F301260

General Info

Members Datasets Scaffolds Average Seq Length
196 134 392 283

Family's Representative Sequence

Representative Sequence 3300005547|Ga0070693_100210341|Ga0070693_1002103411
Length 336
Sequence MYQDSVEQDARCSTKCHDCLYVGFWPKAEDLLCIHTSNVARYDHPVKPSMNNVLPAEIISCIRRALEEDIGSGDATTNSIVPITATLKGKIVAKQTGVVAGLEIAKAVFRELDDGVIFKQLVSDGSQVENKTVIATVEGSARALLTGERTALNFLGRMSGIATLTRQFVNAVSGTDAQILDTRKTAPGLRTLDKKAVQLGGGRNHRVGLFDMILIKDNHIDFAGSITTAVERARAAGNDLEIEVETRSLEDVKEALSLGVERILLDNMTLETMRRAVALAWRRAKLEASGNINLENVADVARTGVEYISVGALTHSPKVFDVSLEWAENLSRENGT

Samples

Sample ID Description Type Environment
1 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
86 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
90 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
107 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
134 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 3.57
Rhizosphere 95.92
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070693_100210341 3300005547 Bacteria 1269
2 JGI25406J46586_10026028 3300003203 Bacteria 2262
3 Ga0065715_10089955 3300005293 Bacteria 8022
4 Ga0065715_10111043 3300005293 Bacteria 2591
5 Ga0070683_100002392 3300005329 Bacteria 14892
6 Ga0068869_100419135 3300005334 Bacteria 1104
7 Ga0070680_100010392 3300005336 Bacteria 7176
8 Ga0070668_100002758 3300005347 Bacteria 12916
9 Ga0070675_100040150 3300005354 Bacteria 3820
10 Ga0070713_100099537 3300005436 Unclassified 2515
11 Ga0070705_100057818 3300005440 Bacteria 2289
12 Ga0070681_10011284 3300005458 Bacteria 8837
13 Ga0070706_100415408 3300005467 Unclassified 1252
14 Ga0070707_100097707 3300005468 Bacteria 2844
15 Ga0070707_100112395 3300005468 Bacteria 2642
16 Ga0070679_100010340 3300005530 Bacteria 8848
17 Ga0070684_100153883 3300005535 Bacteria 2084
18 Ga0070697_100000627 3300005536 Bacteria 26765
19 Ga0070697_100057378 3300005536 Bacteria 3168
20 Ga0068853_100535141 3300005539 Bacteria 1109
21 Ga0070696_100054574 3300005546 Bacteria 2785
22 Ga0070696_100194826 3300005546 Bacteria 1510
23 Ga0070665_100139102 3300005548 Bacteria 2432
24 Ga0068857_100430035 3300005577 Bacteria 1232
25 Ga0068857_100498007 3300005577 Bacteria 1143
26 Ga0068856_100275986 3300005614 Bacteria 1697
27 Ga0068852_100029832 3300005616 Bacteria 4483
28 Ga0068859_100026894 3300005617 Bacteria 5770
29 Ga0068864_100013606 3300005618 Bacteria 6746
30 Ga0068863_100103249 3300005841 Unclassified 2711
31 Ga0068863_100191997 3300005841 Bacteria 1963
32 Ga0068862_100128602 3300005844 Bacteria 2238
33 Ga0081539_10009944 3300005985 Bacteria 7841
34 Ga0081539_10017082 3300005985 Bacteria 5122
35 Ga0070712_100001071 3300006175 Bacteria 16531
36 Ga0097621_100065957 3300006237 Bacteria 2981
37 Ga0097621_100168474 3300006237 Bacteria 1887
38 Ga0068871_100014402 3300006358 Bacteria 5897
39 Ga0075428_100254505 3300006844 Bacteria 1892
40 Ga0075433_10000173 3300006852 Bacteria 35469
41 Ga0075433_10001186 3300006852 Bacteria 18958
42 Ga0075433_10039997 3300006852 Bacteria 4057
43 Ga0075433_10262253 3300006852 Bacteria 1532
44 Ga0075434_100000379 3300006871 Bacteria 32446
45 Ga0075434_100058086 3300006871 Bacteria 3846
46 Ga0075434_100481943 3300006871 Bacteria 1261
47 Ga0075429_100026502 3300006880 Bacteria 5034
48 Ga0075436_100000230 3300006914 Bacteria 34982
49 Ga0075436_100098769 3300006914 Bacteria 2032
50 Ga0097620_100026894 3300006931 Bacteria 5770
51 Ga0075435_100001767 3300007076 Bacteria 14087
52 Ga0075435_100091657 3300007076 Bacteria 2509
53 Ga0105240_10074918 3300009093 Bacteria 4176
54 Ga0111539_10247754 3300009094 Bacteria 2074
55 Ga0111539_10632117 3300009094 Bacteria 1246
56 Ga0114129_10003757 3300009147 Bacteria 21399
57 Ga0114129_10027380 3300009147 Bacteria 8071
58 Ga0114129_10168451 3300009147 Bacteria 2988
