F300449

General Info

Members Datasets Scaffolds Average Seq Length
195 122 390 371

Family's Representative Sequence

Representative Sequence 3300042001|Ga0439441_006277|Ga0439441_006277_13_1302
Length 429
Sequence MGEDRMTDRDPDLGAPQVNASPPRSRLPSFFVASLILIVVAVLTGQLPAEALVTIFLFFLILGVTVVIHELGHFVAARLANVHVLEFGIGFPPRAKVLRDQGETVYTLNWLPIGGFVKLEGEDGDGADDPRSFAGQRLPIKLLILVAGVAMNLVLAFAIFTAITLTGDPATGIYIPYVDPASPAADAGLVVGDVIERVDGRAFGVFGPTSILQDLSSKAGRSVSLRVRHADGSVADLRATLRTLDELKANPDLGALGIGRKETKDPVTGEVIVAGIPLESRVTDDRITYPVGTAIRLGFDRTVTATQLIFAGVGELVSDLITRPTEPPAGAAGPVGIAIEIGNVFWTLGPIVTLYLAGILSANLAVVNILPFPPLDGGRMFVLLLKSVLGRRLSLRVERLTYVVGFALLFAFLIWVTAFDVIRQLDGTR

Samples

Sample ID Description Type Environment
1 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
58 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
69 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
116 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
119 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
120 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 13.85
Rhizosphere 86.15
Stem 0
Stem Tuber 0
Unclassified 2.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439441_006277 3300042001 Bacteria 1880
2 JGI25406J46586_10008095 3300003203 Bacteria 4773
3 Ga0070683_100090275 3300005329 Bacteria 2876
4 Ga0070690_100102528 3300005330 Bacteria 1899
5 Ga0070674_100254111 3300005356 Bacteria 1382
6 Ga0070703_10013023 3300005406 Bacteria 2358
7 Ga0070705_100020949 3300005440 Bacteria 3471
8 Ga0070705_100052723 3300005440 Bacteria 2378
9 Ga0070694_100009678 3300005444 Bacteria 5918
10 Ga0070694_100087571 3300005444 Bacteria 2179
11 Ga0070708_100002639 3300005445 Bacteria 13879
12 Ga0070708_100006225 3300005445 Bacteria 9484
13 Ga0070708_100007442 3300005445 Bacteria 8763
14 Ga0070708_100104635 3300005445 Bacteria 2596
15 Ga0070708_100223685 3300005445 Bacteria 1765
16 Ga0070663_100235926 3300005455 Bacteria 1442
17 Ga0070681_10235950 3300005458 Bacteria 1743
18 Ga0070706_100000374 3300005467 Bacteria 53751
19 Ga0070706_100205102 3300005467 Bacteria 1841
20 Ga0070707_100011682 3300005468 Bacteria 8194
21 Ga0070707_100017542 3300005468 Bacteria 6733
22 Ga0070707_100087690 3300005468 Bacteria 3010
23 Ga0070698_100002683 3300005471 Bacteria 19611
24 Ga0070698_100130234 3300005471 Bacteria 2471
25 Ga0070698_100139045 3300005471 Bacteria 2381
26 Ga0070698_100197076 3300005471 Bacteria 1950
27 Ga0070698_100226818 3300005471 Bacteria 1801
28 Ga0070698_100230658 3300005471 Unclassified 1784
29 Ga0070699_100006369 3300005518 Bacteria 10290
30 Ga0070699_100047353 3300005518 Bacteria 3720
31 Ga0070699_100232770 3300005518 Bacteria 1643
32 Ga0070699_100322273 3300005518 Unclassified 1389
33 Ga0070679_100107937 3300005530 Bacteria 2769
34 Ga0070684_100018879 3300005535 Bacteria 5692
35 Ga0070697_100005418 3300005536 Bacteria 9828
36 Ga0070697_100031651 3300005536 Bacteria 4256
37 Ga0070697_100070962 3300005536 Bacteria 2856
38 Ga0070697_100158512 3300005536 Bacteria 1911
