F299356

General Info

Members Datasets Scaffolds Average Seq Length
194 117 388 242

Family's Representative Sequence

Representative Sequence 3300059424|Ga0590075_002584|Ga0590075_002584_2289_3089
Length 266
Sequence MGEENMARRPMMAANWKMNKTVREAEEYTAALLPRAADAEEDVDVVVCAPHTCLHEVGRMAGDSAVIAGAQNFYHEDSGAYTGEVSAPMLLDVEAGAVIVGHSERREVFGETDEMVARKTRRAVEAEILPIVCVGETKEERDAGDMWEKVSGQVERVIEELEDPGGESVVFAYEPIWAIGTGDTATPEDAQDAIGRIRDLLREKNGDDFAESVRILYGGSVKPENAAEIMAQDDIDGALVGGASLEVESFVELIGAAQNAVAPPEQ

Samples

Sample ID Description Type Environment
1 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
67 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
68 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
69 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
70 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
77 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
106 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
113 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
114 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
115 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
116 2831426010 Nostoc sp. 106C Isolate Unclassified
117 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 2.58
Rhizosphere 91.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0590075_002584 3300059424 Bacteria 4327
2 Ga0070683_100781039 3300005329 Bacteria 915
3 Ga0070682_100333863 3300005337 Bacteria 1124
4 Ga0070687_100109983 3300005343 Bacteria 1558
5 Ga0070668_100393919 3300005347 Bacteria 1181
6 Ga0070674_100577502 3300005356 Bacteria 947
7 Ga0070709_10006200 3300005434 Bacteria 6508
8 Ga0070705_100009657 3300005440 Bacteria 4802
9 Ga0070708_100030743 3300005445 Bacteria 4643
10 Ga0070708_100044459 3300005445 Bacteria 3905
11 Ga0070708_100245103 3300005445 Bacteria 1683
12 Ga0070706_100059938 3300005467 Bacteria 3513
13 Ga0070706_100673219 3300005467 Bacteria 960
14 Ga0070707_100070967 3300005468 Bacteria 3355
15 Ga0070707_100089624 3300005468 Bacteria 2976
16 Ga0070698_100029879 3300005471 Bacteria 5654
17 Ga0070698_100840306 3300005471 Bacteria 863
18 Ga0070699_100043586 3300005518 Bacteria 3883
19 Ga0070686_100022987 3300005544 Bacteria 3721
20 Ga0070686_100107211 3300005544 Bacteria 1897
21 Ga0070695_100147942 3300005545 Bacteria 1636
22 Ga0070696_100055409 3300005546 Bacteria 2764
23 Ga0070696_100274855 3300005546 Bacteria 1282
24 Ga0070704_100068124 3300005549 Bacteria 2573
25 Ga0070704_100108170 3300005549 Bacteria 2110
26 Ga0068864_100778191 3300005618 Bacteria 939
27 Ga0068860_100000860 3300005843 Bacteria 33846
28 Ga0068860_100088086 3300005843 Bacteria 2955
29 Ga0068862_100544461 3300005844 Bacteria 1108
30 Ga0081455_10067750 3300005937 Bacteria 2973
31 Ga0081538_10010150 3300005981 Bacteria 7743
32 Ga0081538_10029784 3300005981 Bacteria 3721
33 Ga0081539_10000088 3300005985 Bacteria 212765
34 Ga0070716_100032875 3300006173 Bacteria 2833
35 Ga0068871_100223331 3300006358 Bacteria 1633
36 Ga0075433_10009468 3300006852 Bacteria 7786
37 Ga0075433_10430694 3300006852 Bacteria 1163
38 Ga0075434_100003679 3300006871 Bacteria 13696
39 Ga0075434_100166039 3300006871 Bacteria 2227
40 Ga0075434_100317677 3300006871 Bacteria 1578
41 Ga0075435_100064746 3300007076 Bacteria 2971
42 Ga0075435_100134531 3300007076 Bacteria 2070
43 Ga0099794_10015543 3300007265 Bacteria 3362
44 Ga0111539_10258545 3300009094 Bacteria 2027
45 Ga0111539_10344621 3300009094 Bacteria 1734
46 Ga0105245_10072118 3300009098 Bacteria 3137
47 Ga0114129_10008963 3300009147 Bacteria 14264
48 Ga0114129_10261009 3300009147 Bacteria 2322
49 Ga0105243_10436787 3300009148 Bacteria 1225
50 Ga0105248_11006164 3300009177 Bacteria 942
51 Ga0105239_10240216 3300010375 Bacteria 2033
