F301317
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 196 | 155 | 392 | 347 |
Family's Representative Sequence
| Representative Sequence | 3300005843|Ga0068860_100003085|Ga0068860_10000308512 |
| Length | 411 |
| Sequence | MSDEASAGPTTVHPIEHWVLHVDLDQFIAAVEVLRHPELAGKPVIVGGDGDPSKRGVVSTASYEARQYGVGSGMALRIAARKCPDAVFLPVDREAYDEASAGVMDTLRSLEWGGRPVVLEVLGWDEAFLAAGPRPGDDTAARGAQLGRGRPWAGAADELNVEAGQGSLPPVTLEGAAPSAGKGVAFAAHIRERVLAATRLHCSVGIGDNKLRGKIATEFGKPRGSYVLTAENWFEVMGDRPTTALWGIGGKTAKKLAALGIDTVTQLAESDARVLAAELGPTMGPWYHRIGRGVSDSAVTAEPWVPRAHGRETTFQEDLDDWVRIAEEVRALTRQVVTDIDKEGRPAARVGLKLRYRPFITISRSLTLPEATNDPATLAEAAVSLLERVEKERPVRLLGVRLEMVPPEGGY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 2 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 13 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 14 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 15 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 16 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 17 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 18 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 19 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 20 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 21 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 22 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 44 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 45 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 46 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 47 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 48 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 49 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 50 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 51 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 52 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 53 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 54 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 55 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 56 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 57 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 58 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 59 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 60 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 61 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 62 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 63 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 64 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 65 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 66 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 67 | 3300042437 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 | Metagenome | Rhizosphere |
