F302145

General Info

Members Datasets Scaffolds Average Seq Length
196 115 392 509

Family's Representative Sequence

Representative Sequence 3300049573|Ga0501037_0006078|Ga0501037_0006078_3151_4884
Length 577
Sequence LNGFNRMPSDPASRREMVFNAPVQASPPRVPAVGSGNGSPPRQVGTPPTAPSVQSPQPATQADEIEVLIRARYPIIYVVSWEEERVERRLAEIASNRNKKLYLWTYTQGIVRHGSEVQPSRGSAGSTTDPLAALDAVLSHVEPAIYLFKDFHPFTEENRANLAVIRRLKDVAYQLRDTYKTLVIVAPMMRIAAELDKDITVVELKPPEPKDLNRLLDRIIHDLKDSPQVKINLDADSRERLVQAARGLTLKEAENVFAKTIVLDGKIDADDVSVVFSEKQQIIKKSGLLEYYASQEQFDHVAGLDNLKEWLTKRTMAFSERAAQFGLPPPRGVLLLGVQGCGKSLCAKAVSSLWKLPLLRFDVGRMFGSLVGSSEENIRRAIHTAESVAPAILWVDEIDKAFAGAAHSGGSDGGTAARVFGTFLTWLSDKTSPVFVIATANDITQLPPELLRKGRLDEIFFVDLPNETERTQIFNIHLRKRHRDAGGFDLQTLARCSDGFSGAEIEQAIISGLFDAFSNSRQLDTAILANSLAETVPLSKTMSEELGRLRSWAQGRARSATGASAGVAVESRRKIEL

