F297784

General Info

Members Datasets Scaffolds Average Seq Length
193 150 386 291

Family's Representative Sequence

Representative Sequence 3300049589|Ga0501073_0093674|Ga0501073_0093674_52_1020
Length 322
Sequence MRRGLCSSSCALRTRRDDREPAMSPPPLDPRRNAYRADLAAETLRGRVEASRYVAGEPRQVVHSATPVRGGPNALGSWTTEALFGELVTVYEERDGWAWVQLQRDGYVGYMRSAALTAQVRAPTHRVKALGTSLYPAADIKASPWLPVSMNALLCVAELGQTFTRLADGSFVPTRHIVEMDRFAPDFVAVAERFMGVPYLWGGRSRLGLDCSGLVQVALHAAGIECPRDSDMQQAELGDAVEVSADLDGLLRGDLIFWKGHVGIMLDGFLMLHANAHHMGVVAELLSGAVDRIAHTGSTIAAIKRLPRKAVSPSTADTVGGD

Samples

Sample ID Description Type Environment
1 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
92 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
93 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
94 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
95 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
103 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
150 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.96
Metatranscriptomes 0
Isolates 1.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.81
Nodule 0
Rhizoplane 9.84
Rhizosphere 78.76
Stem 0
Stem Tuber 0
Unclassified 1.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501073_0093674 3300049589 Bacteria 2087
2 Ga0070690_100096580 3300005330 Bacteria 1953
3 Ga0070680_100002279 3300005336 Bacteria 14192
4 Ga0070682_100054355 3300005337 Bacteria 2512
5 Ga0070660_100116898 3300005339 Bacteria 2126
6 Ga0070689_100259081 3300005340 Bacteria 1437
7 Ga0070691_10047224 3300005341 Bacteria 2047
8 Ga0070691_10088328 3300005341 Bacteria 1526
9 Ga0070661_100058176 3300005344 Bacteria 2832
10 Ga0070668_100083264 3300005347 Bacteria 2511
11 Ga0070675_100225794 3300005354 Bacteria 1632
12 Ga0070659_100021433 3300005366 Bacteria 4922
13 Ga0070713_100036029 3300005436 Bacteria 3989
14 Ga0070701_10029085 3300005438 Bacteria 2722
15 Ga0070705_100000065 3300005440 Bacteria 55736
16 Ga0070705_100067708 3300005440 Bacteria 2146
17 Ga0070705_100115138 3300005440 Bacteria 1726
18 Ga0070700_100000602 3300005441 Bacteria 17947
19 Ga0070694_100006542 3300005444 Bacteria 7077
20 Ga0070708_100051407 3300005445 Bacteria 3652
21 Ga0070663_100001781 3300005455 Bacteria 11977
22 Ga0070678_100035254 3300005456 Bacteria 3491
23 Ga0070662_100170026 3300005457 Bacteria 1711
24 Ga0070681_10003177 3300005458 Bacteria 15295
25 Ga0070681_10005985 3300005458 Bacteria 11786
26 Ga0068867_100205340 3300005459 Bacteria 1579
27 Ga0070707_100707760 3300005468 Bacteria 970
28 Ga0070699_100006725 3300005518 Bacteria 9998
29 Ga0070679_100032459 3300005530 Bacteria 5165
30 Ga0070697_100002031 3300005536 Bacteria 15489
31 Ga0070697_100012513 3300005536 Bacteria 6648
32 Ga0070695_100001991 3300005545 Bacteria 11624
33 Ga0070695_100003421 3300005545 Bacteria 9275
34 Ga0070695_100005158 3300005545 Bacteria 7705
35 Ga0070695_100030306 3300005545 Bacteria 3368
36 Ga0070696_100000340 3300005546 Bacteria 28341
37 Ga0070696_100006841 3300005546 Bacteria 7612
38 Ga0070693_100003053 3300005547 Bacteria 7768
39 Ga0070704_100001332 3300005549 Bacteria 13088
40 Ga0070704_100126923 3300005549 Bacteria 1970
41 Ga0070664_100076695 3300005564 Bacteria 2873
42 Ga0068857_100112824 3300005577 Bacteria 2444
43 Ga0070702_100010609 3300005615 Bacteria 4546
44 Ga0070702_100046878 3300005615 Bacteria 2452
45 Ga0068859_100003327 3300005617 Bacteria 16343
46 Ga0068860_100001455 3300005843 Bacteria 25612
47 Ga0068862_100001016 3300005844 Bacteria 26969
48 Ga0081455_10000689 3300005937 Bacteria 43834
49 Ga0081540_1000606 3300005983 Bacteria 34167
50 Ga0070717_10026312 3300006028 Bacteria 4640
51 Ga0075368_10150765 3300006042 Unclassified 971
52 Ga0075363_100024112 3300006048 Bacteria 3090
53 Ga0075363_100030293 3300006048 Bacteria 2800
