F296879

General Info

Members Datasets Scaffolds Average Seq Length
193 131 386 156

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100477466|Ga0070695_1004774661
Length 171
Sequence MAGILARGSGARIRPDMLETDLRLLRNAIRIAREAREHGNHPFGALLADGEGNTLLRAENTVVTGRDCTGHAETNLMREATKAYTPQELARCTLYTSTEPCPMCAGAIFWGHVQRVVYALSEEGLYGLTGDTPDKLLLSCREVFARGARSVDVIGPALEEEARKVHEGFWR

Samples

Sample ID Description Type Environment
1 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
55 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
69 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
71 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
79 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
80 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
99 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
119 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
120 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 0
Rhizoplane 5.7
Rhizosphere 93.26
Stem 0
Stem Tuber 0
Unclassified 11.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070695_100477466 3300005545 Bacteria 960
2 rootL2_10064315 3300003322 Bacteria 2864
3 Ga0070683_100357960 3300005329 Bacteria 1390
4 Ga0070683_101013630 3300005329 Bacteria 797
5 Ga0070670_100478057 3300005331 Bacteria 1106
6 Ga0070670_101417305 3300005331 Unclassified 637
7 Ga0070677_10416634 3300005333 Bacteria 711
8 Ga0068868_101149224 3300005338 Bacteria 716
9 Ga0070668_100008994 3300005347 Bacteria 7417
10 Ga0070669_100236009 3300005353 Bacteria 1451
11 Ga0070675_100420978 3300005354 Bacteria 1194
12 Ga0070675_101075590 3300005354 Bacteria 739
13 Ga0070674_100438642 3300005356 Bacteria 1075
14 Ga0070659_100579916 3300005366 Bacteria 962
15 Ga0070667_100230594 3300005367 Bacteria 1651
16 Ga0070700_101343254 3300005441 Bacteria 602
17 Ga0070694_100066812 3300005444 Bacteria 2467
18 Ga0070694_100197186 3300005444 Bacteria 1499
19 Ga0070663_100310378 3300005455 Unclassified 1265
20 Ga0070663_101568707 3300005455 Unclassified 586
21 Ga0070678_100626890 3300005456 Bacteria 962
22 Ga0070698_100236828 3300005471 Unclassified 1758
23 Ga0070698_100516270 3300005471 Bacteria 1133
24 Ga0070699_100240688 3300005518 Bacteria 1615
25 Ga0070684_100236596 3300005535 Bacteria 1668
26 Ga0070672_100314858 3300005543 Bacteria 1329
27 Ga0070695_100082251 3300005545 Bacteria 2132
28 Ga0070695_101643346 3300005545 Bacteria 537
29 Ga0070696_100409697 3300005546 Unclassified 1062
30 Ga0070696_100851612 3300005546 Unclassified 753
31 Ga0070704_100118405 3300005549 Unclassified 2029
32 Ga0070704_100327901 3300005549 Bacteria 1285
33 Ga0068856_100728290 3300005614 Bacteria 1012
34 Ga0075365_10256959 3300006038 Bacteria 1228
35 Ga0097621_100477022 3300006237 Bacteria 1127
36 Ga0068871_102054121 3300006358 Unclassified 544
37 Ga0075428_100043073 3300006844 Bacteria 4964
38 Ga0075430_100656538 3300006846 Unclassified 865
39 Ga0075433_10132291 3300006852 Bacteria 2216
40 Ga0075429_100193620 3300006880 Unclassified 1781
41 Ga0068865_100203772 3300006881 Bacteria 1537
42 Ga0111539_10362575 3300009094 Bacteria 1687
43 Ga0114129_10032451 3300009147 Bacteria 7380
44 Ga0114129_10184453 3300009147 Bacteria 2837
45 Ga0114129_11506653 3300009147 Bacteria 826
46 Ga0114129_11573463 3300009147 Bacteria 806
47 Ga0105243_11391281 3300009148 Bacteria 722
48 Ga0105249_11384259 3300009553 Unclassified 775
49 Ga0105249_12198892 3300009553 Bacteria 624
50 Ga0105239_10825854 3300010375 Bacteria 1062
51 Ga0163162_10119746 3300013306 Bacteria 2736
52 Ga0157375_13346300 3300013308 Bacteria 534
53 Ga0157380_10355149 3300014326 Bacteria 1373
54 Ga0163161_10368898 3300017792 Bacteria 1145
