F299857

General Info

Members Datasets Scaffolds Average Seq Length
195 138 195 509

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100036016|Ga0068863_1000360162
Length 519
Sequence MSKPALVFIGFMGAGKSTALAAAQRAGLETTEIDAVMESEFGMPIAQAFEQHGEEGFREREAEVVGELLERADGGAIALGGGSILSERIRAALERHVVVWLRVDAQESWRRIAHSDRPLATNAEDVARLMAVREPLYEELADAVIPAGDRAIVSRALPALIALLDLPAGTKMLWAASASGEYPILVGPGLLDALAGPDGGPGWWPAPGRRFGIADATTASLYAERLQPLAAGAEIPPGEASKTMAVAEEALRELARAGMTKEDHVVALGGGVVGDLAGLCAHLYQRGVPVVQVPTTLVAQVDSAYGGKTGVDLPEGKNYAGAYHLPAAVISDTATLTTLPPEELAAGFVEVLKTGLLAGGALWERVRGLDSLEAPAALADVVFACARFKCEVVAADERDGGLRHMLNLGHTVGHAIEAATGYRRFRHGEAVGIGLLAALRLSDADELRAEVERSLRRHQLPVRLDREISVDAILDALQRDKKRTAAGVGFVLLAEPGEPRVGQLVDPARVRGAVEELIG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
65 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
94 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
99 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
134 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.03
Nodule 0
Rhizoplane 15.38
Rhizosphere 77.44
Stem 0
Stem Tuber 0
Unclassified 6.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006242 3300001979 Bacteria 4957
2 Ga0070683_100002036 3300005329 Bacteria 15916
3 Ga0070683_100216735 3300005329 Bacteria 1819
4 Ga0070677_10000044 3300005333 Bacteria 39119
5 Ga0070682_100000078 3300005337 Bacteria 87953
6 Ga0068868_100000453 3300005338 Bacteria 27329
7 Ga0070691_10000002 3300005341 Bacteria 90686
8 Ga0070691_10005361 3300005341 Bacteria 5833
9 Ga0070674_100000007 3300005356 Bacteria 145531
10 Ga0070667_100034226 3300005367 Bacteria 4249
11 Ga0070700_100095218 3300005441 Bacteria 1951
12 Ga0070662_100000002 3300005457 Bacteria 253208
13 Ga0070679_100000129 3300005530 Bacteria 60559
14 Ga0070679_100004961 3300005530 Bacteria 12284
15 Ga0070684_100008415 3300005535 Bacteria 8062
16 Ga0068853_100029866 3300005539 Bacteria 4599
17 Ga0070693_100005378 3300005547 Bacteria 6144
18 Ga0070665_100000141 3300005548 Bacteria 135473
19 Ga0068854_100109541 3300005578 Bacteria 2081
20 Ga0068856_100004779 3300005614 Bacteria 13422
21 Ga0068866_10000003 3300005718 Bacteria 281675
22 Ga0068851_10042928 3300005834 Bacteria 2278
23 Ga0068863_100036016 3300005841 Bacteria 4713
24 Ga0068858_100001794 3300005842 Bacteria 21900
25 Ga0068860_100021542 3300005843 Bacteria 6241
26 Ga0081540_1000628 3300005983 Bacteria 33596
27 Ga0070715_10000029 3300006163 Bacteria 88994
28 Ga0070712_100000978 3300006175 Bacteria 17209
29 Ga0075433_10000002 3300006852 Bacteria 92986
30 Ga0105240_10205356 3300009093 Bacteria 2306
31 Ga0105245_10000026 3300009098 Bacteria 163660
32 Ga0105245_10000315 3300009098 Bacteria 46041
33 Ga0105245_10001571 3300009098 Bacteria 20730
34 Ga0105245_10006909 3300009098 Bacteria 9952
35 Ga0105247_10000347 3300009101 Bacteria 40377
36 Ga0105243_10065287 3300009148 Bacteria 2923
37 Ga0105242_10000059 3300009176 Bacteria 75563
38 Ga0105242_10000699 3300009176 Bacteria 26334
39 Ga0105242_10011006 3300009176 Bacteria 6948
40 Ga0105242_10052181 3300009176 Bacteria 3336
41 Ga0105239_10211176 3300010375 Bacteria 2176
42 Ga0157370_10005610 3300013104 Bacteria 14050
43 Ga0157378_10165706 3300013297 Bacteria 2070
44 Ga0157375_10000171 3300013308 Bacteria 61181
45 Ga0157379_10000990 3300014968 Bacteria 23056
46 Ga0157376_10006578 3300014969 Bacteria 8225
47 Ga0157376_10079878 3300014969 Bacteria 2805
48 Ga0207656_10001014 3300025321 Bacteria 9146
49 Ga0207682_10000497 3300025893 Bacteria 18104