59 Ga0114129_10659881 3300009147 Bacteria 1349
60 Ga0105243_10519818 3300009148 Bacteria 1132
61 Ga0105242_10062093 3300009176 Bacteria 3074
62 Ga0105248_10004200 3300009177 Bacteria 15925
63 Ga0105249_10000381 3300009553 Bacteria 44082
64 Ga0099796_10049389 3300010159 Unclassified 1455
65 Ga0105239_10159596 3300010375 Bacteria 2518
66 Ga0157374_10025562 3300013296 Bacteria 5304
67 Ga0157378_10042391 3300013297 Bacteria 4040
68 Ga0163162_10000023 3300013306 Bacteria 193395
69 Ga0163162_10017456 3300013306 Bacteria 7022
70 Ga0157372_10083364 3300013307 Bacteria 3621
71 Ga0157375_10153257 3300013308 Bacteria 2442
72 Ga0157375_10218730 3300013308 Bacteria 2063
73 Ga0157375_10741626 3300013308 Bacteria 1134
74 Ga0163163_10000302 3300014325 Bacteria 48452
75 Ga0163163_10020405 3300014325 Bacteria 6239
76 Ga0157380_10000059 3300014326 Bacteria 62280
77 Ga0157380_10013642 3300014326 Bacteria 5931
78 Ga0157380_10080639 3300014326 Bacteria 2660
79 Ga0157380_10094226 3300014326 Bacteria 2478
80 Ga0157376_10370680 3300014969 Bacteria 1376
81 Ga0207707_10000015 3300025912 Bacteria 259670
82 Ga0207695_10332762 3300025913 Bacteria 1407
83 Ga0207693_10002622 3300025915 Bacteria 15629
84 Ga0207663_10000104 3300025916 Bacteria 40548
85 Ga0207660_10007241 3300025917 Bacteria 7181
86 Ga0207660_10014420 3300025917 Bacteria 5199
87 Ga0207662_10063647 3300025918 Bacteria 2218
88 Ga0207652_10000252 3300025921 Bacteria 55772
89 Ga0207646_10071076 3300025922 Bacteria 3108
90 Ga0207646_10095331 3300025922 Bacteria 2666
91 Ga0207646_10398423 3300025922 Unclassified 1243
92 Ga0207706_10198195 3300025933 Bacteria 1761
93 Ga0207711_10023466 3300025941 Bacteria 5164
94 Ga0207689_10013946 3300025942 Bacteria 6845
95 Ga0207661_10000492 3300025944 Bacteria 25390
96 Ga0207651_10108970 3300025960 Bacteria 2074
97 Ga0207712_10000214 3300025961 Bacteria 57860
98 Ga0207712_10110102 3300025961 Bacteria 2064
99 Ga0207668_10003584 3300025972 Bacteria 9124
100 Ga0207668_10056204 3300025972 Bacteria 2740
101 Ga0207639_10481077 3300026041 Bacteria 1132
102 Ga0207708_10188133 3300026075 Bacteria 1642
103 Ga0207676_10007690 3300026095 Bacteria 7657
104 Ga0207676_10144393 3300026095 Bacteria 2042
105 Ga0207674_10220807 3300026116 Bacteria 1843
106 Ga0207683_10455937 3300026121 Bacteria 1179
107 Ga0207428_10001780 3300027907 Bacteria 22062
108 Ga0268266_10108824 3300028379 Bacteria 2453
109 Ga0268265_10072636 3300028380 Bacteria 2684
110 Ga0265322_10018424 3300028654 Bacteria 2008
111 Ga0265327_10005788 3300031251 Bacteria 10168
112 Ga0265342_10005341 3300031712 Archaea 9825
113 Ga0316576_10343385 3300031727 Bacteria 1111
114 Ga0316578_10013457 3300031728 Unclassified 4341
115 Ga0316577_10059868 3300031733 Unclassified 2125
116 Ga0316577_10142374 3300031733 Unclassified 1351
117 Ga0307415_100015805 3300032126 Bacteria 4481
118 Ga0316580_10085400 3300032139 Bacteria 965
119 Ga0316574_0026781 3300035398 Bacteria 3469
120 Ga0316574_0081823 3300035398 Bacteria 2051
121 Ga0373947_0260119 3300035725 Unclassified 1150
122 Ga0373937_0159267 3300036401 Bacteria 2116
123 Ga0316582_0237586 3300036647 Unclassified 1248
124 Ga0316584_0283725 3300036712 Bacteria 1203
125 Ga0316584_0331643 3300036712 Unclassified 1095
126 Ga0395900_0388242 3300037418 Bacteria 1363
127 Ga0395900_0400497 3300037418 Bacteria 1337
128 Ga0395900_0760398 3300037418 Bacteria 899
129 Ga0395898_0091353 3300037466 Bacteria 2929
130 Ga0395901_0311286 3300038443 Bacteria 1631
131 Ga0451577_0081425 3300042876 Bacteria 2888
132 Ga0451577_0082472 3300042876 Bacteria 2868
133 Ga0451577_0138346 3300042876 Bacteria 2187
134 Ga0451577_0392560 3300042876 Unclassified 1259
135 Ga0453683_0000105 3300044673 Bacteria 124993
136 Ga0453683_0027884 3300044673 Bacteria 3578
