F302163

General Info

Members Datasets Scaffolds Average Seq Length
196 123 392 448

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0005333|Ga0501067_0005333_2504_3943
Length 479
Sequence VVGRAHEEGDVIRRAVRFVDERTGSAPLVRKTLRYLFPDHWSFLLGEVALYSFIVLVATGTYLALFYQDSTTQVVYHGPYAPLQGEHMSEAYRSVLNLSTTVKAGLLLRQTHHWAANVFVASIVLHLFRIFFTGAYRKPRELTYWIGLTILVVALLEGYLGYSLVDDLLSGMGLAIGYSVAMSIPFVGANLAELIWDGPFPGQHTFFARMYVAHVFIIPALIGVLLATHLALVALKHHTQFRGPRQTERKIIGVPTFPGQTPRSLGLMLGVAGLLVLLGGLVQINPIWLWGPYHVYASTNGAQPDWYLGWLIGGLRLMPSWDFTIGHYTLVPNPFWGGAAFPLVVFLFLYLWPVLERRGSGDKAFHNLLDRPRDAPVRTAIGVGMVTCVTLVFLAGGSDRVDVLFDLSYASQIWVYRFLVFLGPLAAALITYRVCRELQEGEHVEHARRLAEDAARAASRREDAPTKRRPPDSGLREPV

