F300537

General Info

Members Datasets Scaffolds Average Seq Length
195 135 390 574

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0015421|Ga0495638_0015421_247_2250
Length 639
Sequence MSLLSSLSNRIFLASALLTVLSIGVAVGVINRTATARAEEDLARSLEEAGTLVEQFQSLLFEHLVREARLIADLPKLKAAVDVDHEPTVQPLAADYRTQIDADLFLVTNREGRTLGLAEDLGLPPGAVLDFDGTKQARAGHETVSFWPRPEGLLQVVSVPIYLGPEVLGTLTAGVSLDRRLATRIKALTRTEVVFGSEGVIHASTLPDANFAELAPLLTTPGVATVVVGGEEFVAVRRLLVLGPAQRGVTPGSPGSTDNSGSGPSVVISGSSGVGVDAARAPVAVILRSRTEHLRFLRTLHTALAFTALAAVIGATVLSFAVARTITRPLGGLIATMREMAATGDLTRQLPAVPASRWEDEDARVLTSTFRALTASLGRFQHEAAQRERLSSLGRLSTVVAHEIRNPLMIIKASLRTLRRDARHPDANEAIGDIEEEVRRLNALVNEVLDYAKPIRFDYGAVDLNALCRAAATAASADQPAPAVRLFEDRKAGEIVTDAERLRLVLINVLTNARDAVLARQAGAETAMPAPVTPAAQATAAGSLNANVELRTDCPGTDTVRITVTDRGSGILPEHLARIFDPFFTTKRTGSGLGLAIAKNIVEGLGGTIAIASEPSRGTTVRITLPREAPRDRRQAGEA