Samples

Sample ID Description Type Environment
1 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
50 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
67 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
70 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
88 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
115 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0
Isolates 1.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.92
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501037_0006078 3300049573 Bacteria 8821
2 rootH2_10089512 3300003320 Bacteria 8843
3 Ga0070690_100070899 3300005330 Unclassified 2264
4 Ga0070680_100036552 3300005336 Bacteria 3967
5 Ga0070689_100043979 3300005340 Bacteria 3435
6 Ga0070714_100012347 3300005435 Bacteria 6819
7 Ga0070705_100040950 3300005440 Unclassified 2638
8 Ga0070694_100015350 3300005444 Unclassified 4809
9 Ga0070681_10031010 3300005458 Bacteria 5367
10 Ga0070681_10048176 3300005458 Bacteria 4259
11 Ga0070681_10051003 3300005458 Bacteria 4127
12 Ga0070685_10043301 3300005466 Bacteria 2573
13 Ga0070679_100008401 3300005530 Bacteria 9718
14 Ga0070697_100083989 3300005536 Bacteria 2626
15 Ga0070686_100003765 3300005544 Bacteria 8337
16 Ga0070686_100004537 3300005544 Bacteria 7657
17 Ga0070695_100075079 3300005545 Bacteria 2223
18 Ga0070704_100000613 3300005549 Bacteria 17180
19 Ga0070704_100004750 3300005549 Bacteria 7863
20 Ga0070704_100059281 3300005549 Bacteria 2730
21 Ga0068855_100096551 3300005563 Bacteria 3404
22 Ga0068857_100119014 3300005577 Unclassified 2377
23 Ga0068856_100054210 3300005614 Bacteria 3954
24 Ga0068856_100106829 3300005614 Bacteria 2794
25 Ga0068856_100242085 3300005614 Unclassified 1819
26 Ga0068859_100015153 3300005617 Bacteria 7738
27 Ga0068859_100063230 3300005617 Bacteria 3732
28 Ga0068859_100151890 3300005617 Unclassified 2391
29 Ga0068863_100007378 3300005841 Bacteria 10762
30 Ga0068863_100010044 3300005841 Bacteria 9214
31 Ga0068858_100063174 3300005842 Bacteria 3426
32 Ga0097621_100018923 3300006237 Bacteria 5275
33 Ga0068871_100041496 3300006358 Bacteria 3690
34 Ga0075431_100138941 3300006847 Bacteria 2505
35 Ga0075431_100139257 3300006847 Bacteria 2502
36 Ga0075429_100000762 3300006880 Bacteria 25370
37 Ga0075429_100057207 3300006880 Bacteria 3395
38 Ga0097620_100015153 3300006931 Bacteria 7738
39 Ga0097620_100063229 3300006931 Bacteria 3732
40 Ga0097620_100151888 3300006931 Unclassified 2391
41 Ga0075435_100074516 3300007076 Bacteria 2777
42 Ga0105240_10003552 3300009093 Bacteria 24193
43 Ga0105240_10028396 3300009093 Bacteria 7309
44 Ga0105240_10082887 3300009093 Bacteria 3938
45 Ga0111539_10020547 3300009094 Bacteria 8133
46 Ga0111539_10296717 3300009094 Unclassified 1881
47 Ga0105245_10043974 3300009098 Bacteria 3986
48 Ga0114129_10020604 3300009147 Bacteria 9376
49 Ga0105249_10083504 3300009553 Bacteria 2973
50 Ga0105249_10162360 3300009553 Bacteria 2160
51 Ga0157374_10239049 3300013296 Bacteria 1786
52 Ga0157375_10000376 3300013308 Bacteria 40655
53 Ga0157375_10281606 3300013308 Bacteria 1826
54 Ga0163163_10000096 3300014325 Bacteria 93313
55 Ga0213875_10000014 3300021388 Bacteria 290943
56 Ga0207707_10029482 3300025912 Bacteria 4798
57 Ga0207707_10056230 3300025912 Bacteria 3423
58 Ga0207707_10065535 3300025912 Bacteria 3164
59 Ga0207695_10009913 3300025913 Bacteria 11705
60 Ga0207695_10076313 3300025913 Bacteria 3407
61 Ga0207660_10017063 3300025917 Bacteria 4817
62 Ga0207652_10121375 3300025921 Bacteria 2325
63 Ga0207664_10100090 3300025929 Bacteria 2393
64 Ga0207670_10045347 3300025936 Bacteria 2914
65 Ga0207712_10099453 3300025961 Bacteria 2160
66 Ga0207703_10040370 3300026035 Bacteria 3734
67 Ga0207703_10148649 3300026035 Bacteria 2041
68 Ga0207702_10055914 3300026078 Bacteria 3348
69 Ga0207702_10069393 3300026078 Unclassified 3030
70 Ga0207702_10197245 3300026078 Unclassified 1864
71 Ga0207641_10009532 3300026088 Bacteria 8001
72 Ga0207674_10076857 3300026116 Unclassified 3346
73 Ga0207674_10136554 3300026116 Bacteria 2414
74 Ga0207428_10027067 3300027907 Bacteria 4775
75 Ga0207428_10072530 3300027907 Bacteria 2702
76 Ga0265337_1002437 3300028556 Bacteria 8543
77 Ga0265337_1011409 3300028556 Bacteria 3063
78 Ga0265326_10008873 3300028558 Bacteria 3014
79 Ga0265319_1013277 3300028563 Unclassified 3286
80 Ga0265319_1018307 3300028563 Unclassified 2640
81 Ga0265334_10008372 3300028573 Bacteria 4399
82 Ga0265323_10000340 3300028653 Bacteria 26698
83 Ga0265322_10005888 3300028654 Unclassified 3614
84 Ga0265336_10004207 3300028666 Bacteria 5474
85 Ga0265336_10012333 3300028666 Bacteria 2878
86 Ga0265338_10000208 3300028800 Bacteria 109817
87 Ga0265338_10002629 3300028800 Bacteria 26496
88 Ga0265338_10005169 3300028800 Bacteria 17145
89 Ga0265338_10011590 3300028800 Bacteria 10164
