F300922

General Info

Members Datasets Scaffolds Average Seq Length
196 160 392 209

Family's Representative Sequence

Representative Sequence 3300002987|JGI25159J45721_1014428|JGI25159J45721_10144282
Length 247
Sequence MPPLRWLELDCLDLANWPWRPVRFIAICAASTLLPGSPAMYVPPAFREDRIEILHAAIREAGLATLVSLGADGLVASHVPMLLDPEAGPNGTLYGHLAKANPHATGGVAGVEALAIFQGPDAYITPSWYETKRQTGKVVPTWNYVAIHASGPLEMFDDADRLLDLVTRLTRRHEGGRAAPWAVSDAPADFVRGQLKGIVGFALPIARLEGKWKMSQNRPAADRAGVAEGLGAEGREDVAALVPVERG

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
43 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
65 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
148 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
151 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
157 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
158 2643221736 Bosea sp. Root483D1 Isolate Unclassified
159 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
160 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.94
Metatranscriptomes 0.51
Isolates 2.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.16
Nodule 0
Rhizoplane 0
Rhizosphere 86.73
Stem 0
Stem Tuber 0
Unclassified 0.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1014428 3300002987 Bacteria 1785
2 JGI25159J45721_1014187 3300002987 Bacteria 1809
3 JGI25151J46595_10000180 3300003187 Bacteria 79747
4 Ga0058692_1028611 3300003856 Bacteria 1073
5 Ga0070658_10072053 3300005327 Bacteria 2831
6 Ga0070658_10505520 3300005327 Bacteria 1044
7 Ga0070658_10751786 3300005327 Bacteria 847
8 Ga0070683_100234390 3300005329 Bacteria 1745
9 Ga0070683_100373249 3300005329 Bacteria 1359
10 Ga0070670_100901890 3300005331 Bacteria 801
11 Ga0070680_100483965 3300005336 Bacteria 1058
12 Ga0068868_100436583 3300005338 Bacteria 1136
13 Ga0070691_10202533 3300005341 Bacteria 1043
14 Ga0070668_100133707 3300005347 Bacteria 1993
15 Ga0070674_100039605 3300005356 Bacteria 3183
16 Ga0070713_100848394 3300005436 Bacteria 877
17 Ga0070700_100333829 3300005441 Bacteria 1118
18 Ga0070708_100976989 3300005445 Bacteria 794
19 Ga0070663_100005348 3300005455 Bacteria 7620
20 Ga0070681_10170697 3300005458 Bacteria 2097
21 Ga0068867_100360558 3300005459 Bacteria 1216
22 Ga0070707_100391181 3300005468 Bacteria 1350
23 Ga0070699_101016713 3300005518 Bacteria 760
24 Ga0070679_100036337 3300005530 Bacteria 4888
25 Ga0070695_100511575 3300005545 Bacteria 930
26 Ga0070696_100036583 3300005546 Bacteria 3385
27 Ga0070665_100487291 3300005548 Bacteria 1244
28 Ga0070704_100146457 3300005549 Bacteria 1851
29 Ga0068855_100358028 3300005563 Bacteria 1606
30 Ga0068857_100131847 3300005577 Bacteria 2254
31 Ga0070702_100409452 3300005615 Bacteria 972
32 Ga0068852_100177033 3300005616 Bacteria 2003
33 Ga0070712_100374184 3300006175 Bacteria 1171
34 Ga0105240_10233484 3300009093 Bacteria 2136
35 Ga0105248_10398810 3300009177 Bacteria 1549
36 Ga0105238_10322394 3300009551 Bacteria 1531
37 Ga0105238_11166077 3300009551 Bacteria 794
38 Ga0105239_11089872 3300010375 Bacteria 919
39 Ga0157373_10508925 3300013100 Bacteria 870
40 Ga0157369_10078607 3300013105 Bacteria 3534
41 Ga0157369_10539229 3300013105 Bacteria 1206
42 Ga0157374_10213092 3300013296 Bacteria 1894
43 Ga0157378_10157600 3300013297 Bacteria 2120
44 Ga0157375_10232630 3300013308 Bacteria 2002
45 Ga0157377_10049222 3300014745 Bacteria 2368
46 Ga0157379_10370091 3300014968 Bacteria 1314
47 Ga0213875_10077726 3300021388 Bacteria 1549
48 Ga0228598_1013806 3300024227 Bacteria 1598
49 Ga0209130_1002055 3300025284 Bacteria 10906
50 Ga0209025_1000422 3300025294 Bacteria 84434
51 Ga0209025_1028230 3300025294 Bacteria 2758
52 Ga0209025_1107806 3300025294 Bacteria 863
53 Ga0207426_1000133 3300025302 Bacteria 206783