| 68 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 69 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 70 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 71 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 72 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 73 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 74 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 92 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 93 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 94 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 95 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 96 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 97 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 98 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 99 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 100 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 101 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 102 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 103 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 104 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 123 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 124 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 125 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 132 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 133 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 135 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 136 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 137 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 138 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 139 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 140 | 2643221711 | Terrabacter sp. Root85 | Isolate | Unclassified |
| 141 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 142 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 143 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 144 | 2811994882 | Terrabacter sp. SLBN-196 | Isolate | Unclassified |
| 145 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 146 | 2818991458 | Terrabacter sp. 3211 | Isolate | Rhizosphere |
| 147 | 2818991462 | Terrabacter sp. 3264 | Isolate | Rhizosphere |
| 148 | 2818991469 | Terrabacter lapilli 3265 | Isolate | Rhizosphere |
| 149 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 150 | 2842888712 | Tsukamurella sp. R-71941 | Isolate | Unclassified |
| 151 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 152 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 153 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 154 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 155 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.76 |
| Metatranscriptomes | 1.02 |
| Isolates | 11.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.12 |
| Nodule | 0 |
| Rhizoplane | 11.73 |
| Rhizosphere | 70.41 |
| Stem | 0 |
| Stem Tuber | 0.51 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068860_100003085 | 3300005843 | Bacteria | 17230 |
| 2 | Ga0006562J51391_1021542 | 3300003578 | Bacteria | 3910 |
| 3 | Ga0006562J51391_1021543 | 3300003578 | Bacteria | 1855 |
| 4 | Ga0068868_100068800 | 3300005338 | Bacteria | 2820 |
| 5 | Ga0070661_100216928 | 3300005344 | Bacteria | 1466 |
| 6 | Ga0070668_100011923 | 3300005347 | Bacteria | 6471 |
| 7 | Ga0070667_100007122 | 3300005367 | Bacteria | 9298 |
| 8 | Ga0070663_100000117 | 3300005455 | Bacteria | 37277 |
| 9 | Ga0070678_100190300 | 3300005456 | Bacteria | 1687 |
| 10 | Ga0070684_100159006 | 3300005535 | Bacteria | 2049 |