39 Ga0070697_100371662 3300005536 Bacteria 1237
40 Ga0068853_100039485 3300005539 Bacteria 4026
41 Ga0070686_100027913 3300005544 Bacteria 3419
42 Ga0070686_100063909 3300005544 Bacteria 2386
43 Ga0070695_100040243 3300005545 Bacteria 2958
44 Ga0070695_100045660 3300005545 Bacteria 2793
45 Ga0070695_100156857 3300005545 Unclassified 1594
46 Ga0070696_100018197 3300005546 Bacteria 4746
47 Ga0070696_100044757 3300005546 Bacteria 3065
48 Ga0070696_100049210 3300005546 Bacteria 2927
49 Ga0070704_100012211 3300005549 Bacteria 5301
50 Ga0070702_100054893 3300005615 Bacteria 2294
51 Ga0068859_100245223 3300005617 Bacteria 1881
52 Ga0068858_100090747 3300005842 Bacteria 2844
53 Ga0068860_100204677 3300005843 Bacteria 1913
54 Ga0081539_10005916 3300005985 Bacteria 12085
55 Ga0081539_10007064 3300005985 Bacteria 10384
56 Ga0075428_100000944 3300006844 Bacteria 30761
57 Ga0075431_100070183 3300006847 Bacteria 3615
58 Ga0075433_10089961 3300006852 Bacteria 2713
59 Ga0075433_10185897 3300006852 Bacteria 1849
60 Ga0075433_10337078 3300006852 Unclassified 1333
61 Ga0075434_100097673 3300006871 Bacteria 2942
62 Ga0097620_100245225 3300006931 Bacteria 1881
63 Ga0075435_100111853 3300007076 Bacteria 2272
64 Ga0105245_10275395 3300009098 Bacteria 1643
65 Ga0105245_10307125 3300009098 Bacteria 1558
66 Ga0114129_10232195 3300009147 Bacteria 2484
67 Ga0114129_10286618 3300009147 Bacteria 2199
68 Ga0105248_10183107 3300009177 Bacteria 2360
69 Ga0105246_10044137 3300011119 Bacteria 3028
70 Ga0157375_10016594 3300013308 Bacteria 6622
71 Ga0163163_10101555 3300014325 Bacteria 2898
72 Ga0163163_10345352 3300014325 Bacteria 1544
73 Ga0157379_10024774 3300014968 Bacteria 5326
74 Ga0157379_10344724 3300014968 Bacteria 1363
75 Ga0207653_10022542 3300025885 Bacteria 2001
76 Ga0207645_10096791 3300025907 Bacteria 1902
77 Ga0207684_10005226 3300025910 Bacteria 12060
78 Ga0207684_10238951 3300025910 Bacteria 1567
79 Ga0207646_10002447 3300025922 Bacteria 21917
80 Ga0207646_10007625 3300025922 Bacteria 10956
81 Ga0207646_10014870 3300025922 Bacteria 7372
82 Ga0207646_10018553 3300025922 Bacteria 6487
83 Ga0207646_10036467 3300025922 Bacteria 4438
84 Ga0207646_10087150 3300025922 Bacteria 2794
85 Ga0207687_10081958 3300025927 Bacteria 2333
86 Ga0207669_10213552 3300025937 Bacteria 1410
87 Ga0207711_10198041 3300025941 Bacteria 1832
88 Ga0207661_10087168 3300025944 Bacteria 2592
89 Ga0207703_10020489 3300026035 Bacteria 5171
90 Ga0207683_10116389 3300026121 Bacteria 2396
91 Ga0268264_10172980 3300028381 Bacteria 1955
92 Ga0265326_10015330 3300028558 Bacteria 2225
93 Ga0265319_1008034 3300028563 Bacteria 4667
94 Ga0265319_1008181 3300028563 Bacteria 4610
95 Ga0265318_10013999 3300028577 Bacteria 3374
96 Ga0265318_10032233 3300028577 Bacteria 2029
97 Ga0265323_10016004 3300028653 Bacteria 2936
98 Ga0265324_10001795 3300029957 Bacteria 11703
99 Ga0265329_10012961 3300031242 Bacteria 2984
100 Ga0265316_10044325 3300031344 Bacteria 3538
101 Ga0307408_100064733 3300031548 Bacteria 2679
