F296968

General Info

Members Datasets Scaffolds Average Seq Length
193 143 386 210

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10050129|Ga0070717_100501293
Length 244
Sequence MSRRRNAARDVEGKRIACELTERDTSAGRPSRIYVLAGTNGAGKSSIAGAMLRETGADYFDPDEAARRIRSADPRVTQADANSAAWHQGKRLLERAIAERLDFAFESTLGAATIPALLASAVALGIEVRVWYVGLSSPELHIARVRARVARGGHDIPESDIRRRWETSRLNVIRLLPKLTELRVYDNSADADPATGAAPVPVLLLHSRRGRIVAPRDLMSTPTWAKPLVAAAMRLDAETRRRRP

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
86 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
87 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
92 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
109 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
140 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 5.18
Rhizosphere 91.19
Stem 0
Stem Tuber 0
Unclassified 13.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10050129 3300006028 Bacteria 3429
2 MBSR1b_contig_9777036 2162886012 Bacteria 826
3 Ga0065715_10166148 3300005293 Bacteria 1585
4 Ga0065715_10451382 3300005293 Bacteria 825
5 Ga0070658_10154500 3300005327 Bacteria 1923
6 Ga0070683_100138662 3300005329 Bacteria 2304
7 Ga0070690_100190318 3300005330 Bacteria 1422
8 Ga0070680_100153766 3300005336 Bacteria 1932
9 Ga0070660_100194116 3300005339 Bacteria 1645
10 Ga0070668_100277482 3300005347 Bacteria 1399
11 Ga0070659_100117820 3300005366 Bacteria 2148
12 Ga0070667_100000447 3300005367 Bacteria 42767
13 Ga0070667_100633426 3300005367 Bacteria 987
14 Ga0070701_10093041 3300005438 Bacteria 1656
15 Ga0070705_100260965 3300005440 Unclassified 1222
16 Ga0070705_100602164 3300005440 Bacteria 850
17 Ga0070694_100006337 3300005444 Bacteria 7179
18 Ga0070694_100248652 3300005444 Bacteria 1344
19 Ga0070663_100467653 3300005455 Bacteria 1042
20 Ga0070678_100222628 3300005456 Bacteria 1569
21 Ga0070662_100159636 3300005457 Bacteria 1763
22 Ga0070681_10277389 3300005458 Bacteria 1587
23 Ga0070681_10400320 3300005458 Bacteria 1284
24 Ga0070685_10394202 3300005466 Bacteria 957
25 Ga0070706_100084084 3300005467 Bacteria 2949
26 Ga0070706_100295041 3300005467 Unclassified 1513
27 Ga0070707_100137620 3300005468 Bacteria 2376
28 Ga0070707_100242924 3300005468 Bacteria 1752
29 Ga0070679_100076282 3300005530 Bacteria 3342
30 Ga0070679_100197087 3300005530 Bacteria 1981
31 Ga0070679_100281026 3300005530 Bacteria 1617
32 Ga0070679_100543829 3300005530 Bacteria 1105
33 Ga0070684_100769433 3300005535 Bacteria 899
34 Ga0070697_100000045 3300005536 Bacteria 92181
35 Ga0070697_100034181 3300005536 Bacteria 4098
36 Ga0068853_100720460 3300005539 Bacteria 952
37 Ga0070686_100720660 3300005544 Bacteria 797
38 Ga0070695_100170858 3300005545 Bacteria 1533
39 Ga0070696_100149918 3300005546 Unclassified 1711
40 Ga0070665_100005250 3300005548 Bacteria 13393
41 Ga0070665_100156321 3300005548 Bacteria 2282
42 Ga0070704_100010784 3300005549 Bacteria 5572
43 Ga0070704_100028653 3300005549 Bacteria 3708
44 Ga0070704_100145000 3300005549 Bacteria 1859
45 Ga0070704_100348720 3300005549 Bacteria 1249
46 Ga0068855_100735523 3300005563 Bacteria 1053
47 Ga0068856_100292102 3300005614 Bacteria 1647
48 Ga0068859_100003471 3300005617 Bacteria 16034
49 Ga0068864_100460568 3300005618 Bacteria 1217
50 Ga0068863_100272305 3300005841 Bacteria 1639
51 Ga0068863_100694157 3300005841 Unclassified 1011
52 Ga0068860_100000016 3300005843 Bacteria 310468
53 Ga0070717_10001194 3300006028 Bacteria 17603
54 Ga0070717_10472073 3300006028 Bacteria 1132
55 Ga0070716_100140545 3300006173 Bacteria 1539
56 Ga0097621_100169313 3300006237 Unclassified 1882
57 Ga0068871_100197468 3300006358 Unclassified 1736
58 Ga0075428_100229062 3300006844 Unclassified 2005
