F296937

General Info

Members Datasets Scaffolds Average Seq Length
193 129 386 547

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100091945|Ga0068860_1000919452
Length 594
Sequence MPTRPSHLVQRLRATVRRTTGSARRLRGAFVRATPPPDATRFDRGDMLRRLESETFDVLVVGGGITGAGAALDAASRGLRTALVERDDFASGTSSKSSKLVHGGLRYLQQGEVRLVYEALRERQRLRRNAPHLVQVLPFMIPILGKAGAGETKSVVSRKIARALGSAMWMYDLTGGWRIGRIHRRLRRATAFAHLPTMDRRRLVGAYLYYDATADDARLVLTIARTAAAHGAVVANRCGVVELTHDANGIVDGAIVDTGAGRMPVRARVIVNATGVWADDVRALDEGTHPDSIRPAKGVHVTVPWSKVRNDIAVIIPVPKDKRSLFLVPWGRRTDGSFEHTYIGTTDTDYRGPLDAPQCTKDDLDYVLRAVNASVTTGITADDVTATWAGLRPLVKRADAERTADLSRRHSVAVSDHGVVTVTGGKLTTYREMAQDAIDAACARLGVDAVCRTRRLRLLGAGGAAAGIDAHLGGRFGSVASAVQGLAEGDPTLASPLVPGLPYRRAEAVHAVRHEMARTIDDVLARRTRARLLDRGACVAAAGEVAALMARELGWDDAEIDRQVATFTEACAAEAAATTVPEAELLASIARGAA