102 Ga0265314_10001648 3300031711 Bacteria 24435
103 Ga0316576_10022597 3300031727 Bacteria 4370
104 Ga0316578_10056475 3300031728 Bacteria 2306
105 Ga0307405_10068591 3300031731 Bacteria 2270
106 Ga0307409_100319570 3300031995 Bacteria 1452
107 Ga0307416_100001092 3300032002 Bacteria 14502
108 Ga0307416_100164399 3300032002 Bacteria 2056
109 Ga0307415_100046914 3300032126 Bacteria 2905
110 Ga0373943_0036681 3300035170 Bacteria 2349
111 Ga0373946_0100040 3300035171 Bacteria 1299
112 Ga0373947_0029226 3300035725 Bacteria 3234
113 Ga0373937_0364430 3300036401 Bacteria 1370
114 Ga0316584_0099294 3300036712 Bacteria 2180
115 Ga0451577_0049905 3300042876 Bacteria 3736
116 Ga0451577_0057110 3300042876 Bacteria 3480
117 Ga0451577_0270891 3300042876 Bacteria 1538
118 Ga0453683_0044714 3300044673 Bacteria 2777
119 Ga0451576_0038137 3300045051 Bacteria 5086
120 Ga0466967_0369131 3300045976 Unclassified 1392
121 Ga0495629_0161046 3300046459 Bacteria 1559
122 Ga0495664_0148117 3300046477 Bacteria 1424
123 Ga0495674_0079977 3300047319 Bacteria 2806
124 Ga0495680_0117174 3300047322 Bacteria 1969
125 Ga0495684_0137024 3300047471 Bacteria 1837
126 Ga0496101_0078689 3300048904 Bacteria 2433
127 Ga0496102_0041916 3300048905 Bacteria 4147
128 Ga0496102_0235035 3300048905 Bacteria 1728
129 Ga0496103_0023230 3300048906 Bacteria 3738
130 Ga0496104_0011043 3300048907 Bacteria 8080
131 Ga0496104_0102062 3300048907 Bacteria 2747
132 Ga0496104_0326762 3300048907 Bacteria 1447
133 Ga0496105_0000468 3300048908 Bacteria 26573
134 Ga0496106_0084462 3300048909 Bacteria 2443
135 Ga0496106_0113665 3300048909 Bacteria 2111
136 Ga0496107_0026123 3300048910 Bacteria 4139
137 Ga0496107_0129807 3300048910 Bacteria 1860
138 Ga0496108_0003060 3300048911 Bacteria 13440
139 Ga0496108_0046717 3300048911 Bacteria 3618
140 Ga0496109_0031285 3300048912 Bacteria 4775
141 Ga0496109_0047345 3300048912 Bacteria 3909
142 Ga0496109_0076724 3300048912 Bacteria 3074
143 Ga0496110_0115949 3300048913 Bacteria 2411
144 Ga0496111_0003711 3300048914 Bacteria 9498
145 Ga0496111_0064566 3300048914 Bacteria 2656
146 Ga0496112_0000010 3300048915 Bacteria 245046
147 Ga0496112_0005565 3300048915 Bacteria 10920
148 Ga0496112_0036774 3300048915 Bacteria 4777
149 Ga0496112_0220927 3300048915 Bacteria 1851
150 Ga0496113_0005088 3300048916 Bacteria 8167
151 Ga0496113_0057059 3300048916 Bacteria 2933
152 Ga0496114_0038979 3300048917 Bacteria 3932
153 Ga0501036_0196036 3300049572 Bacteria 1699
154 Ga0501036_0283546 3300049572 Bacteria 1386
155 Ga0501039_0075388 3300049575 Bacteria 2622
156 Ga0501040_0065727 3300049576 Bacteria 2498
157 Ga0501041_0014602 3300049577 Bacteria 4663
158 Ga0501042_0036177 3300049578 Bacteria 3503
159 Ga0501046_0127522 3300049580 Bacteria 1932
160 Ga0501046_0136226 3300049580 Bacteria 1860
161 Ga0501067_0011070 3300049583 Bacteria 4991
162 Ga0501067_0072326 3300049583 Bacteria 1910
163 Ga0501067_0083668 3300049583 Bacteria 1770
164 Ga0501068_0045235 3300049584 Bacteria 2652