50 Ga0207642_10000002 3300025899 Bacteria 658166
51 Ga0207642_10000219 3300025899 Bacteria 16889
52 Ga0207710_10000631 3300025900 Bacteria 20232
53 Ga0207685_10000031 3300025905 Bacteria 77451
54 Ga0207693_10003006 3300025915 Bacteria 14589
55 Ga0207652_10000211 3300025921 Bacteria 61784
56 Ga0207652_10002784 3300025921 Bacteria 14695
57 Ga0207687_10000017 3300025927 Bacteria 237310
58 Ga0207687_10000112 3300025927 Bacteria 58074
59 Ga0207687_10009791 3300025927 Bacteria 6272
60 Ga0207706_10000001 3300025933 Bacteria 423014
61 Ga0207686_10000116 3300025934 Bacteria 64638
62 Ga0207686_10010036 3300025934 Bacteria 5151
63 Ga0207686_10030325 3300025934 Bacteria 3200
64 Ga0207709_10034403 3300025935 Bacteria 2986
65 Ga0207669_10000001 3300025937 Bacteria 377747
66 Ga0207669_10000003 3300025937 Bacteria 252239
67 Ga0207704_10000088 3300025938 Bacteria 53926
68 Ga0207661_10057791 3300025944 Bacteria 3121
69 Ga0207661_10147770 3300025944 Bacteria 2029
70 Ga0207712_10000052 3300025961 Bacteria 152874
71 Ga0207640_10080935 3300025981 Bacteria 2219
72 Ga0207658_10004652 3300025986 Bacteria 9517
73 Ga0207677_10000203 3300026023 Bacteria 47885
74 Ga0207703_10000018 3300026035 Bacteria 271377
75 Ga0207703_10000061 3300026035 Bacteria 132671
76 Ga0207703_10101791 3300026035 Bacteria 2436
77 Ga0207639_10021823 3300026041 Bacteria 4603
78 Ga0207678_10000556 3300026067 Bacteria 34074
79 Ga0207708_10084523 3300026075 Bacteria 2440
80 Ga0207702_10002397 3300026078 Bacteria 17842
81 Ga0207641_10022213 3300026088 Bacteria 5222
82 Ga0268266_10000056 3300028379 Bacteria 289176
83 Ga0268266_10000160 3300028379 Bacteria 125999
84 Ga0268264_10015533 3300028381 Bacteria 6242
85 Ga0265319_1000014 3300028563 Bacteria 177623
86 Ga0265336_10022789 3300028666 Bacteria 1992
87 Ga0265338_10000244 3300028800 Bacteria 100528
88 Ga0466963_0000004 3300044694 Bacteria 102526
89 Ga0466963_0001266 3300044694 Bacteria 13403
90 Ga0466957_0006400 3300044842 Bacteria 6651
91 Ga0466957_0066197 3300044842 Bacteria 2227
92 Ga0466967_0000001 3300045976 Bacteria 229823
93 Ga0495592_0000078 3300046454 Bacteria 85591
94 Ga0495603_0001813 3300046455 Bacteria 12609
95 Ga0495629_0001620 3300046459 Bacteria 17689
96 Ga0495629_0001644 3300046459 Bacteria 17549
97 Ga0495641_0000005 3300046461 Bacteria 206626
98 Ga0495641_0033658 3300046461 Bacteria 2430
99 Ga0495662_0004081 3300046476 Bacteria 7352
100 Ga0495594_0000045 3300046499 Bacteria 54326
101 Ga0495608_0000007 3300046511 Bacteria 313495
102 Ga0495618_0078921 3300046514 Bacteria 2099
103 Ga0495628_0000808 3300046516 Bacteria 28939
104 Ga0495628_0099232 3300046516 Bacteria 2249
105 Ga0495644_0000139 3300046523 Bacteria 35023
106 Ga0495652_0000010 3300046529 Bacteria 261584
107 Ga0495652_0004565 3300046529 Bacteria 13204
108 Ga0495586_0000959 3300046535 Bacteria 16343
109 Ga0495587_0015176 3300046536 Bacteria 4814
110 Ga0495645_0117350 3300046543 Bacteria 1877
111 Ga0495622_0001452 3300046557 Bacteria 11937
112 Ga0495656_0000931 3300046615 Bacteria 9472
113 Ga0495635_0003412 3300046663 Bacteria 10984
114 Ga0495657_0000001 3300046675 Bacteria 445641
115 Ga0495599_0004033 3300046678 Bacteria 8644
116 Ga0495647_0000678 3300046681 Bacteria 10152
117 Ga0495658_0000370 3300046683 Bacteria 25240
118 Ga0495669_0000051 3300046684 Bacteria 80128
119 Ga0495613_0000005 3300046689 Bacteria 222558
120 Ga0495649_0002413 3300046694 Bacteria 13181
121 Ga0495604_0000067 3300047317 Bacteria 90345
122 Ga0495676_0000186 3300047321 Bacteria 49054