59 Ga0075430_100157305 3300006846 Bacteria 1892
60 Ga0075431_100358348 3300006847 Bacteria 1465
61 Ga0075433_10007656 3300006852 Bacteria 8577
62 Ga0075434_100043325 3300006871 Unclassified 4463
63 Ga0075434_100115107 3300006871 Bacteria 2702
64 Ga0075429_100333443 3300006880 Unclassified 1328
65 Ga0068865_100056347 3300006881 Bacteria 2738
66 Ga0075436_100096492 3300006914 Bacteria 2057
67 Ga0097620_100000019 3300006931 Bacteria 247540
68 Ga0097620_100003471 3300006931 Bacteria 16034
69 Ga0099794_10175955 3300007265 Bacteria 1091
70 Ga0099795_10008078 3300007788 Bacteria 2979
71 Ga0105240_10025265 3300009093 Bacteria 7810
72 Ga0111539_10028887 3300009094 Bacteria 6762
73 Ga0111539_10324296 3300009094 Bacteria 1792
74 Ga0111539_10889143 3300009094 Unclassified 1036
75 Ga0114129_10114736 3300009147 Bacteria 3714
76 Ga0105248_10000025 3300009177 Bacteria 259691
77 Ga0105248_10382162 3300009177 Unclassified 1585
78 Ga0105238_10207315 3300009551 Bacteria 1936
79 Ga0105246_10321115 3300011119 Unclassified 1258
80 Ga0157369_10002541 3300013105 Bacteria 21817
81 Ga0157378_10674079 3300013297 Bacteria 1051
82 Ga0163162_10159829 3300013306 Bacteria 2374
83 Ga0157375_10023282 3300013308 Bacteria 5713
84 Ga0157375_10503117 3300013308 Bacteria 1376
85 Ga0157375_11216035 3300013308 Bacteria 884
86 Ga0157380_10006302 3300014326 Bacteria 8334
87 Ga0157380_10406099 3300014326 Bacteria 1294
88 Ga0157380_10928221 3300014326 Unclassified 899
89 Ga0207705_10006248 3300025909 Bacteria 8849
90 Ga0207705_10031719 3300025909 Bacteria 3774
91 Ga0207660_10695949 3300025917 Bacteria 829
92 Ga0207652_10450853 3300025921 Bacteria 1160
93 Ga0207646_10099784 3300025922 Bacteria 2602
94 Ga0207646_10342897 3300025922 Bacteria 1350
95 Ga0207694_10141100 3300025924 Bacteria 1937
96 Ga0207704_10373142 3300025938 Bacteria 1118
97 Ga0207665_10095994 3300025939 Unclassified 2061
98 Ga0207665_10147616 3300025939 Bacteria 1681
99 Ga0207665_10396568 3300025939 Bacteria 1050
100 Ga0207711_10000390 3300025941 Bacteria 46512
101 Ga0207658_10000299 3300025986 Bacteria 51661
102 Ga0207639_10583586 3300026041 Bacteria 1029
103 Ga0207678_10462390 3300026067 Bacteria 1104
104 Ga0207641_10250707 3300026088 Bacteria 1653
105 Ga0207641_10523235 3300026088 Unclassified 1154
106 Ga0207676_10381055 3300026095 Bacteria 1313
107 Ga0207683_10243564 3300026121 Bacteria 1640
108 Ga0268266_10004568 3300028379 Bacteria 13228
109 Ga0268266_10164010 3300028379 Bacteria 2012
110 Ga0268264_10000005 3300028381 Bacteria 934972
111 Ga0265318_10017019 3300028577 Bacteria 2992
112 Ga0307413_10460819 3300031824 Bacteria 1011
113 Ga0373933_0075493 3300035724 Bacteria 2058
114 Ga0373937_0003662 3300036401 Bacteria 12972
115 Ga0395905_0289111 3300037471 Bacteria 1526
116 Ga0395901_0039520 3300038443 Bacteria 4882
117 Ga0436360_0545421 3300039438 Bacteria 778
118 Ga0436363_0991498 3300039450 Unclassified 998
119 Ga0451847_0707987 3300041503 Bacteria 875
120 Ga0450889_012244 3300042144 Bacteria 899
121 Ga0466970_0185981 3300044765 Bacteria 1153
122 Ga0451576_0219181 3300045051 Bacteria 1987
123 Ga0495664_0074582 3300046477 Bacteria 2030
124 Ga0495665_0037997 3300046531 Bacteria 2568
125 Ga0495599_0236492 3300046678 Bacteria 1115
126 Ga0495658_0166105 3300046683 Bacteria 1364
127 Ga0495669_0396128 3300046684 Bacteria 669
128 Ga0495613_0080202 3300046689 Unclassified 2373
129 Ga0495674_0343090 3300047319 Unclassified 1214
130 Ga0495674_0412691 3300047319 Unclassified 1089
131 Ga0495675_0002403 3300047444 Bacteria 11185
132 Ga0495684_0005512 3300047471 Bacteria 9853
133 Ga0496100_0000229 3300048903 Bacteria 29723
134 Ga0496101_0000563 3300048904 Bacteria 22675
