F298132

General Info

Members Datasets Scaffolds Average Seq Length
194 138 388 287

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100040509|Ga0070690_1000405093
Length 318
Sequence MADAYGVVRRIPRRRGSFSSTRGADRCDDRRPMKRILVTGATGNIGREVVAQLTATGCHVRAMSRRPETANLPAQVEAVRGDLSAPDTLDACLRDIDAVFLVWQLPLAPAAAAVQRIASQAKSVVLLTSPHRTPHPFYQQPNALRAVHAGLEQLIEQSGLQWTFLRPGPFAINALRWWGPQIRSGNVVRWYYATAATAPVHEHDIAAAAVRAICDAGHDGSEYVLTGPESLTQREQVEIIGDAIGRALQYEELSPAAARQYLAAMMPPSIADMLLTAYGAATDRPALVTSTIADVTGEPARSFRHWAADHAAAFVTPS

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
94 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
95 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
96 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
97 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
98 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
101 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
102 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
103 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
104 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
105 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
131 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
134 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
135 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
136 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
137 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
138 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.03
Rhizoplane 2.58
Rhizosphere 93.3
Stem 0
Stem Tuber 0
Unclassified 7.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100040509 3300005330 Bacteria 2947
2 MBSR1b_contig_5694301 2162886012 Bacteria 1003
3 Ga0065712_10067780 3300005290 Bacteria 37076
4 Ga0065712_10077576 3300005290 Bacteria 3473
5 Ga0070658_10101324 3300005327 Bacteria 2381
6 Ga0070676_10003851 3300005328 Bacteria 7879
7 Ga0070670_100238322 3300005331 Bacteria 1584
8 Ga0070666_10044902 3300005335 Bacteria 2962
9 Ga0070660_100323564 3300005339 Bacteria 1267
10 Ga0070691_10005266 3300005341 Bacteria 5875
11 Ga0070687_100009867 3300005343 Bacteria 4102
12 Ga0070668_100159975 3300005347 Bacteria 1827
13 Ga0070669_100012753 3300005353 Bacteria 5966
14 Ga0070671_100006914 3300005355 Bacteria 9086
15 Ga0070671_100026481 3300005355 Bacteria 4766
16 Ga0070674_100010520 3300005356 Bacteria 5598
17 Ga0070688_100015778 3300005365 Bacteria 4306
18 Ga0070688_100022321 3300005365 Bacteria 3706
19 Ga0070709_10003100 3300005434 Bacteria 8927
20 Ga0070714_100249026 3300005435 Bacteria 1642
21 Ga0070713_100109417 3300005436 Bacteria 2408
22 Ga0070713_100134560 3300005436 Bacteria 2183
23 Ga0070710_10145774 3300005437 Bacteria 1456
24 Ga0070711_100076540 3300005439 Bacteria 2372
25 Ga0070705_100000757 3300005440 Bacteria 18328
26 Ga0070705_100003980 3300005440 Bacteria 7220
27 Ga0070705_100261242 3300005440 Bacteria 1221
28 Ga0070700_100036958 3300005441 Bacteria 2966
29 Ga0070694_100034549 3300005444 Bacteria 3335
30 Ga0070694_100090706 3300005444 Bacteria 2143
31 Ga0070662_100045778 3300005457 Bacteria 3141
32 Ga0068867_100003438 3300005459 Bacteria 11137