123 Ga0495680_0000114 3300047322 Bacteria 76486
124 Ga0495680_0000267 3300047322 Bacteria 57953
125 Ga0495675_0000017 3300047444 Bacteria 123394
126 Ga0495679_009781 3300047446 Bacteria 3811
127 Ga0495602_0000775 3300048088 Bacteria 30490
128 Ga0495602_0052816 3300048088 Bacteria 3606
129 Ga0495602_0106595 3300048088 Bacteria 2287
130 Ga0496100_0000001 3300048903 Bacteria 530179
131 Ga0496100_0000061 3300048903 Bacteria 63790
132 Ga0496101_0000004 3300048904 Bacteria 331599
133 Ga0496101_0000141 3300048904 Bacteria 63790
134 Ga0496102_0001710 3300048905 Bacteria 19219
135 Ga0496104_0000025 3300048907 Bacteria 228519
136 Ga0496104_0000133 3300048907 Bacteria 69099
137 Ga0496104_0075427 3300048907 Bacteria 3211
138 Ga0496105_0000023 3300048908 Bacteria 156126
139 Ga0496105_0000187 3300048908 Bacteria 41418
140 Ga0496105_0034548 3300048908 Bacteria 4159
141 Ga0496106_0000056 3300048909 Bacteria 90682
142 Ga0496106_0000094 3300048909 Bacteria 67511
143 Ga0496107_0000005 3300048910 Bacteria 281747
144 Ga0496107_0000045 3300048910 Bacteria 67420
145 Ga0496108_0000063 3300048911 Bacteria 118950
146 Ga0496108_0000164 3300048911 Bacteria 62669
147 Ga0496109_0000012 3300048912 Bacteria 229699
148 Ga0496109_0000180 3300048912 Bacteria 62669
149 Ga0496110_0000114 3300048913 Bacteria 44437
150 Ga0496110_0045145 3300048913 Bacteria 3850
151 Ga0496110_0057447 3300048913 Bacteria 3425
152 Ga0496111_0000008 3300048914 Bacteria 96148
153 Ga0496111_0011403 3300048914 Bacteria 5985
154 Ga0496112_0001447 3300048915 Bacteria 18224
155 Ga0496113_0000099 3300048916 Bacteria 36270
156 Ga0496113_0030813 3300048916 Bacteria 3886
157 Ga0496114_0000171 3300048917 Bacteria 46036
158 Ga0496115_0000011 3300048918 Bacteria 222529
159 Ga0496115_0001687 3300048918 Bacteria 15870
160 Ga0496117_0006020 3300048920 Bacteria 12473
161 Ga0496118_0000790 3300048921 Bacteria 50676
162 Ga0496119_0002341 3300048922 Bacteria 20874
163 Ga0496119_0005130 3300048922 Bacteria 12695
164 Ga0496120_0035207 3300048923 Bacteria 2993
165 Ga0496121_0093952 3300048924 Bacteria 2334
166 Ga0496124_0055758 3300048927 Bacteria 3338
167 Ga0496125_0044566 3300048928 Bacteria 3749
168 Ga0496125_0056470 3300048928 Bacteria 3188
169 Ga0496125_0057982 3300048928 Bacteria 3131
170 Ga0496126_0018950 3300048929 Bacteria 6798
171 Ga0496126_0122410 3300048929 Bacteria 2255
172 Ga0501042_0015204 3300049578 Bacteria 5266
173 Ga0501069_0022702 3300049585 Bacteria 3416
174 Ga0501070_0076363 3300049586 Bacteria 2773
175 Ga0501071_0091391 3300049587 Bacteria 2236
176 Ga0501081_0033039 3300049743 Bacteria 3513
177 Ga0501083_0015090 3300049744 Bacteria 5408
178 Ga0501083_0080441 3300049744 Bacteria 2160
179 Ga0501044_0101075 3300049823 Bacteria 2901
180 Ga0501045_0124734 3300049824 Bacteria 1913
181 nmdc:mga0a205_13_c1 3300050515 Bacteria 111131
182 Ga0495601_0000071 3300053077 Bacteria 56206
183 Ga0495601_0009380 3300053077 Bacteria 5788
184 Ga0495601_0061438 3300053077 Bacteria 2385
185 Ga0495612_0000110 3300053078 Bacteria 34644
186 Ga0495612_0000414 3300053078 Bacteria 17054
187 Ga0495595_0000002 3300053084 Bacteria 445641
188 Ga0495619_0000008 3300053085 Bacteria 305999
189 Ga0495619_0000053 3300053085 Bacteria 98761
190 Ga0495619_0001401 3300053085 Bacteria 15847
191 Ga0495619_0003148 3300053085 Bacteria 10702
192 Ga0495619_0007715 3300053085 Bacteria 6811
193 Ga0500641_0013123 3300053096 Bacteria 3041
194 Ga0500658_0047617 3300053134 Bacteria 1741
195 Ga0501082_0272514 3300060353 Bacteria 1473