135 Ga0496102_0000449 3300048905 Bacteria 46890
136 Ga0496103_0000515 3300048906 Bacteria 31901
137 Ga0496104_0003770 3300048907 Bacteria 13105
138 Ga0496106_0006405 3300048909 Bacteria 8714
139 Ga0496106_0078123 3300048909 Unclassified 2539
140 Ga0496107_0008340 3300048910 Bacteria 7169
141 Ga0496114_0000712 3300048917 Bacteria 24721
142 Ga0496115_0003025 3300048918 Bacteria 12070
143 Ga0496117_0000417 3300048920 Bacteria 71654
144 Ga0496118_0000350 3300048921 Bacteria 78354
145 Ga0501033_0131071 3300049570 Bacteria 1816
146 Ga0501033_0141897 3300049570 Bacteria 1736
147 Ga0501036_0132532 3300049572 Archaea 2103
148 Ga0501037_0112172 3300049573 Bacteria 1964
149 Ga0501038_0114082 3300049574 Unclassified 2235
150 Ga0501038_0468689 3300049574 Bacteria 967
151 Ga0501039_0252322 3300049575 Bacteria 1387
152 Ga0501039_0785692 3300049575 Bacteria 743
153 Ga0501040_0003777 3300049576 Bacteria 9819
154 Ga0501042_0079597 3300049578 Bacteria 2348
155 Ga0501043_0313479 3300049579 Bacteria 1197
156 Ga0501043_0560862 3300049579 Bacteria 847
157 Ga0501046_0068333 3300049580 Bacteria 2766
158 Ga0501046_0094096 3300049580 Bacteria 2303
159 Ga0501047_0279755 3300049581 Bacteria 1513
160 Ga0501048_0346076 3300049582 Bacteria 1060
161 Ga0501048_0516671 3300049582 Bacteria 856
162 Ga0501071_0182614 3300049587 Unclassified 1572
163 Ga0501072_0096452 3300049588 Bacteria 2350
164 Ga0501072_0333382 3300049588 Bacteria 1205
165 Ga0501073_0626220 3300049589 Bacteria 743
166 Ga0501075_0051669 3300049591 Bacteria 3091
167 Ga0501075_0214665 3300049591 Bacteria 1467
168 Ga0501076_0141999 3300049592 Bacteria 1951
169 Ga0501076_0172875 3300049592 Bacteria 1761
170 Ga0501077_0133474 3300049593 Bacteria 1574
171 Ga0501079_0023759 3300049741 Bacteria 4703
172 Ga0501080_0204497 3300049742 Bacteria 1812
173 Ga0501080_0309699 3300049742 Bacteria 1431
174 Ga0501081_0008925 3300049743 Bacteria 6515
175 Ga0501081_0073633 3300049743 Unclassified 2382
176 nmdc:mga05p37_123469_c1 3300050507 Unclassified 3181
177 nmdc:mga05p37_52311_c1 3300050507 Bacteria 5022
178 nmdc:mga09592_764369_c1 3300050508 Bacteria 819
179 nmdc:mga0qj67_87229_c1 3300050509 Unclassified 2504
180 nmdc:mga06r32_1053341_c1 3300050510 Bacteria 764
181 nmdc:mga08y16_228384_c1 3300050511 Bacteria 1925
182 nmdc:mga0n895_245302_c1 3300050512 Bacteria 1818
183 nmdc:mga0rr50_384173_c1 3300050513 Bacteria 1184
184 nmdc:mga08x19_100659_c1 3300050514 Bacteria 1917
185 nmdc:mga08x19_70098_c1 3300050514 Bacteria 2284
186 nmdc:mga0a205_21196_c1 3300050515 Bacteria 6146
187 Ga0500583_0002813 3300053092 Bacteria 5332
188 Ga0500583_0004962 3300053092 Plasmid 4404
189 Ga0500556_0014619 3300053104 Unclassified 2402
190 Ga0501084_0008128 3300054114 Bacteria 8645
191 Ga0501082_0108689 3300060353 Bacteria 2400
192 Ga0501082_0112520 3300060353 Unclassified 2357
193 Ga0530510_0171340 3300061734 Bacteria 1608
194 Ga0070717_10050129
195 MBSR1b_contig_9777036
196 Ga0065715_10166148
197 Ga0065715_10451382
198 Ga0070658_10154500
199 Ga0070683_100138662
200 Ga0070690_100190318
201 Ga0070680_100153766
202 Ga0070660_100194116
203 Ga0070668_100277482
204 Ga0070659_100117820
205 Ga0070667_100000447
206 Ga0070667_100633426
207 Ga0070701_10093041
208 Ga0070705_100260965
209 Ga0070705_100602164
210 Ga0070694_100006337
211 Ga0070694_100248652
212 Ga0070663_100467653
213 Ga0070678_100222628
214 Ga0070662_100159636
215 Ga0070681_10277389
216 Ga0070681_10400320
217 Ga0070685_10394202
218 Ga0070706_100084084
219 Ga0070706_100295041
220 Ga0070707_100137620
221 Ga0070707_100242924
222 Ga0070679_100076282
223 Ga0070679_100197087
224 Ga0070679_100281026
225 Ga0070679_100543829
226 Ga0070684_100769433
227 Ga0070697_100000045