| 11 | Ga0070684_100416078 | 3300005535 | Bacteria | 1240 |
| 12 | Ga0070693_100059933 | 3300005547 | Bacteria | 2208 |
| 13 | Ga0070664_100149394 | 3300005564 | Bacteria | 2062 |
| 14 | Ga0081455_10000352 | 3300005937 | Bacteria | 60576 |
| 15 | Ga0081455_10058549 | 3300005937 | Bacteria | 3259 |
| 16 | Ga0081538_10063080 | 3300005981 | Bacteria | 2107 |
| 17 | Ga0075365_10010165 | 3300006038 | Bacteria | 5464 |
| 18 | Ga0075365_10021072 | 3300006038 | Bacteria | 4058 |
| 19 | Ga0075365_10117858 | 3300006038 | Bacteria | 1829 |
| 20 | Ga0075365_10132894 | 3300006038 | Bacteria | 1723 |
| 21 | Ga0075368_10003264 | 3300006042 | Bacteria | 5401 |
| 22 | Ga0075370_10040271 | 3300006353 | Bacteria | 2635 |
| 23 | Ga0075428_100004037 | 3300006844 | Bacteria | 16128 |
| 24 | Ga0075428_100006897 | 3300006844 | Bacteria | 12616 |
| 25 | Ga0075430_100007755 | 3300006846 | Bacteria | 9070 |
| 26 | Ga0075431_100042426 | 3300006847 | Bacteria | 4692 |
| 27 | Ga0075433_10071563 | 3300006852 | Bacteria | 3048 |
| 28 | Ga0075429_100001988 | 3300006880 | Bacteria | 16983 |
| 29 | Ga0111539_10198168 | 3300009094 | Bacteria | 2342 |
| 30 | Ga0114129_10016875 | 3300009147 | Bacteria | 10395 |
| 31 | Ga0114129_10033388 | 3300009147 | Bacteria | 7272 |
| 32 | Ga0105243_10031850 | 3300009148 | Bacteria | 4068 |
| 33 | Ga0105242_10040782 | 3300009176 | Bacteria | 3741 |
| 34 | Ga0105238_10137374 | 3300009551 | Bacteria | 2422 |
| 35 | Ga0105246_10113476 | 3300011119 | Bacteria | 1995 |
| 36 | Ga0157372_10085731 | 3300013307 | Bacteria | 3573 |
| 37 | Ga0157372_10156290 | 3300013307 | Bacteria | 2634 |
| 38 | Ga0157375_10143397 | 3300013308 | Bacteria | 2517 |
| 39 | Ga0163161_10016161 | 3300017792 | Bacteria | 5210 |
| 40 | Ga0207705_10098078 | 3300025909 | Bacteria | 2153 |
| 41 | Ga0207657_10101326 | 3300025919 | Bacteria | 2390 |
| 42 | Ga0207690_10051330 | 3300025932 | Bacteria | 2758 |
| 43 | Ga0207669_10185030 | 3300025937 | Bacteria | 1497 |
| 44 | Ga0207679_10128018 | 3300025945 | Bacteria | 2033 |
| 45 | Ga0207658_10013057 | 3300025986 | Bacteria | 5672 |
| 46 | Ga0207678_10000093 | 3300026067 | Bacteria | 74658 |
| 47 | Ga0207678_10284950 | 3300026067 | Bacteria | 1418 |
| 48 | Ga0207708_10333369 | 3300026075 | Bacteria | 1241 |
| 49 | Ga0207675_100332989 | 3300026118 | Bacteria | 1484 |
| 50 | Ga0207683_10152274 | 3300026121 | Bacteria | 2087 |
| 51 | Ga0207683_10163343 | 3300026121 | Bacteria | 2014 |
| 52 | Ga0207698_10394524 | 3300026142 | Bacteria | 1321 |
| 53 | Ga0268264_10001626 | 3300028381 | Bacteria | 20764 |
| 54 | Ga0307408_100068408 | 3300031548 | Bacteria | 2615 |
| 55 | Ga0307405_10081826 | 3300031731 | Bacteria | 2112 |
| 56 | Ga0307405_10101680 | 3300031731 | Bacteria | 1929 |
| 57 | Ga0307410_10106772 | 3300031852 | Bacteria | 2018 |
| 58 | Ga0307407_10007993 | 3300031903 | Bacteria | 4825 |
| 59 | Ga0307407_10052894 | 3300031903 | Bacteria | 2334 |
| 60 | Ga0307412_10030697 | 3300031911 | Bacteria | 3387 |
| 61 | Ga0307409_100041439 | 3300031995 | Bacteria | 3439 |
| 62 | Ga0307409_100114838 | 3300031995 | Bacteria | 2266 |
| 63 | Ga0307416_100019467 | 3300032002 | Bacteria | 4813 |