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
67 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
68 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
69 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
70 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
71 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
75 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
96 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.71
Rhizosphere 87.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0005333 3300049583 Bacteria 7142
2 JGI25406J46586_10013390 3300003203 Bacteria 3525
3 Ga0070658_10043914 3300005327 Bacteria 3611
4 Ga0070683_100000743 3300005329 Bacteria 23855
5 Ga0070683_100004902 3300005329 Bacteria 11093
6 Ga0070683_100175409 3300005329 Bacteria 2035
7 Ga0070680_100003374 3300005336 Bacteria 11913
8 Ga0070680_100004201 3300005336 Bacteria 10798
9 Ga0070680_100069866 3300005336 Bacteria 2884
10 Ga0070682_100001455 3300005337 Bacteria 13289
11 Ga0070660_100037316 3300005339 Bacteria 3684
12 Ga0070661_100051729 3300005344 Bacteria 3007
13 Ga0070661_100090664 3300005344 Bacteria 2264
14 Ga0070661_100125956 3300005344 Bacteria 1922
15 Ga0070659_100074306 3300005366 Bacteria 2707
16 Ga0070659_100188812 3300005366 Bacteria 1693
17 Ga0070709_10029082 3300005434 Bacteria 3301
18 Ga0070714_100238362 3300005435 Bacteria 1678
19 Ga0070713_100108930 3300005436 Bacteria 2412
20 Ga0070678_100036649 3300005456 Bacteria 3435
21 Ga0070678_100164622 3300005456 Bacteria 1800
22 Ga0070662_100019901 3300005457 Bacteria 4566
23 Ga0070681_10024170 3300005458 Bacteria 6117
24 Ga0070681_10076839 3300005458 Bacteria 3297
25 Ga0070699_100171086 3300005518 Bacteria 1925
26 Ga0070679_100003409 3300005530 Bacteria 14558
27 Ga0070679_100017838 3300005530 Bacteria 6874
28 Ga0070679_100032684 3300005530 Bacteria 5149
29 Ga0070684_100002432 3300005535 Bacteria 13716
30 Ga0070684_100011182 3300005535 Bacteria 7145
31 Ga0070684_100029610 3300005535 Bacteria 4642
32 Ga0070684_100101430 3300005535 Bacteria 2572
33 Ga0068855_100043908 3300005563 Bacteria 5292
34 Ga0068855_100153323 3300005563 Bacteria 2619
35 Ga0068857_100006947 3300005577 Bacteria 9739
36 Ga0068856_100025920 3300005614 Bacteria 5717
37 Ga0068856_100036142 3300005614 Bacteria 4843
38 Ga0068856_100129768 3300005614 Bacteria 2525
39 Ga0081539_10004816 3300005985 Bacteria 14485
40 Ga0070716_100007257 3300006173 Bacteria 5449
41 Ga0105240_10072815 3300009093 Bacteria 4245
42 Ga0111539_10000648 3300009094 Bacteria 44951
43 Ga0105245_10000499 3300009098 Bacteria 35958
44 Ga0105245_10009090 3300009098 Bacteria 8659
45 Ga0114129_10783445 3300009147 Bacteria 1218
46 Ga0105241_10151880 3300009174 Bacteria 1895
47 Ga0105242_10053836 3300009176 Bacteria 3287
48 Ga0105239_10077684 3300010375 Bacteria 3653
49 Ga0157371_10176332 3300013102 Bacteria 1528
50 Ga0157369_10016265 3300013105 Bacteria 8374
51 Ga0157369_10035369 3300013105 Bacteria 5478
52 Ga0157369_10262093 3300013105 Bacteria 1802
53 Ga0157374_10010232 3300013296 Bacteria 8067
54 Ga0157374_10355968 3300013296 Bacteria 1455
55 Ga0157378_10198718 3300013297 Bacteria 1895
56 Ga0157372_10139799 3300013307 Bacteria 2789
57 Ga0157375_10209348 3300013308 Bacteria 2107
58 Ga0157376_10325576 3300014969 Bacteria 1462
59 Ga0206353_10692259 3300020082 Bacteria 8788
60 Ga0207699_10057657 3300025906 Bacteria 2320
61 Ga0207705_10049637 3300025909 Bacteria 3020
62 Ga0207693_10040638 3300025915 Bacteria 3663
63 Ga0207660_10007336 3300025917 Bacteria 7134
64 Ga0207662_10105794 3300025918 Bacteria 1749
65 Ga0207657_10001572 3300025919 Bacteria 24505
66 Ga0207649_10015045 3300025920 Bacteria 4345
67 Ga0207649_10032142 3300025920 Bacteria 3126
68 Ga0207652_10018452 3300025921 Bacteria 5723
69 Ga0207687_10014920 3300025927 Bacteria 5089
70 Ga0207700_10000021 3300025928 Bacteria 168335
71 Ga0207664_10029914 3300025929 Bacteria 4154
72 Ga0207706_10033660 3300025933 Bacteria 4560
73 Ga0207686_10034768 3300025934 Bacteria 3019
74 Ga0207665_10001898 3300025939 Bacteria 14080
75 Ga0207665_10007983 3300025939 Bacteria 6985
76 Ga0207661_10001157 3300025944 Bacteria 17612
77 Ga0207661_10096152 3300025944 Bacteria 2478
78 Ga0207702_10128792 3300026078 Bacteria 2275
79 Ga0207674_10004988 3300026116 Bacteria 15868
80 Ga0207683_10000623 3300026121 Bacteria 32551
81 Ga0207683_10009165 3300026121 Bacteria 8431
82 Ga0207428_10008405 3300027907 Bacteria 9323
83 Ga0307415_100000657 3300032126 Bacteria 15229
84 Ga0373941_0007220 3300035115 Bacteria 2712
85 Ga0373925_0076939 3300037068 Bacteria 2532
86 Ga0395899_0003825 3300037312 Bacteria 11881
87 Ga0395900_0005371 3300037418 Bacteria 13426
88 Ga0395900_0009547 3300037418 Bacteria 9948
89 Ga0395900_0035742 3300037418 Bacteria 5119