228 Ga0070697_100034181
229 Ga0068853_100720460
230 Ga0070686_100720660
231 Ga0070695_100170858
232 Ga0070696_100149918
233 Ga0070665_100005250
234 Ga0070665_100156321
235 Ga0070704_100010784
236 Ga0070704_100028653
237 Ga0070704_100145000
238 Ga0070704_100348720
239 Ga0068855_100735523
240 Ga0068856_100292102
241 Ga0068859_100003471
242 Ga0068864_100460568
243 Ga0068863_100272305
244 Ga0068863_100694157
245 Ga0068860_100000016
246 Ga0070717_10001194
247 Ga0070717_10472073
248 Ga0070716_100140545
249 Ga0097621_100169313
250 Ga0068871_100197468
251 Ga0075428_100229062
252 Ga0075430_100157305
253 Ga0075431_100358348
254 Ga0075433_10007656
255 Ga0075434_100043325
256 Ga0075434_100115107
257 Ga0075429_100333443
258 Ga0068865_100056347
259 Ga0075436_100096492
260 Ga0097620_100000019
261 Ga0097620_100003471
262 Ga0099794_10175955
263 Ga0099795_10008078
264 Ga0105240_10025265
265 Ga0111539_10028887
266 Ga0111539_10324296
267 Ga0111539_10889143
268 Ga0114129_10114736
269 Ga0105248_10000025
270 Ga0105248_10382162
271 Ga0105238_10207315
272 Ga0105246_10321115
273 Ga0157369_10002541
274 Ga0157378_10674079
275 Ga0163162_10159829
276 Ga0157375_10023282
277 Ga0157375_10503117
278 Ga0157375_11216035
279 Ga0157380_10006302
280 Ga0157380_10406099
281 Ga0157380_10928221
282 Ga0207705_10006248
283 Ga0207705_10031719
284 Ga0207660_10695949
285 Ga0207652_10450853
286 Ga0207646_10099784
287 Ga0207646_10342897
288 Ga0207694_10141100
289 Ga0207704_10373142
290 Ga0207665_10095994
291 Ga0207665_10147616
292 Ga0207665_10396568
293 Ga0207711_10000390
294 Ga0207658_10000299
295 Ga0207639_10583586
296 Ga0207678_10462390
297 Ga0207641_10250707
298 Ga0207641_10523235
299 Ga0207676_10381055
300 Ga0207683_10243564
301 Ga0268266_10004568
302 Ga0268266_10164010
303 Ga0268264_10000005
304 Ga0265318_10017019
305 Ga0307413_10460819
306 Ga0373933_0075493
307 Ga0373937_0003662
308 Ga0395905_0289111
309 Ga0395901_0039520
310 Ga0436360_0545421
311 Ga0436363_0991498
312 Ga0451847_0707987
313 Ga0450889_012244
314 Ga0466970_0185981
315 Ga0451576_0219181
316 Ga0495664_0074582
317 Ga0495665_0037997
318 Ga0495599_0236492
319 Ga0495658_0166105
320 Ga0495669_0396128
321 Ga0495613_0080202
322 Ga0495674_0343090
323 Ga0495674_0412691
324 Ga0495675_0002403
325 Ga0495684_0005512
326 Ga0496100_0000229
327 Ga0496101_0000563
328 Ga0496102_0000449
329 Ga0496103_0000515
330 Ga0496104_0003770
331 Ga0496106_0006405
332 Ga0496106_0078123
333 Ga0496107_0008340
334 Ga0496114_0000712
335 Ga0496115_0003025
336 Ga0496117_0000417
337 Ga0496118_0000350
338 Ga0501033_0131071
339 Ga0501033_0141897
340 Ga0501036_0132532
341 Ga0501037_0112172
342 Ga0501038_0114082
343 Ga0501038_0468689
344 Ga0501039_0252322
345 Ga0501039_0785692
346 Ga0501040_0003777
347 Ga0501042_0079597
348 Ga0501043_0313479
349 Ga0501043_0560862
350 Ga0501046_0068333
351 Ga0501046_0094096
352 Ga0501047_0279755
353 Ga0501048_0346076
354 Ga0501048_0516671
355 Ga0501071_0182614
356 Ga0501072_0096452
357 Ga0501072_0333382
358 Ga0501073_0626220
359 Ga0501075_0051669
360 Ga0501075_0214665
361 Ga0501076_0141999
362 Ga0501076_0172875
363 Ga0501077_0133474
364 Ga0501079_0023759
365 Ga0501080_0204497
366 Ga0501080_0309699
367 Ga0501081_0008925
368 Ga0501081_0073633
369 nmdc:mga05p37_123469_c1
370 nmdc:mga05p37_52311_c1
371 nmdc:mga09592_764369_c1
372 nmdc:mga0qj67_87229_c1
373 nmdc:mga06r32_1053341_c1
374 nmdc:mga08y16_228384_c1
375 nmdc:mga0n895_245302_c1
376 nmdc:mga0rr50_384173_c1
377 nmdc:mga08x19_100659_c1
378 nmdc:mga08x19_70098_c1
379 nmdc:mga0a205_21196_c1
380 Ga0500583_0002813
381 Ga0500583_0004962
382 Ga0500556_0014619
383 Ga0501084_0008128
384 Ga0501082_0108689
385 Ga0501082_0112520
386 Ga0530510_0171340