165 Ga0501069_0119961 3300049585 Bacteria 1502
166 Ga0501069_0194959 3300049585 Bacteria 1173
167 Ga0501071_0016664 3300049587 Bacteria 5055
168 Ga0501071_0116623 3300049587 Bacteria 1977
169 Ga0501072_0003299 3300049588 Bacteria 12143
170 Ga0501072_0069605 3300049588 Bacteria 2779
171 Ga0501075_0027844 3300049591 Bacteria 4167
172 Ga0501075_0111569 3300049591 Bacteria 2079
173 Ga0501076_0012453 3300049592 Bacteria 6359
174 Ga0501076_0042980 3300049592 Bacteria 3560
175 Ga0501079_0123685 3300049741 Bacteria 2012
176 Ga0501080_0101800 3300049742 Bacteria 2665
177 Ga0501045_0086178 3300049824 Bacteria 2318
178 Ga0501045_0148881 3300049824 Bacteria 1741
179 nmdc:mga05p37_179649_c1 3300050507 Bacteria 2575
180 nmdc:mga05p37_398439_c1 3300050507 Bacteria 1608
181 nmdc:mga05p37_624_c1 3300050507 Bacteria 39170
182 nmdc:mga0n895_149389_c1 3300050512 Bacteria 2366
183 nmdc:mga0a205_240958_c1 3300050515 Bacteria 1689
184 nmdc:mga0a205_375216_c1 3300050515 Bacteria 1288
185 nmdc:mga0a205_97897_c1 3300050515 Bacteria 2832
186 Ga0495612_0008014 3300053078 Bacteria 4300
187 Ga0495619_0239124 3300053085 Bacteria 1258
188 Ga0501084_0160400 3300054114 Bacteria 1897
189 Ga0501084_0206936 3300054114 Bacteria 1656
190 Ga0590071_000952 3300059421 Bacteria 8005
191 Ga0590074_004101 3300059423 Bacteria 2408
192 Ga0590075_003647 3300059424 Bacteria 3652
193 Ga0501082_0041187 3300060353 Bacteria 3983
194 Ga0501082_0130002 3300060353 Bacteria 2185
195 Ga0530510_0005585 3300061734 Bacteria 8714
196 Ga0439441_006277
197 JGI25406J46586_10008095
198 Ga0070683_100090275
199 Ga0070690_100102528
200 Ga0070674_100254111
201 Ga0070703_10013023
202 Ga0070705_100020949
203 Ga0070705_100052723
204 Ga0070694_100009678
205 Ga0070694_100087571
206 Ga0070708_100002639
207 Ga0070708_100006225
208 Ga0070708_100007442
209 Ga0070708_100104635
210 Ga0070708_100223685
211 Ga0070663_100235926
212 Ga0070681_10235950
213 Ga0070706_100000374
214 Ga0070706_100205102
215 Ga0070707_100011682
216 Ga0070707_100017542
217 Ga0070707_100087690
218 Ga0070698_100002683
219 Ga0070698_100130234
220 Ga0070698_100139045
221 Ga0070698_100197076
222 Ga0070698_100226818
223 Ga0070698_100230658
224 Ga0070699_100006369
225 Ga0070699_100047353
226 Ga0070699_100232770
227 Ga0070699_100322273
228 Ga0070679_100107937
229 Ga0070684_100018879
230 Ga0070697_100005418
231 Ga0070697_100031651
232 Ga0070697_100070962
233 Ga0070697_100158512
234 Ga0070697_100371662
235 Ga0068853_100039485
236 Ga0070686_100027913
237 Ga0070686_100063909
238 Ga0070695_100040243
239 Ga0070695_100045660
240 Ga0070695_100156857
241 Ga0070696_100018197
242 Ga0070696_100044757
243 Ga0070696_100049210
244 Ga0070704_100012211
245 Ga0070702_100054893
246 Ga0068859_100245223
247 Ga0068858_100090747
248 Ga0068860_100204677
249 Ga0081539_10005916
250 Ga0081539_10007064
251 Ga0075428_100000944
252 Ga0075431_100070183
253 Ga0075433_10089961
254 Ga0075433_10185897
255 Ga0075433_10337078
256 Ga0075434_100097673
257 Ga0097620_100245225
258 Ga0075435_100111853