137 Ga0453684_0001032 3300044712 Bacteria 89042
138 Ga0453684_0007656 3300044712 Bacteria 19769
139 Ga0453684_0017144 3300044712 Bacteria 11249
140 Ga0453684_0018918 3300044712 Bacteria 10532
141 Ga0453684_0089662 3300044712 Bacteria 3802
142 Ga0453684_0118480 3300044712 Bacteria 3202
143 Ga0453684_0123606 3300044712 Bacteria 3119
144 Ga0453684_0684712 3300044712 Bacteria 1116
145 Ga0451576_0000830 3300045051 Bacteria 60243
146 Ga0451576_0023577 3300045051 Bacteria 6662
147 Ga0451576_0027884 3300045051 Bacteria 6058
148 Ga0451576_0059041 3300045051 Bacteria 4005
149 Ga0451576_0061306 3300045051 Bacteria 3922
150 Ga0451576_0277242 3300045051 Unclassified 1753
151 Ga0495603_0124737 3300046455 Bacteria 1501
152 Ga0495629_0000189 3300046459 Bacteria 55743
153 Ga0495641_0000106 3300046461 Bacteria 58534
154 Ga0495594_0000003 3300046499 Bacteria 199267
155 Ga0495606_0000221 3300046507 Bacteria 101157
156 Ga0495630_0000018 3300046517 Bacteria 186064
157 Ga0495631_0008447 3300046518 Bacteria 5190
158 Ga0495637_0139966 3300046520 Bacteria 919
159 Ga0495644_0002133 3300046523 Bacteria 7936
160 Ga0495598_0077049 3300046537 Bacteria 1062
161 Ga0495645_0082742 3300046543 Bacteria 2302
162 Ga0495622_0000714 3300046557 Bacteria 18760
163 Ga0495656_0018656 3300046615 Bacteria 2669
164 Ga0495588_0000274 3300046674 Bacteria 39224
165 Ga0495647_0002735 3300046681 Bacteria 5594
166 Ga0495624_0002494 3300046690 Bacteria 13951
167 Ga0495676_0048565 3300047321 Bacteria 3421
168 Ga0496102_0488340 3300048905 Bacteria 1153
169 Ga0496104_0409268 3300048907 Bacteria 1269
170 Ga0496104_0528645 3300048907 Bacteria 1090
171 Ga0496108_0037723 3300048911 Bacteria 4026
172 Ga0496109_0000028 3300048912 Bacteria 168138
173 Ga0496109_0080729 3300048912 Bacteria 2997
174 Ga0496112_0773533 3300048915 Bacteria 886
175 Ga0501031_0000091 3300049568 Bacteria 48610
176 Ga0501071_0031013 3300049587 Bacteria 3786
177 Ga0501075_0178355 3300049591 Bacteria 1621
178 Ga0501076_0127399 3300049592 Bacteria 2064
179 Ga0501079_0063707 3300049741 Bacteria 2844
180 Ga0501045_0414369 3300049824 Bacteria 1002
181 nmdc:mga09592_118735_c1 3300050508 Bacteria 2270
182 nmdc:mga08y16_184951_c1 3300050511 Bacteria 2163
183 nmdc:mga08y16_329678_c1 3300050511 Bacteria 1570
184 nmdc:mga0n895_2475_c1 3300050512 Bacteria 14439
185 nmdc:mga0n895_96536_c1 3300050512 Bacteria 2961
186 nmdc:mga0n895_98979_c1 3300050512 Bacteria 2924
187 nmdc:mga0rr50_16235_c1 3300050513 Bacteria 4939
188 nmdc:mga08x19_11_c1 3300050514 Bacteria 403007
189 nmdc:mga08x19_230461_c1 3300050514 Bacteria 1275
190 nmdc:mga0a205_16233_c1 3300050515 Bacteria 6973
191 nmdc:mga0a205_470_c1 3300050515 Bacteria 31351
192 nmdc:mga0a205_64829_c1 3300050515 Unclassified 3528
193 nmdc:mga0a205_857_c1 3300050515 Bacteria 24876
194 Ga0500628_012488 3300053129 Bacteria 1566
195 Ga0501082_0239304 3300060353 Bacteria 1580
196 Ga0530510_0067214 3300061734 Bacteria 2600
197 Ga0070693_100210341
198 JGI25406J46586_10026028
199 Ga0065715_10089955
200 Ga0065715_10111043
201 Ga0070683_100002392
202 Ga0068869_100419135
203 Ga0070680_100010392
204 Ga0070668_100002758
205 Ga0070675_100040150
206 Ga0070713_100099537
207 Ga0070705_100057818
208 Ga0070681_10011284
209 Ga0070706_100415408
210 Ga0070707_100097707
211 Ga0070707_100112395
212 Ga0070679_100010340
213 Ga0070684_100153883
214 Ga0070697_100000627
215 Ga0070697_100057378
216 Ga0068853_100535141
217 Ga0070696_100054574
218 Ga0070696_100194826
219 Ga0070665_100139102
220 Ga0068857_100430035
221 Ga0068857_100498007
222 Ga0068856_100275986
223 Ga0068852_100029832
224 Ga0068859_100026894
225 Ga0068864_100013606
226 Ga0068863_100103249
227 Ga0068863_100191997
228 Ga0068862_100128602
229 Ga0081539_10009944
230 Ga0081539_10017082