54 Ga0207680_10241266 3300025903 Bacteria 1245
55 Ga0207707_10267672 3300025912 Bacteria 1482
56 Ga0207695_10573336 3300025913 Bacteria 1010
57 Ga0207693_10471884 3300025915 Bacteria 980
58 Ga0207660_10501504 3300025917 Bacteria 985
59 Ga0207681_10823921 3300025923 Bacteria 776
60 Ga0207650_10440124 3300025925 Bacteria 1084
61 Ga0207669_10504235 3300025937 Bacteria 969
62 Ga0207711_10636988 3300025941 Bacteria 995
63 Ga0207640_10770051 3300025981 Bacteria 831
64 Ga0207678_10107653 3300026067 Bacteria 2378
65 Ga0207648_10134079 3300026089 Bacteria 2181
66 Ga0207674_10342035 3300026116 Bacteria 1446
67 Ga0207683_10506002 3300026121 Bacteria 1116
68 Ga0207698_10143512 3300026142 Bacteria 2061
69 Ga0209371_1000395 3300027312 Bacteria 46013
70 Ga0265357_1001364 3300028023 Bacteria 1774
71 Ga0268266_11353292 3300028379 Bacteria 687
72 Ga0268256_1000278 3300030500 Bacteria 53027
73 Ga0265770_1045003 3300030878 Bacteria 783
74 Ga0265325_10035152 3300031241 Bacteria 2663
75 Ga0265313_10200458 3300031595 Unclassified 831
76 Ga0307508_10122699 3300031616 Bacteria 2201
77 Ga0307405_10235330 3300031731 Bacteria 1353
78 Ga0307410_10017867 3300031852 Bacteria 4271
79 Ga0307406_10195358 3300031901 Bacteria 1485
80 Ga0307416_100209232 3300032002 Bacteria 1859
81 Ga0307510_10267010 3300033180 Bacteria 1189
82 Ga0373923_0086816 3300035111 Bacteria 1364
83 Ga0373955_0472304 3300035172 Bacteria 765
84 Ga0373935_0135731 3300035692 Bacteria 1657
85 Ga0373935_0186053 3300035692 Bacteria 1428
86 Ga0373935_0436510 3300035692 Bacteria 944
87 Ga0373927_0116034 3300035695 Bacteria 1746
88 Ga0373947_0135387 3300035725 Bacteria 1576
89 Ga0373947_0252726 3300035725 Bacteria 1166
90 Ga0373947_0625001 3300035725 Bacteria 734
91 Ga0373937_0012028 3300036401 Bacteria 7596
92 Ga0373937_0235011 3300036401 Bacteria 1726
93 Ga0373937_0363677 3300036401 Bacteria 1371
94 Ga0373925_0011096 3300037068 Bacteria 6540
95 Ga0373925_0163408 3300037068 Bacteria 1755
96 Ga0395900_0050959 3300037418 Bacteria 4264
97 Ga0395898_0243549 3300037466 Bacteria 1715
98 Ga0395905_0068443 3300037471 Bacteria 3325
99 Ga0395905_0076948 3300037471 Bacteria 3127
100 Ga0395905_0115443 3300037471 Bacteria 2523
101 Ga0436364_0353415 3300037853 Bacteria 2627
102 Ga0436360_0369371 3300039438 Bacteria 3209
103 Ga0436360_1260834 3300039438 Bacteria 8848
104 Ga0436361_0806096 3300039447 Bacteria 1839
105 Ga0436361_1038574 3300039447 Bacteria 17268
106 Ga0439431_0043626 3300041997 Bacteria 1148
107 Ga0451577_0197906 3300042876 Bacteria 1814
108 Ga0466969_0189312 3300044656 Bacteria 940
109 Ga0466972_0054765 3300044658 Bacteria 1919
110 Ga0453683_0128700 3300044673 Bacteria 1595
111 Ga0466965_0033604 3300044683 Bacteria 2507
112 Ga0466966_0000308 3300044684 Bacteria 31625
113 Ga0466961_0001100 3300044693 Bacteria 16614
114 Ga0466971_0062764 3300044719 Bacteria 1681
115 Ga0466970_0065704 3300044765 Bacteria 1947
116 Ga0466957_0022168 3300044842 Bacteria 3745
117 Ga0466957_0498423 3300044842 Bacteria 844
118 Ga0466960_0096648 3300044901 Bacteria 1514
119 Ga0466959_0000140 3300045049 Bacteria 47107
120 Ga0466958_0308694 3300045836 Bacteria 1016
121 Ga0495592_0348966 3300046454 Bacteria 949
122 Ga0495651_0016445 3300046462 Bacteria 5730
123 Ga0495608_0204119 3300046511 Bacteria 1244
124 Ga0495610_0020624 3300046512 Bacteria 3655
125 Ga0495628_0037640 3300046516 Bacteria 3879
126 Ga0495630_0444138 3300046517 Bacteria 994
127 Ga0495640_0157227 3300046533 Bacteria 1458
128 Ga0495640_0225818 3300046533 Bacteria 1179
129 Ga0495587_0117070 3300046536 Bacteria 1528
130 Ga0495645_0044630 3300046543 Bacteria 3233
131 Ga0495657_0309156 3300046675 Bacteria 941
132 Ga0495599_0152547 3300046678 Bacteria 1430