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_0272514 Ga0501082_0272514_26_1357 443
2 3300048913 Ga0496110_0057447 Ga0496110_0057447_1985_3409 474
3 3300044694 Ga0466963_0000004 Ga0466963_0000004_45709_47265 476
4 3300046516 Ga0495628_0099232 Ga0495628_0099232_691_2142 483
5 3300048907 Ga0496104_0000133 Ga0496104_0000133_22081_23586 489
6 3300048908 Ga0496105_0000187 Ga0496105_0000187_17673_19178 489
7 3300046459 Ga0495629_0001644 Ga0495629_0001644_3772_5307 492
8 3300048911 Ga0496108_0000164 Ga0496108_0000164_13964_15460 498
9 3300048912 Ga0496109_0000180 Ga0496109_0000180_47210_48706 498
10 3300048928 Ga0496125_0056470 Ga0496125_0056470_1124_2620 498
11 3300005333 Ga0070677_10000044 Ga0070677_1000004435 499
12 3300005356 Ga0070674_100000007 Ga0070674_10000000776 499
13 3300009098 Ga0105245_10000315 Ga0105245_1000031531 499
14 3300014968 Ga0157379_10000990 Ga0157379_1000099024 499
15 3300025961 Ga0207712_10000052 Ga0207712_1000005216 499
16 3300046514 Ga0495618_0078921 Ga0495618_0078921_376_1881 499
17 3300046678 Ga0495599_0004033 Ga0495599_0004033_2836_4335 499
18 3300046684 Ga0495669_0000051 Ga0495669_0000051_19655_21154 499
19 3300048903 Ga0496100_0000001 Ga0496100_0000001_305949_307451 499
20 3300048904 Ga0496101_0000004 Ga0496101_0000004_107301_108803 499
21 3300048907 Ga0496104_0000025 Ga0496104_0000025_105752_107251 499
22 3300048908 Ga0496105_0000023 Ga0496105_0000023_105752_107251 499
23 3300048909 Ga0496106_0000056 Ga0496106_0000056_28274_29776 499
24 3300048910 Ga0496107_0000005 Ga0496107_0000005_222797_224299 499
25 3300048916 Ga0496113_0030813 Ga0496113_0030813_471_1988 499
26 3300053077 Ga0495601_0009380 Ga0495601_0009380_3782_5287 499
27 3300053085 Ga0495619_0007715 Ga0495619_0007715_905_2404 499
28 3300005548 Ga0070665_100000141 Ga0070665_10000014150 508
29 3300009098 Ga0105245_10000026 Ga0105245_1000002689 508
30 3300009148 Ga0105243_10065287 Ga0105243_100652872 508
31 3300009176 Ga0105242_10011006 Ga0105242_100110064 508
32 3300014969 Ga0157376_10079878 Ga0157376_100798782 508
33 3300025899 Ga0207642_10000219 Ga0207642_1000021917 508
34 3300025927 Ga0207687_10000017 Ga0207687_1000001793 508
35 3300025935 Ga0207709_10034403 Ga0207709_100344032 508
36 3300025937 Ga0207669_10000003 Ga0207669_1000000337 508
37 3300025938 Ga0207704_10000088 Ga0207704_100000888 508
38 3300026035 Ga0207703_10000061 Ga0207703_1000006120 508
39 3300028379 Ga0268266_10000056 Ga0268266_1000005659 508
40 3300044694 Ga0466963_0001266 Ga0466963_0001266_3187_4713 508
41 3300044842 Ga0466957_0006400 Ga0466957_0006400_719_2245 508
42 3300046683 Ga0495658_0000370 Ga0495658_0000370_20832_22358 508
43 3300048911 Ga0496108_0000063 Ga0496108_0000063_6308_7834 508
44 3300048912 Ga0496109_0000012 Ga0496109_0000012_104913_106439 508
45 3300048913 Ga0496110_0000114 Ga0496110_0000114_28902_30428 508
46 3300048914 Ga0496111_0000008 Ga0496111_0000008_50592_52118 508
47 3300048915 Ga0496112_0001447 Ga0496112_0001447_16241_17767 508
48 3300048916 Ga0496113_0000099 Ga0496113_0000099_16695_18221 508