55 Ga0207646_10149172 3300025922 Bacteria 2108
56 Ga0207650_10186319 3300025925 Bacteria 1656
57 Ga0207650_11179048 3300025925 Unclassified 652
58 Ga0207659_10621261 3300025926 Bacteria 922
59 Ga0207669_10459119 3300025937 Bacteria 1011
60 Ga0207704_10544613 3300025938 Bacteria 942
61 Ga0207704_10653658 3300025938 Bacteria 866
62 Ga0207691_10069846 3300025940 Bacteria 3172
63 Ga0207661_10687154 3300025944 Bacteria 941
64 Ga0207661_11144593 3300025944 Bacteria 716
65 Ga0207668_10043543 3300025972 Bacteria 3047
66 Ga0207678_10685746 3300026067 Unclassified 901
67 Ga0207675_100141138 3300026118 Bacteria 2289
68 Ga0207683_10037966 3300026121 Bacteria 4195
69 Ga0265320_10138764 3300031240 Unclassified 1102
70 Ga0307408_100003738 3300031548 Bacteria 10363
71 Ga0316575_10025065 3300031665 Bacteria 2311
72 Ga0316579_10000801 3300031691 Bacteria 10843
73 Ga0316576_10525057 3300031727 Unclassified 869
74 Ga0316578_10071360 3300031728 Bacteria 2057
75 Ga0307405_10057587 3300031731 Bacteria 2442
76 Ga0316577_10006045 3300031733 Bacteria 6379
77 Ga0307413_10177090 3300031824 Bacteria 1516
78 Ga0307410_10517786 3300031852 Bacteria 984
79 Ga0307406_10182136 3300031901 Bacteria 1530
80 Ga0307409_100445467 3300031995 Bacteria 1248
81 Ga0307416_100058912 3300032002 Bacteria 3117
82 Ga0307416_100520244 3300032002 Bacteria 1258
83 Ga0307414_10687738 3300032004 Bacteria 925
84 Ga0307411_10162598 3300032005 Bacteria 1674
85 Ga0307415_100083645 3300032126 Bacteria 2287
86 Ga0316585_10035465 3300032137 Bacteria 1580
87 Ga0316596_1000262 3300033541 Bacteria 8159
88 Ga0373950_0089113 3300034818 Unclassified 653
89 Ga0373941_0236401 3300035115 Unclassified 708
90 Ga0316574_0002761 3300035398 Bacteria 8912
91 Ga0316574_0200993 3300035398 Bacteria 1280
92 Ga0316574_0279214 3300035398 Bacteria 1064
93 Ga0373933_0964577 3300035724 Bacteria 562
94 Ga0373937_0032821 3300036401 Bacteria 4711
95 Ga0373937_0226048 3300036401 Bacteria 1762
96 Ga0316582_0000096 3300036647 Bacteria 24071
97 Ga0316582_0027469 3300036647 Bacteria 3438
98 Ga0316582_0161662 3300036647 Bacteria 1517
99 Ga0316584_0000782 3300036712 Bacteria 17839
100 Ga0316584_0038528 3300036712 Bacteria 3556
101 Ga0316584_0123449 3300036712 Bacteria 1935
102 Ga0316584_0407331 3300036712 Bacteria 968
103 Ga0316584_0722117 3300036712 Unclassified 682
104 Ga0395905_0477282 3300037471 Bacteria 1146
105 Ga0316581_0036953 3300037588 Unclassified 1483
106 Ga0439445_0208471 3300042004 Bacteria 578
107 Ga0453683_0006332 3300044673 Bacteria 8130
108 Ga0453683_0028532 3300044673 Bacteria 3533
109 Ga0453684_0152605 3300044712 Bacteria 2743
110 Ga0453684_0169215 3300044712 Bacteria 2577
111 Ga0453684_0196115 3300044712 Unclassified 2358
112 Ga0453684_0401689 3300044712 Bacteria 1535
113 Ga0453684_0451955 3300044712 Bacteria 1430
114 Ga0453684_0971273 3300044712 Archaea 905
115 Ga0453684_1704042 3300044712 Unclassified 644
116 Ga0451576_0000285 3300045051 Bacteria 123944
117 Ga0451576_0009948 3300045051 Bacteria 10970
118 Ga0451576_1016742 3300045051 Bacteria 869
119 Ga0495651_0964613 3300046462 Bacteria 519
120 Ga0495580_0047729 3300046472 Bacteria 3035
121 Ga0495630_0050538 3300046517 Bacteria 3111
122 Ga0495586_0067219 3300046535 Bacteria 1955
123 Ga0495656_0356509 3300046615 Bacteria 759
124 Ga0495635_0189257 3300046663 Unclassified 1398
125 Ga0495589_0195838 3300046794 Bacteria 955
126 Ga0496100_0037740 3300048903 Bacteria 3057
127 Ga0496101_0066397 3300048904 Bacteria 2631
128 Ga0496103_0069908 3300048906 Bacteria 2196
129 Ga0496103_0857055 3300048906 Bacteria 571
130 Ga0496104_0085206 3300048907 Bacteria 3016
131 Ga0496107_0098421 3300048910 Bacteria 2142
132 Ga0496108_0464449 3300048911 Bacteria 1106
