F297334

General Info

Members Datasets Scaffolds Average Seq Length
193 122 386 492

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10084725|Ga0265338_100847252
Length 536
Sequence MHSVLDPILNYIHGDGLVILPQMELLLFALGILIFDFLLEKREKHFNAYLALTGVFAGALGLYQQYKKVAAAMENPTGAAPVLGFQGSVIIDGFSLIFGIIFLAATALVILLSIRYMQIERETEGEYYALILLAAIGMMFMASGMDIVVMFLGLETMALSFYVLVGFLRREKRSNEAAMKYLLLGAFSTGILTYGFSFLYGISGSTNIANISTALDHRNGLTHALAVSRQAGAAGDQMRQLLAERLPAALHLDPYLIQILPLLAFVLVAAGMFFKVAAVPFHQWAPDVYEGAPTPISAYVSVASKTASFAMFIRLLTVFSPSAQPPSWLYLIAGVAIASLTWGNIAALTQTNVKRLLAYSSISHVGYILLGIVAWNETGLIGIFYYLIAYAFMTIGAFAILIVLHQRGLIGDELSDLDGLYQRSPAAALLLLVFMLSLAGIPPTAGFMGKYFIFQALIQSNHWILAIFAALYIVPAVFYYFRVIVHAWLKKPGEDVSVPLLTSAQILALVITVFVTLAAGLYPQPFTYLARYALGQ

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
45 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
46 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
71 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
72 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
122 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.96
Metatranscriptomes 0.52
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.04
Rhizosphere 97.93
Stem 0
Stem Tuber 0
Unclassified 2.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10084725 3300028800 Bacteria 2645
2 LJNas_1001404 3300000546 Bacteria 3461
3 rootL2_10161722 3300003322 Bacteria 1771
4 Ga0070658_10097217 3300005327 Bacteria 2431
5 Ga0070676_10046624 3300005328 Bacteria 2528
6 Ga0070683_100258306 3300005329 Bacteria 1657
7 Ga0070666_10057878 3300005335 Bacteria 2620
8 Ga0068868_100088692 3300005338 Bacteria 2489
9 Ga0070671_100104225 3300005355 Bacteria 2380
10 Ga0070659_100069708 3300005366 Bacteria 2792
11 Ga0070709_10000266 3300005434 Bacteria 33494
12 Ga0070709_10018661 3300005434 Bacteria 4000
13 Ga0070714_100078920 3300005435 Bacteria 2862
14 Ga0070714_100166249 3300005435 Bacteria 1999
15 Ga0070713_100000051 3300005436 Bacteria 73697
16 Ga0070713_100000084 3300005436 Bacteria 59438
17 Ga0070713_100008927 3300005436 Bacteria 7141
18 Ga0070713_100009137 3300005436 Bacteria 7072
19 Ga0070713_100022265 3300005436 Bacteria 4895
20 Ga0070713_100034055 3300005436 Bacteria 4087
21 Ga0070710_10004210 3300005437 Bacteria 6820
22 Ga0070711_100025786 3300005439 Bacteria 3848
23 Ga0070711_100080766 3300005439 Bacteria 2316
24 Ga0070708_100000408 3300005445 Bacteria 32333
25 Ga0070708_100073767 3300005445 Bacteria 3076
26 Ga0070708_100171919 3300005445 Bacteria 2023
27 Ga0070681_10047437 3300005458 Bacteria 4294
28 Ga0070706_100002694 3300005467 Bacteria 17788
29 Ga0070706_100075542 3300005467 Bacteria 3118
30 Ga0070706_100119893 3300005467 Bacteria 2452
31 Ga0070706_100161267 3300005467 Bacteria 2094
32 Ga0070707_100002073 3300005468 Bacteria 19236
33 Ga0070707_100012357 3300005468 Bacteria 7973