133 Ga0495658_0320693 3300046683 Bacteria 982
134 Ga0495624_0402031 3300046690 Bacteria 822
135 Ga0495604_0316844 3300047317 Bacteria 1043
136 Ga0495680_0014208 3300047322 Bacteria 6908
137 Ga0495673_0002708 3300047469 Bacteria 12180
138 Ga0495684_0188283 3300047471 Bacteria 1527
139 Ga0496121_0001112 3300048924 Bacteria 47429
140 Ga0496126_0272388 3300048929 Bacteria 1405
141 Ga0501032_0062098 3300049569 Bacteria 2504
142 Ga0501033_0005892 3300049570 Bacteria 9627
143 Ga0501033_0204364 3300049570 Bacteria 1410
144 Ga0501034_0032962 3300049571 Bacteria 5259
145 Ga0501034_0512176 3300049571 Bacteria 1112
146 Ga0501036_0090016 3300049572 Bacteria 2592
147 Ga0501037_0004359 3300049573 Bacteria 10274
148 Ga0501038_0042716 3300049574 Bacteria 3947
149 Ga0501039_0027108 3300049575 Bacteria 4405
150 Ga0501043_0021615 3300049579 Bacteria 5044
151 Ga0501046_0049150 3300049580 Bacteria 3337
152 Ga0501046_0077546 3300049580 Bacteria 2572
153 Ga0501046_0199146 3300049580 Bacteria 1491
154 Ga0501047_0008709 3300049581 Bacteria 9574
155 Ga0501047_0039684 3300049581 Bacteria 4553
156 Ga0501047_0126616 3300049581 Bacteria 2435
157 Ga0501048_0013315 3300049582 Bacteria 6105
158 Ga0501048_0088854 3300049582 Bacteria 2180
159 Ga0501048_0275980 3300049582 Bacteria 1195
160 Ga0501067_0053118 3300049583 Bacteria 2245
161 Ga0501067_0061646 3300049583 Bacteria 2076
162 Ga0501068_0292342 3300049584 Bacteria 1042
163 Ga0501069_0021707 3300049585 Bacteria 3487
164 Ga0501070_0010144 3300049586 Bacteria 7976
165 Ga0501071_0494202 3300049587 Bacteria 938
166 Ga0501072_0082356 3300049588 Bacteria 2551
167 Ga0501073_0003266 3300049589 Bacteria 12167
168 Ga0501073_0068812 3300049589 Bacteria 2467
169 Ga0501074_0017655 3300049590 Bacteria 5182
170 Ga0501075_0032264 3300049591 Bacteria 3891
171 Ga0501076_0116008 3300049592 Bacteria 2167
172 Ga0501079_0319623 3300049741 Bacteria 1215
173 Ga0501080_0003982 3300049742 Bacteria 13076
174 Ga0501080_0295268 3300049742 Bacteria 1471
175 Ga0501035_0007985 3300049822 Bacteria 9864
176 Ga0501035_0057221 3300049822 Bacteria 3477
177 Ga0501044_0009414 3300049823 Bacteria 10642
178 Ga0501044_0127854 3300049823 Bacteria 2537
179 Ga0495601_0131249 3300053077 Bacteria 1632
180 Ga0500556_0031984 3300053104 Bacteria 1795
181 Ga0500595_005693 3300053119 Bacteria 5403
182 Ga0500642_0168518 3300053130 Bacteria 1025
183 Ga0500568_0042204 3300053139 Bacteria 1829
184 Ga0500577_0015176 3300053142 Bacteria 2401
185 Ga0500588_0004926 3300053146 Bacteria 2926
186 Ga0500616_0004774 3300053153 Bacteria 9506
187 Ga0500616_0020614 3300053153 Bacteria 3701
188 Ga0501084_0085151 3300054114 Bacteria 2654
189 Ga0501082_0312503 3300060353 Bacteria 1368
190 Ga0501082_0389496 3300060353 Bacteria 1216
191 Ga0530510_0231849 3300061734 Bacteria 1373
192 2511175357 2510917026 Bacteria 7046020
193 2523107917 2522572158 Bacteria 6514390
194 2644746876 2643221736 Bacteria 6608466
195 2821450473 2821443989 Bacteria 7658172
196 2844535598 2844533157 Bacteria 7517899
197 JGI25159J45721_1014428
198 JGI25159J45721_1014187
199 JGI25151J46595_10000180
200 Ga0058692_1028611
201 Ga0070658_10072053
202 Ga0070658_10505520
203 Ga0070658_10751786
204 Ga0070683_100234390
205 Ga0070683_100373249
206 Ga0070670_100901890
207 Ga0070680_100483965
208 Ga0068868_100436583
209 Ga0070691_10202533
210 Ga0070668_100133707
211 Ga0070674_100039605
212 Ga0070713_100848394
213 Ga0070700_100333829
214 Ga0070708_100976989
215 Ga0070663_100005348
216 Ga0070681_10170697
217 Ga0068867_100360558
218 Ga0070707_100391181
219 Ga0070699_101016713
220 Ga0070679_100036337
221 Ga0070695_100511575
222 Ga0070696_100036583
223 Ga0070665_100487291
224 Ga0070704_100146457
225 Ga0068855_100358028