49 3300005329 Ga0070683_100216735 Ga0070683_1002167352 509
50 3300005337 Ga0070682_100000078 Ga0070682_10000007848 509
51 3300005338 Ga0068868_100000453 Ga0068868_10000045326 509
52 3300005341 Ga0070691_10000002 Ga0070691_1000000232 509
53 3300005367 Ga0070667_100034226 Ga0070667_1000342263 509
54 3300005535 Ga0070684_100008415 Ga0070684_1000084158 509
55 3300005539 Ga0068853_100029866 Ga0068853_1000298662 509
56 3300005547 Ga0070693_100005378 Ga0070693_1000053782 509
57 3300005578 Ga0068854_100109541 Ga0068854_1001095412 509
58 3300005614 Ga0068856_100004779 Ga0068856_1000047797 509
59 3300005718 Ga0068866_10000003 Ga0068866_10000003217 509
60 3300005834 Ga0068851_10042928 Ga0068851_100429282 509
61 3300005843 Ga0068860_100021542 Ga0068860_1000215425 509
62 3300006163 Ga0070715_10000029 Ga0070715_1000002974 509
63 3300009098 Ga0105245_10001571 Ga0105245_1000157111 509
64 3300009098 Ga0105245_10006909 Ga0105245_100069094 509
65 3300010375 Ga0105239_10211176 Ga0105239_102111761 509
66 3300025321 Ga0207656_10001014 Ga0207656_100010142 509
67 3300025893 Ga0207682_10000497 Ga0207682_1000049717 509
68 3300025899 Ga0207642_10000002 Ga0207642_10000002468 509
69 3300025905 Ga0207685_10000031 Ga0207685_1000003116 509
70 3300025927 Ga0207687_10000112 Ga0207687_1000011241 509
71 3300025927 Ga0207687_10009791 Ga0207687_100097913 509
72 3300025937 Ga0207669_10000001 Ga0207669_1000000174 509
73 3300025944 Ga0207661_10057791 Ga0207661_100577913 509
74 3300025944 Ga0207661_10147770 Ga0207661_101477702 509
75 3300025981 Ga0207640_10080935 Ga0207640_100809352 509
76 3300025986 Ga0207658_10004652 Ga0207658_100046525 509
77 3300026023 Ga0207677_10000203 Ga0207677_1000020316 509
78 3300026035 Ga0207703_10101791 Ga0207703_101017913 509
79 3300026041 Ga0207639_10021823 Ga0207639_100218233 509
80 3300026078 Ga0207702_10002397 Ga0207702_1000239710 509
81 3300028379 Ga0268266_10000160 Ga0268266_1000016046 509
82 3300028381 Ga0268264_10015533 Ga0268264_100155335 509
83 3300045976 Ga0466967_0000001 Ga0466967_0000001_200280_201809 509
84 3300046454 Ga0495592_0000078 Ga0495592_0000078_41217_42746 509
85 3300046461 Ga0495641_0000005 Ga0495641_0000005_62182_63726 509
86 3300046461 Ga0495641_0033658 Ga0495641_0033658_99_1628 509
87 3300046476 Ga0495662_0004081 Ga0495662_0004081_1230_2768 509
88 3300046516 Ga0495628_0000808 Ga0495628_0000808_15561_17090 509
89 3300046523 Ga0495644_0000139 Ga0495644_0000139_10537_12066 509
90 3300046529 Ga0495652_0004565 Ga0495652_0004565_6768_8324 509
91 3300046535 Ga0495586_0000959 Ga0495586_0000959_9353_10882 509
92 3300046543 Ga0495645_0117350 Ga0495645_0117350_57_1586 509
93 3300046663 Ga0495635_0003412 Ga0495635_0003412_4516_6048 509
94 3300046681 Ga0495647_0000678 Ga0495647_0000678_1790_3319 509
95 3300046689 Ga0495613_0000005 Ga0495613_0000005_178692_180221 509
96 3300046694 Ga0495649_0002413 Ga0495649_0002413_5847_7376 509
97 3300047317 Ga0495604_0000067 Ga0495604_0000067_37433_38962 509
98 3300047322 Ga0495680_0000114 Ga0495680_0000114_12627_14156 509
99 3300047322 Ga0495680_0000267 Ga0495680_0000267_14714_16264 509