90 Ga0265338_10012183 3300028800 Bacteria 9822
91 Ga0265338_10016394 3300028800 Bacteria 8067
92 Ga0265338_10016752 3300028800 Bacteria 7942
93 Ga0265338_10017811 3300028800 Bacteria 7639
94 Ga0265338_10018240 3300028800 Bacteria 7521
95 Ga0265338_10022950 3300028800 Bacteria 6436
96 Ga0265338_10023480 3300028800 Bacteria 6338
97 Ga0265338_10030145 3300028800 Bacteria 5355
98 Ga0265338_10034147 3300028800 Unclassified 4921
99 Ga0265338_10035151 3300028800 Bacteria 4824
100 Ga0265338_10042775 3300028800 Bacteria 4212
101 Ga0265338_10043600 3300028800 Unclassified 4158
102 Ga0265338_10095265 3300028800 Unclassified 2446
103 Ga0265324_10000455 3300029957 Bacteria 28816
104 Ga0265324_10000475 3300029957 Bacteria 28206
105 Ga0265324_10003502 3300029957 Bacteria 7423
106 Ga0265320_10000378 3300031240 Bacteria 36023
107 Ga0265320_10004111 3300031240 Bacteria 9562
108 Ga0265320_10022928 3300031240 Unclassified 3333
109 Ga0265340_10054772 3300031247 Bacteria 1923
110 Ga0265327_10042671 3300031251 Bacteria 2433
111 Ga0265316_10035944 3300031344 Unclassified 4009
112 Ga0265316_10087580 3300031344 Unclassified 2379
113 Ga0307408_100005958 3300031548 Bacteria 8118
114 Ga0316575_10019559 3300031665 Bacteria 2591
115 Ga0316576_10003658 3300031727 Bacteria 9063
116 Ga0316576_10020171 3300031727 Bacteria 4580
117 Ga0316576_10026928 3300031727 Bacteria 4038
118 Ga0316576_10105242 3300031727 Bacteria 2112
119 Ga0316578_10002179 3300031728 Bacteria 8457
120 Ga0316578_10004040 3300031728 Bacteria 6855
121 Ga0307516_10004112 3300031730 Bacteria 18151
122 Ga0316577_10008203 3300031733 Bacteria 5591
123 Ga0307406_10000088 3300031901 Bacteria 52833
124 Ga0316585_10002891 3300032137 Bacteria 4685
125 Ga0316580_10001504 3300032139 Bacteria 6109
126 Ga0373954_0015347 3300035118 Unclassified 3424
127 Ga0316574_0000872 3300035398 Bacteria 13314
128 Ga0316574_0002487 3300035398 Bacteria 9257
129 Ga0373935_0026780 3300035692 Bacteria 3563
130 Ga0373927_0002826 3300035695 Bacteria 12663
131 Ga0373933_0021200 3300035724 Unclassified 3689
132 Ga0373947_0002100 3300035725 Bacteria 12145
133 Ga0316582_0130843 3300036647 Bacteria 1685
134 Ga0316584_0066222 3300036712 Bacteria 2707
135 Ga0316584_0070152 3300036712 Bacteria 2627
136 Ga0373925_0002786 3300037068 Bacteria 13810
137 Ga0436364_1220798 3300037853 Bacteria 180734
138 Ga0400483_026308 3300039062 Bacteria 223136
139 Ga0400483_195378 3300039062 Bacteria 81541
140 Ga0400483_250036 3300039062 Bacteria 396353
141 Ga0451577_0001991 3300042876 Bacteria 25527
142 Ga0451577_0002947 3300042876 Bacteria 19496
143 Ga0451577_0099867 3300042876 Bacteria 2592
144 Ga0451577_0178998 3300042876 Bacteria 1911
145 Ga0466969_0000903 3300044656 Bacteria 16044
146 Ga0466966_0004702 3300044684 Bacteria 8985
147 Ga0453684_0000188 3300044712 Bacteria 270311
148 Ga0453684_0000707 3300044712 Bacteria 118400
149 Ga0453684_0007853 3300044712 Bacteria 19420
150 Ga0453684_0029632 3300044712 Bacteria 7761
151 Ga0451576_0022136 3300045051 Bacteria 6896
152 Ga0451576_0023254 3300045051 Bacteria 6713
153 Ga0451576_0064971 3300045051 Bacteria 3800
154 Ga0451576_0186161 3300045051 Unclassified 2168
155 Ga0451576_0226924 3300045051 Bacteria 1950
156 Ga0495651_0092394 3300046462 Bacteria 2267
157 Ga0495582_0009809 3300046473 Bacteria 5275
158 Ga0495618_0000552 3300046514 Bacteria 26567
159 Ga0495630_0003088 3300046517 Bacteria 11555
160 Ga0495630_0025700 3300046517 Bacteria 4355
161 Ga0495630_0064373 3300046517 Unclassified 2755
162 Ga0495666_0003511 3300046526 Bacteria 7911
163 Ga0495640_0069840 3300046533 Unclassified 2362
164 Ga0495586_0001822 3300046535 Bacteria 11633
165 Ga0495621_0010444 3300046539 Bacteria 2841
166 Ga0495667_0080936 3300046559 Unclassified 2111
167 Ga0495634_0000669 3300046642 Bacteria 33295
168 Ga0495647_0042609 3300046681 Unclassified 1734
169 Ga0495613_0022908 3300046689 Unclassified 4654
170 Ga0495674_0004712 3300047319 Bacteria 13121
171 Ga0495674_0023355 3300047319 Bacteria 5700
172 Ga0495676_0018185 3300047321 Bacteria 6201
173 Ga0495602_0074376 3300048088 Bacteria 2888
174 Ga0501032_0025659 3300049569 Bacteria 4062
175 Ga0501034_0000105 3300049571 Bacteria 154973
176 Ga0501034_0040651 3300049571 Bacteria 4707
177 Ga0501034_0085302 3300049571 Bacteria 3160
178 Ga0501034_0139468 3300049571 Bacteria 2405
179 Ga0501043_0095377 3300049579 Bacteria 2338
180 Ga0501043_0149623 3300049579 Bacteria 1827
181 Ga0501047_0054211 3300049581 Bacteria 3878
182 Ga0501047_0186883 3300049581 Bacteria 1937
183 Ga0501073_0001101 3300049589 Bacteria 19584
184 Ga0501080_0021506 3300049742 Bacteria 5970
185 Ga0501035_0006916 3300049822 Bacteria 10594
186 Ga0501035_0007923 3300049822 Bacteria 9919
187 Ga0501044_0000506 3300049823 Bacteria 47466
188 Ga0501044_0001250 3300049823 Bacteria 30155
189 Ga0501044_0028272 3300049823 Bacteria 5918