33 Ga0070685_10289815 3300005466 Bacteria 1099
34 Ga0070706_100434893 3300005467 Bacteria 1221
35 Ga0070707_100016619 3300005468 Bacteria 6908
36 Ga0070697_100289233 3300005536 Unclassified 1407
37 Ga0070672_100202835 3300005543 Bacteria 1659
38 Ga0070686_100001917 3300005544 Bacteria 11570
39 Ga0070695_100000360 3300005545 Bacteria 23381
40 Ga0070695_100210004 3300005545 Bacteria 1397
41 Ga0070695_100420977 3300005545 Bacteria 1017
42 Ga0070696_100032495 3300005546 Bacteria 3580
43 Ga0070696_100032783 3300005546 Bacteria 3566
44 Ga0070704_100034593 3300005549 Bacteria 3428
45 Ga0070664_100103912 3300005564 Bacteria 2474
46 Ga0068854_100003150 3300005578 Bacteria 10277
47 Ga0070702_100004172 3300005615 Bacteria 6572
48 Ga0070702_100034233 3300005615 Bacteria 2799
49 Ga0068852_100060130 3300005616 Bacteria 3298
50 Ga0068859_100449208 3300005617 Bacteria 1385
51 Ga0068864_100390819 3300005618 Bacteria 1320
52 Ga0068861_100002061 3300005719 Bacteria 13036
53 Ga0068863_100639104 3300005841 Unclassified 1055
54 Ga0068862_100140302 3300005844 Bacteria 2144
55 Ga0068862_100753586 3300005844 Unclassified 947
56 Ga0081538_10004206 3300005981 Bacteria 13350
57 Ga0070712_100302847 3300006175 Bacteria 1294
58 Ga0068871_100399849 3300006358 Unclassified 1223
59 Ga0075428_100003955 3300006844 Bacteria 16254
60 Ga0075430_100032868 3300006846 Bacteria 4403
61 Ga0075430_100208378 3300006846 Bacteria 1622
62 Ga0075431_100001226 3300006847 Bacteria 23249
63 Ga0075431_100028621 3300006847 Bacteria 5728
64 Ga0075431_100181064 3300006847 Bacteria 2163
65 Ga0075433_10007037 3300006852 Bacteria 8910
66 Ga0075433_10058714 3300006852 Bacteria 3365
67 Ga0075434_100005579 3300006871 Bacteria 11466
68 Ga0075434_100044377 3300006871 Bacteria 4410
69 Ga0075434_100259139 3300006871 Bacteria 1758
70 Ga0075434_100416398 3300006871 Bacteria 1365
71 Ga0075429_100022864 3300006880 Bacteria 5421
72 Ga0075429_100107728 3300006880 Unclassified 2435
73 Ga0075429_100447538 3300006880 Bacteria 1132
74 Ga0075436_100023378 3300006914 Bacteria 4246
75 Ga0097620_100449193 3300006931 Bacteria 1385
76 Ga0075435_100000072 3300007076 Bacteria 51797
77 Ga0075435_100029342 3300007076 Bacteria 4316
78 Ga0075435_100037250 3300007076 Bacteria 3871
79 Ga0075435_100079037 3300007076 Bacteria 2698
80 Ga0075435_100080001 3300007076 Bacteria 2683
81 Ga0105240_10258860 3300009093 Bacteria 2008
82 Ga0111539_10000226 3300009094 Bacteria 67584
83 Ga0111539_10002499 3300009094 Bacteria 24388
84 Ga0111539_10496821 3300009094 Bacteria 1421
85 Ga0114129_10070730 3300009147 Bacteria 4865
86 Ga0114129_10091468 3300009147 Bacteria 4215
87 Ga0105243_10004930 3300009148 Bacteria 10458
88 Ga0105241_10080129 3300009174 Bacteria 2555
89 Ga0105248_10081088 3300009177 Bacteria 3647
90 Ga0105248_10466605 3300009177 Bacteria 1423
91 Ga0157376_10018074 3300014969 Bacteria 5395
92 Ga0207692_10104868 3300025898 Bacteria 1559
93 Ga0207688_10190162 3300025901 Bacteria 1227
94 Ga0207680_10052581 3300025903 Bacteria 2442
95 Ga0207699_10078584 3300025906 Bacteria 2038
96 Ga0207645_10001470 3300025907 Bacteria 19250
97 Ga0207705_10125175 3300025909 Bacteria 1910
