F298701

General Info

Members Datasets Scaffolds Average Seq Length
194 159 388 472

Family's Representative Sequence

Representative Sequence 3300017792|Ga0163161_10002676|Ga0163161_100026767
Length 516
Sequence MTVAVEDSPVIDTANTLDQQRRAFLNDGPPGLKRRRANLVKLRAVVLAHRREIEDAISTDFGNRSRHETDIMELLGVVQSIDYLLRHLRRFMKPERRHVAAFHRTGRAYVEYQPKGVIGVMAPWNYPFSLTFIPLATALAAGNRVMIKPSELTPRTSELIQRMLASCFSDDEVAVVLGGPETGAYFSGLPFDHLLFTGSTQVGRMVMRAASENLVPLTLELGGKSPVVVAPGHAGRSALESIVFGKLSNAGQTCVAPDYALVHEDDLGEFITQYRDAVARSYPQGPTSPDYTSIISDRHYMRLHTLIKDARAKGAGVIEVGVTPERAAERPRTLAPVLIVGAEDDALVMQEEIFGPLLPVRTYRSLDEVIDYINARPRPLALYYFGNMDADSEAVIKRTTSGNVGINNTLLHVAVDDLPFGGVGPSGMGAYHGIEGFRSMSHAKGVFVQGRWSLPSMLRAPFGKLAEFAISITLRARHNSKSSGRGSTPAPSCFSPLADPLRRYCVSPRWVANEVR