100 3300047446 Ga0495679_009781 Ga0495679_009781_1352_2881 509
101 3300048088 Ga0495602_0052816 Ga0495602_0052816_558_2087 509
102 3300048088 Ga0495602_0106595 Ga0495602_0106595_40_1569 509
103 3300048903 Ga0496100_0000061 Ga0496100_0000061_13640_15169 509
104 3300048904 Ga0496101_0000141 Ga0496101_0000141_13640_15169 509
105 3300048905 Ga0496102_0001710 Ga0496102_0001710_9474_11006 509
106 3300048907 Ga0496104_0075427 Ga0496104_0075427_641_2173 509
107 3300048908 Ga0496105_0034548 Ga0496105_0034548_2546_4078 509
108 3300048909 Ga0496106_0000094 Ga0496106_0000094_13640_15169 509
109 3300048910 Ga0496107_0000045 Ga0496107_0000045_52263_53792 509
110 3300048913 Ga0496110_0045145 Ga0496110_0045145_1895_3424 509
111 3300048914 Ga0496111_0011403 Ga0496111_0011403_1668_3197 509
112 3300048917 Ga0496114_0000171 Ga0496114_0000171_23654_25183 509
113 3300048918 Ga0496115_0001687 Ga0496115_0001687_5214_6743 509
114 3300048920 Ga0496117_0006020 Ga0496117_0006020_91_1623 509
115 3300048921 Ga0496118_0000790 Ga0496118_0000790_16492_18024 509
116 3300048922 Ga0496119_0002341 Ga0496119_0002341_3772_5304 509
117 3300048922 Ga0496119_0005130 Ga0496119_0005130_3949_5481 509
118 3300048923 Ga0496120_0035207 Ga0496120_0035207_849_2381 509
119 3300048924 Ga0496121_0093952 Ga0496121_0093952_612_2144 509
120 3300048927 Ga0496124_0055758 Ga0496124_0055758_1645_3180 509
121 3300048928 Ga0496125_0057982 Ga0496125_0057982_293_1825 509
122 3300049578 Ga0501042_0015204 Ga0501042_0015204_849_2378 509
123 3300049585 Ga0501069_0022702 Ga0501069_0022702_639_2171 509
124 3300049586 Ga0501070_0076363 Ga0501070_0076363_608_2140 509
125 3300049587 Ga0501071_0091391 Ga0501071_0091391_25_1557 509
126 3300049743 Ga0501081_0033039 Ga0501081_0033039_751_2289 509
127 3300049744 Ga0501083_0015090 Ga0501083_0015090_120_1652 509
128 3300049744 Ga0501083_0080441 Ga0501083_0080441_107_1639 509
129 3300049823 Ga0501044_0101075 Ga0501044_0101075_95_1627 509
130 3300049824 Ga0501045_0124734 Ga0501045_0124734_337_1866 509
131 3300053077 Ga0495601_0000071 Ga0495601_0000071_16343_17872 509
132 3300053077 Ga0495601_0061438 Ga0495601_0061438_44_1573 509
133 3300053078 Ga0495612_0000110 Ga0495612_0000110_22503_24032 509
134 3300053078 Ga0495612_0000414 Ga0495612_0000414_5975_7504 509
135 3300053085 Ga0495619_0003148 Ga0495619_0003148_6443_7975 509
136 3300053096 Ga0500641_0013123 Ga0500641_0013123_621_2162 509
137 3300053134 Ga0500658_0047617 Ga0500658_0047617_13_1548 509
138 3300005329 Ga0070683_100002036 Ga0070683_1000020366 510
139 3300005341 Ga0070691_10005361 Ga0070691_100053613 510
140 3300005441 Ga0070700_100095218 Ga0070700_1000952182 510
141 3300005457 Ga0070662_100000002 Ga0070662_100000002155 510
142 3300005530 Ga0070679_100000129 Ga0070679_10000012946 510
143 3300005530 Ga0070679_100004961 Ga0070679_1000049612 510
144 3300005841 Ga0068863_100036016 Ga0068863_1000360162 510
145 3300005842 Ga0068858_100001794 Ga0068858_10000179423 510
146 3300005983 Ga0081540_1000628 Ga0081540_100062816 510