52 Ga0157374_10062104 3300013296 Bacteria 3500
53 Ga0163162_10174035 3300013306 Bacteria 2277
54 Ga0157379_10001886 3300014968 Bacteria 17335
55 Ga0213875_10060213 3300021388 Bacteria 1776
56 Ga0209758_1000292 3300025297 Bacteria 98815
57 Ga0209050_1032160 3300025298 Bacteria 1619
58 Ga0207699_10004771 3300025906 Bacteria 6482
59 Ga0207646_10052071 3300025922 Bacteria 3663
60 Ga0207646_10064334 3300025922 Bacteria 3273
61 Ga0207709_10179179 3300025935 Bacteria 1495
62 Ga0207665_10002847 3300025939 Bacteria 11614
63 Ga0207703_10118468 3300026035 Bacteria 2270
64 Ga0207708_10072952 3300026075 Bacteria 2630
65 Ga0207674_10766430 3300026116 Bacteria 931
66 Ga0209588_1013089 3300027671 Bacteria 2526
67 Ga0209998_10000032 3300027717 Bacteria 60084
68 Ga0268264_10000596 3300028381 Bacteria 43714
69 Ga0265326_10018040 3300028558 Bacteria 2032
70 Ga0265338_10000686 3300028800 Bacteria 58116
71 Ga0307408_100183806 3300031548 Bacteria 1679
72 Ga0307408_100331905 3300031548 Bacteria 1285
73 Ga0307405_10554219 3300031731 Bacteria 931
74 Ga0307413_10381236 3300031824 Bacteria 1099
75 Ga0307410_10073370 3300031852 Bacteria 2379
76 Ga0307406_10549846 3300031901 Bacteria 944
77 Ga0307407_10029440 3300031903 Bacteria 2950
78 Ga0307409_100116142 3300031995 Bacteria 2255
79 Ga0307409_100186914 3300031995 Bacteria 1840
80 Ga0307409_100468284 3300031995 Bacteria 1220
81 Ga0307416_100029046 3300032002 Bacteria 4124
82 Ga0307416_100644573 3300032002 Bacteria 1143
83 Ga0307416_100758528 3300032002 Bacteria 1063
84 Ga0307416_100766827 3300032002 Bacteria 1058
85 Ga0307414_10093726 3300032004 Bacteria 2239
86 Ga0307414_10263882 3300032004 Bacteria 1439
87 Ga0307411_10110089 3300032005 Bacteria 1969
88 Ga0307411_10151053 3300032005 Bacteria 1726
89 Ga0307415_100049871 3300032126 Bacteria 2833
90 Ga0307415_100050487 3300032126 Bacteria 2819
91 Ga0307415_100840940 3300032126 Bacteria 841
92 Ga0316582_0081182 3300036647 Bacteria 2118
93 Ga0436364_0726772 3300037853 Bacteria 4526
94 Ga0237819_06999 3300038705 Bacteria 1650
95 Ga0400483_138232 3300039062 Bacteria 1047
96 Ga0436363_1060537 3300039450 Bacteria 921
97 Ga0450910_018204 3300042147 Bacteria 1049
98 Ga0466972_0000423 3300044658 Bacteria 21972
99 Ga0466965_0000478 3300044683 Bacteria 14167
100 Ga0466968_0000599 3300044735 Bacteria 12280
101 Ga0466960_0000277 3300044901 Bacteria 17826
102 Ga0466960_0149955 3300044901 Bacteria 1245
103 Ga0496108_0000046 3300048911 Bacteria 133726
104 Ga0496108_0713734 3300048911 Bacteria 869
105 Ga0496110_0131261 3300048913 Bacteria 2262
106 Ga0496110_0333555 3300048913 Bacteria 1382
107 Ga0496113_0628562 3300048916 Bacteria 859
108 Ga0501031_0016134 3300049568 Bacteria 4851
109 Ga0501031_0118813 3300049568 Bacteria 1727
110 Ga0501034_0000654 3300049571 Bacteria 53285
111 Ga0501036_0004280 3300049572 Bacteria 11525
112 Ga0501036_0053529 3300049572 Bacteria 3417
113 Ga0501036_0352119 3300049572 Bacteria 1230
114 Ga0501039_0000892 3300049575 Bacteria 21736
115 Ga0501039_0029615 3300049575 Bacteria 4216
116 Ga0501040_0006920 3300049576 Bacteria 7343
117 Ga0501040_0008242 3300049576 Bacteria 6777
118 Ga0501040_0164542 3300049576 Bacteria 1569
119 Ga0501040_0195951 3300049576 Bacteria 1434
120 Ga0501042_0004641 3300049578 Bacteria 8768
121 Ga0501046_0012974 3300049580 Bacteria 7079
122 Ga0501046_0099084 3300049580 Bacteria 2237
123 Ga0501047_0099718 3300049581 Bacteria 2784
124 Ga0501048_0000788 3300049582 Bacteria 23220
125 Ga0501048_0125250 3300049582 Bacteria 1816
126 Ga0501048_0565684 3300049582 Bacteria 816
127 Ga0501067_0075483 3300049583 Bacteria 1868
128 Ga0501068_0005791 3300049584 Bacteria 6778
129 Ga0501068_0046473 3300049584 Bacteria 2618
130 Ga0501068_0053060 3300049584 Bacteria 2453
131 Ga0501069_0250415 3300049585 Bacteria 1033