98 Ga0207684_10210320 3300025910 Bacteria 1678
99 Ga0207663_10010034 3300025916 Bacteria 5020
100 Ga0207662_10000845 3300025918 Bacteria 14113
101 Ga0207649_10035106 3300025920 Bacteria 3011
102 Ga0207646_10032182 3300025922 Bacteria 4747
103 Ga0207681_10015797 3300025923 Bacteria 4713
104 Ga0207650_10078465 3300025925 Bacteria 2498
105 Ga0207659_10093430 3300025926 Bacteria 2251
106 Ga0207700_10068599 3300025928 Bacteria 2719
107 Ga0207706_10205967 3300025933 Bacteria 1725
108 Ga0207709_10023084 3300025935 Bacteria 3537
109 Ga0207689_10155818 3300025942 Bacteria 1883
110 Ga0207651_10026251 3300025960 Bacteria 3635
111 Ga0207640_10115238 3300025981 Bacteria 1914
112 Ga0207640_10255927 3300025981 Unclassified 1361
113 Ga0207677_10331945 3300026023 Unclassified 1267
114 Ga0207708_10003328 3300026075 Bacteria 11835
115 Ga0207675_100001265 3300026118 Bacteria 25256
116 Ga0207675_100551618 3300026118 Unclassified 1152
117 Ga0207698_10181947 3300026142 Bacteria 1863
118 Ga0207428_10000555 3300027907 Bacteria 44135
119 Ga0207428_10026877 3300027907 Bacteria 4796
120 Ga0307513_10003141 3300031456 Bacteria 22564
121 Ga0307509_10016615 3300031507 Bacteria 8508
122 Ga0307508_10054272 3300031616 Bacteria 3554
123 Ga0307416_100551555 3300032002 Bacteria 1226
124 Ga0307415_100015369 3300032126 Bacteria 4531
125 Ga0373948_0000096 3300034817 Bacteria 9012
126 Ga0373959_0014954 3300034820 Bacteria 1419
127 Ga0373938_0007157 3300034957 Bacteria 1956
128 Ga0373929_0002126 3300035085 Bacteria 3685
129 Ga0373940_0000261 3300035088 Bacteria 7587
130 Ga0373949_0002123 3300035090 Bacteria 5212
131 Ga0373932_0000446 3300035112 Bacteria 12670
132 Ga0373939_0002829 3300035114 Bacteria 4073
133 Ga0373941_0003161 3300035115 Bacteria 3698
134 Ga0373960_0001844 3300035121 Bacteria 4737
135 Ga0373942_0000847 3300035207 Bacteria 8408
136 Ga0373961_0001631 3300035241 Bacteria 6315
137 Ga0373962_0000631 3300035242 Bacteria 7986
138 Ga0373931_0003868 3300035691 Bacteria 6771
139 Ga0436365_0678158 3300039437 Bacteria 6321
140 Ga0436361_0380720 3300039447 Bacteria 1577
141 Ga0451576_0005031 3300045051 Bacteria 16785
142 Ga0451576_0511690 3300045051 Bacteria 1261
143 Ga0495580_0045469 3300046472 Bacteria 3118
144 Ga0495609_0033533 3300046538 Bacteria 2331
145 Ga0495659_0005117 3300046664 Bacteria 4122
146 Ga0495674_0075707 3300047319 Bacteria 2896
147 Ga0495685_051258 3300047447 Bacteria 1400
148 Ga0495684_0027214 3300047471 Bacteria 4391
149 Ga0496104_0165001 3300048907 Bacteria 2124
150 Ga0496106_0350913 3300048909 Bacteria 1185
151 Ga0496106_0453131 3300048909 Unclassified 1031
152 Ga0496108_0304328 3300048911 Bacteria 1389
153 Ga0496109_0006093 3300048912 Bacteria 10128
154 Ga0501039_0112488 3300049575 Bacteria 2129
155 Ga0501075_0107668 3300049591 Unclassified 2119
156 Ga0501083_0024195 3300049744 Bacteria 4210
157 nmdc:mga05p37_250334_c1 3300050507 Unclassified 2125
158 nmdc:mga05p37_268378_c1 3300050507 Bacteria 2040
159 nmdc:mga05p37_400133_c1 3300050507 Bacteria 1603
160 nmdc:mga09592_1365_c1 3300050508 Bacteria 19537
161 nmdc:mga09592_355350_c1 3300050508 Unclassified 1268