| 64 | Ga0307416_100213614 | 3300032002 | Bacteria | 1843 |
| 65 | Ga0307416_100246331 | 3300032002 | Bacteria | 1736 |
| 66 | Ga0307416_100310753 | 3300032002 | Bacteria | 1573 |
| 67 | Ga0307411_10028049 | 3300032005 | Bacteria | 3417 |
| 68 | Ga0307411_10051625 | 3300032005 | Bacteria | 2684 |
| 69 | Ga0307411_10296973 | 3300032005 | Bacteria | 1294 |
| 70 | Ga0307415_100030757 | 3300032126 | Bacteria | 3450 |
| 71 | Ga0307510_10066767 | 3300033180 | Bacteria | 3628 |
| 72 | Ga0373934_0000004 | 3300035086 | Bacteria | 87334 |
| 73 | Ga0373953_0001205 | 3300035117 | Bacteria | 7370 |
| 74 | Ga0373954_0002885 | 3300035118 | Bacteria | 7254 |
| 75 | Ga0373956_0000601 | 3300035119 | Bacteria | 14759 |
| 76 | Ga0373957_0002328 | 3300035120 | Bacteria | 5393 |
| 77 | Ga0373955_0000025 | 3300035172 | Bacteria | 58341 |
| 78 | Ga0373924_0002276 | 3300035410 | Bacteria | 6445 |
| 79 | Ga0373933_0000119 | 3300035724 | Bacteria | 51009 |
| 80 | Ga0373937_0000306 | 3300036401 | Bacteria | 46226 |
| 81 | Ga0395901_0035183 | 3300038443 | Bacteria | 5175 |
| 82 | Ga0395901_0061413 | 3300038443 | Bacteria | 3910 |
| 83 | Ga0395901_0534956 | 3300038443 | Bacteria | 1189 |
| 84 | Ga0451853_3517755 | 3300041512 | Bacteria | 1089 |
| 85 | Ga0439431_0001337 | 3300041997 | Bacteria | 5427 |
| 86 | Ga0439446_0060665 | 3300042156 | Bacteria | 1143 |
| 87 | Ga0439434_0022438 | 3300042435 | Bacteria | 1898 |
| 88 | Ga0439444_0004831 | 3300042437 | Bacteria | 1974 |
| 89 | Ga0439460_0014391 | 3300042461 | Bacteria | 2079 |
| 90 | Ga0466972_0030141 | 3300044658 | Bacteria | 2671 |
| 91 | Ga0466972_0037600 | 3300044658 | Bacteria | 2366 |
| 92 | Ga0466970_0018666 | 3300044765 | Bacteria | 3593 |
| 93 | Ga0466970_0076305 | 3300044765 | Bacteria | 1806 |
| 94 | Ga0466957_0236522 | 3300044842 | Bacteria | 1211 |
| 95 | Ga0466960_0005256 | 3300044901 | Bacteria | 5114 |
| 96 | Ga0466960_0014478 | 3300044901 | Bacteria | 3377 |
| 97 | Ga0466960_0091565 | 3300044901 | Bacteria | 1551 |
| 98 | Ga0466967_0061602 | 3300045976 | Bacteria | 3329 |
| 99 | Ga0495592_0000200 | 3300046454 | Bacteria | 51023 |
| 100 | Ga0495651_0000151 | 3300046462 | Bacteria | 51025 |
| 101 | Ga0495653_0006911 | 3300046463 | Bacteria | 9323 |
| 102 | Ga0495608_0000147 | 3300046511 | Bacteria | 50943 |
| 103 | Ga0495628_0000753 | 3300046516 | Bacteria | 29919 |
| 104 | Ga0495652_0000276 | 3300046529 | Bacteria | 60614 |
| 105 | Ga0495587_0000045 | 3300046536 | Bacteria | 108362 |
| 106 | Ga0495667_0000051 | 3300046559 | Bacteria | 109277 |
| 107 | Ga0495657_0000044 | 3300046675 | Bacteria | 108383 |
| 108 | Ga0495599_0000101 | 3300046678 | Bacteria | 60499 |
| 109 | Ga0495623_0001529 | 3300046679 | Bacteria | 15620 |
| 110 | Ga0495646_0036726 | 3300046680 | Bacteria | 3034 |
| 111 | Ga0495600_0003438 | 3300046809 | Bacteria | 9308 |
| 112 | Ga0495604_0000046 | 3300047317 | Bacteria | 110553 |
| 113 | Ga0495680_0000108 | 3300047322 | Bacteria | 77095 |
| 114 | Ga0495675_0000119 | 3300047444 | Bacteria | 57079 |
| 115 | Ga0495602_0000167 | 3300048088 | Bacteria | 61216 |
| 116 | Ga0496100_0068909 | 3300048903 | Bacteria | 2354 |
| 117 | Ga0496101_0027862 | 3300048904 | Bacteria | 3940 |