132 Ga0501070_0078598 3300049586 Bacteria 2730
133 Ga0501070_0234956 3300049586 Bacteria 1501
134 Ga0501071_0003973 3300049587 Bacteria 9329
135 Ga0501071_0015721 3300049587 Bacteria 5197
136 Ga0501071_0033595 3300049587 Bacteria 3644
137 Ga0501071_0059640 3300049587 Bacteria 2761
138 Ga0501071_0166835 3300049587 Bacteria 1648
139 Ga0501072_0002441 3300049588 Bacteria 13924
140 Ga0501072_0014251 3300049588 Bacteria 6091
141 Ga0501074_0006374 3300049590 Bacteria 8518
142 Ga0501074_0010170 3300049590 Bacteria 6829
143 Ga0501075_0001162 3300049591 Bacteria 17032
144 Ga0501075_0001259 3300049591 Bacteria 16393
145 Ga0501075_0064630 3300049591 Bacteria 2760
146 Ga0501075_0097597 3300049591 Bacteria 2230
147 Ga0501075_0195368 3300049591 Bacteria 1543
148 Ga0501075_0479425 3300049591 Bacteria 949
149 Ga0501076_0002861 3300049592 Bacteria 11943
150 Ga0501076_0098773 3300049592 Bacteria 2352
151 Ga0501076_0365982 3300049592 Bacteria 1185
152 Ga0501077_0195108 3300049593 Bacteria 1286
153 Ga0501079_0002761 3300049741 Bacteria 12803
154 Ga0501079_0128271 3300049741 Bacteria 1973
155 Ga0501079_0182102 3300049741 Bacteria 1640
156 Ga0501079_0315407 3300049741 Bacteria 1224
157 Ga0501079_0407648 3300049741 Bacteria 1066
158 Ga0501080_0030248 3300049742 Bacteria 5045
159 Ga0501080_0044776 3300049742 Bacteria 4119
160 Ga0501080_0077622 3300049742 Bacteria 3089
161 Ga0501081_0001873 3300049743 Bacteria 13074
162 Ga0501081_0040566 3300049743 Bacteria 3187
163 Ga0501083_0031494 3300049744 Bacteria 3640
164 Ga0501035_0408187 3300049822 Bacteria 1129
165 Ga0501035_0734841 3300049822 Bacteria 793
166 Ga0501044_0014083 3300049823 Bacteria 8636
167 Ga0501045_0001054 3300049824 Bacteria 18166
168 Ga0501045_0032469 3300049824 Bacteria 3783
169 Ga0501045_0478616 3300049824 Bacteria 925
170 nmdc:mga05p37_14337_c1 3300050507 Bacteria 9516
171 nmdc:mga0n895_2605_c1 3300050512 Bacteria 14183
172 nmdc:mga0n895_26669_c1 3300050512 Bacteria 5476
173 nmdc:mga0rr50_14027_c1 3300050513 Bacteria 5239
174 nmdc:mga0rr50_484408_c1 3300050513 Bacteria 1051
175 nmdc:mga0a205_28609_c1 3300050515 Bacteria 5329
176 Ga0500616_0251733 3300053153 Bacteria 754
177 Ga0501084_0005650 3300054114 Bacteria 10268
178 Ga0501084_0013948 3300054114 Bacteria 6651
179 Ga0501084_0017185 3300054114 Bacteria 6010
180 Ga0501084_0130026 3300054114 Bacteria 2120
181 Ga0501084_0720804 3300054114 Bacteria 841
182 Ga0590077_015540 3300059426 Bacteria 1592
183 Ga0501082_0004219 3300060353 Bacteria 12558
184 Ga0501082_0048780 3300060353 Bacteria 3650
185 Ga0501082_0145222 3300060353 Bacteria 2059
186 Ga0530510_0002987 3300061734 Bacteria 11597
187 Ga0530510_0036214 3300061734 Bacteria 3557
188 Ga0530510_0083451 3300061734 Bacteria 2327
189 Ga0530510_0125763 3300061734 Bacteria 1884
190 2524610820 2524023250 Bacteria 5457705
191 2585152714 2582581280 Bacteria 5994497
192 2585196427 2582581293 Bacteria 5907401
193 2831432144 2831426010 Bacteria 8662725
194 2886629962 2886627955 Bacteria 7618130
195 Ga0590075_002584
196 Ga0070683_100781039
197 Ga0070682_100333863
198 Ga0070687_100109983
199 Ga0070668_100393919
200 Ga0070674_100577502
201 Ga0070709_10006200
202 Ga0070705_100009657
203 Ga0070708_100030743
204 Ga0070708_100044459
205 Ga0070708_100245103
206 Ga0070706_100059938
207 Ga0070706_100673219
208 Ga0070707_100070967
209 Ga0070707_100089624
210 Ga0070698_100029879
211 Ga0070698_100840306
212 Ga0070699_100043586
213 Ga0070686_100022987
214 Ga0070686_100107211
215 Ga0070695_100147942
216 Ga0070696_100055409
217 Ga0070696_100274855
218 Ga0070704_100068124
219 Ga0070704_100108170
220 Ga0068864_100778191
221 Ga0068860_100000860
222 Ga0068860_100088086
223 Ga0068862_100544461
224 Ga0081455_10067750