34 Ga0070699_100000383 3300005518 Bacteria 43029
35 Ga0070699_100015685 3300005518 Bacteria 6506
36 Ga0070697_100000040 3300005536 Bacteria 95188
37 Ga0070697_100000106 3300005536 Bacteria 65504
38 Ga0070697_100049839 3300005536 Bacteria 3398
39 Ga0068855_100220523 3300005563 Unclassified 2127
40 Ga0068856_100001473 3300005614 Bacteria 24654
41 Ga0068859_100101039 3300005617 Bacteria 2940
42 Ga0068858_100001985 3300005842 Bacteria 20901
43 Ga0068860_100008068 3300005843 Bacteria 10492
44 Ga0068862_100065114 3300005844 Unclassified 3139
45 Ga0070717_10003403 3300006028 Bacteria 11381
46 Ga0070717_10005354 3300006028 Bacteria 9359
47 Ga0070717_10057636 3300006028 Bacteria 3212
48 Ga0070716_100001513 3300006173 Bacteria 10394
49 Ga0070716_100002293 3300006173 Bacteria 8807
50 Ga0070712_100000011 3300006175 Bacteria 127295
51 Ga0070712_100000168 3300006175 Bacteria 35814
52 Ga0070712_100003982 3300006175 Bacteria 9082
53 Ga0070712_100007919 3300006175 Bacteria 6662
54 Ga0070712_100073098 3300006175 Bacteria 2458
55 Ga0068865_100004188 3300006881 Bacteria 8690
56 Ga0068865_100016355 3300006881 Bacteria 4746
57 Ga0075436_100000881 3300006914 Bacteria 19914
58 Ga0075436_100005117 3300006914 Bacteria 9026
59 Ga0097620_100101042 3300006931 Bacteria 2940
60 Ga0105240_10117567 3300009093 Bacteria 3205
61 Ga0105242_10125855 3300009176 Bacteria 2205
62 Ga0105237_10027592 3300009545 Bacteria 5793
63 Ga0105239_10021927 3300010375 Bacteria 7041
64 Ga0157371_10043246 3300013102 Bacteria 3209
65 Ga0157374_10007561 3300013296 Bacteria 9274
66 Ga0157372_10026003 3300013307 Bacteria 6366
67 Ga0157375_10008206 3300013308 Bacteria 9141
68 Ga0157375_10025102 3300013308 Bacteria 5529
69 Ga0157375_10037046 3300013308 Bacteria 4670
70 Ga0157375_10107555 3300013308 Bacteria 2882
71 Ga0163163_10087997 3300014325 Bacteria 3117
72 Ga0157379_10042725 3300014968 Unclassified 4047
73 Ga0224570_100185 3300022730 Bacteria 4341
74 Ga0224569_100945 3300022732 Unclassified 2461
75 Ga0228598_1001843 3300024227 Bacteria 4616
76 Ga0228598_1002315 3300024227 Bacteria 4166
77 Ga0207692_10001298 3300025898 Bacteria 9300
78 Ga0207692_10011688 3300025898 Bacteria 3747
79 Ga0207642_10015928 3300025899 Bacteria 2817
80 Ga0207647_10015540 3300025904 Bacteria 5215
81 Ga0207699_10000153 3300025906 Bacteria 44112
82 Ga0207699_10010745 3300025906 Bacteria 4605
83 Ga0207684_10000132 3300025910 Bacteria 134931
84 Ga0207684_10234737 3300025910 Bacteria 1582
85 Ga0207707_10105424 3300025912 Bacteria 2464
86 Ga0207693_10000008 3300025915 Bacteria 171049
87 Ga0207693_10000033 3300025915 Bacteria 114840
88 Ga0207693_10008525 3300025915 Bacteria 8390
89 Ga0207693_10013020 3300025915 Bacteria 6712
90 Ga0207693_10036002 3300025915 Bacteria 3900
91 Ga0207663_10006840 3300025916 Bacteria 5870
92 Ga0207663_10018300 3300025916 Bacteria 3924