| 118 | Ga0496102_0073319 | 3300048905 | Bacteria | 3146 |
| 119 | Ga0496103_0043841 | 3300048906 | Bacteria | 2755 |
| 120 | Ga0496103_0044377 | 3300048906 | Bacteria | 2739 |
| 121 | Ga0496104_0034858 | 3300048907 | Bacteria | 4695 |
| 122 | Ga0496104_0086217 | 3300048907 | Bacteria | 2998 |
| 123 | Ga0496105_0115392 | 3300048908 | Bacteria | 2215 |
| 124 | Ga0496105_0171259 | 3300048908 | Bacteria | 1780 |
| 125 | Ga0496107_0060117 | 3300048910 | Bacteria | 2750 |
| 126 | Ga0496108_0298331 | 3300048911 | Bacteria | 1403 |
| 127 | Ga0496109_0247555 | 3300048912 | Bacteria | 1678 |
| 128 | Ga0496109_0291770 | 3300048912 | Bacteria | 1538 |
| 129 | Ga0496110_0040008 | 3300048913 | Bacteria | 4084 |
| 130 | Ga0496111_0039422 | 3300048914 | Bacteria | 3386 |
| 131 | Ga0496111_0079983 | 3300048914 | Bacteria | 2384 |
| 132 | Ga0496113_0035584 | 3300048916 | Bacteria | 3642 |
| 133 | Ga0496113_0106738 | 3300048916 | Bacteria | 2175 |
| 134 | Ga0496113_0217535 | 3300048916 | Bacteria | 1522 |
| 135 | Ga0496114_0037796 | 3300048917 | Bacteria | 3993 |
| 136 | Ga0496114_0065214 | 3300048917 | Bacteria | 3051 |
| 137 | Ga0496114_0081104 | 3300048917 | Bacteria | 2740 |
| 138 | Ga0496114_0122923 | 3300048917 | Bacteria | 2234 |
| 139 | Ga0501033_0061086 | 3300049570 | Bacteria | 2778 |
| 140 | Ga0501038_0045722 | 3300049574 | Bacteria | 3799 |
| 141 | Ga0501040_0014706 | 3300049576 | Bacteria | 5162 |
| 142 | Ga0501041_0001871 | 3300049577 | Bacteria | 11787 |
| 143 | Ga0501042_0036364 | 3300049578 | Bacteria | 3493 |
| 144 | Ga0501042_0196758 | 3300049578 | Bacteria | 1454 |
| 145 | Ga0501046_0011775 | 3300049580 | Bacteria | 7468 |
| 146 | Ga0501048_0009795 | 3300049582 | Bacteria | 7184 |
| 147 | Ga0501067_0025041 | 3300049583 | Bacteria | 3309 |
| 148 | Ga0501067_0085400 | 3300049583 | Bacteria | 1751 |
| 149 | Ga0501067_0087546 | 3300049583 | Bacteria | 1728 |
| 150 | Ga0501068_0016754 | 3300049584 | Bacteria | 4229 |
| 151 | Ga0501068_0220207 | 3300049584 | Bacteria | 1206 |
| 152 | Ga0501069_0054339 | 3300049585 | Bacteria | 2231 |
| 153 | Ga0501069_0148136 | 3300049585 | Bacteria | 1348 |
| 154 | Ga0501070_0368601 | 3300049586 | Bacteria | 1164 |
| 155 | Ga0501071_0200282 | 3300049587 | Bacteria | 1500 |
| 156 | Ga0501072_0002851 | 3300049588 | Bacteria | 12977 |
| 157 | Ga0501076_0012700 | 3300049592 | Bacteria | 6305 |
| 158 | Ga0501077_0005331 | 3300049593 | Bacteria | 7816 |
| 159 | Ga0501079_0035779 | 3300049741 | Bacteria | 3823 |
| 160 | Ga0501081_0010954 | 3300049743 | Bacteria | 5926 |
| 161 | Ga0501035_0140160 | 3300049822 | Bacteria | 2103 |
| 162 | nmdc:mga00v17_93823_c1 | 3300050491 | Bacteria | 1888 |
| 163 | nmdc:mga0yw44_162429_c1 | 3300050492 | Bacteria | 1463 |
| 164 | nmdc:mga06z11_55004_c1 | 3300050494 | Bacteria | 2053 |
| 165 | nmdc:mga05p37_573_c1 | 3300050507 | Bacteria | 40363 |
| 166 | nmdc:mga09592_227_c1 | 3300050508 | Bacteria | 40641 |
| 167 | nmdc:mga0qj67_12480_c1 | 3300050509 | Bacteria | 6400 |
| 168 | nmdc:mga06r32_83_c1 | 3300050510 | Bacteria | 64174 |
| 169 | Ga0495595_0000441 | 3300053084 | Bacteria | 15723 |