225 Ga0081538_10010150
226 Ga0081538_10029784
227 Ga0081539_10000088
228 Ga0070716_100032875
229 Ga0068871_100223331
230 Ga0075433_10009468
231 Ga0075433_10430694
232 Ga0075434_100003679
233 Ga0075434_100166039
234 Ga0075434_100317677
235 Ga0075435_100064746
236 Ga0075435_100134531
237 Ga0099794_10015543
238 Ga0111539_10258545
239 Ga0111539_10344621
240 Ga0105245_10072118
241 Ga0114129_10008963
242 Ga0114129_10261009
243 Ga0105243_10436787
244 Ga0105248_11006164
245 Ga0105239_10240216
246 Ga0157374_10062104
247 Ga0163162_10174035
248 Ga0157379_10001886
249 Ga0213875_10060213
250 Ga0209758_1000292
251 Ga0209050_1032160
252 Ga0207699_10004771
253 Ga0207646_10052071
254 Ga0207646_10064334
255 Ga0207709_10179179
256 Ga0207665_10002847
257 Ga0207703_10118468
258 Ga0207708_10072952
259 Ga0207674_10766430
260 Ga0209588_1013089
261 Ga0209998_10000032
262 Ga0268264_10000596
263 Ga0265326_10018040
264 Ga0265338_10000686
265 Ga0307408_100183806
266 Ga0307408_100331905
267 Ga0307405_10554219
268 Ga0307413_10381236
269 Ga0307410_10073370
270 Ga0307406_10549846
271 Ga0307407_10029440
272 Ga0307409_100116142
273 Ga0307409_100186914
274 Ga0307409_100468284
275 Ga0307416_100029046
276 Ga0307416_100644573
277 Ga0307416_100758528
278 Ga0307416_100766827
279 Ga0307414_10093726
280 Ga0307414_10263882
281 Ga0307411_10110089
282 Ga0307411_10151053
283 Ga0307415_100049871
284 Ga0307415_100050487
285 Ga0307415_100840940
286 Ga0316582_0081182
287 Ga0436364_0726772
288 Ga0237819_06999
289 Ga0400483_138232
290 Ga0436363_1060537
291 Ga0450910_018204
292 Ga0466972_0000423
293 Ga0466965_0000478
294 Ga0466968_0000599
295 Ga0466960_0000277
296 Ga0466960_0149955
297 Ga0496108_0000046
298 Ga0496108_0713734
299 Ga0496110_0131261
300 Ga0496110_0333555
301 Ga0496113_0628562
302 Ga0501031_0016134
303 Ga0501031_0118813
304 Ga0501034_0000654
305 Ga0501036_0004280
306 Ga0501036_0053529
307 Ga0501036_0352119
308 Ga0501039_0000892
309 Ga0501039_0029615
310 Ga0501040_0006920
311 Ga0501040_0008242
312 Ga0501040_0164542
313 Ga0501040_0195951
314 Ga0501042_0004641
315 Ga0501046_0012974
316 Ga0501046_0099084
317 Ga0501047_0099718
318 Ga0501048_0000788
319 Ga0501048_0125250
320 Ga0501048_0565684
321 Ga0501067_0075483
322 Ga0501068_0005791
323 Ga0501068_0046473
324 Ga0501068_0053060
325 Ga0501069_0250415
326 Ga0501070_0078598
327 Ga0501070_0234956
328 Ga0501071_0003973
329 Ga0501071_0015721
330 Ga0501071_0033595
331 Ga0501071_0059640
332 Ga0501071_0166835
333 Ga0501072_0002441
334 Ga0501072_0014251
335 Ga0501074_0006374
336 Ga0501074_0010170
337 Ga0501075_0001162
338 Ga0501075_0001259
339 Ga0501075_0064630
340 Ga0501075_0097597
341 Ga0501075_0195368
342 Ga0501075_0479425
343 Ga0501076_0002861
344 Ga0501076_0098773
345 Ga0501076_0365982
346 Ga0501077_0195108
347 Ga0501079_0002761
348 Ga0501079_0128271
349 Ga0501079_0182102
350 Ga0501079_0315407
351 Ga0501079_0407648
352 Ga0501080_0030248
353 Ga0501080_0044776
354 Ga0501080_0077622
355 Ga0501081_0001873
356 Ga0501081_0040566
357 Ga0501083_0031494
358 Ga0501035_0408187
359 Ga0501035_0734841
360 Ga0501044_0014083
361 Ga0501045_0001054
362 Ga0501045_0032469
363 Ga0501045_0478616
364 nmdc:mga05p37_14337_c1
365 nmdc:mga0n895_2605_c1
366 nmdc:mga0n895_26669_c1
367 nmdc:mga0rr50_14027_c1
368 nmdc:mga0rr50_484408_c1
369 nmdc:mga0a205_28609_c1
370 Ga0500616_0251733
371 Ga0501084_0005650
372 Ga0501084_0013948
373 Ga0501084_0017185
374 Ga0501084_0130026
375 Ga0501084_0720804
376 Ga0590077_015540
377 Ga0501082_0004219
378 Ga0501082_0048780
379 Ga0501082_0145222
380 Ga0530510_0002987
381 Ga0530510_0036214
382 Ga0530510_0083451
383 Ga0530510_0125763
384 2524610820
385 2585152714
386 2585196427
387 2831432144
388 2886629962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00121