93 Ga0207663_10022792 3300025916 Bacteria 3585
94 Ga0207663_10142792 3300025916 Bacteria 1670
95 Ga0207646_10000795 3300025922 Bacteria 41073
96 Ga0207646_10114367 3300025922 Bacteria 2423
97 Ga0207700_10000181 3300025928 Bacteria 37865
98 Ga0207700_10000282 3300025928 Bacteria 30196
99 Ga0207700_10009726 3300025928 Bacteria 6026
100 Ga0207700_10016907 3300025928 Bacteria 4857
101 Ga0207700_10025240 3300025928 Bacteria 4125
102 Ga0207664_10017778 3300025929 Bacteria 5223
103 Ga0207664_10118947 3300025929 Bacteria 2208
104 Ga0207686_10043607 3300025934 Bacteria 2750
105 Ga0207704_10004360 3300025938 Bacteria 6471
106 Ga0207704_10043287 3300025938 Bacteria 2657
107 Ga0207665_10001754 3300025939 Bacteria 14559
108 Ga0207665_10016115 3300025939 Bacteria 4907
109 Ga0207665_10069683 3300025939 Bacteria 2398
110 Ga0207689_10000087 3300025942 Bacteria 74575
111 Ga0207677_10016843 3300026023 Bacteria 4341
112 Ga0207703_10002474 3300026035 Bacteria 16022
113 Ga0207702_10000913 3300026078 Bacteria 30558
114 Ga0207641_10047937 3300026088 Bacteria 3605
115 Ga0207641_10117994 3300026088 Bacteria 2363
116 Ga0207676_10001165 3300026095 Bacteria 19779
117 Ga0207675_100005915 3300026118 Bacteria 11673
118 Ga0265356_1000018 3300028017 Bacteria 26244
119 Ga0268266_10095611 3300028379 Bacteria 2610
120 Ga0265323_10000251 3300028653 Bacteria 31563
121 Ga0265323_10010849 3300028653 Bacteria 3689
122 Ga0265336_10030542 3300028666 Bacteria 1678
123 Ga0265338_10001717 3300028800 Bacteria 34748
124 Ga0265338_10003060 3300028800 Bacteria 24040
125 Ga0265338_10007796 3300028800 Bacteria 13165
126 Ga0265760_10000041 3300031090 Bacteria 38626
127 Ga0265330_10058216 3300031235 Bacteria 1685
128 Ga0265332_10003660 3300031238 Bacteria 7360
129 Ga0265328_10005594 3300031239 Bacteria 5372
130 Ga0265328_10008049 3300031239 Bacteria 4368
131 Ga0265320_10000436 3300031240 Bacteria 32831
132 Ga0265340_10007614 3300031247 Bacteria 5876
133 Ga0265331_10007199 3300031250 Bacteria 6464
134 Ga0265316_10000185 3300031344 Bacteria 71392
135 Ga0265316_10000723 3300031344 Bacteria 36403
136 Ga0265316_10003118 3300031344 Bacteria 16902
137 Ga0265316_10010403 3300031344 Bacteria 8481
138 Ga0265316_10011157 3300031344 Bacteria 8130
139 Ga0265316_10011567 3300031344 Bacteria 7947
140 Ga0265316_10014721 3300031344 Bacteria 6868
141 Ga0265316_10037177 3300031344 Bacteria 3932
142 Ga0265316_10059929 3300031344 Bacteria 2959
143 Ga0265316_10114982 3300031344 Bacteria 2035
144 Ga0265314_10027062 3300031711 Bacteria 4299
145 Ga0265314_10027151 3300031711 Bacteria 4290
146 Ga0373936_0011101 3300035113 Bacteria 3404
147 Ga0373943_0064619 3300035170 Bacteria 1838
148 Ga0373935_0007611 3300035692 Bacteria 6488
149 Ga0373947_0035129 3300035725 Bacteria 2967
150 Ga0373937_0006618 3300036401 Bacteria 10004