226 Ga0068857_100131847
227 Ga0070702_100409452
228 Ga0068852_100177033
229 Ga0070712_100374184
230 Ga0105240_10233484
231 Ga0105248_10398810
232 Ga0105238_10322394
233 Ga0105238_11166077
234 Ga0105239_11089872
235 Ga0157373_10508925
236 Ga0157369_10078607
237 Ga0157369_10539229
238 Ga0157374_10213092
239 Ga0157378_10157600
240 Ga0157375_10232630
241 Ga0157377_10049222
242 Ga0157379_10370091
243 Ga0213875_10077726
244 Ga0228598_1013806
245 Ga0209130_1002055
246 Ga0209025_1000422
247 Ga0209025_1028230
248 Ga0209025_1107806
249 Ga0207426_1000133
250 Ga0207680_10241266
251 Ga0207707_10267672
252 Ga0207695_10573336
253 Ga0207693_10471884
254 Ga0207660_10501504
255 Ga0207681_10823921
256 Ga0207650_10440124
257 Ga0207669_10504235
258 Ga0207711_10636988
259 Ga0207640_10770051
260 Ga0207678_10107653
261 Ga0207648_10134079
262 Ga0207674_10342035
263 Ga0207683_10506002
264 Ga0207698_10143512
265 Ga0209371_1000395
266 Ga0265357_1001364
267 Ga0268266_11353292
268 Ga0268256_1000278
269 Ga0265770_1045003
270 Ga0265325_10035152
271 Ga0265313_10200458
272 Ga0307508_10122699
273 Ga0307405_10235330
274 Ga0307410_10017867
275 Ga0307406_10195358
276 Ga0307416_100209232
277 Ga0307510_10267010
278 Ga0373923_0086816
279 Ga0373955_0472304
280 Ga0373935_0135731
281 Ga0373935_0186053
282 Ga0373935_0436510
283 Ga0373927_0116034
284 Ga0373947_0135387
285 Ga0373947_0252726
286 Ga0373947_0625001
287 Ga0373937_0012028
288 Ga0373937_0235011
289 Ga0373937_0363677
290 Ga0373925_0011096
291 Ga0373925_0163408
292 Ga0395900_0050959
293 Ga0395898_0243549
294 Ga0395905_0068443
295 Ga0395905_0076948
296 Ga0395905_0115443
297 Ga0436364_0353415
298 Ga0436360_0369371
299 Ga0436360_1260834
300 Ga0436361_0806096
301 Ga0436361_1038574
302 Ga0439431_0043626
303 Ga0451577_0197906
304 Ga0466969_0189312
305 Ga0466972_0054765
306 Ga0453683_0128700
307 Ga0466965_0033604
308 Ga0466966_0000308
309 Ga0466961_0001100
310 Ga0466971_0062764
311 Ga0466970_0065704
312 Ga0466957_0022168
313 Ga0466957_0498423
314 Ga0466960_0096648
315 Ga0466959_0000140
316 Ga0466958_0308694
317 Ga0495592_0348966
318 Ga0495651_0016445
319 Ga0495608_0204119
320 Ga0495610_0020624
321 Ga0495628_0037640
322 Ga0495630_0444138
323 Ga0495640_0157227
324 Ga0495640_0225818
325 Ga0495587_0117070
326 Ga0495645_0044630
327 Ga0495657_0309156
328 Ga0495599_0152547
329 Ga0495658_0320693
330 Ga0495624_0402031
331 Ga0495604_0316844
332 Ga0495680_0014208
333 Ga0495673_0002708
334 Ga0495684_0188283
335 Ga0496121_0001112
336 Ga0496126_0272388
337 Ga0501032_0062098
338 Ga0501033_0005892
339 Ga0501033_0204364
340 Ga0501034_0032962
341 Ga0501034_0512176
342 Ga0501036_0090016
343 Ga0501037_0004359
344 Ga0501038_0042716
345 Ga0501039_0027108
346 Ga0501043_0021615
347 Ga0501046_0049150
348 Ga0501046_0077546
349 Ga0501046_0199146
350 Ga0501047_0008709
351 Ga0501047_0039684
352 Ga0501047_0126616
353 Ga0501048_0013315
354 Ga0501048_0088854
355 Ga0501048_0275980
356 Ga0501067_0053118
357 Ga0501067_0061646
358 Ga0501068_0292342
359 Ga0501069_0021707
360 Ga0501070_0010144
361 Ga0501071_0494202
362 Ga0501072_0082356
363 Ga0501073_0003266
364 Ga0501073_0068812
365 Ga0501074_0017655
366 Ga0501075_0032264
367 Ga0501076_0116008
368 Ga0501079_0319623
369 Ga0501080_0003982
370 Ga0501080_0295268
371 Ga0501035_0007985
372 Ga0501035_0057221
373 Ga0501044_0009414
374 Ga0501044_0127854
375 Ga0495601_0131249
376 Ga0500556_0031984
377 Ga0500595_005693
378 Ga0500642_0168518
379 Ga0500568_0042204
380 Ga0500577_0015176
381 Ga0500588_0004926
382 Ga0500616_0004774
383 Ga0500616_0020614
384 Ga0501084_0085151
385 Ga0501082_0312503
386 Ga0501082_0389496
387 Ga0530510_0231849
388 2511175357
389 2523107917
390 2644746876
391 2821450473
392 2844535598