Samples

Sample ID Description Type Environment
1 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
39 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
103 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
104 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
105 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
106 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
116 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
120 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
121 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
124 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
125 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
126 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
127 2508501050 Microvirga lupini Lut6 Isolate Nodule
128 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
129 2511231017 Pseudomonas sp. GM55 Isolate Nodule
130 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
131 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
132 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
133 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
134 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
135 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
136 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
137 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
138 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
139 2818991452 Burkholderia cepacia 561 Isolate Unclassified
140 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
141 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
142 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
143 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
144 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
145 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
146 2928170801 Burkholderia sp. 572 Isolate Unclassified
147 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
148 2937967321 Serratia sp. YC16 Isolate Unclassified
149 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
150 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
151 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
152 8004592986 Serratia sp. S119 Isolate Unclassified
153 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
154 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
155 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
156 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
157 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
158 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
159 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.99
Metatranscriptomes 0
Isolates 17.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.23
Nodule 9.28
Rhizoplane 6.7
Rhizosphere 46.91
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163161_10002676 3300017792 Bacteria 12659
2 SwRhRL2b_contig_909002 2162886007 Bacteria 18869
3 JGI25162J39368_1001280 3300002737 Bacteria 14278
4 JGI25164J39214_1000349 3300002772 Bacteria 28764
5 JGI25165J46597_1001809 3300003214 Bacteria 9003
6 JGI25160J50197_1000774 3300003354 Bacteria 17157
7 Ga0055532_1000114 3300003758 Bacteria 85635
8 Ga0055532_1000237 3300003758 Bacteria 40420
9 Ga0055527_1000040 3300003760 Bacteria 118145
10 Ga0055535_1000036 3300003761 Bacteria 162035
11 Ga0055542_1000061 3300003762 Bacteria 162035
12 Ga0055529_1000069 3300003763 Bacteria 162035
13 Ga0055524_1000242 3300003775 Bacteria 57160
14 Ga0055528_1002302 3300003790 Bacteria 10345
15 Ga0055540_1000011 3300003792 Bacteria 282927
16 Ga0058692_1000051 3300003856 Bacteria 107880
17 Ga0065165_1000001 3300005262 Bacteria 494087
18 Ga0065165_1002238 3300005262 Bacteria 17195
19 Ga0065165_1003002 3300005262 Bacteria 12769
20 Ga0065704_10000292 3300005289 Bacteria 38314
21 Ga0070667_100007401 3300005367 Bacteria 9121
22 Ga0070698_100001243 3300005471 Bacteria 28426
23 Ga0070698_100191246 3300005471 Bacteria 1984
24 Ga0068853_100115295 3300005539 Bacteria 2391
25 Ga0068855_100006151 3300005563 Bacteria 14634
26 Ga0068855_100037358 3300005563 Bacteria 5776
27 Ga0068856_100006938 3300005614 Bacteria 11077
28 Ga0068856_100084279 3300005614 Bacteria 3157
29 Ga0068859_100095732 3300005617 Bacteria 3021
30 Ga0068860_100010020 3300005843 Bacteria 9394
31 Ga0081538_10017729 3300005981 Bacteria 5386
32 Ga0070717_10017301 3300006028 Bacteria 5608
33 Ga0075429_100060559 3300006880 Bacteria 3297
34 Ga0097620_100095735 3300006931 Bacteria 3021
35 Ga0105251_10004224 3300009011 Bacteria 9930
36 Ga0105244_10000176 3300009036 Bacteria 64935
37 Ga0105240_10010061 3300009093 Bacteria 13317
38 Ga0105240_10011538 3300009093 Bacteria 12298
39 Ga0105240_10035025 3300009093 Bacteria 6473
40 Ga0114129_10220644 3300009147 Bacteria 2558
41 Ga0105241_10032256 3300009174 Bacteria 3926
42 Ga0105241_10041089 3300009174 Bacteria 3492
43 Ga0105238_10194904 3300009551 Bacteria 2002
44 Ga0105239_10000337 3300010375 Bacteria 68698
45 Ga0105239_10098509 3300010375 Bacteria 3232
46 Ga0157375_10009201 3300013308 Bacteria 8660
47 Ga0163163_10001211 3300014325 Bacteria 21825
48 Ga0183362_10013 3300015683 Bacteria 44128
49 Ga0209566_100274 3300025225 Bacteria 48108
50 Ga0209672_100035 3300025228 Bacteria 303111
51 Ga0209147_100037 3300025229 Bacteria 326977
52 Ga0209147_100041 3300025229 Bacteria 303111
53 Ga0209563_100414 3300025230 Bacteria 15090