190 nmdc:mga05p37_931_c1 3300050507 Bacteria 32975
191 nmdc:mga09592_54248_c1 3300050508 Bacteria 3386
192 nmdc:mga09592_75_c1 3300050508 Bacteria 56459
193 nmdc:mga06r32_15504_c1 3300050510 Bacteria 6920
194 nmdc:mga08y16_12545_c1 3300050511 Archaea 8917
195 2687234131 2684623219 Bacteria 8442773
196 2889056082 2889049205 Bacteria 7524325
197 Ga0501037_0006078
198 rootH2_10089512
199 Ga0070690_100070899
200 Ga0070680_100036552
201 Ga0070689_100043979
202 Ga0070714_100012347
203 Ga0070705_100040950
204 Ga0070694_100015350
205 Ga0070681_10031010
206 Ga0070681_10048176
207 Ga0070681_10051003
208 Ga0070685_10043301
209 Ga0070679_100008401
210 Ga0070697_100083989
211 Ga0070686_100003765
212 Ga0070686_100004537
213 Ga0070695_100075079
214 Ga0070704_100000613
215 Ga0070704_100004750
216 Ga0070704_100059281
217 Ga0068855_100096551
218 Ga0068857_100119014
219 Ga0068856_100054210
220 Ga0068856_100106829
221 Ga0068856_100242085
222 Ga0068859_100015153
223 Ga0068859_100063230
224 Ga0068859_100151890
225 Ga0068863_100007378
226 Ga0068863_100010044
227 Ga0068858_100063174
228 Ga0097621_100018923
229 Ga0068871_100041496
230 Ga0075431_100138941
231 Ga0075431_100139257
232 Ga0075429_100000762
233 Ga0075429_100057207
234 Ga0097620_100015153
235 Ga0097620_100063229
236 Ga0097620_100151888
237 Ga0075435_100074516
238 Ga0105240_10003552
239 Ga0105240_10028396
240 Ga0105240_10082887
241 Ga0111539_10020547
242 Ga0111539_10296717
243 Ga0105245_10043974
244 Ga0114129_10020604
245 Ga0105249_10083504
246 Ga0105249_10162360
247 Ga0157374_10239049
248 Ga0157375_10000376
249 Ga0157375_10281606
250 Ga0163163_10000096
251 Ga0213875_10000014
252 Ga0207707_10029482
253 Ga0207707_10056230
254 Ga0207707_10065535
255 Ga0207695_10009913
256 Ga0207695_10076313
257 Ga0207660_10017063
258 Ga0207652_10121375
259 Ga0207664_10100090
260 Ga0207670_10045347
261 Ga0207712_10099453
262 Ga0207703_10040370
263 Ga0207703_10148649
264 Ga0207702_10055914
265 Ga0207702_10069393
266 Ga0207702_10197245
267 Ga0207641_10009532
268 Ga0207674_10076857
269 Ga0207674_10136554
270 Ga0207428_10027067
271 Ga0207428_10072530
272 Ga0265337_1002437
273 Ga0265337_1011409
274 Ga0265326_10008873
275 Ga0265319_1013277
276 Ga0265319_1018307
277 Ga0265334_10008372
278 Ga0265323_10000340
279 Ga0265322_10005888
280 Ga0265336_10004207
281 Ga0265336_10012333
282 Ga0265338_10000208
283 Ga0265338_10002629
284 Ga0265338_10005169
285 Ga0265338_10011590
286 Ga0265338_10012183
287 Ga0265338_10016394
288 Ga0265338_10016752
289 Ga0265338_10017811
290 Ga0265338_10018240
291 Ga0265338_10022950
292 Ga0265338_10023480
293 Ga0265338_10030145
294 Ga0265338_10034147
295 Ga0265338_10035151
296 Ga0265338_10042775
297 Ga0265338_10043600
298 Ga0265338_10095265
299 Ga0265324_10000455
300 Ga0265324_10000475
301 Ga0265324_10003502
302 Ga0265320_10000378
303 Ga0265320_10004111
304 Ga0265320_10022928
305 Ga0265340_10054772
306 Ga0265327_10042671
307 Ga0265316_10035944
308 Ga0265316_10087580
309 Ga0307408_100005958
310 Ga0316575_10019559
311 Ga0316576_10003658
312 Ga0316576_10020171
313 Ga0316576_10026928
314 Ga0316576_10105242
315 Ga0316578_10002179
316 Ga0316578_10004040
317 Ga0307516_10004112
318 Ga0316577_10008203
319 Ga0307406_10000088
320 Ga0316585_10002891
321 Ga0316580_10001504
322 Ga0373954_0015347
323 Ga0316574_0000872
324 Ga0316574_0002487
325 Ga0373935_0026780
326 Ga0373927_0002826
327 Ga0373933_0021200
328 Ga0373947_0002100
329 Ga0316582_0130843
330 Ga0316584_0066222
331 Ga0316584_0070152
332 Ga0373925_0002786
333 Ga0436364_1220798
334 Ga0400483_026308
335 Ga0400483_195378
336 Ga0400483_250036
337 Ga0451577_0001991
338 Ga0451577_0002947
339 Ga0451577_0099867
340 Ga0451577_0178998
341 Ga0466969_0000903
342 Ga0466966_0004702
343 Ga0453684_0000188
344 Ga0453684_0000707
345 Ga0453684_0007853
346 Ga0453684_0029632
347 Ga0451576_0022136
348 Ga0451576_0023254
349 Ga0451576_0064971
350 Ga0451576_0186161
351 Ga0451576_0226924
352 Ga0495651_0092394
353 Ga0495582_0009809
354 Ga0495618_0000552
355 Ga0495630_0003088
356 Ga0495630_0025700
357 Ga0495630_0064373
358 Ga0495666_0003511
359 Ga0495640_0069840
360 Ga0495586_0001822
361 Ga0495621_0010444
362 Ga0495667_0080936
363 Ga0495634_0000669
364 Ga0495647_0042609
365 Ga0495613_0022908
366 Ga0495674_0004712
367 Ga0495674_0023355
368 Ga0495676_0018185
369 Ga0495602_0074376
370 Ga0501032_0025659
371 Ga0501034_0000105
372 Ga0501034_0040651
373 Ga0501034_0085302
374 Ga0501034_0139468
375 Ga0501043_0095377
376 Ga0501043_0149623
377 Ga0501047_0054211
378 Ga0501047_0186883
379 Ga0501073_0001101
380 Ga0501080_0021506
381 Ga0501035_0006916
382 Ga0501035_0007923
383 Ga0501044_0000506
384 Ga0501044_0001250
385 Ga0501044_0028272
386 nmdc:mga05p37_931_c1
387 nmdc:mga09592_54248_c1
388 nmdc:mga09592_75_c1
389 nmdc:mga06r32_15504_c1
390 nmdc:mga08y16_12545_c1
391 2687234131
392 2889056082