259 Ga0105245_10275395
260 Ga0105245_10307125
261 Ga0114129_10232195
262 Ga0114129_10286618
263 Ga0105248_10183107
264 Ga0105246_10044137
265 Ga0157375_10016594
266 Ga0163163_10101555
267 Ga0163163_10345352
268 Ga0157379_10024774
269 Ga0157379_10344724
270 Ga0207653_10022542
271 Ga0207645_10096791
272 Ga0207684_10005226
273 Ga0207684_10238951
274 Ga0207646_10002447
275 Ga0207646_10007625
276 Ga0207646_10014870
277 Ga0207646_10018553
278 Ga0207646_10036467
279 Ga0207646_10087150
280 Ga0207687_10081958
281 Ga0207669_10213552
282 Ga0207711_10198041
283 Ga0207661_10087168
284 Ga0207703_10020489
285 Ga0207683_10116389
286 Ga0268264_10172980
287 Ga0265326_10015330
288 Ga0265319_1008034
289 Ga0265319_1008181
290 Ga0265318_10013999
291 Ga0265318_10032233
292 Ga0265323_10016004
293 Ga0265324_10001795
294 Ga0265329_10012961
295 Ga0265316_10044325
296 Ga0307408_100064733
297 Ga0265314_10001648
298 Ga0316576_10022597
299 Ga0316578_10056475
300 Ga0307405_10068591
301 Ga0307409_100319570
302 Ga0307416_100001092
303 Ga0307416_100164399
304 Ga0307415_100046914
305 Ga0373943_0036681
306 Ga0373946_0100040
307 Ga0373947_0029226
308 Ga0373937_0364430
309 Ga0316584_0099294
310 Ga0451577_0049905
311 Ga0451577_0057110
312 Ga0451577_0270891
313 Ga0453683_0044714
314 Ga0451576_0038137
315 Ga0466967_0369131
316 Ga0495629_0161046
317 Ga0495664_0148117
318 Ga0495674_0079977
319 Ga0495680_0117174
320 Ga0495684_0137024
321 Ga0496101_0078689
322 Ga0496102_0041916
323 Ga0496102_0235035
324 Ga0496103_0023230
325 Ga0496104_0011043
326 Ga0496104_0102062
327 Ga0496104_0326762
328 Ga0496105_0000468
329 Ga0496106_0084462
330 Ga0496106_0113665
331 Ga0496107_0026123
332 Ga0496107_0129807
333 Ga0496108_0003060
334 Ga0496108_0046717
335 Ga0496109_0031285
336 Ga0496109_0047345
337 Ga0496109_0076724
338 Ga0496110_0115949
339 Ga0496111_0003711
340 Ga0496111_0064566
341 Ga0496112_0000010
342 Ga0496112_0005565
343 Ga0496112_0036774
344 Ga0496112_0220927
345 Ga0496113_0005088
346 Ga0496113_0057059
347 Ga0496114_0038979
348 Ga0501036_0196036
349 Ga0501036_0283546
350 Ga0501039_0075388
351 Ga0501040_0065727
352 Ga0501041_0014602
353 Ga0501042_0036177
354 Ga0501046_0127522
355 Ga0501046_0136226
356 Ga0501067_0011070
357 Ga0501067_0072326
358 Ga0501067_0083668
359 Ga0501068_0045235
360 Ga0501069_0119961
361 Ga0501069_0194959
362 Ga0501071_0016664
363 Ga0501071_0116623
364 Ga0501072_0003299
365 Ga0501072_0069605
366 Ga0501075_0027844
367 Ga0501075_0111569
368 Ga0501076_0012453
369 Ga0501076_0042980
370 Ga0501079_0123685
371 Ga0501080_0101800
372 Ga0501045_0086178
373 Ga0501045_0148881
374 nmdc:mga05p37_179649_c1
375 nmdc:mga05p37_398439_c1
376 nmdc:mga05p37_624_c1
377 nmdc:mga0n895_149389_c1
378 nmdc:mga0a205_240958_c1
379 nmdc:mga0a205_375216_c1
380 nmdc:mga0a205_97897_c1
381 Ga0495612_0008014
382 Ga0495619_0239124
383 Ga0501084_0160400
384 Ga0501084_0206936
385 Ga0590071_000952
386 Ga0590074_004101
387 Ga0590075_003647
388 Ga0501082_0041187
389 Ga0501082_0130002
390 Ga0530510_0005585