54 Ga0075364_10047467 3300006051 Bacteria 2797
55 Ga0070716_100308177 3300006173 Bacteria 1104
56 Ga0075367_10072380 3300006178 Bacteria 2075
57 Ga0075428_100375415 3300006844 Bacteria 1524
58 Ga0075428_100375729 3300006844 Bacteria 1524
59 Ga0075428_100377413 3300006844 Bacteria 1520
60 Ga0075431_100013062 3300006847 Bacteria 8387
61 Ga0075431_100024809 3300006847 Bacteria 6148
62 Ga0075431_100192600 3300006847 Bacteria 2089
63 Ga0075433_10151241 3300006852 Bacteria 2065
64 Ga0075434_100461254 3300006871 Bacteria 1292
65 Ga0075429_100164724 3300006880 Bacteria 1942
66 Ga0075436_100001182 3300006914 Bacteria 17721
67 Ga0097620_100003327 3300006931 Bacteria 16343
68 Ga0075435_100027208 3300007076 Bacteria 4470
69 Ga0105240_10470457 3300009093 Bacteria 1403
70 Ga0111539_10021788 3300009094 Bacteria 7878
71 Ga0111539_10062950 3300009094 Bacteria 4390
72 Ga0114129_10311440 3300009147 Bacteria 2095
73 Ga0114129_10334439 3300009147 Bacteria 2010
74 Ga0114129_10409028 3300009147 Unclassified 1787
75 Ga0114129_10603916 3300009147 Bacteria 1421
76 Ga0105243_10011465 3300009148 Bacteria 6706
77 Ga0105241_10234127 3300009174 Bacteria 1549
78 Ga0105241_10356726 3300009174 Bacteria 1271
79 Ga0105242_10070395 3300009176 Bacteria 2900
80 Ga0105238_10012412 3300009551 Bacteria 8592
81 Ga0105249_10018464 3300009553 Bacteria 6206
82 Ga0105239_10035327 3300010375 Bacteria 5489
83 Ga0105246_10007606 3300011119 Bacteria 6646
84 Ga0105246_10052598 3300011119 Bacteria 2800
85 Ga0157369_10422602 3300013105 Bacteria 1382
86 Ga0157380_10018969 3300014326 Bacteria 5119
87 Ga0157380_10158778 3300014326 Bacteria 1963
88 Ga0157380_10638574 3300014326 Bacteria 1060
89 Ga0157379_10069617 3300014968 Bacteria 3147
90 Ga0207653_10001021 3300025885 Bacteria 9223
91 Ga0207654_10180473 3300025911 Bacteria 1377
92 Ga0207707_10016105 3300025912 Bacteria 6519
93 Ga0207660_10008899 3300025917 Bacteria 6491
94 Ga0207657_10113667 3300025919 Bacteria 2233
95 Ga0207652_10020214 3300025921 Bacteria 5482
96 Ga0207681_10478609 3300025923 Bacteria 1017
97 Ga0207659_10199600 3300025926 Bacteria 1597
98 Ga0207706_10074963 3300025933 Bacteria 2975
99 Ga0207706_10225967 3300025933 Bacteria 1638
100 Ga0207665_10285403 3300025939 Bacteria 1230
101 Ga0207661_10059693 3300025944 Bacteria 3075
102 Ga0207712_10009446 3300025961 Bacteria 6172
103 Ga0207668_10008005 3300025972 Bacteria 6290
104 Ga0207658_10023974 3300025986 Bacteria 4264
105 Ga0207678_10000184 3300026067 Bacteria 53471
106 Ga0207678_10005569 3300026067 Bacteria 11259
107 Ga0207708_10000470 3300026075 Bacteria 31135
108 Ga0207708_10034509 3300026075 Bacteria 3847
109 Ga0207676_10074488 3300026095 Bacteria 2735
110 Ga0207674_10002013 3300026116 Bacteria 25816
111 Ga0207675_100066302 3300026118 Bacteria 3374
112 Ga0209813_10019416 3300027866 Bacteria 1889
113 Ga0209813_10019419 3300027866 Bacteria 1889
114 Ga0207428_10024099 3300027907 Bacteria 5110
115 Ga0268265_10019693 3300028380 Bacteria 4697
116 Ga0268265_10526638 3300028380 Bacteria 1118
117 Ga0268264_10001700 3300028381 Bacteria 20270
118 Ga0307416_100239790 3300032002 Bacteria 1756
119 Ga0307415_100473137 3300032126 Bacteria 1089
120 Ga0373958_0004139 3300034819 Bacteria 2132
121 Ga0373929_0005349 3300035085 Bacteria 2308
122 Ga0373942_0012130 3300035207 Bacteria 2053
123 Ga0373961_0013771 3300035241 Bacteria 2044
124 Ga0373962_0009501 3300035242 Bacteria 2411
125 Ga0316574_0037441 3300035398 Bacteria 2975
126 Ga0373931_0001035 3300035691 Bacteria 11766
127 Ga0395898_0009761 3300037466 Bacteria 10058
128 Ga0400486_10731 3300038742 Bacteria 1850
129 Ga0400486_18925 3300038742 Bacteria 4909
130 Ga0436360_0106471 3300039438 Bacteria 3630
131 Ga0436361_0570954 3300039447 Bacteria 1633