54 Ga0207427_100044 3300025231 Bacteria 242623
55 Ga0209437_100005 3300025233 Bacteria 1071596
56 Ga0209258_100029 3300025242 Bacteria 490648
57 Ga0209258_100063 3300025242 Bacteria 303577
58 Ga0209148_1000088 3300025254 Bacteria 258188
59 Ga0209148_1000163 3300025254 Bacteria 137449
60 Ga0209233_1000011 3300025261 Bacteria 1071611
61 Ga0209565_1009596 3300025263 Bacteria 2444
62 Ga0209455_1000075 3300025272 Bacteria 285430
63 Ga0209673_1000061 3300025273 Bacteria 262274
64 Ga0209050_1000416 3300025298 Bacteria 78976
65 Ga0209256_1000092 3300025299 Bacteria 210547
66 Ga0207426_1000103 3300025302 Bacteria 250320
67 Ga0207426_1020697 3300025302 Bacteria 2283
68 Ga0209051_1000020 3300025303 Bacteria 508628
69 Ga0209257_1000085 3300025304 Bacteria 291117
70 Ga0207655_1000330 3300025728 Bacteria 69204
71 Ga0207713_1019839 3300025735 Bacteria 3275
72 Ga0207654_10011029 3300025911 Bacteria 4599
73 Ga0207654_10040551 3300025911 Bacteria 2624
74 Ga0207695_10001774 3300025913 Bacteria 34048
75 Ga0207695_10006932 3300025913 Bacteria 14559
76 Ga0207695_10031512 3300025913 Bacteria 5811
77 Ga0207644_10063954 3300025931 Bacteria 2673
78 Ga0207667_10021201 3300025949 Bacteria 7204
79 Ga0207667_10034214 3300025949 Bacteria 5459
80 Ga0207651_10052784 3300025960 Bacteria 2774
81 Ga0207668_10125947 3300025972 Bacteria 1948
82 Ga0207658_10037144 3300025986 Bacteria 3497
83 Ga0207677_10003154 3300026023 Bacteria 8702
84 Ga0207639_10102362 3300026041 Bacteria 2318
85 Ga0207702_10052703 3300026078 Bacteria 3443
86 Ga0209371_1000008 3300027312 Bacteria 1024606
87 Ga0268266_10042077 3300028379 Bacteria 3900
88 Ga0268264_10007552 3300028381 Bacteria 9070
89 Ga0268256_1000009 3300030500 Bacteria 1022625
90 Ga0265327_10000841 3300031251 Bacteria 45822
91 Ga0307408_100019110 3300031548 Bacteria 4611
92 Ga0307408_100021225 3300031548 Bacteria 4393
93 Ga0316576_10015123 3300031727 Bacteria 5170
94 Ga0316576_10028997 3300031727 Bacteria 3907
95 Ga0307405_10066387 3300031731 Bacteria 2300
96 Ga0316577_10025829 3300031733 Bacteria 3267
97 Ga0373946_0048097 3300035171 Bacteria 1774
98 Ga0316574_0073983 3300035398 Bacteria 2155
99 Ga0373931_0002036 3300035691 Bacteria 8894
100 Ga0316584_0154350 3300036712 Bacteria 1708
101 Ga0395900_0147905 3300037418 Bacteria 2401
102 Ga0237819_01075 3300038705 Bacteria 8087
103 Ga0436361_1002489 3300039447 Bacteria 5106
104 Ga0451577_0025358 3300042876 Bacteria 5380
105 Ga0466969_0062406 3300044656 Bacteria 1808
106 Ga0466966_0029894 3300044684 Bacteria 3542
107 Ga0466959_0000738 3300045049 Bacteria 19122
108 Ga0495639_0000023 3300046475 Bacteria 70927
109 Ga0495594_0002158 3300046499 Bacteria 10241
110 Ga0495622_0000135 3300046557 Bacteria 63001
111 Ga0495661_0001847 3300046665 Bacteria 16912
112 Ga0496101_0105814 3300048904 Bacteria 2112
113 Ga0496104_0049274 3300048907 Bacteria 3972
114 Ga0496105_0000845 3300048908 Bacteria 20862
115 Ga0496109_0077475 3300048912 Bacteria 3059
116 Ga0496109_0083414 3300048912 Bacteria 2947
117 Ga0496110_0008422 3300048913 Bacteria 8297
118 Ga0496110_0057012 3300048913 Bacteria 3438
119 Ga0496111_0008210 3300048914 Bacteria 6901
120 Ga0496112_0043679 3300048915 Bacteria 4388
121 Ga0496113_0087282 3300048916 Bacteria 2398
122 Ga0496114_0002518 3300048917 Bacteria 13992
123 Ga0496115_0001909 3300048918 Bacteria 14878
124 Ga0496119_0000582 3300048922 Bacteria 49332
125 Ga0496119_0000900 3300048922 Bacteria 38780
126 Ga0496120_0000287 3300048923 Bacteria 84850
127 Ga0496120_0000364 3300048923 Bacteria 73688
128 Ga0496122_0000988 3300048925 Bacteria 50798
129 Ga0496122_0005385 3300048925 Bacteria 15275
130 Ga0496123_0000198 3300048926 Bacteria 122508
131 Ga0496123_0004257 3300048926 Bacteria 15237
132 Ga0496123_0054392 3300048926 Bacteria 2636
133 Ga0496124_0001050 3300048927 Bacteria 43582
134 Ga0496124_0001655 3300048927 Bacteria 31821
135 Ga0496124_0001884 3300048927 Bacteria 28875
136 Ga0496125_0009473 3300048928 Bacteria 9998
137 Ga0496125_0092326 3300048928 Bacteria 2264
138 Ga0496126_0001707 3300048929 Bacteria 32618
139 Ga0496126_0046092 3300048929 Bacteria 4002
140 Ga0501033_0142868 3300049570 Bacteria 1730
141 Ga0501036_0029826 3300049572 Bacteria 4610
142 Ga0501040_0002136 3300049576 Bacteria 12755
143 Ga0501040_0140017 3300049576 Bacteria 1704
144 Ga0501041_0135007 3300049577 Bacteria 1537
145 Ga0501041_0153666 3300049577 Bacteria 1438
146 Ga0501048_0026776 3300049582 Bacteria 4197
147 Ga0501048_0136332 3300049582 Bacteria 1735
148 Ga0501074_0137958 3300049590 Bacteria 1745
149 Ga0501264_000089 3300049761 Bacteria 13256
150 nmdc:mga03683_33424_c1 3300050489 Bacteria 2075
151 nmdc:mga05p37_18005_c1 3300050507 Bacteria 8531
152 nmdc:mga0qj67_176694_c1 3300050509 Unclassified 1734
153 Ga0500643_002006 3300053087 Bacteria 10958
154 Ga0500641_0000190 3300053096 Bacteria 23143
155 Ga0500600_0042312 3300053149 Bacteria 2625
156 Ga0500616_0000791 3300053153 Bacteria 36278
157 Ga0500636_0000048 3300053177 Bacteria 57866
158 Ga0500636_0011611 3300053177 Bacteria 5156
159 Ga0500637_0000199 3300053178 Bacteria 22445
160 Ga0500625_007034 3300053729 Bacteria 4851
161 Ga0500565_000921 3300053734 Bacteria 1807
162 2508728700 2508501050 Bacteria 9633614
163 2510135777 2510065019 Bacteria 6903379
164 2511333059 2511231017 Bacteria 6503007
165 2511389945 2511231027 Bacteria 5013807
166 2513904241 2513237143 Bacteria 6664116