90 Ga0395900_0092337 3300037418 Bacteria 3110
91 Ga0395900_0134585 3300037418 Bacteria 2532
92 Ga0395898_0019182 3300037466 Bacteria 6962
93 Ga0395898_0026327 3300037466 Bacteria 5854
94 Ga0395898_0138288 3300037466 Bacteria 2332
95 Ga0395905_0151559 3300037471 Bacteria 2181
96 Ga0395901_0000717 3300038443 Bacteria 37735
97 Ga0395901_0043647 3300038443 Bacteria 4650
98 Ga0395901_0068230 3300038443 Bacteria 3705
99 Ga0395901_0144375 3300038443 Bacteria 2502
100 Ga0451798_0577630 3300041458 Bacteria 1223
101 Ga0451835_0015300 3300041492 Bacteria 3337
102 Ga0451839_1263468 3300041496 Bacteria 7564
103 Ga0451849_1197729 3300041505 Bacteria 4304
104 Ga0451855_0619683 3300041511 Bacteria 2488
105 Ga0466965_0062538 3300044683 Bacteria 1862
106 Ga0466966_0031993 3300044684 Bacteria 3411
107 Ga0466961_0040689 3300044693 Bacteria 2979
108 Ga0466961_0055001 3300044693 Bacteria 2538
109 Ga0466963_0010001 3300044694 Bacteria 5733
110 Ga0466963_0014352 3300044694 Bacteria 4884
111 Ga0466963_0045145 3300044694 Bacteria 2902
112 Ga0466963_0056149 3300044694 Bacteria 2619
113 Ga0466963_0064526 3300044694 Bacteria 2454
114 Ga0466964_0007180 3300044706 Bacteria 4166
115 Ga0466964_0010384 3300044706 Bacteria 3513
116 Ga0466971_0000862 3300044719 Bacteria 12396
117 Ga0466971_0062689 3300044719 Bacteria 1682
118 Ga0466968_0028596 3300044735 Bacteria 2299
119 Ga0466957_0004338 3300044842 Bacteria 7879
120 Ga0466960_0027547 3300044901 Bacteria 2593
121 Ga0466959_0003255 3300045049 Bacteria 10577
122 Ga0466959_0022766 3300045049 Bacteria 4632
123 Ga0466958_0000897 3300045836 Bacteria 13365
124 Ga0466967_0000494 3300045976 Bacteria 19233
125 Ga0466967_0001892 3300045976 Bacteria 12648
126 Ga0466967_0002615 3300045976 Bacteria 11329
127 Ga0466967_0012417 3300045976 Bacteria 6513
128 Ga0466967_0013557 3300045976 Bacteria 6305
129 Ga0466967_0018415 3300045976 Bacteria 5579
130 Ga0466967_0034310 3300045976 Bacteria 4305
131 Ga0466967_0034437 3300045976 Bacteria 4299
132 Ga0466967_0035316 3300045976 Bacteria 4253
133 Ga0466967_0047668 3300045976 Bacteria 3736
134 Ga0466967_0068293 3300045976 Bacteria 3173
135 Ga0466967_0088069 3300045976 Bacteria 2816
136 Ga0495603_0014261 3300046455 Bacteria 4808
137 Ga0495594_0003045 3300046499 Bacteria 8682
138 Ga0495666_0011446 3300046526 Bacteria 4422
139 Ga0495652_0099472 3300046529 Bacteria 2362
140 Ga0496100_0005140 3300048903 Bacteria 7016
141 Ga0496101_0012001 3300048904 Bacteria 5774
142 Ga0496102_0003192 3300048905 Bacteria 13906
143 Ga0496103_0008470 3300048906 Bacteria 6109
144 Ga0496104_0002345 3300048907 Bacteria 16363
145 Ga0496104_0002484 3300048907 Bacteria 15887
146 Ga0496104_0015085 3300048907 Bacteria 6993
147 Ga0496105_0003738 3300048908 Bacteria 11335
148 Ga0496108_0032271 3300048911 Bacteria 4350
149 Ga0496108_0033462 3300048911 Bacteria 4271
150 Ga0496109_0011585 3300048912 Bacteria 7588
151 Ga0496109_0025663 3300048912 Bacteria 5252
152 Ga0496110_0006698 3300048913 Bacteria 9158
153 Ga0496110_0036744 3300048913 Bacteria 4255
154 Ga0496111_0002763 3300048914 Bacteria 10674
155 Ga0496111_0029226 3300048914 Bacteria 3913
156 Ga0496112_0016634 3300048915 Bacteria 6896
157 Ga0496112_0026410 3300048915 Bacteria 5587
158 Ga0496112_0144558 3300048915 Bacteria 2347
159 Ga0496114_0000738 3300048917 Bacteria 24412
160 Ga0501031_0008010 3300049568 Bacteria 6879
161 Ga0501032_0004941 3300049569 Bacteria 9970
162 Ga0501033_0005047 3300049570 Bacteria 10513
163 Ga0501034_0009985 3300049571 Bacteria 9922
164 Ga0501036_0003782 3300049572 Bacteria 12132
165 Ga0501037_0037793 3300049573 Bacteria 3560
166 Ga0501040_0034755 3300049576 Bacteria 3415
167 Ga0501043_0011504 3300049579 Bacteria 6926
168 Ga0501046_0025692 3300049580 Bacteria 4817
169 Ga0501046_0080028 3300049580 Bacteria 2526
170 Ga0501046_0100638 3300049580 Bacteria 2218
171 Ga0501047_0005931 3300049581 Bacteria 11491
172 Ga0501047_0010692 3300049581 Bacteria 8672
173 Ga0501047_0130852 3300049581 Bacteria 2390
174 Ga0501047_0263364 3300049581 Bacteria 1571
175 Ga0501067_0006565 3300049583 Bacteria 6447
176 Ga0501067_0026750 3300049583 Bacteria 3194
177 Ga0501067_0028139 3300049583 Bacteria 3114
178 Ga0501068_0047474 3300049584 Bacteria 2590
179 Ga0501068_0079852 3300049584 Bacteria 2006
180 Ga0501069_0004747 3300049585 Bacteria 7030
181 Ga0501069_0008357 3300049585 Bacteria 5437
182 Ga0501070_0000104 3300049586 Bacteria 74572
183 Ga0501070_0002273 3300049586 Bacteria 16892
184 Ga0501070_0035036 3300049586 Bacteria 4195
185 Ga0501073_0002560 3300049589 Bacteria 13587
186 Ga0501074_0073085 3300049590 Bacteria 2463
187 Ga0501080_0023173 3300049742 Bacteria 5757
188 Ga0501083_0017404 3300049744 Bacteria 5010
189 Ga0501035_0005413 3300049822 Bacteria 12068
190 Ga0501044_0006374 3300049823 Bacteria 13045