231 Ga0070712_100001071
232 Ga0097621_100065957
233 Ga0097621_100168474
234 Ga0068871_100014402
235 Ga0075428_100254505
236 Ga0075433_10000173
237 Ga0075433_10001186
238 Ga0075433_10039997
239 Ga0075433_10262253
240 Ga0075434_100000379
241 Ga0075434_100058086
242 Ga0075434_100481943
243 Ga0075429_100026502
244 Ga0075436_100000230
245 Ga0075436_100098769
246 Ga0097620_100026894
247 Ga0075435_100001767
248 Ga0075435_100091657
249 Ga0105240_10074918
250 Ga0111539_10247754
251 Ga0111539_10632117
252 Ga0114129_10003757
253 Ga0114129_10027380
254 Ga0114129_10168451
255 Ga0114129_10659881
256 Ga0105243_10519818
257 Ga0105242_10062093
258 Ga0105248_10004200
259 Ga0105249_10000381
260 Ga0099796_10049389
261 Ga0105239_10159596
262 Ga0157374_10025562
263 Ga0157378_10042391
264 Ga0163162_10000023
265 Ga0163162_10017456
266 Ga0157372_10083364
267 Ga0157375_10153257
268 Ga0157375_10218730
269 Ga0157375_10741626
270 Ga0163163_10000302
271 Ga0163163_10020405
272 Ga0157380_10000059
273 Ga0157380_10013642
274 Ga0157380_10080639
275 Ga0157380_10094226
276 Ga0157376_10370680
277 Ga0207707_10000015
278 Ga0207695_10332762
279 Ga0207693_10002622
280 Ga0207663_10000104
281 Ga0207660_10007241
282 Ga0207660_10014420
283 Ga0207662_10063647
284 Ga0207652_10000252
285 Ga0207646_10071076
286 Ga0207646_10095331
287 Ga0207646_10398423
288 Ga0207706_10198195
289 Ga0207711_10023466
290 Ga0207689_10013946
291 Ga0207661_10000492
292 Ga0207651_10108970
293 Ga0207712_10000214
294 Ga0207712_10110102
295 Ga0207668_10003584
296 Ga0207668_10056204
297 Ga0207639_10481077
298 Ga0207708_10188133
299 Ga0207676_10007690
300 Ga0207676_10144393
301 Ga0207674_10220807
302 Ga0207683_10455937
303 Ga0207428_10001780
304 Ga0268266_10108824
305 Ga0268265_10072636
306 Ga0265322_10018424
307 Ga0265327_10005788
308 Ga0265342_10005341
309 Ga0316576_10343385
310 Ga0316578_10013457
311 Ga0316577_10059868
312 Ga0316577_10142374
313 Ga0307415_100015805
314 Ga0316580_10085400
315 Ga0316574_0026781
316 Ga0316574_0081823
317 Ga0373947_0260119
318 Ga0373937_0159267
319 Ga0316582_0237586
320 Ga0316584_0283725
321 Ga0316584_0331643
322 Ga0395900_0388242
323 Ga0395900_0400497
324 Ga0395900_0760398
325 Ga0395898_0091353
326 Ga0395901_0311286
327 Ga0451577_0081425
328 Ga0451577_0082472
329 Ga0451577_0138346
330 Ga0451577_0392560
331 Ga0453683_0000105
332 Ga0453683_0027884
333 Ga0453684_0001032
334 Ga0453684_0007656
335 Ga0453684_0017144
336 Ga0453684_0018918
337 Ga0453684_0089662
338 Ga0453684_0118480
339 Ga0453684_0123606
340 Ga0453684_0684712
341 Ga0451576_0000830
342 Ga0451576_0023577
343 Ga0451576_0027884
344 Ga0451576_0059041
345 Ga0451576_0061306
346 Ga0451576_0277242
347 Ga0495603_0124737
348 Ga0495629_0000189
349 Ga0495641_0000106
350 Ga0495594_0000003
351 Ga0495606_0000221
352 Ga0495630_0000018
353 Ga0495631_0008447
354 Ga0495637_0139966
355 Ga0495644_0002133
356 Ga0495598_0077049
357 Ga0495645_0082742
358 Ga0495622_0000714
359 Ga0495656_0018656
360 Ga0495588_0000274
361 Ga0495647_0002735
362 Ga0495624_0002494
363 Ga0495676_0048565
364 Ga0496102_0488340
365 Ga0496104_0409268
366 Ga0496104_0528645
367 Ga0496108_0037723
368 Ga0496109_0000028
369 Ga0496109_0080729
370 Ga0496112_0773533
371 Ga0501031_0000091
372 Ga0501071_0031013
373 Ga0501075_0178355
374 Ga0501076_0127399
375 Ga0501079_0063707
376 Ga0501045_0414369
377 nmdc:mga09592_118735_c1
378 nmdc:mga08y16_184951_c1
379 nmdc:mga08y16_329678_c1
380 nmdc:mga0n895_2475_c1
381 nmdc:mga0n895_96536_c1
382 nmdc:mga0n895_98979_c1
383 nmdc:mga0rr50_16235_c1
384 nmdc:mga08x19_11_c1
385 nmdc:mga08x19_230461_c1
386 nmdc:mga0a205_16233_c1
387 nmdc:mga0a205_470_c1
388 nmdc:mga0a205_64829_c1
389 nmdc:mga0a205_857_c1
390 Ga0500628_012488
391 Ga0501082_0239304
392 Ga0530510_0067214