132 Ga0436361_0763206 3300039447 Bacteria 963
133 Ga0451833_0409069 3300041491 Bacteria 2303
134 Ga0439464_0081219 3300042439 Bacteria 968
135 Ga0495652_0068877 3300046529 Bacteria 2963
136 Ga0495667_0053008 3300046559 Bacteria 2672
137 Ga0495668_0333796 3300046616 Bacteria 832
138 Ga0495686_0090607 3300047472 Bacteria 1857
139 Ga0495602_0057791 3300048088 Bacteria 3400
140 Ga0496100_0054316 3300048903 Bacteria 2612
141 Ga0496101_0023894 3300048904 Bacteria 4226
142 Ga0496102_0001438 3300048905 Bacteria 21115
143 Ga0496102_0171584 3300048905 Bacteria 2042
144 Ga0496103_0007831 3300048906 Bacteria 6349
145 Ga0496103_0011236 3300048906 Bacteria 5303
146 Ga0496104_0000360 3300048907 Bacteria 40585
147 Ga0496104_0056262 3300048907 Bacteria 3719
148 Ga0496105_0059147 3300048908 Bacteria 3162
149 Ga0496106_0001814 3300048909 Bacteria 15958
150 Ga0496106_0004955 3300048909 Bacteria 9851
151 Ga0496107_0006993 3300048910 Bacteria 7774
152 Ga0496107_0008348 3300048910 Bacteria 7166
153 Ga0496108_0031629 3300048911 Bacteria 4392
154 Ga0496110_0003669 3300048913 Bacteria 11815
155 Ga0496111_0000814 3300048914 Bacteria 16735
156 Ga0496113_0068543 3300048916 Bacteria 2692
157 Ga0496115_0009126 3300048918 Bacteria 7361
158 Ga0496115_0024216 3300048918 Bacteria 4716
159 Ga0501032_0000844 3300049569 Bacteria 24890
160 Ga0501034_0058037 3300049571 Bacteria 3891
161 Ga0501043_0152133 3300049579 Bacteria 1811
162 Ga0501048_0002113 3300049582 Bacteria 15149
163 Ga0501070_0194399 3300049586 Bacteria 1667
164 Ga0501077_0094815 3300049593 Bacteria 1892
165 Ga0501079_0075301 3300049741 Bacteria 2610
166 Ga0501080_0480696 3300049742 Bacteria 1111
167 Ga0501044_0314725 3300049823 Bacteria 1491
168 Ga0501044_0524415 3300049823 Bacteria 1084
169 Ga0501045_0347062 3300049824 Bacteria 1105
170 nmdc:mga03n38_67527_c1 3300050490 Bacteria 1646
171 nmdc:mga00v17_12436_c1 3300050491 Bacteria 4697
172 nmdc:mga06z11_10675_c1 3300050494 Bacteria 3925
173 nmdc:mga04h51_19116_c1 3300050495 Bacteria 2028
174 nmdc:mga05p37_253370_c1 3300050507 Unclassified 2110
175 nmdc:mga05p37_411349_c1 3300050507 Bacteria 1577
176 nmdc:mga05p37_81767_c1 3300050507 Bacteria 3979
177 nmdc:mga09592_26992_c1 3300050508 Bacteria 4761
178 nmdc:mga06r32_53510_c1 3300050510 Bacteria 3867
179 nmdc:mga08y16_282248_c1 3300050511 Bacteria 1713
180 nmdc:mga0rr50_19461_c1 3300050513 Bacteria 4583
181 nmdc:mga08x19_21_c1 3300050514 Bacteria 302369
182 nmdc:mga0a205_325862_c1 3300050515 Bacteria 1406
183 Ga0495601_0025164 3300053077 Bacteria 3669
184 Ga0495595_0054570 3300053084 Bacteria 1858
185 Ga0500556_0000213 3300053104 Bacteria 47380
186 Ga0500556_0067569 3300053104 Bacteria 1330
187 Ga0500595_016518 3300053119 Bacteria 2748
188 Ga0500616_0001726 3300053153 Bacteria 20045
189 Ga0500616_0009147 3300053153 Bacteria 6052
190 Ga0500616_0039658 3300053153 Bacteria 2538
191 Ga0501082_0300943 3300060353 Bacteria 1397
192 2894817406 2894817345 Bacteria 4892941
193 8054564355 8054563764 Bacteria 5592885
194 Ga0501073_0093674
195 Ga0070690_100096580
196 Ga0070680_100002279
197 Ga0070682_100054355
198 Ga0070660_100116898
199 Ga0070689_100259081
200 Ga0070691_10047224
201 Ga0070691_10088328
202 Ga0070661_100058176
203 Ga0070668_100083264
204 Ga0070675_100225794
205 Ga0070659_100021433
206 Ga0070713_100036029
207 Ga0070701_10029085
208 Ga0070705_100000065
209 Ga0070705_100067708
210 Ga0070705_100115138
211 Ga0070700_100000602
212 Ga0070694_100006542
213 Ga0070708_100051407
214 Ga0070663_100001781
215 Ga0070678_100035254
216 Ga0070662_100170026
217 Ga0070681_10003177
218 Ga0070681_10005985
219 Ga0068867_100205340
220 Ga0070707_100707760
221 Ga0070699_100006725
222 Ga0070679_100032459
223 Ga0070697_100002031
224 Ga0070697_100012513