133 Ga0496109_0600570 3300048912 Bacteria 1037
134 Ga0496109_0668988 3300048912 Bacteria 975
135 Ga0496110_0001563 3300048913 Bacteria 16687
136 Ga0496113_0096751 3300048916 Bacteria 2283
137 Ga0501298_035893 3300049521 Bacteria 991
138 Ga0501036_0041766 3300049572 Bacteria 3880
139 Ga0501036_0098793 3300049572 Bacteria 2468
140 Ga0501037_0045112 3300049573 Bacteria 3236
141 Ga0501038_0003231 3300049574 Bacteria 15203
142 Ga0501038_0038343 3300049574 Bacteria 4197
143 Ga0501039_0019927 3300049575 Bacteria 5141
144 Ga0501039_0048212 3300049575 Bacteria 3293
145 Ga0501040_0019959 3300049576 Bacteria 4461
146 Ga0501040_0081148 3300049576 Bacteria 2247
147 Ga0501041_0002638 3300049577 Bacteria 10223
148 Ga0501041_0107141 3300049577 Bacteria 1732
149 Ga0501042_0002819 3300049578 Bacteria 10768
150 Ga0501042_0023792 3300049578 Bacteria 4290
151 Ga0501043_0463593 3300049579 Bacteria 950
152 Ga0501046_0053554 3300049580 Bacteria 3177
153 Ga0501046_0146057 3300049580 Bacteria 1786
154 Ga0501048_0001754 3300049582 Bacteria 16493
155 Ga0501048_0063919 3300049582 Bacteria 2602
156 Ga0501068_0059019 3300049584 Bacteria 2329
157 Ga0501068_0064305 3300049584 Bacteria 2233
158 Ga0501071_0006210 3300049587 Bacteria 7750
159 Ga0501071_0157421 3300049587 Bacteria 1696
160 Ga0501072_0001588 3300049588 Bacteria 16983
161 Ga0501073_0268652 3300049589 Bacteria 1177
162 Ga0501074_0047611 3300049590 Bacteria 3099
163 Ga0501074_0165969 3300049590 Bacteria 1576
164 Ga0501075_0000176 3300049591 Bacteria 33190
165 Ga0501075_0004052 3300049591 Bacteria 9887
166 Ga0501076_0001163 3300049592 Bacteria 17401
167 Ga0501076_0020011 3300049592 Bacteria 5119
168 Ga0501077_0000949 3300049593 Bacteria 17465
169 Ga0501217_064120 3300049661 Bacteria 987
170 Ga0501230_131333 3300049667 Bacteria 560
171 Ga0501253_027461 3300049683 Bacteria 1058
172 Ga0501079_0000323 3300049741 Bacteria 30084
173 Ga0501079_0002405 3300049741 Bacteria 13570
174 Ga0501080_0032744 3300049742 Bacteria 4849
175 Ga0501080_0191809 3300049742 Bacteria 1877
176 Ga0501081_0003346 3300049743 Bacteria 10198
177 Ga0501081_0007430 3300049743 Bacteria 7109
178 Ga0501083_0744704 3300049744 Archaea 637
179 Ga0501045_0000868 3300049824 Bacteria 19617
180 Ga0501045_0026170 3300049824 Bacteria 4194
181 nmdc:mga05p37_1265499_c1 3300050507 Bacteria 755
182 nmdc:mga05p37_55165_c1 3300050507 Bacteria 4889
183 nmdc:mga09592_619335_c1 3300050508 Bacteria 926
184 nmdc:mga09592_92926_c1 3300050508 Bacteria 2579
185 nmdc:mga08y16_118001_c1 3300050511 Bacteria 2761
186 Ga0501084_0006918 3300054114 Bacteria 9335
187 Ga0501084_0018192 3300054114 Bacteria 5851
188 Ga0501084_0522537 3300054114 Bacteria 1003
189 Ga0501082_0006221 3300060353 Bacteria 10366
190 Ga0501082_0034615 3300060353 Bacteria 4353
191 Ga0501082_1210045 3300060353 Bacteria 660
192 Ga0530510_0000769 3300061734 Bacteria 20843
193 Ga0530510_0004431 3300061734 Bacteria 9722
194 Ga0070695_100477466
195 rootL2_10064315
196 Ga0070683_100357960
197 Ga0070683_101013630
198 Ga0070670_100478057
199 Ga0070670_101417305
200 Ga0070677_10416634
201 Ga0068868_101149224
202 Ga0070668_100008994
203 Ga0070669_100236009
204 Ga0070675_100420978
205 Ga0070675_101075590
206 Ga0070674_100438642
207 Ga0070659_100579916
208 Ga0070667_100230594
209 Ga0070700_101343254
210 Ga0070694_100066812
211 Ga0070694_100197186
212 Ga0070663_100310378
213 Ga0070663_101568707
214 Ga0070678_100626890
215 Ga0070698_100236828
216 Ga0070698_100516270
217 Ga0070699_100240688
218 Ga0070684_100236596
219 Ga0070672_100314858
220 Ga0070695_100082251
221 Ga0070695_101643346
222 Ga0070696_100409697
223 Ga0070696_100851612
224 Ga0070704_100118405