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
63 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
68 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
71 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
72 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
107 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
112 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
113 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
117 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
118 2643221549 Agromyces sp. Root1464 Isolate Unclassified
119 2643221619 Agromyces sp. Root81 Isolate Unclassified
120 2643221649 Leifsonia sp. Root4 Isolate Unclassified
121 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
122 2808606372 Agromyces sp. 23-23 Isolate Unclassified
123 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
124 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
125 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
126 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
127 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
128 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
129 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.75
Metatranscriptomes 0.52
Isolates 6.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.81
Nodule 0
Rhizoplane 5.7
Rhizosphere 80.83
Stem 0
Stem Tuber 0
Unclassified 1.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100091945 3300005843 Bacteria 2891
2 Ga0070658_10000239 3300005327 Bacteria 48737
3 Ga0070690_100073321 3300005330 Bacteria 2227
4 Ga0070680_100001033 3300005336 Bacteria 19935
5 Ga0070671_100000614 3300005355 Bacteria 25456
6 Ga0070709_10003655 3300005434 Bacteria 8255
7 Ga0070713_100000083 3300005436 Bacteria 59579
8 Ga0070705_100006195 3300005440 Bacteria 5858
9 Ga0070681_10001524 3300005458 Bacteria 20537
10 Ga0070679_100041548 3300005530 Bacteria 4576
11 Ga0070672_100058717 3300005543 Bacteria 3025
12 Ga0068862_100036267 3300005844 Bacteria 4180
13 Ga0081455_10002113 3300005937 Bacteria 23655
14 Ga0081455_10127129 3300005937 Bacteria 1998
15 Ga0075365_10009888 3300006038 Bacteria 5521
16 Ga0075365_10015945 3300006038 Bacteria 4556
17 Ga0075365_10028356 3300006038 Bacteria 3571
18 Ga0075363_100032949 3300006048 Bacteria 2695
19 Ga0075364_10011366 3300006051 Bacteria 5408
20 Ga0075364_10016174 3300006051 Bacteria 4639
21 Ga0075367_10063633 3300006178 Bacteria 2206
22 Ga0075428_100025723 3300006844 Bacteria 6517
23 Ga0075428_100046736 3300006844 Bacteria 4754
24 Ga0075428_100070763 3300006844 Bacteria 3813
25 Ga0075430_100006204 3300006846 Bacteria 10078
26 Ga0075431_100018493 3300006847 Bacteria 7097
27 Ga0075431_100064952 3300006847 Bacteria 3768
28 Ga0075434_100094352 3300006871 Bacteria 2997
29 Ga0075429_100020089 3300006880 Bacteria 5792
30 Ga0111539_10010725 3300009094 Bacteria 11533
31 Ga0105245_10037466 3300009098 Bacteria 4311
32 Ga0114129_10051562 3300009147 Bacteria 5776
33 Ga0114129_10097562 3300009147 Bacteria 4068
34 Ga0105243_10045608 3300009148 Bacteria 3445
35 Ga0157378_10005360 3300013297 Bacteria 11250
36 Ga0157379_10005025 3300014968 Bacteria 11343
37 Ga0206353_10290048 3300020082 Bacteria 10292
38 Ga0207705_10003288 3300025909 Bacteria 12308
39 Ga0207684_10056498 3300025910 Bacteria 3329
40 Ga0207707_10017994 3300025912 Bacteria 6159
41 Ga0207660_10000193 3300025917 Bacteria 38875
42 Ga0207652_10003079 3300025921 Bacteria 13906
43 Ga0207644_10018647 3300025931 Bacteria 4697
44 Ga0207709_10112205 3300025935 Bacteria 1825
45 Ga0207691_10051719 3300025940 Bacteria 3754
46 Ga0207691_10074388 3300025940 Bacteria 3064
47 Ga0207648_10009484 3300026089 Bacteria 9319
48 Ga0207675_100019346 3300026118 Bacteria 6353