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

333

464

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gcn-assembly1.cif.gz_A truncated ftsh from a. aeolicus in r32 0.885 234 474
6he9-assembly1.cif.gz_K pan-proteasome in state 2 0.8843 232 478
6gcn-assembly2.cif.gz_C truncated ftsh from a. aeolicus in r32 0.8738 234 474
4ww0-assembly1.cif.gz_A-2 truncated ftsh from a. aeolicus 0.8737 229 476
7zbh-assembly1.cif.gz_A atp-dependent zinc metalloprotease ftsh (bb0789) from borrelia burgdorferi 0.8707 237 459
ID Description Score Start End Superfamily
af_A0A1D8PMQ4_348_423_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9066 406 474 1.10.8.60
6az0E02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8878 406 471 1.10.8.60
af_Q9FGM0_528_601_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8867 405 474 1.10.8.60
af_A2ZVG7_494_569_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8843 405 472 1.10.8.60
af_A0A1D6FLN2_395_468_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8784 405 474 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A2V7DBA6-F1-model_v4 AAA ATPase AAA+ lid domain-containing protein 0.9609 397 499 GO:0005524
AF-A0A7V4GZW8-F1-model_v4 ATPase 0.9484 1 238
AF-A0A7V4GZW8-F1-model_v4 ATPase 0.9331 1 238
AF-A0A7V8E3H1-F1-model_v4 Uncharacterized AAA domain-containing protein ycf46 0.9313 4 452 GO:0005524
GO:0016887
AF-A0A2V9H7K6-F1-model_v4 Uncharacterized AAA domain-containing protein ycf46 0.9288 75 501 GO:0005524
GO:0016887

Map