225 Ga0070695_100001991
226 Ga0070695_100003421
227 Ga0070695_100005158
228 Ga0070695_100030306
229 Ga0070696_100000340
230 Ga0070696_100006841
231 Ga0070693_100003053
232 Ga0070704_100001332
233 Ga0070704_100126923
234 Ga0070664_100076695
235 Ga0068857_100112824
236 Ga0070702_100010609
237 Ga0070702_100046878
238 Ga0068859_100003327
239 Ga0068860_100001455
240 Ga0068862_100001016
241 Ga0081455_10000689
242 Ga0081540_1000606
243 Ga0070717_10026312
244 Ga0075368_10150765
245 Ga0075363_100024112
246 Ga0075363_100030293
247 Ga0075364_10047467
248 Ga0070716_100308177
249 Ga0075367_10072380
250 Ga0075428_100375415
251 Ga0075428_100375729
252 Ga0075428_100377413
253 Ga0075431_100013062
254 Ga0075431_100024809
255 Ga0075431_100192600
256 Ga0075433_10151241
257 Ga0075434_100461254
258 Ga0075429_100164724
259 Ga0075436_100001182
260 Ga0097620_100003327
261 Ga0075435_100027208
262 Ga0105240_10470457
263 Ga0111539_10021788
264 Ga0111539_10062950
265 Ga0114129_10311440
266 Ga0114129_10334439
267 Ga0114129_10409028
268 Ga0114129_10603916
269 Ga0105243_10011465
270 Ga0105241_10234127
271 Ga0105241_10356726
272 Ga0105242_10070395
273 Ga0105238_10012412
274 Ga0105249_10018464
275 Ga0105239_10035327
276 Ga0105246_10007606
277 Ga0105246_10052598
278 Ga0157369_10422602
279 Ga0157380_10018969
280 Ga0157380_10158778
281 Ga0157380_10638574
282 Ga0157379_10069617
283 Ga0207653_10001021
284 Ga0207654_10180473
285 Ga0207707_10016105
286 Ga0207660_10008899
287 Ga0207657_10113667
288 Ga0207652_10020214
289 Ga0207681_10478609
290 Ga0207659_10199600
291 Ga0207706_10074963
292 Ga0207706_10225967
293 Ga0207665_10285403
294 Ga0207661_10059693
295 Ga0207712_10009446
296 Ga0207668_10008005
297 Ga0207658_10023974
298 Ga0207678_10000184
299 Ga0207678_10005569
300 Ga0207708_10000470
301 Ga0207708_10034509
302 Ga0207676_10074488
303 Ga0207674_10002013
304 Ga0207675_100066302
305 Ga0209813_10019416
306 Ga0209813_10019419
307 Ga0207428_10024099
308 Ga0268265_10019693
309 Ga0268265_10526638
310 Ga0268264_10001700
311 Ga0307416_100239790
312 Ga0307415_100473137
313 Ga0373958_0004139
314 Ga0373929_0005349
315 Ga0373942_0012130
316 Ga0373961_0013771
317 Ga0373962_0009501
318 Ga0316574_0037441
319 Ga0373931_0001035
320 Ga0395898_0009761
321 Ga0400486_10731
322 Ga0400486_18925
323 Ga0436360_0106471
324 Ga0436361_0570954
325 Ga0436361_0763206
326 Ga0451833_0409069
327 Ga0439464_0081219
328 Ga0495652_0068877
329 Ga0495667_0053008
330 Ga0495668_0333796
331 Ga0495686_0090607
332 Ga0495602_0057791
333 Ga0496100_0054316
334 Ga0496101_0023894
335 Ga0496102_0001438
336 Ga0496102_0171584
337 Ga0496103_0007831
338 Ga0496103_0011236
339 Ga0496104_0000360
340 Ga0496104_0056262
341 Ga0496105_0059147
342 Ga0496106_0001814
343 Ga0496106_0004955
344 Ga0496107_0006993
345 Ga0496107_0008348
346 Ga0496108_0031629
347 Ga0496110_0003669
348 Ga0496111_0000814
349 Ga0496113_0068543
350 Ga0496115_0009126
351 Ga0496115_0024216
352 Ga0501032_0000844
353 Ga0501034_0058037
354 Ga0501043_0152133
355 Ga0501048_0002113
356 Ga0501070_0194399
357 Ga0501077_0094815
358 Ga0501079_0075301
359 Ga0501080_0480696
360 Ga0501044_0314725
361 Ga0501044_0524415
362 Ga0501045_0347062
363 nmdc:mga03n38_67527_c1
364 nmdc:mga00v17_12436_c1
365 nmdc:mga06z11_10675_c1
366 nmdc:mga04h51_19116_c1
367 nmdc:mga05p37_253370_c1
368 nmdc:mga05p37_411349_c1
369 nmdc:mga05p37_81767_c1
370 nmdc:mga09592_26992_c1
371 nmdc:mga06r32_53510_c1
372 nmdc:mga08y16_282248_c1
373 nmdc:mga0rr50_19461_c1
374 nmdc:mga08x19_21_c1
375 nmdc:mga0a205_325862_c1
376 Ga0495601_0025164
377 Ga0495595_0054570
378 Ga0500556_0000213
379 Ga0500556_0067569
380 Ga0500595_016518
381 Ga0500616_0001726
382 Ga0500616_0009147
383 Ga0500616_0039658
384 Ga0501082_0300943
385 2894817406
386 8054564355