191 nmdc:mga08y16_14176_c1 3300050511 Bacteria 8389
192 nmdc:mga0n895_2475_c1 3300050512 Bacteria 14439
193 Ga0495601_0083242 3300053077 Bacteria 2055
194 Ga0501082_0037320 3300060353 Bacteria 4188
195 Ga0466962_0000388 3300061719 Bacteria 18980
196 Ga0530510_0148025 3300061734 Bacteria 1733
197 Ga0501067_0005333
198 JGI25406J46586_10013390
199 Ga0070658_10043914
200 Ga0070683_100000743
201 Ga0070683_100004902
202 Ga0070683_100175409
203 Ga0070680_100003374
204 Ga0070680_100004201
205 Ga0070680_100069866
206 Ga0070682_100001455
207 Ga0070660_100037316
208 Ga0070661_100051729
209 Ga0070661_100090664
210 Ga0070661_100125956
211 Ga0070659_100074306
212 Ga0070659_100188812
213 Ga0070709_10029082
214 Ga0070714_100238362
215 Ga0070713_100108930
216 Ga0070678_100036649
217 Ga0070678_100164622
218 Ga0070662_100019901
219 Ga0070681_10024170
220 Ga0070681_10076839
221 Ga0070699_100171086
222 Ga0070679_100003409
223 Ga0070679_100017838
224 Ga0070679_100032684
225 Ga0070684_100002432
226 Ga0070684_100011182
227 Ga0070684_100029610
228 Ga0070684_100101430
229 Ga0068855_100043908
230 Ga0068855_100153323
231 Ga0068857_100006947
232 Ga0068856_100025920
233 Ga0068856_100036142
234 Ga0068856_100129768
235 Ga0081539_10004816
236 Ga0070716_100007257
237 Ga0105240_10072815
238 Ga0111539_10000648
239 Ga0105245_10000499
240 Ga0105245_10009090
241 Ga0114129_10783445
242 Ga0105241_10151880
243 Ga0105242_10053836
244 Ga0105239_10077684
245 Ga0157371_10176332
246 Ga0157369_10016265
247 Ga0157369_10035369
248 Ga0157369_10262093
249 Ga0157374_10010232
250 Ga0157374_10355968
251 Ga0157378_10198718
252 Ga0157372_10139799
253 Ga0157375_10209348
254 Ga0157376_10325576
255 Ga0206353_10692259
256 Ga0207699_10057657
257 Ga0207705_10049637
258 Ga0207693_10040638
259 Ga0207660_10007336
260 Ga0207662_10105794
261 Ga0207657_10001572
262 Ga0207649_10015045
263 Ga0207649_10032142
264 Ga0207652_10018452
265 Ga0207687_10014920
266 Ga0207700_10000021
267 Ga0207664_10029914
268 Ga0207706_10033660
269 Ga0207686_10034768
270 Ga0207665_10001898
271 Ga0207665_10007983
272 Ga0207661_10001157
273 Ga0207661_10096152
274 Ga0207702_10128792
275 Ga0207674_10004988
276 Ga0207683_10000623
277 Ga0207683_10009165
278 Ga0207428_10008405
279 Ga0307415_100000657
280 Ga0373941_0007220
281 Ga0373925_0076939
282 Ga0395899_0003825
283 Ga0395900_0005371
284 Ga0395900_0009547
285 Ga0395900_0035742
286 Ga0395900_0092337
287 Ga0395900_0134585
288 Ga0395898_0019182
289 Ga0395898_0026327
290 Ga0395898_0138288
291 Ga0395905_0151559
292 Ga0395901_0000717
293 Ga0395901_0043647
294 Ga0395901_0068230
295 Ga0395901_0144375
296 Ga0451798_0577630
297 Ga0451835_0015300
298 Ga0451839_1263468
299 Ga0451849_1197729
300 Ga0451855_0619683
301 Ga0466965_0062538
302 Ga0466966_0031993
303 Ga0466961_0040689
304 Ga0466961_0055001
305 Ga0466963_0010001
306 Ga0466963_0014352
307 Ga0466963_0045145
308 Ga0466963_0056149
309 Ga0466963_0064526
310 Ga0466964_0007180
311 Ga0466964_0010384
312 Ga0466971_0000862
313 Ga0466971_0062689
314 Ga0466968_0028596
315 Ga0466957_0004338
316 Ga0466960_0027547
317 Ga0466959_0003255
318 Ga0466959_0022766
319 Ga0466958_0000897
320 Ga0466967_0000494
321 Ga0466967_0001892
322 Ga0466967_0002615
323 Ga0466967_0012417
324 Ga0466967_0013557
325 Ga0466967_0018415
326 Ga0466967_0034310
327 Ga0466967_0034437
328 Ga0466967_0035316
329 Ga0466967_0047668
330 Ga0466967_0068293
331 Ga0466967_0088069
332 Ga0495603_0014261
333 Ga0495594_0003045
334 Ga0495666_0011446
335 Ga0495652_0099472
336 Ga0496100_0005140
337 Ga0496101_0012001
338 Ga0496102_0003192
339 Ga0496103_0008470
340 Ga0496104_0002345
341 Ga0496104_0002484
342 Ga0496104_0015085
343 Ga0496105_0003738
344 Ga0496108_0032271
345 Ga0496108_0033462
346 Ga0496109_0011585
347 Ga0496109_0025663
348 Ga0496110_0006698
349 Ga0496110_0036744
350 Ga0496111_0002763
351 Ga0496111_0029226
352 Ga0496112_0016634
353 Ga0496112_0026410
354 Ga0496112_0144558
355 Ga0496114_0000738
356 Ga0501031_0008010
357 Ga0501032_0004941
358 Ga0501033_0005047
359 Ga0501034_0009985
360 Ga0501036_0003782
361 Ga0501037_0037793
362 Ga0501040_0034755
363 Ga0501043_0011504
364 Ga0501046_0025692
365 Ga0501046_0080028
366 Ga0501046_0100638
367 Ga0501047_0005931
368 Ga0501047_0010692
369 Ga0501047_0130852
370 Ga0501047_0263364
371 Ga0501067_0006565
372 Ga0501067_0026750
373 Ga0501067_0028139
374 Ga0501068_0047474
375 Ga0501068_0079852
376 Ga0501069_0004747
377 Ga0501069_0008357
378 Ga0501070_0000104
379 Ga0501070_0002273
380 Ga0501070_0035036
381 Ga0501073_0002560
382 Ga0501074_0073085
383 Ga0501080_0023173
384 Ga0501083_0017404
385 Ga0501035_0005413
386 Ga0501044_0006374
387 nmdc:mga08y16_14176_c1
388 nmdc:mga0n895_2475_c1
389 Ga0495601_0083242
390 Ga0501082_0037320
391 Ga0466962_0000388
392 Ga0530510_0148025