49 Ga0207428_10004559 3300027907 Bacteria 13126
50 Ga0268264_10114051 3300028381 Bacteria 2372
51 Ga0268264_10206837 3300028381 Bacteria 1799
52 Ga0265338_10000149 3300028800 Bacteria 127027
53 Ga0265325_10003381 3300031241 Bacteria 10449
54 Ga0265325_10036559 3300031241 Unclassified 2600
55 Ga0265339_10012815 3300031249 Bacteria 5097
56 Ga0265327_10003044 3300031251 Bacteria 16593
57 Ga0265313_10001213 3300031595 Bacteria 24627
58 Ga0316576_10006665 3300031727 Bacteria 7211
59 Ga0316576_10070017 3300031727 Bacteria 2587
60 Ga0316577_10017032 3300031733 Bacteria 4011
61 Ga0307407_10007102 3300031903 Bacteria 5047
62 Ga0307415_100057648 3300032126 Bacteria 2670
63 Ga0373943_0010622 3300035170 Bacteria 4131
64 Ga0373955_0025925 3300035172 Bacteria 3015
65 Ga0316574_0018452 3300035398 Bacteria 4100
66 Ga0373947_0036908 3300035725 Bacteria 2898
67 Ga0373937_0033150 3300036401 Bacteria 4689
68 Ga0373937_0151136 3300036401 Bacteria 2175
69 Ga0316584_0007831 3300036712 Bacteria 7329
70 Ga0436365_0145151 3300039437 Bacteria 6592
71 Ga0436365_0151404 3300039437 Bacteria 4101
72 Ga0451577_0000394 3300042876 Bacteria 80281
73 Ga0453684_0018128 3300044712 Bacteria 10836
74 Ga0453684_0019088 3300044712 Bacteria 10465
75 Ga0495608_0029053 3300046511 Bacteria 3754
76 Ga0495618_0025402 3300046514 Bacteria 3676
77 Ga0495630_0037627 3300046517 Bacteria 3618
78 Ga0495586_0001915 3300046535 Bacteria 11334
79 Ga0495586_0057711 3300046535 Bacteria 2107
80 Ga0495645_0075694 3300046543 Bacteria 2423
81 Ga0495667_0063872 3300046559 Bacteria 2409
82 Ga0495613_0117198 3300046689 Bacteria 1915
83 Ga0495676_0083596 3300047321 Bacteria 2412
84 Ga0496100_0022314 3300048903 Bacteria 3831
85 Ga0496104_0022637 3300048907 Bacteria 5772
86 Ga0496109_0001144 3300048912 Bacteria 22058
87 Ga0496109_0050121 3300048912 Bacteria 3803
88 Ga0496109_0105488 3300048912 Bacteria 2617
89 Ga0496110_0009213 3300048913 Bacteria 7978
90 Ga0496111_0026618 3300048914 Bacteria 4086
91 Ga0496111_0143734 3300048914 Bacteria 1768
92 Ga0496112_0015324 3300048915 Bacteria 7149
93 Ga0496113_0007793 3300048916 Bacteria 6920
94 Ga0496114_0107570 3300048917 Bacteria 2387
95 Ga0501032_0005657 3300049569 Bacteria 9262
96 Ga0501033_0003171 3300049570 Bacteria 13647
97 Ga0501033_0008974 3300049570 Bacteria 7720
98 Ga0501034_0000495 3300049571 Bacteria 63904
99 Ga0501034_0007171 3300049571 Bacteria 11895
100 Ga0501034_0023449 3300049571 Bacteria 6288
101 Ga0501034_0041656 3300049571 Bacteria 4647
102 Ga0501034_0085392 3300049571 Bacteria 3158
103 Ga0501034_0111927 3300049571 Bacteria 2720
104 Ga0501036_0040104 3300049572 Bacteria 3961
105 Ga0501036_0059117 3300049572 Bacteria 3248
106 Ga0501036_0078452 3300049572 Bacteria 2793
107 Ga0501036_0084509 3300049572 Bacteria 2683
108 Ga0501038_0210407 3300049574 Unclassified 1556
109 Ga0501039_0041895 3300049575 Bacteria 3538
110 Ga0501039_0068487 3300049575 Bacteria 2755
111 Ga0501039_0182995 3300049575 Bacteria 1648
112 Ga0501040_0067442 3300049576 Bacteria 2466
113 Ga0501041_0019247 3300049577 Bacteria 4075
114 Ga0501041_0033330 3300049577 Bacteria 3116
115 Ga0501041_0045413 3300049577 Bacteria 2671
116 Ga0501042_0021743 3300049578 Bacteria 4473
117 Ga0501043_0051749 3300049579 Bacteria 3227
118 Ga0501046_0011637 3300049580 Bacteria 7521
119 Ga0501048_0021815 3300049582 Bacteria 4687
120 Ga0501048_0042481 3300049582 Bacteria 3255
121 Ga0501069_0000094 3300049585 Bacteria 41871
122 Ga0501069_0009963 3300049585 Bacteria 5024
123 Ga0501070_0000001 3300049586 Bacteria 519187
124 Ga0501070_0006548 3300049586 Bacteria 9907
125 Ga0501071_0000746 3300049587 Bacteria 17207
126 Ga0501071_0016363 3300049587 Bacteria 5098
127 Ga0501071_0120552 3300049587 Bacteria 1944
128 Ga0501072_0007191 3300049588 Bacteria 8446