225 Ga0070704_100327901
226 Ga0068856_100728290
227 Ga0075365_10256959
228 Ga0097621_100477022
229 Ga0068871_102054121
230 Ga0075428_100043073
231 Ga0075430_100656538
232 Ga0075433_10132291
233 Ga0075429_100193620
234 Ga0068865_100203772
235 Ga0111539_10362575
236 Ga0114129_10032451
237 Ga0114129_10184453
238 Ga0114129_11506653
239 Ga0114129_11573463
240 Ga0105243_11391281
241 Ga0105249_11384259
242 Ga0105249_12198892
243 Ga0105239_10825854
244 Ga0163162_10119746
245 Ga0157375_13346300
246 Ga0157380_10355149
247 Ga0163161_10368898
248 Ga0207646_10149172
249 Ga0207650_10186319
250 Ga0207650_11179048
251 Ga0207659_10621261
252 Ga0207669_10459119
253 Ga0207704_10544613
254 Ga0207704_10653658
255 Ga0207691_10069846
256 Ga0207661_10687154
257 Ga0207661_11144593
258 Ga0207668_10043543
259 Ga0207678_10685746
260 Ga0207675_100141138
261 Ga0207683_10037966
262 Ga0265320_10138764
263 Ga0307408_100003738
264 Ga0316575_10025065
265 Ga0316579_10000801
266 Ga0316576_10525057
267 Ga0316578_10071360
268 Ga0307405_10057587
269 Ga0316577_10006045
270 Ga0307413_10177090
271 Ga0307410_10517786
272 Ga0307406_10182136
273 Ga0307409_100445467
274 Ga0307416_100058912
275 Ga0307416_100520244
276 Ga0307414_10687738
277 Ga0307411_10162598
278 Ga0307415_100083645
279 Ga0316585_10035465
280 Ga0316596_1000262
281 Ga0373950_0089113
282 Ga0373941_0236401
283 Ga0316574_0002761
284 Ga0316574_0200993
285 Ga0316574_0279214
286 Ga0373933_0964577
287 Ga0373937_0032821
288 Ga0373937_0226048
289 Ga0316582_0000096
290 Ga0316582_0027469
291 Ga0316582_0161662
292 Ga0316584_0000782
293 Ga0316584_0038528
294 Ga0316584_0123449
295 Ga0316584_0407331
296 Ga0316584_0722117
297 Ga0395905_0477282
298 Ga0316581_0036953
299 Ga0439445_0208471
300 Ga0453683_0006332
301 Ga0453683_0028532
302 Ga0453684_0152605
303 Ga0453684_0169215
304 Ga0453684_0196115
305 Ga0453684_0401689
306 Ga0453684_0451955
307 Ga0453684_0971273
308 Ga0453684_1704042
309 Ga0451576_0000285
310 Ga0451576_0009948
311 Ga0451576_1016742
312 Ga0495651_0964613
313 Ga0495580_0047729
314 Ga0495630_0050538
315 Ga0495586_0067219
316 Ga0495656_0356509
317 Ga0495635_0189257
318 Ga0495589_0195838
319 Ga0496100_0037740
320 Ga0496101_0066397
321 Ga0496103_0069908
322 Ga0496103_0857055
323 Ga0496104_0085206
324 Ga0496107_0098421
325 Ga0496108_0464449
326 Ga0496109_0600570
327 Ga0496109_0668988
328 Ga0496110_0001563
329 Ga0496113_0096751
330 Ga0501298_035893
331 Ga0501036_0041766
332 Ga0501036_0098793
333 Ga0501037_0045112
334 Ga0501038_0003231
335 Ga0501038_0038343
336 Ga0501039_0019927
337 Ga0501039_0048212
338 Ga0501040_0019959
339 Ga0501040_0081148
340 Ga0501041_0002638
341 Ga0501041_0107141
342 Ga0501042_0002819
343 Ga0501042_0023792
344 Ga0501043_0463593
345 Ga0501046_0053554
346 Ga0501046_0146057
347 Ga0501048_0001754
348 Ga0501048_0063919
349 Ga0501068_0059019
350 Ga0501068_0064305
351 Ga0501071_0006210
352 Ga0501071_0157421
353 Ga0501072_0001588
354 Ga0501073_0268652
355 Ga0501074_0047611
356 Ga0501074_0165969
357 Ga0501075_0000176
358 Ga0501075_0004052
359 Ga0501076_0001163
360 Ga0501076_0020011
361 Ga0501077_0000949
362 Ga0501217_064120
363 Ga0501230_131333
364 Ga0501253_027461
365 Ga0501079_0000323
366 Ga0501079_0002405
367 Ga0501080_0032744
368 Ga0501080_0191809
369 Ga0501081_0003346
370 Ga0501081_0007430
371 Ga0501083_0744704
372 Ga0501045_0000868
373 Ga0501045_0026170
374 nmdc:mga05p37_1265499_c1
375 nmdc:mga05p37_55165_c1
376 nmdc:mga09592_619335_c1
377 nmdc:mga09592_92926_c1
378 nmdc:mga08y16_118001_c1
379 Ga0501084_0006918
380 Ga0501084_0018192
381 Ga0501084_0522537
382 Ga0501082_0006221
383 Ga0501082_0034615
384 Ga0501082_1210045
385 Ga0530510_0000769
386 Ga0530510_0004431