151 Ga0373937_0031972 3300036401 Bacteria 4771
152 Ga0373925_0006920 3300037068 Bacteria 8295
153 Ga0395905_0188459 3300037471 Bacteria 1936
154 Ga0436363_0320420 3300039450 Bacteria 3066
155 Ga0436362_0964998 3300039453 Unclassified 3090
156 Ga0451577_0034941 3300042876 Bacteria 4529
157 Ga0453684_0036234 3300044712 Bacteria 6801
158 Ga0453684_0036647 3300044712 Bacteria 6754
159 Ga0451576_0009220 3300045051 Bacteria 11467
160 Ga0451576_0217180 3300045051 Bacteria 1997
161 Ga0495651_0096112 3300046462 Bacteria 2214
162 Ga0495580_0000175 3300046472 Bacteria 47861
163 Ga0495580_0001578 3300046472 Bacteria 20022
164 Ga0495582_0005080 3300046473 Bacteria 7369
165 Ga0495662_0032838 3300046476 Bacteria 2507
166 Ga0495618_0069381 3300046514 Bacteria 2241
167 Ga0495630_0072748 3300046517 Bacteria 2588
168 Ga0495586_0045964 3300046535 Bacteria 2354
169 Ga0495645_0014560 3300046543 Bacteria 5583
170 Ga0495645_0027216 3300046543 Bacteria 4153
171 Ga0495599_0013486 3300046678 Bacteria 5049
172 Ga0495658_0021829 3300046683 Bacteria 3380
173 Ga0495669_0030622 3300046684 Bacteria 2362
174 Ga0495674_0016980 3300047319 Bacteria 6784
175 Ga0495680_0030726 3300047322 Bacteria 4382
176 Ga0495602_0110496 3300048088 Bacteria 2234
177 Ga0496112_0004410 3300048915 Bacteria 11911
178 Ga0496115_0069363 3300048918 Bacteria 2855
179 Ga0501036_0005175 3300049572 Bacteria 10546
180 Ga0501038_0027108 3300049574 Bacteria 5100
181 Ga0501039_0060775 3300049575 Bacteria 2926
182 Ga0501067_0003233 3300049583 Bacteria 8973
183 Ga0501068_0051510 3300049584 Bacteria 2490
184 Ga0501070_0006179 3300049586 Bacteria 10205
185 Ga0501074_0023552 3300049590 Bacteria 4475
186 Ga0501257_007950 3300049686 Bacteria 2376
187 Ga0501079_0029757 3300049741 Bacteria 4194
188 Ga0501080_0063003 3300049742 Bacteria 3451
189 Ga0501044_0001663 3300049823 Bacteria 26095
190 Ga0501045_0201390 3300049824 Bacteria 1483
191 nmdc:mga08x19_29356_c1 3300050514 Bacteria 3449
192 nmdc:mga08x19_6640_c1 3300050514 Bacteria 6863
193 2522553643 2522125168 Bacteria 7376607
194 Ga0265338_10084725
195 LJNas_1001404
196 rootL2_10161722
197 Ga0070658_10097217
198 Ga0070676_10046624
199 Ga0070683_100258306
200 Ga0070666_10057878
201 Ga0068868_100088692
202 Ga0070671_100104225
203 Ga0070659_100069708
204 Ga0070709_10000266
205 Ga0070709_10018661
206 Ga0070714_100078920
207 Ga0070714_100166249
208 Ga0070713_100000051
209 Ga0070713_100000084
210 Ga0070713_100008927
211 Ga0070713_100009137
212 Ga0070713_100022265
213 Ga0070713_100034055
214 Ga0070710_10004210
215 Ga0070711_100025786
216 Ga0070711_100080766
217 Ga0070708_100000408
218 Ga0070708_100073767
219 Ga0070708_100171919
220 Ga0070681_10047437
221 Ga0070706_100002694
222 Ga0070706_100075542
223 Ga0070706_100119893
224 Ga0070706_100161267
225 Ga0070707_100002073
226 Ga0070707_100012357