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02749

QRPTase_N

Quinolinate phosphoribosyl transferase, N-terminal domain

74

159

0.99

PF01729

QRPTase_C

Quinolinate phosphoribosyl transferase, C-terminal domain

161

325

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x1o-assembly1.cif.gz_A crystal structure of project id tt0268 from thermus thermophilus hb8 0.9643 29 292
3l0g-assembly1.cif.gz_C crystal structure of nicotinate-nucleotide pyrophosphorylase from ehrlichia chaffeensis at 2.05a resolution 0.9621 31 292
1qpn-assembly1.cif.gz_A quinolinate phosphoribosyl transferase from mycobacterium tuberculosis in complex with ncnn 0.96 27 290
1qap-assembly1.cif.gz_B quinolinic acid phosphoribosyltransferase with bound quinolinic acid 0.958 27 292
7xgn-assembly1.cif.gz_B quinolinate phosphoribosyl transferase (qaprtase) from streptomyces pyridomyceticus nrrl b-2517 in complex with nicotinic acid (na) 0.9521 25 292
ID Description Score Start End Superfamily
1x1oB01 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9727 26 145 3.90.1170.20
1qpnA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9721 136 281 3.20.20.70
3l0gD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9698 136 281 3.20.20.70
af_Q9ZU32_47_153_3.90.1170.20 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9697 30 134 3.90.1170.20
af_P30011_147_280_3.90.1170.20 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9686 148 275 3.90.1170.20
ID Description Score Start End GO Terms
AF-A0A7V9IY12-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) 0.9953 209 292 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A350ZWQ6-F1-model_v4 deleted 0.9936 208 292
AF-A0A7X9H7J3-F1-model_v4 nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) 0.9935 28 292 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A832C1P2-F1-model_v4 nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) 0.9935 154 288 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A3M1A9N6-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) (EC 2.4.2.19) 0.9931 25 128 GO:0004514
GO:0005737
GO:0009435
GO:0034213

Map