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13631

Cytochrom_B_N_2

Cytochrome b(N-terminal)/b6/petB

117

292

0.93

PF00033

Cytochrome_B

Cytochrome b/b6/petB

36

238

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qho-assembly1.cif.gz_B cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (as isolated) 0.8462 11 438
2d2c-assembly1.cif.gz_A crystal structure of cytochrome b6f complex with dbmib from m. laminosus 0.846 39 226
6hwh-assembly1.cif.gz_b structure of a functional obligate respiratory supercomplex from mycobacterium smegmatis 0.8401 11 437
7e1v-assembly1.cif.gz_N cryo-em structure of apo hybrid respiratory supercomplex consisting of mycobacterium tuberculosis complexiii and mycobacterium smegmatis complexiv 0.8399 9 438
7qho-assembly1.cif.gz_B cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (as isolated) 0.7867 11 438
ID Description Score Start End Superfamily
2d2cA00 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.846 39 226 1.20.810.10
af_P9WP37_12_439_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8415 9 434 1.20.810.10
af_P9WP37_12_439_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8285 9 434 1.20.810.10
af_P03879_1_263_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.7894 35 277 1.20.810.10
1vf5A00 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.7842 10 226 1.20.810.10
ID Description Score Start End GO Terms
AF-W4TU27-F1-model_v4 deleted 0.9371 45 151
AF-A0A420F8Q9-F1-model_v4 DUF3592 domain-containing protein 0.9295 305 436 GO:0016020
AF-A0A538K198-F1-model_v4 Cytochrome b 0.9188 314 447 GO:0016020
AF-A0A6J4K4B4-F1-model_v4 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) 0.9133 308 437 GO:0016020
GO:0016491
AF-A0A538K198-F1-model_v4 Cytochrome b 0.906 314 447 GO:0016020

Map