227 Ga0070699_100000383
228 Ga0070699_100015685
229 Ga0070697_100000040
230 Ga0070697_100000106
231 Ga0070697_100049839
232 Ga0068855_100220523
233 Ga0068856_100001473
234 Ga0068859_100101039
235 Ga0068858_100001985
236 Ga0068860_100008068
237 Ga0068862_100065114
238 Ga0070717_10003403
239 Ga0070717_10005354
240 Ga0070717_10057636
241 Ga0070716_100001513
242 Ga0070716_100002293
243 Ga0070712_100000011
244 Ga0070712_100000168
245 Ga0070712_100003982
246 Ga0070712_100007919
247 Ga0070712_100073098
248 Ga0068865_100004188
249 Ga0068865_100016355
250 Ga0075436_100000881
251 Ga0075436_100005117
252 Ga0097620_100101042
253 Ga0105240_10117567
254 Ga0105242_10125855
255 Ga0105237_10027592
256 Ga0105239_10021927
257 Ga0157371_10043246
258 Ga0157374_10007561
259 Ga0157372_10026003
260 Ga0157375_10008206
261 Ga0157375_10025102
262 Ga0157375_10037046
263 Ga0157375_10107555
264 Ga0163163_10087997
265 Ga0157379_10042725
266 Ga0224570_100185
267 Ga0224569_100945
268 Ga0228598_1001843
269 Ga0228598_1002315
270 Ga0207692_10001298
271 Ga0207692_10011688
272 Ga0207642_10015928
273 Ga0207647_10015540
274 Ga0207699_10000153
275 Ga0207699_10010745
276 Ga0207684_10000132
277 Ga0207684_10234737
278 Ga0207707_10105424
279 Ga0207693_10000008
280 Ga0207693_10000033
281 Ga0207693_10008525
282 Ga0207693_10013020
283 Ga0207693_10036002
284 Ga0207663_10006840
285 Ga0207663_10018300
286 Ga0207663_10022792
287 Ga0207663_10142792
288 Ga0207646_10000795
289 Ga0207646_10114367
290 Ga0207700_10000181
291 Ga0207700_10000282
292 Ga0207700_10009726
293 Ga0207700_10016907
294 Ga0207700_10025240
295 Ga0207664_10017778
296 Ga0207664_10118947
297 Ga0207686_10043607
298 Ga0207704_10004360
299 Ga0207704_10043287
300 Ga0207665_10001754
301 Ga0207665_10016115
302 Ga0207665_10069683
303 Ga0207689_10000087
304 Ga0207677_10016843
305 Ga0207703_10002474
306 Ga0207702_10000913
307 Ga0207641_10047937
308 Ga0207641_10117994
309 Ga0207676_10001165
310 Ga0207675_100005915
311 Ga0265356_1000018
312 Ga0268266_10095611
313 Ga0265323_10000251
314 Ga0265323_10010849
315 Ga0265336_10030542
316 Ga0265338_10001717
317 Ga0265338_10003060
318 Ga0265338_10007796
319 Ga0265760_10000041
320 Ga0265330_10058216
321 Ga0265332_10003660
322 Ga0265328_10005594
323 Ga0265328_10008049
324 Ga0265320_10000436
325 Ga0265340_10007614
326 Ga0265331_10007199
327 Ga0265316_10000185
328 Ga0265316_10000723
329 Ga0265316_10003118
330 Ga0265316_10010403
331 Ga0265316_10011157
332 Ga0265316_10011567
333 Ga0265316_10014721
334 Ga0265316_10037177
335 Ga0265316_10059929
336 Ga0265316_10114982
337 Ga0265314_10027062
338 Ga0265314_10027151
339 Ga0373936_0011101
340 Ga0373943_0064619
341 Ga0373935_0007611
342 Ga0373947_0035129
343 Ga0373937_0006618
344 Ga0373937_0031972
345 Ga0373925_0006920
346 Ga0395905_0188459
347 Ga0436363_0320420