TIM

Triosephosphate isomerase

10

257

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1b9b-assembly1.cif.gz_B triosephosphate isomerase of thermotoga maritima 0.983 2 246
4y96-assembly1.cif.gz_A crystal structure of triosephosphate isomerase from gemmata obscuriglobus 0.9804 1 247
6nlh-assembly4.cif.gz_H structure of human triose phosphate isomerase r189a 0.9766 4 247
6nlh-assembly1.cif.gz_E structure of human triose phosphate isomerase r189a 0.9766 5 247
1btm-assembly1.cif.gz_B triosephosphate isomerase (tim) complexed with 2-phosphoglycolic acid 0.975 2 247
ID Description Score Start End Superfamily
4y96A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9804 1 247 3.20.20.70
af_P17751_41_299_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9738 41 247 3.20.20.70
af_P0A858_1_255_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9708 1 247 3.20.20.70
af_Q4DV43_1_251_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9705 2 247 3.20.20.70
3taoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9702 1 247 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A660ZL10-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9942 1 206 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A1G0VL66-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9936 40 222 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A351FD51-F1-model_v4 Triosephosphate isomerase (EC 5.3.1.1) 0.9931 1 228 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166
AF-A0A3P5VJF7-F1-model_v4 deleted 0.9911 44 247
AF-A0A2E5ECT0-F1-model_v4 Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase) 0.991 2 247 GO:0004807
GO:0005829
GO:0006094
GO:0006096
GO:0019563
GO:0046166

Map