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
84 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
85 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
86 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
87 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
88 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
89 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
90 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
91 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
92 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
108 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
130 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
131 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
132 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
133 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.59
Nodule 0
Rhizoplane 5.64
Rhizosphere 90.26
Stem 0
Stem Tuber 0
Unclassified 0.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0015421 3300046460 Bacteria 5131
2 Ga0065712_10001666 3300005290 Bacteria 10105
3 Ga0065715_10090839 3300005293 Bacteria 6394
4 Ga0065707_10008840 3300005295 Bacteria 3146
5 Ga0070683_100002575 3300005329 Bacteria 14494
6 Ga0070670_100001542 3300005331 Bacteria 18568
7 Ga0070670_100006769 3300005331 Bacteria 9711
8 Ga0070670_100023601 3300005331 Bacteria 5293
9 Ga0068869_100000871 3300005334 Bacteria 17376
10 Ga0068869_100024283 3300005334 Bacteria 4198
11 Ga0070661_100043068 3300005344 Bacteria 3297
12 Ga0070674_100027104 3300005356 Bacteria 3752
13 Ga0070674_100093257 3300005356 Bacteria 2178
14 Ga0070673_100001103 3300005364 Bacteria 15474
15 Ga0070673_100020387 3300005364 Bacteria 4782
16 Ga0070673_100026912 3300005364 Bacteria 4255
17 Ga0070713_100011807 3300005436 Bacteria 6382
18 Ga0070705_100009786 3300005440 Bacteria 4778
19 Ga0070708_100138114 3300005445 Bacteria 2259
20 Ga0070662_100104127 3300005457 Bacteria 2153
21 Ga0068867_100032628 3300005459 Bacteria 3767
22 Ga0070698_100062058 3300005471 Bacteria 3771
23 Ga0070699_100009598 3300005518 Bacteria 8386
24 Ga0070699_100107381 3300005518 Bacteria 2449
25 Ga0070679_100033194 3300005530 Bacteria 5111
26 Ga0070684_100000152 3300005535 Bacteria 47168
27 Ga0070672_100039186 3300005543 Bacteria 3628
28 Ga0070672_100039906 3300005543 Bacteria 3599
29 Ga0070672_100067452 3300005543 Bacteria 2835
30 Ga0070686_100042678 3300005544 Bacteria 2842
31 Ga0070704_100037462 3300005549 Bacteria 3314
32 Ga0070704_100042849 3300005549 Bacteria 3133
33 Ga0070664_100000686 3300005564 Bacteria 25845
34 Ga0070664_100006959 3300005564 Bacteria 9117
35 Ga0070664_100051527 3300005564 Bacteria 3485
36 Ga0070664_100069469 3300005564 Bacteria 3014
37 Ga0068857_100008226 3300005577 Bacteria 9017
38 Ga0068861_100143450 3300005719 Bacteria 1952
39 Ga0068863_100053733 3300005841 Bacteria 3818
40 Ga0068862_100023879 3300005844 Bacteria 5125
41 Ga0081455_10047348 3300005937 Bacteria 3725
42 Ga0081539_10000084 3300005985 Bacteria 218801
43 Ga0075365_10000429 3300006038 Bacteria 15576
44 Ga0075364_10001809 3300006051 Bacteria 11848
45 Ga0097621_100009774 3300006237 Bacteria 6982
46 Ga0097621_100055431 3300006237 Bacteria 3237
47 Ga0097621_100143368 3300006237 Bacteria 2043
48 Ga0068871_100013281 3300006358 Bacteria 6110
49 Ga0068871_100059923 3300006358 Bacteria 3103
50 Ga0075428_100000377 3300006844 Bacteria 44160
51 Ga0075428_100001411 3300006844 Bacteria 25608
52 Ga0075428_100004044 3300006844 Bacteria 16119
53 Ga0075428_100058013 3300006844 Bacteria 4238
54 Ga0075430_100058579 3300006846 Bacteria 3238
55 Ga0075431_100016526 3300006847 Bacteria 7490
56 Ga0075431_100054428 3300006847 Bacteria 4126
57 Ga0075431_100132789 3300006847 Bacteria 2567
58 Ga0075434_100004041 3300006871 Bacteria 13155