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13671

AAA_33

AAA domain

33

169

0.88

PF06414

Zeta_toxin

Zeta toxin

18

191

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mde-assembly1.cif.gz_A structure of bacterial polynucleotide kinase product complex bound to gdp and dna 0.7582 6 162
4gp6-assembly1.cif.gz_B-2 polynucleotide kinase 0.746 5 162
2rhm-assembly1.cif.gz_A crystal structure of a putative kinase (caur_3907) from chloroflexus aurantiacus j-10-fl at 1.70 a resolution 0.7296 6 138
4jt2-assembly1.cif.gz_A structure of clostridium thermocellum polynucleotide kinase bound to ctp 0.6902 5 165
4gp7-assembly1.cif.gz_B-2 polynucleotide kinase 0.6895 4 160
ID Description Score Start End Superfamily
af_O53701_2_165_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.895 8 180 3.40.50.300
af_O53701_2_165_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8798 8 180 3.40.50.300
af_I1NI49_193_440_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7706 6 169 3.40.50.300
af_A4I9X6_744_978_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7576 1 184 3.40.50.300
af_B9FCR0_254_437_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7369 6 143 3.40.50.300
ID Description Score Start End GO Terms
AF-X8A8U3-F1-model_v4 deleted 0.9898 52 213
AF-A0A1F4DIM4-F1-model_v4 ZTL protein 0.9878 3 214 GO:0005524
GO:0016301
AF-A0A7I7MLM3-F1-model_v4 Zeta toxin domain-containing protein 0.9864 28 212 GO:0005524
GO:0016301
AF-A0A7I7RGX7-F1-model_v4 Zeta toxin domain-containing protein 0.9802 28 212
AF-A0A1F4DIM4-F1-model_v4 ZTL protein 0.9787 3 214 GO:0005524
GO:0016301

Map