| 170 | Ga0500644_0000143 | 3300053088 | Bacteria | 44243 |
| 171 | Ga0500556_0000502 | 3300053104 | Bacteria | 27054 |
| 172 | Ga0500593_000518 | 3300053117 | Bacteria | 15122 |
| 173 | Ga0501082_0248690 | 3300060353 | Bacteria | 1547 |
| 174 | Ga0530510_0036316 | 3300061734 | Bacteria | 3552 |
| 175 | 2583150249 | 2582580736 | Bacteria | 5325865 |
| 176 | 2643827656 | 2643221561 | Bacteria | 4984412 |
| 177 | 2644091522 | 2643221615 | Bacteria | 5487866 |
| 178 | 2644321325 | 2643221657 | Bacteria | 5490246 |
| 179 | 2644534908 | 2643221696 | Bacteria | 5431823 |
| 180 | 2644611694 | 2643221711 | Bacteria | 4865335 |
| 181 | 2645719578 | 2643221961 | Bacteria | 3919167 |
| 182 | 2645726476 | 2643221962 | Bacteria | 3874254 |
| 183 | 2738869556 | 2738541305 | Bacteria | 4910150 |
| 184 | 2812372835 | 2811994882 | Bacteria | 4688362 |
| 185 | 2819428287 | 2818991318 | Bacteria | 5266538 |
| 186 | 2819664654 | 2818991458 | Bacteria | 4794049 |
| 187 | 2819689648 | 2818991462 | Bacteria | 4320267 |
| 188 | 2819726800 | 2818991469 | Bacteria | 4644110 |
| 189 | 2835188672 | 2835188231 | Bacteria | 3476928 |
| 190 | 2842889520 | 2842888712 | Bacteria | 4279094 |
| 191 | 2857484464 | 2857481737 | Bacteria | 4761446 |
| 192 | 2899360562 | 2899359706 | Bacteria | 10940472 |
| 193 | 2899370343 | 2899370129 | Bacteria | 6781179 |
| 194 | 8003315560 | 8003314358 | Bacteria | 10575343 |
| 195 | 8003320778 | 8003314358 | Bacteria | 10575343 |
| 196 | 8047713360 | 8047710418 | Bacteria | 11023148 |
| 197 | Ga0068860_100003085 | |||
| 198 | Ga0006562J51391_1021542 | |||
| 199 | Ga0006562J51391_1021543 | |||
| 200 | Ga0068868_100068800 | |||
| 201 | Ga0070661_100216928 | |||
| 202 | Ga0070668_100011923 | |||
| 203 | Ga0070667_100007122 | |||
| 204 | Ga0070663_100000117 | |||
| 205 | Ga0070678_100190300 | |||
| 206 | Ga0070684_100159006 | |||
| 207 | Ga0070684_100416078 | |||
| 208 | Ga0070693_100059933 | |||
| 209 | Ga0070664_100149394 | |||
| 210 | Ga0081455_10000352 | |||
| 211 | Ga0081455_10058549 | |||
| 212 | Ga0081538_10063080 | |||
| 213 | Ga0075365_10010165 | |||
| 214 | Ga0075365_10021072 | |||
| 215 | Ga0075365_10117858 | |||
| 216 | Ga0075365_10132894 | |||
| 217 | Ga0075368_10003264 | |||
| 218 | Ga0075370_10040271 | |||
| 219 | Ga0075428_100004037 | |||
| 220 | Ga0075428_100006897 | |||
| 221 | Ga0075430_100007755 | |||
| 222 | Ga0075431_100042426 | |||
| 223 | Ga0075433_10071563 | |||
| 224 | Ga0075429_100001988 | |||
| 225 | Ga0111539_10198168 | |||
| 226 | Ga0114129_10016875 | |||
| 227 | Ga0114129_10033388 | |||
| 228 | Ga0105243_10031850 | |||
| 229 | Ga0105242_10040782 | |||
| 230 | Ga0105238_10137374 | |||
| 231 | Ga0105246_10113476 | |||
| 232 | Ga0157372_10085731 | |||
| 233 | Ga0157372_10156290 | |||
| 234 | Ga0157375_10143397 | |||
| 235 | Ga0163161_10016161 | |||
| 236 | Ga0207705_10098078 | |||
| 237 | Ga0207657_10101326 | |||
| 238 | Ga0207690_10051330 | |||
| 239 | Ga0207669_10185030 | |||
| 240 | Ga0207679_10128018 | |||
| 241 | Ga0207658_10013057 | |||
| 242 | Ga0207678_10000093 | |||
| 243 | Ga0207678_10284950 | |||
| 244 | Ga0207708_10333369 | |||
| 245 | Ga0207675_100332989 | |||
| 246 | Ga0207683_10152274 | |||