59 Ga0075434_100033879 3300006871 Bacteria 5042
60 Ga0075434_100074455 3300006871 Bacteria 3389
61 Ga0075434_100152369 3300006871 Bacteria 2332
62 Ga0075429_100004661 3300006880 Bacteria 11801
63 Ga0068865_100020534 3300006881 Bacteria 4284
64 Ga0068865_100041660 3300006881 Bacteria 3126
65 Ga0068865_100048512 3300006881 Bacteria 2922
66 Ga0075436_100023070 3300006914 Bacteria 4274
67 Ga0075435_100003625 3300007076 Bacteria 10514
68 Ga0075435_100018748 3300007076 Bacteria 5271
69 Ga0075435_100125925 3300007076 Bacteria 2141
70 Ga0111539_10000560 3300009094 Bacteria 47624
71 Ga0111539_10019860 3300009094 Bacteria 8278
72 Ga0105245_10117183 3300009098 Bacteria 2484
73 Ga0114129_10000090 3300009147 Bacteria 86472
74 Ga0114129_10003850 3300009147 Bacteria 21164
75 Ga0114129_10006660 3300009147 Bacteria 16404
76 Ga0114129_10162701 3300009147 Bacteria 3047
77 Ga0105242_10032360 3300009176 Bacteria 4181
78 Ga0105242_10047075 3300009176 Bacteria 3501
79 Ga0105248_10007841 3300009177 Bacteria 11727
80 Ga0105248_10085810 3300009177 Bacteria 3542
81 Ga0105248_10167955 3300009177 Bacteria 2473
82 Ga0105249_10001338 3300009553 Bacteria 21546
83 Ga0157375_10148949 3300013308 Bacteria 2474
84 Ga0163163_10023862 3300014325 Bacteria 5813
85 Ga0163163_10136407 3300014325 Bacteria 2495
86 Ga0157377_10044254 3300014745 Bacteria 2481
87 Ga0157376_10005217 3300014969 Bacteria 9067
88 Ga0207642_10028890 3300025899 Bacteria 2289
89 Ga0207645_10002734 3300025907 Bacteria 13735
90 Ga0207645_10021781 3300025907 Bacteria 4175
91 Ga0207681_10029797 3300025923 Bacteria 3550
92 Ga0207650_10010025 3300025925 Bacteria 6487
93 Ga0207650_10024824 3300025925 Bacteria 4266
94 Ga0207669_10022707 3300025937 Bacteria 3338
95 Ga0207704_10018733 3300025938 Bacteria 3621
96 Ga0207704_10073194 3300025938 Bacteria 2181
97 Ga0207691_10016556 3300025940 Bacteria 6999
98 Ga0207691_10037896 3300025940 Bacteria 4462
99 Ga0207711_10056330 3300025941 Bacteria 3378
100 Ga0207711_10060635 3300025941 Bacteria 3260
101 Ga0207711_10101148 3300025941 Bacteria 2550
102 Ga0207689_10015731 3300025942 Bacteria 6406
103 Ga0207661_10002069 3300025944 Bacteria 13800
104 Ga0207679_10000849 3300025945 Bacteria 19640
105 Ga0207679_10013929 3300025945 Bacteria 5273
106 Ga0207679_10024098 3300025945 Bacteria 4169
107 Ga0207651_10002369 3300025960 Bacteria 8988
108 Ga0207651_10009597 3300025960 Bacteria 5310
109 Ga0207712_10005001 3300025961 Bacteria 8382
110 Ga0207640_10062350 3300025981 Bacteria 2473
111 Ga0207658_10073637 3300025986 Bacteria 2593
112 Ga0207677_10119755 3300026023 Bacteria 1978
113 Ga0207678_10012209 3300026067 Bacteria 7544
114 Ga0207708_10006807 3300026075 Bacteria 8454
115 Ga0207641_10040827 3300026088 Bacteria 3887
116 Ga0207648_10005485 3300026089 Bacteria 12779
117 Ga0207674_10017317 3300026116 Bacteria 7862
118 Ga0207698_10126350 3300026142 Bacteria 2176
119 Ga0207428_10015238 3300027907 Bacteria 6652
120 Ga0207428_10038287 3300027907 Bacteria 3899
121 Ga0268265_10106222 3300028380 Bacteria 2280
122 Ga0268264_10089872 3300028381 Bacteria 2645
123 Ga0307405_10017229 3300031731 Bacteria 3960
124 Ga0307413_10008386 3300031824 Bacteria 4877
125 Ga0307412_10009782 3300031911 Bacteria 5504
126 Ga0307412_10013708 3300031911 Bacteria 4762
127 Ga0307409_100026194 3300031995 Bacteria 4108
128 Ga0307409_100048883 3300031995 Bacteria 3222
129 Ga0307416_100017805 3300032002 Bacteria 4984
130 Ga0307416_100040755 3300032002 Bacteria 3611
131 Ga0307414_10108400 3300032004 Bacteria 2107
132 Ga0373930_0001261 3300034816 Bacteria 3740
133 Ga0373959_0001468 3300034820 Bacteria 3764
134 Ga0373928_0002243 3300035084 Bacteria 3766
135 Ga0373940_0000502 3300035088 Bacteria 6105
136 Ga0373949_0001047 3300035090 Bacteria 8464
137 Ga0373951_0000611 3300035091 Bacteria 9826