348 Ga0436362_0964998
349 Ga0451577_0034941
350 Ga0453684_0036234
351 Ga0453684_0036647
352 Ga0451576_0009220
353 Ga0451576_0217180
354 Ga0495651_0096112
355 Ga0495580_0000175
356 Ga0495580_0001578
357 Ga0495582_0005080
358 Ga0495662_0032838
359 Ga0495618_0069381
360 Ga0495630_0072748
361 Ga0495586_0045964
362 Ga0495645_0014560
363 Ga0495645_0027216
364 Ga0495599_0013486
365 Ga0495658_0021829
366 Ga0495669_0030622
367 Ga0495674_0016980
368 Ga0495680_0030726
369 Ga0495602_0110496
370 Ga0496112_0004410
371 Ga0496115_0069363
372 Ga0501036_0005175
373 Ga0501038_0027108
374 Ga0501039_0060775
375 Ga0501067_0003233
376 Ga0501068_0051510
377 Ga0501070_0006179
378 Ga0501074_0023552
379 Ga0501257_007950
380 Ga0501079_0029757
381 Ga0501080_0063003
382 Ga0501044_0001663
383 Ga0501045_0201390
384 nmdc:mga08x19_29356_c1
385 nmdc:mga08x19_6640_c1
386 2522553643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

144

474

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z7s-assembly1.cif.gz_N complex i from e. coli, lmng-purified, under turnover at ph 6, closed state 0.9419 4 500
7nyh-assembly1.cif.gz_N respiratory complex i from escherichia coli - focused refinement of membrane arm 0.9418 4 496
7z7v-assembly1.cif.gz_N complex i from e. coli, lmng-purified, under turnover at ph 6, open-ready state 0.9412 4 500
6tjv-assembly1.cif.gz_B structure of the ndh-1ms complex from thermosynechococcus elongatus 0.94 11 497
7z7s-assembly1.cif.gz_N complex i from e. coli, lmng-purified, under turnover at ph 6, closed state 0.94 4 500
ID Description Score Start End Superfamily
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8771 9 132 1.10.287.3510
af_P9WIX3_4_99_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8555 119 201 1.10.287.3510
af_O05000_1_141_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8047 9 132 1.10.287.3510
af_P9WIX3_4_99_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7434 119 201 1.10.287.3510
af_O05000_1_141_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7088 9 132 1.10.287.3510
ID Description Score Start End GO Terms
AF-A0A7W1SUU8-F1-model_v4 NADH-quinone oxidoreductase subunit N 0.9725 4 260 GO:0012505
GO:0016020
AF-A0A3A4VFG0-F1-model_v4 NADH-quinone oxidoreductase subunit N (EC 7.1.1.-) (NADH dehydrogenase I subunit N) (NDH-1 subunit N) 0.9706 10 498 GO:0005886
GO:0008137
GO:0012505
GO:0042773
GO:0048038
GO:0050136
AF-A0A5N9AEP0-F1-model_v4 NADH-quinone oxidoreductase subunit N (EC 7.1.1.-) (NADH dehydrogenase I subunit N) (NDH-1 subunit N) 0.9705 10 497 GO:0005886
GO:0008137
GO:0012505
GO:0042773
GO:0048038
GO:0050136
AF-A0A2M8D446-F1-model_v4 NADH-quinone oxidoreductase subunit N 0.9705 73 497 GO:0005886
GO:0008137
GO:0012505
GO:0042773
AF-A0A2V8BJE0-F1-model_v4 NADH-quinone oxidoreductase subunit N 0.9695 5 314 GO:0012505
GO:0016020

Map