| 247 | Ga0207683_10163343 | |||
| 248 | Ga0207698_10394524 | |||
| 249 | Ga0268264_10001626 | |||
| 250 | Ga0307408_100068408 | |||
| 251 | Ga0307405_10081826 | |||
| 252 | Ga0307405_10101680 | |||
| 253 | Ga0307410_10106772 | |||
| 254 | Ga0307407_10007993 | |||
| 255 | Ga0307407_10052894 | |||
| 256 | Ga0307412_10030697 | |||
| 257 | Ga0307409_100041439 | |||
| 258 | Ga0307409_100114838 | |||
| 259 | Ga0307416_100019467 | |||
| 260 | Ga0307416_100213614 | |||
| 261 | Ga0307416_100246331 | |||
| 262 | Ga0307416_100310753 | |||
| 263 | Ga0307411_10028049 | |||
| 264 | Ga0307411_10051625 | |||
| 265 | Ga0307411_10296973 | |||
| 266 | Ga0307415_100030757 | |||
| 267 | Ga0307510_10066767 | |||
| 268 | Ga0373934_0000004 | |||
| 269 | Ga0373953_0001205 | |||
| 270 | Ga0373954_0002885 | |||
| 271 | Ga0373956_0000601 | |||
| 272 | Ga0373957_0002328 | |||
| 273 | Ga0373955_0000025 | |||
| 274 | Ga0373924_0002276 | |||
| 275 | Ga0373933_0000119 | |||
| 276 | Ga0373937_0000306 | |||
| 277 | Ga0395901_0035183 | |||
| 278 | Ga0395901_0061413 | |||
| 279 | Ga0395901_0534956 | |||
| 280 | Ga0451853_3517755 | |||
| 281 | Ga0439431_0001337 | |||
| 282 | Ga0439446_0060665 | |||
| 283 | Ga0439434_0022438 | |||
| 284 | Ga0439444_0004831 | |||
| 285 | Ga0439460_0014391 | |||
| 286 | Ga0466972_0030141 | |||
| 287 | Ga0466972_0037600 | |||
| 288 | Ga0466970_0018666 | |||
| 289 | Ga0466970_0076305 | |||
| 290 | Ga0466957_0236522 | |||
| 291 | Ga0466960_0005256 | |||
| 292 | Ga0466960_0014478 | |||
| 293 | Ga0466960_0091565 | |||
| 294 | Ga0466967_0061602 | |||
| 295 | Ga0495592_0000200 | |||
| 296 | Ga0495651_0000151 | |||
| 297 | Ga0495653_0006911 | |||
| 298 | Ga0495608_0000147 | |||
| 299 | Ga0495628_0000753 | |||
| 300 | Ga0495652_0000276 | |||
| 301 | Ga0495587_0000045 | |||
| 302 | Ga0495667_0000051 | |||
| 303 | Ga0495657_0000044 | |||
| 304 | Ga0495599_0000101 | |||
| 305 | Ga0495623_0001529 | |||
| 306 | Ga0495646_0036726 | |||
| 307 | Ga0495600_0003438 | |||
| 308 | Ga0495604_0000046 | |||
| 309 | Ga0495680_0000108 | |||
| 310 | Ga0495675_0000119 | |||
| 311 | Ga0495602_0000167 | |||
| 312 | Ga0496100_0068909 | |||
| 313 | Ga0496101_0027862 | |||
| 314 | Ga0496102_0073319 | |||
| 315 | Ga0496103_0043841 | |||
| 316 | Ga0496103_0044377 | |||
| 317 | Ga0496104_0034858 | |||
| 318 | Ga0496104_0086217 | |||
| 319 | Ga0496105_0115392 | |||
| 320 | Ga0496105_0171259 | |||
| 321 | Ga0496107_0060117 | |||
| 322 | Ga0496108_0298331 | |||
| 323 | Ga0496109_0247555 | |||
| 324 | Ga0496109_0291770 | |||
| 325 | Ga0496110_0040008 | |||
| 326 | Ga0496111_0039422 | |||
| 327 | Ga0496111_0079983 | |||
| 328 | Ga0496113_0035584 | |||
| 329 | Ga0496113_0106738 | |||
| 330 | Ga0496113_0217535 | |||
| 331 | Ga0496114_0037796 | |||
| 332 | Ga0496114_0065214 | |||
| 333 | Ga0496114_0081104 | |||
| 334 | Ga0496114_0122923 | |||
| 335 | Ga0501033_0061086 | |||
| 336 | Ga0501038_0045722 | |||
| 337 | Ga0501040_0014706 | |||
| 338 | Ga0501041_0001871 | |||
| 339 | Ga0501042_0036364 | |||
| 340 | Ga0501042_0196758 | |||
| 341 | Ga0501046_0011775 | |||
| 342 | Ga0501048_0009795 | |||
| 343 | Ga0501067_0025041 | |||
| 344 | Ga0501067_0085400 | |||