147 3300006175 Ga0070712_100000978 Ga0070712_1000009783 510
148 3300006852 Ga0075433_10000002 Ga0075433_1000000219 510
149 3300009093 Ga0105240_10205356 Ga0105240_102053562 510
150 3300009101 Ga0105247_10000347 Ga0105247_100003473 510
151 3300009176 Ga0105242_10000059 Ga0105242_1000005940 510
152 3300009176 Ga0105242_10000699 Ga0105242_100006992 510
153 3300009176 Ga0105242_10052181 Ga0105242_100521812 510
154 3300013297 Ga0157378_10165706 Ga0157378_101657062 510
155 3300013308 Ga0157375_10000171 Ga0157375_1000017137 510
156 3300014969 Ga0157376_10006578 Ga0157376_100065784 510
157 3300025900 Ga0207710_10000631 Ga0207710_1000063116 510
158 3300025915 Ga0207693_10003006 Ga0207693_1000300613 510
159 3300025921 Ga0207652_10000211 Ga0207652_1000021146 510
160 3300025921 Ga0207652_10002784 Ga0207652_1000278411 510
161 3300025933 Ga0207706_10000001 Ga0207706_10000001337 510
162 3300025934 Ga0207686_10000116 Ga0207686_100001167 510
163 3300025934 Ga0207686_10010036 Ga0207686_100100365 510
164 3300025934 Ga0207686_10030325 Ga0207686_100303253 510
165 3300026035 Ga0207703_10000018 Ga0207703_10000018252 510
166 3300026067 Ga0207678_10000556 Ga0207678_100005568 510
167 3300026075 Ga0207708_10084523 Ga0207708_100845233 510
168 3300026088 Ga0207641_10022213 Ga0207641_100222134 510
169 3300028563 Ga0265319_1000014 Ga0265319_1000014128 510
170 3300028666 Ga0265336_10022789 Ga0265336_100227892 510
171 3300028800 Ga0265338_10000244 Ga0265338_100002444 510
172 3300044842 Ga0466957_0066197 Ga0466957_0066197_570_2102 510
173 3300046455 Ga0495603_0001813 Ga0495603_0001813_7128_8711 510
174 3300046459 Ga0495629_0001620 Ga0495629_0001620_12123_13685 510
175 3300046499 Ga0495594_0000045 Ga0495594_0000045_31121_32689 510
176 3300046511 Ga0495608_0000007 Ga0495608_0000007_217981_219513 510
177 3300046529 Ga0495652_0000010 Ga0495652_0000010_154917_156449 510
178 3300046536 Ga0495587_0015176 Ga0495587_0015176_2867_4399 510
179 3300046557 Ga0495622_0001452 Ga0495622_0001452_8390_9961 510
180 3300046615 Ga0495656_0000931 Ga0495656_0000931_4985_6556 510
181 3300046675 Ga0495657_0000001 Ga0495657_0000001_350127_351659 510
182 3300047321 Ga0495676_0000186 Ga0495676_0000186_27072_28619 510
183 3300047444 Ga0495675_0000017 Ga0495675_0000017_93989_95521 510
184 3300048088 Ga0495602_0000775 Ga0495602_0000775_11951_13483 510
185 3300048918 Ga0496115_0000011 Ga0496115_0000011_176572_178128 510
186 3300048928 Ga0496125_0044566 Ga0496125_0044566_1831_3450 510
187 3300048929 Ga0496126_0018950 Ga0496126_0018950_3672_5252 510
188 3300048929 Ga0496126_0122410 Ga0496126_0122410_420_1991 510
189 3300050515 nmdc:mga0a205_13_c1 nmdc:mga0a205_13_c1_17723_19255 510
190 3300053084 Ga0495595_0000002 Ga0495595_0000002_93983_95515 510
191 3300053085 Ga0495619_0000008 Ga0495619_0000008_91207_92793 510
192 3300053085 Ga0495619_0000053 Ga0495619_0000053_47641_49173 510
193 3300053085 Ga0495619_0001401 Ga0495619_0001401_1681_3237 510
194 3300001979 JGI24740J21852_10006242 JGI24740J21852_100062423 511
195 3300013104 Ga0157370_10005610 Ga0157370_1000561012 511