138 Ga0373952_0000348 3300035092 Bacteria 7805
139 Ga0373932_0000722 3300035112 Bacteria 9961
140 Ga0373941_0002054 3300035115 Bacteria 4367
141 Ga0373961_0001854 3300035241 Bacteria 5777
142 Ga0373937_0044494 3300036401 Bacteria 4055
143 Ga0436365_1777247 3300039437 Bacteria 2382
144 Ga0450923_002563 3300042125 Bacteria 2628
145 Ga0451577_0015025 3300042876 Bacteria 7204
146 Ga0451576_0023923 3300045051 Bacteria 6604
147 Ga0451576_0120305 3300045051 Bacteria 2734
148 Ga0466967_0177196 3300045976 Bacteria 2009
149 Ga0495588_0004102 3300046674 Bacteria 6409
150 Ga0496101_0000253 3300048904 Bacteria 38375
151 Ga0496104_0005090 3300048907 Bacteria 11468
152 Ga0496105_0015107 3300048908 Bacteria 6145
153 Ga0496106_0023208 3300048909 Bacteria 4609
154 Ga0496107_0054096 3300048910 Bacteria 2897
155 Ga0496108_0068735 3300048911 Bacteria 2989
156 Ga0496109_0001103 3300048912 Bacteria 22385
157 Ga0496110_0000490 3300048913 Bacteria 26916
158 Ga0496111_0001524 3300048914 Bacteria 13299
159 Ga0496112_0000535 3300048915 Bacteria 26020
160 Ga0496114_0001314 3300048917 Bacteria 18831
161 Ga0501034_0035726 3300049571 Bacteria 5037
162 Ga0501040_0010283 3300049576 Bacteria 6120
163 Ga0501048_0032303 3300049582 Bacteria 3783
164 Ga0501071_0004724 3300049587 Bacteria 8663
165 Ga0501075_0072077 3300049591 Bacteria 2611
166 Ga0501076_0003921 3300049592 Bacteria 10493
167 Ga0501077_0016629 3300049593 Bacteria 4637
168 Ga0501079_0027355 3300049741 Bacteria 4372
169 Ga0501045_0081640 3300049824 Bacteria 2384
170 nmdc:mga05p37_13843_c1 3300050507 Bacteria 9664
171 nmdc:mga05p37_3636_c1 3300050507 Bacteria 18022
172 nmdc:mga05p37_6916_c1 3300050507 Bacteria 13371
173 nmdc:mga05p37_96006_c1 3300050507 Bacteria 3652
174 nmdc:mga09592_46648_c1 3300050508 Bacteria 3650
175 nmdc:mga0qj67_49243_c1 3300050509 Unclassified 3331
176 nmdc:mga0qj67_52095_c1 3300050509 Bacteria 3238
177 nmdc:mga08y16_23542_c1 3300050511 Bacteria 6507
178 nmdc:mga08y16_4810_c1 3300050511 Bacteria 14085
179 nmdc:mga0n895_1096_c1 3300050512 Bacteria 19794
180 nmdc:mga0n895_76544_c1 3300050512 Bacteria 3327
181 nmdc:mga0n895_90121_c1 3300050512 Bacteria 3068
182 nmdc:mga0rr50_111863_c1 3300050513 Bacteria 2162
183 nmdc:mga0rr50_2069_c1 3300050513 Bacteria 11199
184 nmdc:mga0rr50_8261_c1 3300050513 Bacteria 6471
185 nmdc:mga08x19_6061_c1 3300050514 Bacteria 7142
186 nmdc:mga0a205_101798_c1 3300050515 Bacteria 2771
187 nmdc:mga0a205_3687_c1 3300050515 Bacteria 13709
188 Ga0495619_0054370 3300053085 Bacteria 2650
189 Ga0500651_0044518 3300053093 Bacteria 2795
190 Ga0500555_000510 3300053103 Bacteria 15661
191 Ga0500568_0005094 3300053139 Bacteria 6872
192 Ga0500616_0002603 3300053153 Bacteria 14769
193 Ga0500645_000103 3300053730 Bacteria 67414
194 Ga0501084_0023795 3300054114 Bacteria 5109
195 Ga0501082_0044043 3300060353 Bacteria 3850
196 Ga0495638_0015421
197 Ga0065712_10001666
198 Ga0065715_10090839
199 Ga0065707_10008840
200 Ga0070683_100002575
201 Ga0070670_100001542
202 Ga0070670_100006769
203 Ga0070670_100023601
204 Ga0068869_100000871
205 Ga0068869_100024283
206 Ga0070661_100043068
207 Ga0070674_100027104
208 Ga0070674_100093257
209 Ga0070673_100001103
210 Ga0070673_100020387
211 Ga0070673_100026912
212 Ga0070713_100011807
213 Ga0070705_100009786
214 Ga0070708_100138114
215 Ga0070662_100104127
216 Ga0068867_100032628
217 Ga0070698_100062058
218 Ga0070699_100009598
219 Ga0070699_100107381
220 Ga0070679_100033194
221 Ga0070684_100000152
222 Ga0070672_100039186
223 Ga0070672_100039906
224 Ga0070672_100067452
225 Ga0070686_100042678
226 Ga0070704_100037462
227 Ga0070704_100042849
228 Ga0070664_100000686
229 Ga0070664_100006959
230 Ga0070664_100051527
231 Ga0070664_100069469
232 Ga0068857_100008226
233 Ga0068861_100143450
234 Ga0068863_100053733
235 Ga0068862_100023879