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18348

SH3_16

Bacterial dipeptidyl-peptidase Sh3 domain

68

116

0.9

PF00877

NLPC_P60

NlpC/P60 family

196

295

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pvq-assembly1.cif.gz_B crystal structure of a putative dipeptidyl-peptidase vi (bt_1314) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution 0.8728 34 283
4r0k-assembly1.cif.gz_A crystal structure of a putative dipeptidyl-peptidase vi (bt_1314) from bacteroides thetaiotaomicron vpi-5482 at 1.75 a resolution 0.8669 33 283
5nuh-assembly2.cif.gz_C crystal structure of sivmac239 nef bound to an engineered hck sh3 domain 0.8518 35 94
2krs-assembly1.cif.gz_A solution nmr structure of sh3 domain from cpf_0587 (fragment 415-479) from clostridium perfringens. northeast structural genomics consortium (nesg) target cpr74a. 0.8474 35 94
3npf-assembly1.cif.gz_B crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612) from bacteroides ovatus at 1.72 a resolution 0.8425 32 283
ID Description Score Start End Superfamily
af_F1LZ81_1_54_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.937 58 94 2.30.30.40
4m4zA01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.9324 58 94 2.30.30.40
af_Q54BX0_18_174_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8803 162 262 3.90.1720.10
af_C6KSV4_866_930_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.8742 33 94 2.30.30.30
4krtB03 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8675 35 94 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A2P5KW31-F1-model_v4 Peptidase P60 0.993 2 283 GO:0008234
AF-A0A537R4G6-F1-model_v4 NlpC/P60 family protein 0.99 2 220 GO:0008234
AF-A0A532B5M1-F1-model_v4 SH3 domain-containing protein 0.9893 4 94
AF-A0A2D7Z6Y0-F1-model_v4 Hydrolase Nlp/P60 0.9884 2 88 GO:0016787
AF-A0A1E4C6K8-F1-model_v4 NlpC/P60 domain-containing protein 0.9883 3 285 GO:0008234

Map