129 Ga0501072_0018538 3300049588 Bacteria 5363
130 Ga0501072_0144917 3300049588 Bacteria 1894
131 Ga0501073_0034159 3300049589 Bacteria 3620
132 Ga0501075_0002034 3300049591 Bacteria 13375
133 Ga0501075_0074952 3300049591 Bacteria 2559
134 Ga0501075_0115516 3300049591 Bacteria 2041
135 Ga0501076_0044935 3300049592 Bacteria 3486
136 Ga0501076_0088064 3300049592 Bacteria 2495
137 Ga0501077_0001189 3300049593 Bacteria 15712
138 Ga0501079_0073968 3300049741 Bacteria 2634
139 Ga0501080_0016502 3300049742 Bacteria 6822
140 Ga0501080_0060200 3300049742 Bacteria 3534
141 Ga0501081_0067317 3300049743 Bacteria 2492
142 Ga0501081_0075220 3300049743 Bacteria 2357
143 Ga0501083_0000601 3300049744 Bacteria 23167
144 Ga0501083_0106470 3300049744 Bacteria 1846
145 Ga0501044_0004595 3300049823 Bacteria 15437
146 Ga0501044_0019621 3300049823 Bacteria 7227
147 Ga0501044_0068193 3300049823 Bacteria 3624
148 Ga0501045_0003982 3300049824 Bacteria 10168
149 Ga0501045_0013529 3300049824 Bacteria 5764
150 Ga0501045_0022757 3300049824 Bacteria 4488
151 nmdc:mga03n38_12233_c1 3300050490 Bacteria 3222
152 nmdc:mga00v17_12670_c1 3300050491 Bacteria 4657
153 nmdc:mga0yw44_21011_c1 3300050492 Bacteria 3634
154 nmdc:mga0yw44_7695_c1 3300050492 Bacteria 5319
155 nmdc:mga0yw44_96752_c1 3300050492 Bacteria 1874
156 nmdc:mga05p37_27512_c1 3300050507 Bacteria 6922
157 nmdc:mga05p37_326680_c1 3300050507 Bacteria 1813
158 nmdc:mga05p37_78287_c1 3300050507 Bacteria 4070
159 nmdc:mga09592_36826_c1 3300050508 Bacteria 4100
160 nmdc:mga09592_37310_c1 3300050508 Bacteria 4077
161 nmdc:mga0qj67_35233_c1 3300050509 Bacteria 3912
162 nmdc:mga0qj67_63875_c1 3300050509 Bacteria 2927
163 nmdc:mga06r32_146835_c1 3300050510 Bacteria 2336
164 nmdc:mga06r32_921_c1 3300050510 Bacteria 26109
165 nmdc:mga08y16_14194_c1 3300050511 Bacteria 8382
166 nmdc:mga08y16_31497_c1 3300050511 Bacteria 5578
167 Ga0495619_0005854 3300053085 Bacteria 7791
168 Ga0495619_0131543 3300053085 Bacteria 1720
169 Ga0500566_0001848 3300053094 Bacteria 12457
170 Ga0500568_0000015 3300053139 Bacteria 219403
171 Ga0500568_0009815 3300053139 Bacteria 4523
172 Ga0500616_0000303 3300053153 Bacteria 71156
173 Ga0500616_0015923 3300053153 Bacteria 4290
174 Ga0501084_0000051 3300054114 Bacteria 92525
175 Ga0501084_0013481 3300054114 Bacteria 6765
176 Ga0501084_0019793 3300054114 Bacteria 5609
177 Ga0501082_0007124 3300060353 Bacteria 9643
178 Ga0501082_0088870 3300060353 Bacteria 2667
179 Ga0530510_0004735 3300061734 Bacteria 9417
180 Ga0530510_0076842 3300061734 Bacteria 2427
181 2552113464 2551306166 Bacteria 9731570
182 2643767037 2643221549 Bacteria 4042819
183 2644113045 2643221619 Bacteria 4158469
184 2644278840 2643221649 Bacteria 3867359
185 2804843219 2802429296 Bacteria 7227771
186 2808899702 2808606372 Bacteria 4649509
187 2857741909 2857740372 Bacteria 4782044
188 2899362623 2899359706 Bacteria 10940472
189 2917738262 2917736166 Bacteria 9690793
190 2919061213 2919059106 Bacteria 4991624
191 2933422098 2933418574 Bacteria 4476724
192 8025416584 8025413630 Bacteria 7014048
193 8056214330 8056207758 Bacteria 8639239
194 Ga0068860_100091945
195 Ga0070658_10000239
196 Ga0070690_100073321
197 Ga0070680_100001033
198 Ga0070671_100000614
199 Ga0070709_10003655
200 Ga0070713_100000083
201 Ga0070705_100006195
202 Ga0070681_10001524
203 Ga0070679_100041548
204 Ga0070672_100058717
205 Ga0068862_100036267
206 Ga0081455_10002113
207 Ga0081455_10127129
208 Ga0075365_10009888
209 Ga0075365_10015945
210 Ga0075365_10028356
211 Ga0075363_100032949
212 Ga0075364_10011366
213 Ga0075364_10016174
214 Ga0075367_10063633
215 Ga0075428_100025723
216 Ga0075428_100046736
217 Ga0075428_100070763
218 Ga0075430_100006204
219 Ga0075431_100018493