162 nmdc:mga09592_578670_c1 3300050508 Bacteria 963
163 nmdc:mga0qj67_200664_c1 3300050509 Bacteria 1621
164 nmdc:mga0qj67_7753_c1 3300050509 Bacteria 7936
165 nmdc:mga0qj67_87988_c1 3300050509 Bacteria 2494
166 nmdc:mga06r32_13928_c1 3300050510 Bacteria 7296
167 nmdc:mga06r32_1619_c1 3300050510 Bacteria 20313
168 nmdc:mga06r32_180898_c1 3300050510 Bacteria 2094
169 nmdc:mga06r32_219216_c1 3300050510 Bacteria 1891
170 nmdc:mga06r32_666274_c1 3300050510 Unclassified 1008
171 nmdc:mga06r32_77076_c1 3300050510 Bacteria 3238
172 nmdc:mga08y16_123053_c1 3300050511 Bacteria 2699
173 nmdc:mga08y16_32823_c1 3300050511 Bacteria 5458
174 nmdc:mga08y16_73_c1 3300050511 Bacteria 84090
175 nmdc:mga0n895_162619_c1 3300050512 Bacteria 2264
176 nmdc:mga0n895_207827_c1 3300050512 Bacteria 1988
177 nmdc:mga0n895_377459_c1 3300050512 Bacteria 1435
178 nmdc:mga0n895_71182_c1 3300050512 Bacteria 3447
179 nmdc:mga0rr50_20113_c1 3300050513 Bacteria 4523
180 nmdc:mga0rr50_23242_c1 3300050513 Bacteria 4271
181 nmdc:mga0rr50_599_c1 3300050513 Bacteria 19337
182 nmdc:mga0rr50_66641_c1 3300050513 Bacteria 2732
183 nmdc:mga0a205_70881_c1 3300050515 Bacteria 3365
184 nmdc:mga0a205_76787_c1 3300050515 Bacteria 3228
185 nmdc:mga0a205_779636_c1 3300050515 Bacteria 804
186 Ga0495601_0047843 3300053077 Bacteria 2693
187 Ga0501084_0171250 3300054114 Bacteria 1833
188 Ga0530510_0136603 3300061734 Unclassified 1805
189 Ga0530510_0143818 3300061734 Bacteria 1758
190 2516087312 2515154202 Bacteria 5471270
191 2831937677 2831935698 Bacteria 5963223
192 2880490589 2880489317 Bacteria 7096270
193 8054733921 8054727385 Bacteria 7558670
194 8054735518 8054734606 Bacteria 6947278
195 Ga0070690_100040509
196 MBSR1b_contig_5694301
197 Ga0065712_10067780
198 Ga0065712_10077576
199 Ga0070658_10101324
200 Ga0070676_10003851
201 Ga0070670_100238322
202 Ga0070666_10044902
203 Ga0070660_100323564
204 Ga0070691_10005266
205 Ga0070687_100009867
206 Ga0070668_100159975
207 Ga0070669_100012753
208 Ga0070671_100006914
209 Ga0070671_100026481
210 Ga0070674_100010520
211 Ga0070688_100015778
212 Ga0070688_100022321
213 Ga0070709_10003100
214 Ga0070714_100249026
215 Ga0070713_100109417
216 Ga0070713_100134560
217 Ga0070710_10145774
218 Ga0070711_100076540
219 Ga0070705_100000757
220 Ga0070705_100003980
221 Ga0070705_100261242
222 Ga0070700_100036958
223 Ga0070694_100034549
224 Ga0070694_100090706
225 Ga0070662_100045778
226 Ga0068867_100003438
227 Ga0070685_10289815
228 Ga0070706_100434893
229 Ga0070707_100016619
230 Ga0070697_100289233
231 Ga0070672_100202835
232 Ga0070686_100001917
233 Ga0070695_100000360
234 Ga0070695_100210004
235 Ga0070695_100420977
236 Ga0070696_100032495
237 Ga0070696_100032783
238 Ga0070704_100034593
239 Ga0070664_100103912
240 Ga0068854_100003150
241 Ga0070702_100004172
242 Ga0070702_100034233
243 Ga0068852_100060130
244 Ga0068859_100449208
245 Ga0068864_100390819
246 Ga0068861_100002061
247 Ga0068863_100639104
248 Ga0068862_100140302
249 Ga0068862_100753586
250 Ga0081538_10004206
251 Ga0070712_100302847
252 Ga0068871_100399849
253 Ga0075428_100003955
254 Ga0075430_100032868
255 Ga0075430_100208378