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04299

FMN_bind_2

Putative FMN-binding domain

40

207

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7eaw-assembly2.cif.gz_B trehalase of arabidopsis thaliana acid mutant -d380a trehalose complex 0.9721 180 205
7e9x-assembly3.cif.gz_C trehalase of arabidopsis thaliana acid mutant -d380a 0.9709 180 205
2ol5-assembly1.cif.gz_A crystal structure of a protease synthase and sporulation negative regulatory protein pai 2 from bacillus stearothermophilus 0.9485 9 205
2ol5-assembly1.cif.gz_B crystal structure of a protease synthase and sporulation negative regulatory protein pai 2 from bacillus stearothermophilus 0.9408 10 206
2ol5-assembly1.cif.gz_B crystal structure of a protease synthase and sporulation negative regulatory protein pai 2 from bacillus stearothermophilus 0.936 10 206
ID Description Score Start End Superfamily
af_A0A1D8PQI8_1_209_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.93 1 206 2.30.110.10
2ol5A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9041 9 204 2.30.110.10
2ol5A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8898 9 204 2.30.110.10
1rfeA01 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7974 10 179 2.30.110.10
6eciG00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7921 10 173 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A0J6S2U1-F1-model_v4 Transcriptional regulator 0.9934 1 208
AF-A0A529LUL4-F1-model_v4 FMN-binding negative transcriptional regulator 0.9929 1 178
AF-A0A2G8M8H2-F1-model_v4 deleted 0.9928 1 208
AF-B9KX17-F1-model_v4 deleted 0.9917 9 209
AF-I2E249-F1-model_v4 FMN-binding negative transcriptional regulator 0.9909 1 207

Map