220 Ga0075431_100064952
221 Ga0075434_100094352
222 Ga0075429_100020089
223 Ga0111539_10010725
224 Ga0105245_10037466
225 Ga0114129_10051562
226 Ga0114129_10097562
227 Ga0105243_10045608
228 Ga0157378_10005360
229 Ga0157379_10005025
230 Ga0206353_10290048
231 Ga0207705_10003288
232 Ga0207684_10056498
233 Ga0207707_10017994
234 Ga0207660_10000193
235 Ga0207652_10003079
236 Ga0207644_10018647
237 Ga0207709_10112205
238 Ga0207691_10051719
239 Ga0207691_10074388
240 Ga0207648_10009484
241 Ga0207675_100019346
242 Ga0207428_10004559
243 Ga0268264_10114051
244 Ga0268264_10206837
245 Ga0265338_10000149
246 Ga0265325_10003381
247 Ga0265325_10036559
248 Ga0265339_10012815
249 Ga0265327_10003044
250 Ga0265313_10001213
251 Ga0316576_10006665
252 Ga0316576_10070017
253 Ga0316577_10017032
254 Ga0307407_10007102
255 Ga0307415_100057648
256 Ga0373943_0010622
257 Ga0373955_0025925
258 Ga0316574_0018452
259 Ga0373947_0036908
260 Ga0373937_0033150
261 Ga0373937_0151136
262 Ga0316584_0007831
263 Ga0436365_0145151
264 Ga0436365_0151404
265 Ga0451577_0000394
266 Ga0453684_0018128
267 Ga0453684_0019088
268 Ga0495608_0029053
269 Ga0495618_0025402
270 Ga0495630_0037627
271 Ga0495586_0001915
272 Ga0495586_0057711
273 Ga0495645_0075694
274 Ga0495667_0063872
275 Ga0495613_0117198
276 Ga0495676_0083596
277 Ga0496100_0022314
278 Ga0496104_0022637
279 Ga0496109_0001144
280 Ga0496109_0050121
281 Ga0496109_0105488
282 Ga0496110_0009213
283 Ga0496111_0026618
284 Ga0496111_0143734
285 Ga0496112_0015324
286 Ga0496113_0007793
287 Ga0496114_0107570
288 Ga0501032_0005657
289 Ga0501033_0003171
290 Ga0501033_0008974
291 Ga0501034_0000495
292 Ga0501034_0007171
293 Ga0501034_0023449
294 Ga0501034_0041656
295 Ga0501034_0085392
296 Ga0501034_0111927
297 Ga0501036_0040104
298 Ga0501036_0059117
299 Ga0501036_0078452
300 Ga0501036_0084509
301 Ga0501038_0210407
302 Ga0501039_0041895
303 Ga0501039_0068487
304 Ga0501039_0182995
305 Ga0501040_0067442
306 Ga0501041_0019247
307 Ga0501041_0033330
308 Ga0501041_0045413
309 Ga0501042_0021743
310 Ga0501043_0051749
311 Ga0501046_0011637
312 Ga0501048_0021815
313 Ga0501048_0042481
314 Ga0501069_0000094
315 Ga0501069_0009963
316 Ga0501070_0000001
317 Ga0501070_0006548
318 Ga0501071_0000746
319 Ga0501071_0016363
320 Ga0501071_0120552
321 Ga0501072_0007191
322 Ga0501072_0018538
323 Ga0501072_0144917
324 Ga0501073_0034159
325 Ga0501075_0002034
326 Ga0501075_0074952
327 Ga0501075_0115516
328 Ga0501076_0044935
329 Ga0501076_0088064
330 Ga0501077_0001189
331 Ga0501079_0073968
332 Ga0501080_0016502
333 Ga0501080_0060200
334 Ga0501081_0067317
335 Ga0501081_0075220
336 Ga0501083_0000601
337 Ga0501083_0106470
338 Ga0501044_0004595
339 Ga0501044_0019621
340 Ga0501044_0068193
341 Ga0501045_0003982
342 Ga0501045_0013529
343 Ga0501045_0022757
344 nmdc:mga03n38_12233_c1
345 nmdc:mga00v17_12670_c1
346 nmdc:mga0yw44_21011_c1
347 nmdc:mga0yw44_7695_c1
348 nmdc:mga0yw44_96752_c1
349 nmdc:mga05p37_27512_c1
350 nmdc:mga05p37_326680_c1
351 nmdc:mga05p37_78287_c1
352 nmdc:mga09592_36826_c1
353 nmdc:mga09592_37310_c1
354 nmdc:mga0qj67_35233_c1
355 nmdc:mga0qj67_63875_c1
356 nmdc:mga06r32_146835_c1
357 nmdc:mga06r32_921_c1
358 nmdc:mga08y16_14194_c1
359 nmdc:mga08y16_31497_c1
360 Ga0495619_0005854
361 Ga0495619_0131543
362 Ga0500566_0001848
363 Ga0500568_0000015
364 Ga0500568_0009815
365 Ga0500616_0000303
366 Ga0500616_0015923
367 Ga0501084_0000051
368 Ga0501084_0013481
369 Ga0501084_0019793
370 Ga0501082_0007124
371 Ga0501082_0088870
372 Ga0530510_0004735
373 Ga0530510_0076842
374 2552113464
375 2643767037
376 2644113045
377 2644278840
378 2804843219
379 2808899702
380 2857741909
381 2899362623
382 2917738262
383 2919061213
384 2933422098
385 8025416584
386 8056214330