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

18

120

0.96

PF14437

MafB19-deam

MafB19-like deaminase

19

139

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xko-assembly1.cif.gz_A crystal structure of native msmeg3575 deaminase from mycobacterium smegmatis 0.8847 6 152
5xkp-assembly2.cif.gz_C crystal structure of msmeg3575 in complex with 5-azacytosine 0.8793 1 153
5xkp-assembly1.cif.gz_B crystal structure of msmeg3575 in complex with 5-azacytosine 0.8786 1 153
5xkq-assembly2.cif.gz_C crystal structure of msmeg3575 in complex with ammeline 0.8739 1 152
5xkq-assembly2.cif.gz_D crystal structure of msmeg3575 in complex with ammeline 0.8727 1 153
ID Description Score Start End Superfamily
af_Q54JT2_181_429_2.70.98.30 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Golgi alpha-mannosidase II; domain 4 0.9491 27 40 2.70.98.30
af_P23467_1086_1172_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9329 26 40 2.60.40.10
af_Q9VLT3_230_326_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.9266 26 40 2.60.40.1930
af_Q9NFV8_116_214_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.921 26 40 2.60.40.1930
af_B2RU80_107_200_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9205 26 40 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A832F635-F1-model_v4 Nucleoside deaminase 0.9808 1 156 GO:0006152
GO:0047974
AF-A0A7Y5G6Q7-F1-model_v4 Nucleoside deaminase 0.9728 4 153 GO:0008270
GO:0016787
AF-A0A832F635-F1-model_v4 Nucleoside deaminase 0.9686 1 156 GO:0006152
GO:0047974
AF-R7UEJ2-F1-model_v4 CMP/dCMP-type deaminase domain-containing protein 0.9656 1 154 GO:0003824
AF-A0A424LJ35-F1-model_v4 Nucleoside deaminase 0.9646 1 151 GO:0008270
GO:0016787

Map