| 345 | Ga0501067_0087546 | |||
| 346 | Ga0501068_0016754 | |||
| 347 | Ga0501068_0220207 | |||
| 348 | Ga0501069_0054339 | |||
| 349 | Ga0501069_0148136 | |||
| 350 | Ga0501070_0368601 | |||
| 351 | Ga0501071_0200282 | |||
| 352 | Ga0501072_0002851 | |||
| 353 | Ga0501076_0012700 | |||
| 354 | Ga0501077_0005331 | |||
| 355 | Ga0501079_0035779 | |||
| 356 | Ga0501081_0010954 | |||
| 357 | Ga0501035_0140160 | |||
| 358 | nmdc:mga00v17_93823_c1 | |||
| 359 | nmdc:mga0yw44_162429_c1 | |||
| 360 | nmdc:mga06z11_55004_c1 | |||
| 361 | nmdc:mga05p37_573_c1 | |||
| 362 | nmdc:mga09592_227_c1 | |||
| 363 | nmdc:mga0qj67_12480_c1 | |||
| 364 | nmdc:mga06r32_83_c1 | |||
| 365 | Ga0495595_0000441 | |||
| 366 | Ga0500644_0000143 | |||
| 367 | Ga0500556_0000502 | |||
| 368 | Ga0500593_000518 | |||
| 369 | Ga0501082_0248690 | |||
| 370 | Ga0530510_0036316 | |||
| 371 | 2583150249 | |||
| 372 | 2643827656 | |||
| 373 | 2644091522 | |||
| 374 | 2644321325 | |||
| 375 | 2644534908 | |||
| 376 | 2644611694 | |||
| 377 | 2645719578 | |||
| 378 | 2645726476 | |||
| 379 | 2738869556 | |||
| 380 | 2812372835 | |||
| 381 | 2819428287 | |||
| 382 | 2819664654 | |||
| 383 | 2819689648 | |||
| 384 | 2819726800 | |||
| 385 | 2835188672 | |||
| 386 | 2842889520 | |||
| 387 | 2857484464 | |||
| 388 | 2899360562 | |||
| 389 | 2899370343 | |||
| 390 | 8003315560 | |||
| 391 | 8003320778 | |||
| 392 | 8047713360 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6jul-assembly1.cif.gz_F | msdpo4-dna complex 1 | 0.98 | 6 | 346 |
| 6jum-assembly2.cif.gz_F | msdpo4-dna complex 2 | 0.9799 | 6 | 346 |
| 6jur-assembly2.cif.gz_F | msdpo4-dna complex 5 | 0.973 | 6 | 346 |
| 6jun-assembly2.cif.gz_A | msdpo4-dna complex 3 | 0.9666 | 6 | 346 |
| 6jul-assembly1.cif.gz_F | msdpo4-dna complex 1 | 0.9605 | 6 | 346 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FWZ5_4_63_3.40.1170.60 | Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; | 0.9798 | 19 | 78 | 3.40.1170.60 |
| af_P9WNT1_245_346_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9738 | 242 | 343 | 3.30.1490.100 |
| 4dezA03 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain | 0.9661 | 169 | 238 | 1.10.150.20 |
| af_P9WNT1_245_346_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9645 | 242 | 343 | 3.30.1490.100 |
| af_O74944_370_477_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9483 | 244 | 341 | 3.30.1490.100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A521MHK7-F1-model_v4 | DNA polymerase IV (EC 2.7.7.7) | 0.9858 | 1 | 184 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A0U1DDC5-F1-model_v4 | DNA polymerase IV | 0.9846 | 48 | 209 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A1P8YK57-F1-model_v4 | ImpB/mucB/samB family protein | 0.9755 | 13 | 83 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A0Q9KLB4-F1-model_v4 | DNA-directed DNA polymerase (EC 2.7.7.7) | 0.9717 | 10 | 348 |
GO:0003684
GO:0003887 GO:0005829 GO:0006260 GO:0009432 GO:0042276 GO:0046872 |
| AF-A0A365ZYB8-F1-model_v4 | DNA polymerase IV (Pol IV) (EC 2.7.7.7) | 0.9704 | 1 | 345 |
GO:0000287
GO:0003684 GO:0003887 GO:0005829 GO:0006261 GO:0009432 GO:0042276 |