167 2513911120 2513237144 Bacteria 7530820
168 2515114953 2515075009 Bacteria 7288508
169 2517409037 2517287029 Bacteria 6905599
170 2585998539 2585427633 Bacteria 6413184
171 2599738991 2599185239 Bacteria 8686614
172 2644159104 2643221628 Bacteria 5745828
173 2772439818 2772190666 Bacteria 5117644
174 2819631562 2818991452 Bacteria 8442785
175 2841734711 2841734538 Bacteria 6784580
176 2842326427 2842324504 Bacteria 9364110
177 2842351055 2842348783 Bacteria 9002918
178 2871476400 2871474448 Bacteria 6806570
179 2888369934 2888366609 Bacteria 5155009
180 2898798271 2898795034 Bacteria 4294459
181 2928175963 2928170801 Bacteria 8785406
182 2937842848 2937836603 Bacteria 6811263
183 2937968461 2937967321 Bacteria 5094075
184 2958074849 2958071322 Bacteria 6815895
185 3005719928 3005718088 Bacteria 8283608
186 641334047 641228493 Bacteria 3999591
187 8004595915 8004592986 Bacteria 5122074
188 8004637575 8004633249 Bacteria 6723080
189 8005465648 8005460587 Bacteria 7157962
190 8006996853 8006994254 Bacteria 8309700
191 8015397987 8015394850 Bacteria 5064660
192 8018847282 8018845410 Bacteria 8933938
193 8021125965 8021120328 Bacteria 8782274
194 8054461794 8054460903 Bacteria 4872905
195 Ga0163161_10002676
196 SwRhRL2b_contig_909002
197 JGI25162J39368_1001280
198 JGI25164J39214_1000349
199 JGI25165J46597_1001809
200 JGI25160J50197_1000774
201 Ga0055532_1000114
202 Ga0055532_1000237
203 Ga0055527_1000040
204 Ga0055535_1000036
205 Ga0055542_1000061
206 Ga0055529_1000069
207 Ga0055524_1000242
208 Ga0055528_1002302
209 Ga0055540_1000011
210 Ga0058692_1000051
211 Ga0065165_1000001
212 Ga0065165_1002238
213 Ga0065165_1003002
214 Ga0065704_10000292
215 Ga0070667_100007401
216 Ga0070698_100001243
217 Ga0070698_100191246
218 Ga0068853_100115295
219 Ga0068855_100006151
220 Ga0068855_100037358
221 Ga0068856_100006938
222 Ga0068856_100084279
223 Ga0068859_100095732
224 Ga0068860_100010020
225 Ga0081538_10017729
226 Ga0070717_10017301
227 Ga0075429_100060559
228 Ga0097620_100095735
229 Ga0105251_10004224
230 Ga0105244_10000176
231 Ga0105240_10010061
232 Ga0105240_10011538
233 Ga0105240_10035025
234 Ga0114129_10220644
235 Ga0105241_10032256
236 Ga0105241_10041089
237 Ga0105238_10194904
238 Ga0105239_10000337
239 Ga0105239_10098509
240 Ga0157375_10009201
241 Ga0163163_10001211
242 Ga0183362_10013
243 Ga0209566_100274
244 Ga0209672_100035
245 Ga0209147_100037
246 Ga0209147_100041
247 Ga0209563_100414
248 Ga0207427_100044
249 Ga0209437_100005
250 Ga0209258_100029
251 Ga0209258_100063
252 Ga0209148_1000088
253 Ga0209148_1000163
254 Ga0209233_1000011
255 Ga0209565_1009596
256 Ga0209455_1000075
257 Ga0209673_1000061
258 Ga0209050_1000416
259 Ga0209256_1000092
260 Ga0207426_1000103
261 Ga0207426_1020697
262 Ga0209051_1000020
263 Ga0209257_1000085
264 Ga0207655_1000330
265 Ga0207713_1019839
266 Ga0207654_10011029
267 Ga0207654_10040551
268 Ga0207695_10001774
269 Ga0207695_10006932
270 Ga0207695_10031512
271 Ga0207644_10063954
272 Ga0207667_10021201
273 Ga0207667_10034214
274 Ga0207651_10052784
275 Ga0207668_10125947
276 Ga0207658_10037144
277 Ga0207677_10003154
278 Ga0207639_10102362
279 Ga0207702_10052703
280 Ga0209371_1000008
281 Ga0268266_10042077
282 Ga0268264_10007552
283 Ga0268256_1000009
284 Ga0265327_10000841
285 Ga0307408_100019110
286 Ga0307408_100021225
287 Ga0316576_10015123
288 Ga0316576_10028997
289 Ga0307405_10066387
290 Ga0316577_10025829
291 Ga0373946_0048097
292 Ga0316574_0073983
293 Ga0373931_0002036
294 Ga0316584_0154350
295 Ga0395900_0147905
296 Ga0237819_01075
297 Ga0436361_1002489
298 Ga0451577_0025358
299 Ga0466969_0062406
300 Ga0466966_0029894
301 Ga0466959_0000738
302 Ga0495639_0000023
303 Ga0495594_0002158
304 Ga0495622_0000135
305 Ga0495661_0001847
306 Ga0496101_0105814
307 Ga0496104_0049274
308 Ga0496105_0000845
309 Ga0496109_0077475
310 Ga0496109_0083414
311 Ga0496110_0008422
312 Ga0496110_0057012
313 Ga0496111_0008210
314 Ga0496112_0043679
315 Ga0496113_0087282
316 Ga0496114_0002518
317 Ga0496115_0001909
318 Ga0496119_0000582
319 Ga0496119_0000900
320 Ga0496120_0000287
321 Ga0496120_0000364
322 Ga0496122_0000988
323 Ga0496122_0005385
324 Ga0496123_0000198
325 Ga0496123_0004257
326 Ga0496123_0054392
327 Ga0496124_0001050
328 Ga0496124_0001655
329 Ga0496124_0001884
330 Ga0496125_0009473
331 Ga0496125_0092326
332 Ga0496126_0001707
333 Ga0496126_0046092
334 Ga0501033_0142868
335 Ga0501036_0029826
336 Ga0501040_0002136
337 Ga0501040_0140017
338 Ga0501041_0135007
339 Ga0501041_0153666
340 Ga0501048_0026776
341 Ga0501048_0136332
342 Ga0501074_0137958
343 Ga0501264_000089
344 nmdc:mga03683_33424_c1
345 nmdc:mga05p37_18005_c1
346 nmdc:mga0qj67_176694_c1
347 Ga0500643_002006
348 Ga0500641_0000190
349 Ga0500600_0042312
350 Ga0500616_0000791
351 Ga0500636_0000048
352 Ga0500636_0011611
353 Ga0500637_0000199
354 Ga0500625_007034
355 Ga0500565_000921
356 2508728700
357 2510135777
358 2511333059
359 2511389945
360 2513904241
361 2513911120
362 2515114953
363 2517409037
364 2585998539
365 2599738991
366 2644159104
367 2772439818
368 2819631562
369 2841734711
370 2842326427
371 2842351055
372 2871476400
373 2888369934
374 2898798271
375 2928175963
376 2937842848
377 2937968461
378 2958074849
379 3005719928
380 641334047
381 8004595915
382 8004637575
383 8005465648
384 8006996853
385 8015397987
386 8018847282
387 8021125965
388 8054461794

