacteria 2522125168 2522553501 1070
176 3300009093 Ga0105240_10000224 Ga0105240_1000022477 1072
177 3300009174 Ga0105241_10000493 Ga0105241_1000049323 1072
178 3300009545 Ga0105237_10003801 Ga0105237_100038015 1072
179 3300009551 Ga0105238_10000247 Ga0105238_1000024740 1072
180 3300010375 Ga0105239_10012015 Ga0105239_100120153 1072
181 3300025911 Ga0207654_10000775 Ga0207654_1000077511 1072
182 3300025913 Ga0207695_10009152 Ga0207695_100091525 1072
183 3300025914 Ga0207671_10002088 Ga0207671_1000208811 1072
184 3300025924 Ga0207694_10003736 Ga0207694_100037365 1072
185 3300002738 JGI25154J39366_1000008 JGI25154J39366_100000872 1073
186 3300025246 Ga0209646_1000045 Ga0209646_100004574 1073
187 3300025297 Ga0209758_1000926 Ga0209758_10009262 1073
188 3300025302 Ga0207426_1000159 Ga0207426_100015910 1073
189 3300001989 JGI24739J22299_10000688 JGI24739J22299_100006885 1074
190 3300003215 JGI25153J46596_10008307 JGI25153J46596_100083072 1074
191 3300005262 Ga0065165_1001254 Ga0065165_100125414 1074
192 3300025242 Ga0209258_100156 Ga0209258_100156135 1074
193 3300025254 Ga0209148_1000378 Ga0209148_100037839 1074
194 3300025292 Ga0209676_1000744 Ga0209676_100074421 1074
195 3300025295 Ga0209564_1001302 Ga0209564_100130220 1074
196 3300025297 Ga0209758_1000465 Ga0209758_100046516 1074
197 3300025302 Ga0207426_1003314 Ga0207426_10033145 1074

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

243

349

0.96

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

154

225

0.93

PF16344

FecR_C

FecR, C-terminal

67

136

0.9

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

155

237

0.85

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

503

1088

0.62

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nsm-assembly1.cif.gz_A crystal structure of the human carboxypeptidase n (kininase i) catalytic domain 0.8787 115 186
6sml-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8537 194 1074
6sm3-assembly1.cif.gz_B structure of the ragab peptide importer in the 'closed-closed' state 0.852 205 1074
6slj-assembly1.cif.gz_A structure of the ragab peptide transporter 0.8506 205 1074
6sli-assembly1.cif.gz_B structure of the ragab peptide transporter 0.8506 205 1074
ID Description Score Start End Superfamily
af_P42787_763_851_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9042 115 186 2.60.40.1120
af_B7Z0Z5_381_464_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8869 115 186 2.60.40.1120
af_P91359_377_465_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8738 115 185 2.60.40.1120
af_F1Q775_193_296_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8504 113 184 2.60.40.1120
af_A0A2R8QHK9_313_419_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8359 115 186 2.60.40.1120
ID Description Score Start End GO Terms
AF-I9DZH0-F1-model_v4 deleted 1.003 112 173
AF-A0A401XKB1-F1-model_v4 TonB-dependent receptor 0.9331 113 186
AF-A0A1M3DUY8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9291 110 185
AF-A0A1B9DXQ0-F1-model_v4 TonB-dependent receptor 0.9169 106 186
AF-A0A3G6MBV4-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9123 111 186

Feature Viewer

pLDDT pTM Quality
77.17 0.74 High
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Predicted Structure (AlphaFold2)

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