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

57

412

0.96

PF17820

PDZ_6

PDZ domain

174

229

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w70-assembly1.cif.gz_B crystal structure of the pdz-c domain fragment of kangiella koreensis rsep orthologue 0.8429 128 217
5t63-assembly1.cif.gz_A the hhoa protease from synechocystis sp. pcc 6803 0.8387 128 203
3gdv-assembly1.cif.gz_A crystal structure of degs h198p/d320a mutant modified by dfp and in complex with yqf peptide 0.829 128 202
5gnd-assembly1.cif.gz_A structure of deg protease hhoa from synechocystis sp. pcc 6803 0.8286 128 203
3i1e-assembly2.cif.gz_B crystal structure of the pdz domain of the sdrc-like protein (lin2157) from listeria innocua, northeast structural genomics consortium target lkr136c 0.8253 128 217
ID Description Score Start End Superfamily
af_Q9VFJ3_320_421_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8791 128 202 2.30.42.10
af_F1QL69_2_87_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8551 128 200 2.30.42.10
5t63A02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8387 128 203 2.30.42.10
af_Q3E6S8_328_426_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8311 128 202 2.30.42.10
3wkmB02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8291 130 217 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A1F8S9G5-F1-model_v4 PDZ domain-containing protein 0.9151 1 371 GO:0004222
GO:0006508
GO:0016020
AF-A0A1F8S9G5-F1-model_v4 PDZ domain-containing protein 0.9007 1 371 GO:0004222
GO:0006508
GO:0016020
AF-A0A1F6G403-F1-model_v4 Peptidase M50 domain-containing protein 0.8478 10 369 GO:0004222
GO:0006508
GO:0016020
AF-A0A1F6G403-F1-model_v4 Peptidase M50 domain-containing protein 0.8325 10 369 GO:0004222
GO:0006508
GO:0016020
AF-A0A7X5E3L4-F1-model_v4 RIP metalloprotease 0.8048 6 373 GO:0004222
GO:0006508
GO:0016020

Map