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

12

446

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l1o-assembly1.cif.gz_A crystal structure of human aldh3a1 with inhibitor 1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-1h-indole-2,3-dione 0.9575 14 463
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9571 14 463
8bb8-assembly1.cif.gz_A crystal structure of human aldehyde dehydrogenase aldh3a1 in complex with octanal 0.9567 14 463
5ucd-assembly1.cif.gz_B benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with bound nadp+ and benzoate adduct 0.9525 15 448
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9487 14 463
ID Description Score Start End Superfamily
af_F1LT79_6_152_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9724 77 222 3.40.605.10
af_Q2FWX9_4_206_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9716 15 216 3.40.605.10
af_A0A486WWU7_1_211_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.971 11 222 3.40.605.10
af_A0A2R8PW97_5_423_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.968 15 442 3.40.605.10
af_Q4DZ74_13_221_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.968 15 222 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A4R9YMK7-F1-model_v4 deleted 0.997 113 207
AF-A0A7X7T091-F1-model_v4 deleted 0.9805 14 474
AF-A0A165NRN3-F1-model_v4 deleted 0.9805 15 474
AF-A0A2D5EHM7-F1-model_v4 Coniferyl-aldehyde dehydrogenase 0.9799 15 320 GO:0004029
GO:0005737
GO:0006081
AF-A0A432W1Y4-F1-model_v4 Aldehyde dehydrogenase 0.9775 15 473 GO:0004029
GO:0005737
GO:0006081

Map