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01761

DHQ_synthase

3-dehydroquinate synthase

232

346

0.98

PF01202

SKI

Shikimate kinase

12

160

0.94

PF24621

347

483

0.94

PF13685

Fe-ADH_2

Iron-containing alcohol dehydrogenase

208

340

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dft-assembly1.cif.gz_B structure of shikimate kinase from mycobacterium tuberculosis complexed with adp and mg at 2.8 angstrons of resolution 0.9133 4 159
1u8a-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis shikimate kinase in complex with shikimate and adp at 2.15 angstrom resolution 0.9132 4 159
2dft-assembly1.cif.gz_A structure of shikimate kinase from mycobacterium tuberculosis complexed with adp and mg at 2.8 angstrons of resolution 0.8955 4 159
1nvd-assembly1.cif.gz_B crystal structure of 3-dehydroquinate synthase (dhqs) in complex with zn2+ and carbaphosphonate 0.8943 199 506
3zok-assembly2.cif.gz_C structure of 3-dehydroquinate synthase from actinidia chinensis in complex with nad 0.8931 172 510
ID Description Score Start End Superfamily
1ujnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9081 171 329 3.40.50.1970
5hvnA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9032 170 328 3.40.50.1970
3qbdA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9025 169 329 3.40.50.1970
1xahB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9018 172 329 3.40.50.1970
af_A0A1D6IPW7_249_439_1.20.1090.10 Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain 0.8945 332 510 1.20.1090.10
ID Description Score Start End GO Terms
AF-A0A1Y1MIS5-F1-model_v4 3-dehydroquinate synthase domain-containing protein 0.9801 226 325 GO:0003856
GO:0009073
AF-A0A3B9D0Y8-F1-model_v4 3-dehydroquinate synthase 0.9746 226 316 GO:0003856
GO:0009073
AF-A0A2X1PI66-F1-model_v4 3-dehydroquinate synthase (EC 4.2.3.4) 0.9581 252 359 GO:0003856
GO:0009073
AF-A0A7S1KI02-F1-model_v4 3-dehydroquinate synthase domain-containing protein 0.9559 236 349 GO:0003856
GO:0009073
GO:0016020
AF-A0A538A1L4-F1-model_v4 3-dehydroquinate synthase 0.9491 153 479 GO:0003856
GO:0009073

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pLDDT pTM Quality
92.57 0.91 High
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Predicted Structure (AlphaFold2)

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