236 Ga0081455_10047348
237 Ga0081539_10000084
238 Ga0075365_10000429
239 Ga0075364_10001809
240 Ga0097621_100009774
241 Ga0097621_100055431
242 Ga0097621_100143368
243 Ga0068871_100013281
244 Ga0068871_100059923
245 Ga0075428_100000377
246 Ga0075428_100001411
247 Ga0075428_100004044
248 Ga0075428_100058013
249 Ga0075430_100058579
250 Ga0075431_100016526
251 Ga0075431_100054428
252 Ga0075431_100132789
253 Ga0075434_100004041
254 Ga0075434_100033879
255 Ga0075434_100074455
256 Ga0075434_100152369
257 Ga0075429_100004661
258 Ga0068865_100020534
259 Ga0068865_100041660
260 Ga0068865_100048512
261 Ga0075436_100023070
262 Ga0075435_100003625
263 Ga0075435_100018748
264 Ga0075435_100125925
265 Ga0111539_10000560
266 Ga0111539_10019860
267 Ga0105245_10117183
268 Ga0114129_10000090
269 Ga0114129_10003850
270 Ga0114129_10006660
271 Ga0114129_10162701
272 Ga0105242_10032360
273 Ga0105242_10047075
274 Ga0105248_10007841
275 Ga0105248_10085810
276 Ga0105248_10167955
277 Ga0105249_10001338
278 Ga0157375_10148949
279 Ga0163163_10023862
280 Ga0163163_10136407
281 Ga0157377_10044254
282 Ga0157376_10005217
283 Ga0207642_10028890
284 Ga0207645_10002734
285 Ga0207645_10021781
286 Ga0207681_10029797
287 Ga0207650_10010025
288 Ga0207650_10024824
289 Ga0207669_10022707
290 Ga0207704_10018733
291 Ga0207704_10073194
292 Ga0207691_10016556
293 Ga0207691_10037896
294 Ga0207711_10056330
295 Ga0207711_10060635
296 Ga0207711_10101148
297 Ga0207689_10015731
298 Ga0207661_10002069
299 Ga0207679_10000849
300 Ga0207679_10013929
301 Ga0207679_10024098
302 Ga0207651_10002369
303 Ga0207651_10009597
304 Ga0207712_10005001
305 Ga0207640_10062350
306 Ga0207658_10073637
307 Ga0207677_10119755
308 Ga0207678_10012209
309 Ga0207708_10006807
310 Ga0207641_10040827
311 Ga0207648_10005485
312 Ga0207674_10017317
313 Ga0207698_10126350
314 Ga0207428_10015238
315 Ga0207428_10038287
316 Ga0268265_10106222
317 Ga0268264_10089872
318 Ga0307405_10017229
319 Ga0307413_10008386
320 Ga0307412_10009782
321 Ga0307412_10013708
322 Ga0307409_100026194
323 Ga0307409_100048883
324 Ga0307416_100017805
325 Ga0307416_100040755
326 Ga0307414_10108400
327 Ga0373930_0001261
328 Ga0373959_0001468
329 Ga0373928_0002243
330 Ga0373940_0000502
331 Ga0373949_0001047
332 Ga0373951_0000611
333 Ga0373952_0000348
334 Ga0373932_0000722
335 Ga0373941_0002054
336 Ga0373961_0001854
337 Ga0373937_0044494
338 Ga0436365_1777247
339 Ga0450923_002563
340 Ga0451577_0015025
341 Ga0451576_0023923
342 Ga0451576_0120305
343 Ga0466967_0177196
344 Ga0495588_0004102
345 Ga0496101_0000253
346 Ga0496104_0005090
347 Ga0496105_0015107
348 Ga0496106_0023208
349 Ga0496107_0054096
350 Ga0496108_0068735
351 Ga0496109_0001103
352 Ga0496110_0000490
353 Ga0496111_0001524
354 Ga0496112_0000535
355 Ga0496114_0001314
356 Ga0501034_0035726
357 Ga0501040_0010283
358 Ga0501048_0032303
359 Ga0501071_0004724
360 Ga0501075_0072077
361 Ga0501076_0003921
362 Ga0501077_0016629
363 Ga0501079_0027355
364 Ga0501045_0081640
365 nmdc:mga05p37_13843_c1
366 nmdc:mga05p37_3636_c1
367 nmdc:mga05p37_6916_c1
368 nmdc:mga05p37_96006_c1
369 nmdc:mga09592_46648_c1
370 nmdc:mga0qj67_49243_c1
371 nmdc:mga0qj67_52095_c1
372 nmdc:mga08y16_23542_c1
373 nmdc:mga08y16_4810_c1
374 nmdc:mga0n895_1096_c1
375 nmdc:mga0n895_76544_c1
376 nmdc:mga0n895_90121_c1
377 nmdc:mga0rr50_111863_c1
378 nmdc:mga0rr50_2069_c1
379 nmdc:mga0rr50_8261_c1
380 nmdc:mga08x19_6061_c1
381 nmdc:mga0a205_101798_c1
382 nmdc:mga0a205_3687_c1
383 Ga0495619_0054370
384 Ga0500651_0044518
385 Ga0500555_000510
386 Ga0500568_0005094
387 Ga0500616_0002603
388 Ga0500645_000103
389 Ga0501084_0023795
390 Ga0501082_0044043

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

392

455

0.94

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

497

629

0.84

Map