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

445

560

0.9

PF01266

DAO

FAD dependent oxidoreductase

57

431

0.81

PF01494

FAD_binding_3

FAD binding domain

55

384

0.76

PF00890

FAD_binding_2

FAD binding domain

57

304

0.7

PF12831

FAD_oxidored

FAD dependent oxidoreductase

57

276

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9611 17 47
5a9s-assembly1.cif.gz_B nadph complex of imine reductase from amycolatopsis orientalis 0.953 18 45
7cb2-assembly1.cif.gz_A the 6-phosphogluconate dehydrogenase (nadp-bound) from staphylococcus aureus 0.9437 15 47
7og3-assembly1.cif.gz_B ired-88 0.94 17 45
3zhb-assembly2.cif.gz_C r-imine reductase from streptomyces kanamyceticus in complex with nadp. 0.9396 18 44
ID Description Score Start End Superfamily
af_Q2G1C9_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9616 18 45 3.40.50.720
4e13A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9541 18 45 3.40.50.720
af_P0A6S7_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9536 15 48 3.40.50.720
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9531 19 46 3.50.50.60
5a9sB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.953 18 45 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6I2ZJV5-F1-model_v4 FAD-dependent oxidoreductase 0.9659 2 480 GO:0004368
GO:0046168
AF-A0A7I8MTI3-F1-model_v4 Aerobic glycerol-3-phosphate dehydrogenase (EC) (EC 1.1.5.3) 0.9496 3 489 GO:0004368
GO:0046168
AF-A0A2W6CFR7-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.9468 5 208 GO:0004368
GO:0009331
GO:0046168
AF-A0A2T2ULI4-F1-model_v4 FAD-dependent oxidoreductase 0.9446 3 410 GO:0004368
GO:0046168
AF-A0A7Z9Q045-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.943 3 407 GO:0004368
GO:0009331
GO:0046168

Map