256 Ga0075431_100001226
257 Ga0075431_100028621
258 Ga0075431_100181064
259 Ga0075433_10007037
260 Ga0075433_10058714
261 Ga0075434_100005579
262 Ga0075434_100044377
263 Ga0075434_100259139
264 Ga0075434_100416398
265 Ga0075429_100022864
266 Ga0075429_100107728
267 Ga0075429_100447538
268 Ga0075436_100023378
269 Ga0097620_100449193
270 Ga0075435_100000072
271 Ga0075435_100029342
272 Ga0075435_100037250
273 Ga0075435_100079037
274 Ga0075435_100080001
275 Ga0105240_10258860
276 Ga0111539_10000226
277 Ga0111539_10002499
278 Ga0111539_10496821
279 Ga0114129_10070730
280 Ga0114129_10091468
281 Ga0105243_10004930
282 Ga0105241_10080129
283 Ga0105248_10081088
284 Ga0105248_10466605
285 Ga0157376_10018074
286 Ga0207692_10104868
287 Ga0207688_10190162
288 Ga0207680_10052581
289 Ga0207699_10078584
290 Ga0207645_10001470
291 Ga0207705_10125175
292 Ga0207684_10210320
293 Ga0207663_10010034
294 Ga0207662_10000845
295 Ga0207649_10035106
296 Ga0207646_10032182
297 Ga0207681_10015797
298 Ga0207650_10078465
299 Ga0207659_10093430
300 Ga0207700_10068599
301 Ga0207706_10205967
302 Ga0207709_10023084
303 Ga0207689_10155818
304 Ga0207651_10026251
305 Ga0207640_10115238
306 Ga0207640_10255927
307 Ga0207677_10331945
308 Ga0207708_10003328
309 Ga0207675_100001265
310 Ga0207675_100551618
311 Ga0207698_10181947
312 Ga0207428_10000555
313 Ga0207428_10026877
314 Ga0307513_10003141
315 Ga0307509_10016615
316 Ga0307508_10054272
317 Ga0307416_100551555
318 Ga0307415_100015369
319 Ga0373948_0000096
320 Ga0373959_0014954
321 Ga0373938_0007157
322 Ga0373929_0002126
323 Ga0373940_0000261
324 Ga0373949_0002123
325 Ga0373932_0000446
326 Ga0373939_0002829
327 Ga0373941_0003161
328 Ga0373960_0001844
329 Ga0373942_0000847
330 Ga0373961_0001631
331 Ga0373962_0000631
332 Ga0373931_0003868
333 Ga0436365_0678158
334 Ga0436361_0380720
335 Ga0451576_0005031
336 Ga0451576_0511690
337 Ga0495580_0045469
338 Ga0495609_0033533
339 Ga0495659_0005117
340 Ga0495674_0075707
341 Ga0495685_051258
342 Ga0495684_0027214
343 Ga0496104_0165001
344 Ga0496106_0350913
345 Ga0496106_0453131
346 Ga0496108_0304328
347 Ga0496109_0006093
348 Ga0501039_0112488
349 Ga0501075_0107668
350 Ga0501083_0024195
351 nmdc:mga05p37_250334_c1
352 nmdc:mga05p37_268378_c1
353 nmdc:mga05p37_400133_c1
354 nmdc:mga09592_1365_c1
355 nmdc:mga09592_355350_c1
356 nmdc:mga09592_578670_c1
357 nmdc:mga0qj67_200664_c1
358 nmdc:mga0qj67_7753_c1
359 nmdc:mga0qj67_87988_c1
360 nmdc:mga06r32_13928_c1
361 nmdc:mga06r32_1619_c1
362 nmdc:mga06r32_180898_c1
363 nmdc:mga06r32_219216_c1
364 nmdc:mga06r32_666274_c1
365 nmdc:mga06r32_77076_c1
366 nmdc:mga08y16_123053_c1
367 nmdc:mga08y16_32823_c1
368 nmdc:mga08y16_73_c1
369 nmdc:mga0n895_162619_c1
370 nmdc:mga0n895_207827_c1
371 nmdc:mga0n895_377459_c1
372 nmdc:mga0n895_71182_c1
373 nmdc:mga0rr50_20113_c1
374 nmdc:mga0rr50_23242_c1
375 nmdc:mga0rr50_599_c1
376 nmdc:mga0rr50_66641_c1
377 nmdc:mga0a205_70881_c1
378 nmdc:mga0a205_76787_c1
379 nmdc:mga0a205_779636_c1
380 Ga0495601_0047843
381 Ga0501084_0171250
382 Ga0530510_0136603
383 Ga0530510_0143818
384 2516087312
385 2831937677
386 2880490589
387 8054733921
388 8054735518

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

36

124

0.9

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

36

128

0.89

PF13460

NAD_binding_10

NAD(P)H-binding

40

216

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l4l-assembly1.cif.gz_A polyketide ketoreductase simc7 - ternary complex with nadp+ and 7-oxo-sd8 0.9507 4 283
5l4l-assembly1.cif.gz_A polyketide ketoreductase simc7 - ternary complex with nadp+ and 7-oxo-sd8 0.9408 4 283
2jl1-assembly1.cif.gz_A-2 structural insight into bioremediation of triphenylmethane dyes by citrobacter sp. triphenylmethane reductase 0.8441 3 279
2vrb-assembly1.cif.gz_A-2 crystal structure of the citrobacter sp. triphenylmethane reductase complexed with nadp(h) 0.8427 4 279
2zcu-assembly1.cif.gz_A crystal structure of a new type of nadph-dependent quinone oxidoreductase (qor2) from escherichia coli 0.8413 4 277
ID Description Score Start End Superfamily
5l4lA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9507 4 283 3.40.50.720
5l4lA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9407 4 283 3.40.50.720
af_F4JRN8_123_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8844 3 67 3.40.50.720
af_A0A0P0VRA9_18_110_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8612 2 67 3.40.50.720
af_I1KVW6_141_273_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8484 2 88 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A6B1LPU8-F1-model_v4 deleted 0.9821 1 283
AF-A0A1Q7JYB7-F1-model_v4 NmrA family transcriptional regulator 0.9818 32 284
AF-A0A1Q7JYB7-F1-model_v4 NmrA family transcriptional regulator 0.9742 32 284
AF-A0A6B1LPU8-F1-model_v4 deleted 0.9587 1 283
AF-A0A2V9LLH8-F1-model_v4 NmrA family transcriptional regulator 0.9542 2 289

Map