F296413
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 192 | 150 | 384 | 348 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2848297114|2848297470 |
| Length | 387 |
| Sequence | AASLLRWYDGHTRALPWRIPPGSNVRPDPYRIWLSEVMLQQTTVAAVRPYFERFTTRWPDVPALAAAPVEAVMAEWAGLGYYSRARNLHACAQAVAARGSFPDTEAELRRLPGIGDYTAAAIAAIAFGRRAVVVDANVERVVARLALIDTPLPQARPQIRAATDAITPDHRAGDFAQAMMDLGATICVPRNPRCLLCPLAGGCRARAEGRQEEVPVKALKKAKPQRKGAAFWIERAGEILLVQRPGTGMLGGMRALPDDGWSAAGNGSGAKPLAGDWRVLGTVRHDFTHFGLELTVHAVTVSSTPVIAGTWVPLAQVDQAGLPTLFRKAAALGLDDAAADHQPQAGQHQHDQAEIASAGLARQGADDHADDGDRQDEPIAPAEQGNG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 3 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 27 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 28 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 29 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 30 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 31 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 32 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 33 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 35 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 68 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 69 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 70 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 71 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 72 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 73 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 74 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 75 | 3300041507 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG | Metagenome | Unclassified |
| 76 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 77 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 78 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 79 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 94 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 95 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 96 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 97 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 98 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 99 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 100 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 101 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 102 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 103 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 104 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 105 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 106 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 107 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 108 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 109 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 110 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 111 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 112 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 113 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 117 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 118 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 119 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 120 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 121 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 122 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 123 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 124 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 125 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 126 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 127 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 128 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 130 | 3300053723 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere | Metagenome | Endosphere |
| 131 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 132 | 2848297114 | Croceibacterium ferulae EGI 63111 | Isolate | Unclassified |
| 133 | 2643221588 | Altererythrobacter sp. Root672 | Isolate | Unclassified |
| 134 | 2738541275 | Novosphingobium sp. GV027 | Isolate | Unclassified |
| 135 | 2738541301 | Novosphingobium sp. GV079 | Isolate | Unclassified |
| 136 | 2738541304 | Novosphingobium sp. GV061 | Isolate | Unclassified |
| 137 | 2738543022 | Novosphingobium sp. GV055 | Isolate | Unclassified |
| 138 | 2738543033 | Novosphingobium sp. GV064 | Isolate | Unclassified |
| 139 | 2739367664 | Novosphingobium sp. GV002 | Isolate | Unclassified |
| 140 | 2739367865 | Novosphingobium sp. GV013 | Isolate | Unclassified |
| 141 | 2882806704 | Pelagerythrobacter rhizovicinus AY-3R | Isolate | Rhizosphere |
| 142 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 143 | 2896184354 | Aurantiacibacter suaedae GH3-15 | Isolate | Rhizosphere |
| 144 | 2896253425 | Aurantiacibacter rhizosphaerae GH3-10 | Isolate | Rhizosphere |
| 145 | 2928100450 | Novosphingobium sp. 1529 | Isolate | Rhizosphere |
| 146 | 2928959182 | Novosphingobium capsulatum 1057 | Isolate | Unclassified |
| 147 | 2990265787 | Sphingomonas sp. SORGH_AS802 | Isolate | Aerial Root |
| 148 | 2993693658 | Sphingomonas sp. SORGH_AS438 | Isolate | Aerial Root |
| 149 | 3000865235 | Altericroceibacterium indicum DSM 18604 | Isolate | Rhizosphere |
| 150 | 8054302542 | Novosphingobium kaempferiae Sx8-5 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.1 |
| Metatranscriptomes | 0 |
| Isolates | 9.9 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.04 |
| Bulb | 0 |
| Endosphere | 12.5 |
| Nodule | 0.52 |
| Rhizoplane | 8.33 |
| Rhizosphere | 63.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_3542872 | 2162886007 | Bacteria | 1994 |
| 2 | JGI24751J29686_10000302 | 3300002459 | Bacteria | 18677 |
| 3 | Ga0065704_10000204 | 3300005289 | Bacteria | 211587 |
| 4 | Ga0065704_10000694 | 3300005289 | Bacteria | 17008 |
| 5 | Ga0070658_10032395 | 3300005327 | Bacteria | 4201 |
| 6 | Ga0070683_100067705 | 3300005329 | Bacteria | 3326 |
| 7 | Ga0070690_100118330 | 3300005330 | Bacteria | 1776 |
| 8 | Ga0070666_10120357 | 3300005335 | Bacteria | 1820 |
| 9 | Ga0070680_100004141 | 3300005336 | Bacteria | 10865 |
| 10 | Ga0070660_100001140 | 3300005339 | Bacteria | 17931 |
| 11 | Ga0070660_100011454 | 3300005339 | Bacteria | 6302 |
| 12 | Ga0070661_100002597 | 3300005344 | Bacteria | 12386 |
| 13 | Ga0070669_100000181 | 3300005353 | Bacteria | 55105 |
| 14 | Ga0070669_100000193 | 3300005353 | Bacteria | 53850 |
| 15 | Ga0070671_100000092 | 3300005355 | Bacteria | 57744 |
| 16 | Ga0070671_100268873 | 3300005355 | Bacteria | 1449 |
| 17 | Ga0070659_100177419 | 3300005366 | Bacteria | 1747 |
| 18 | Ga0070663_100107758 | 3300005455 | Bacteria | 2089 |
| 19 | Ga0070662_100003683 | 3300005457 | Bacteria | 9580 |
| 20 | Ga0070662_100013187 | 3300005457 | Bacteria | 5494 |
| 21 | Ga0070681_10028171 | 3300005458 | Bacteria | 5648 |
| 22 | Ga0070679_100002011 | 3300005530 | Bacteria | 18247 |
| 23 | Ga0070679_100002911 | 3300005530 | Bacteria | 15561 |
| 24 | Ga0070679_100048520 | 3300005530 | Bacteria | 4230 |
| 25 | Ga0068853_100000508 | 3300005539 | Bacteria | 26343 |
| 26 | Ga0070665_100021842 | 3300005548 | Bacteria | 6436 |
| 27 | Ga0068855_100006666 | 3300005563 | Bacteria | 14028 |
| 28 | Ga0068855_100027168 | 3300005563 | Bacteria | 6848 |
| 29 | Ga0068855_100059463 | 3300005563 | Bacteria | 4471 |
| 30 | Ga0068855_100061094 | 3300005563 | Bacteria | 4404 |
| 31 | Ga0068857_100037238 | 3300005577 | Bacteria | 4309 |
| 32 | Ga0068857_100143943 | 3300005577 | Bacteria | 2156 |
| 33 | Ga0068854_100064279 | 3300005578 | Bacteria | 2666 |
| 34 | Ga0068852_100255896 | 3300005616 | Bacteria | 1679 |
| 35 | Ga0068859_100126395 | 3300005617 | Bacteria | 2626 |
| 36 | Ga0068859_100215115 | 3300005617 | Bacteria | 2009 |
| 37 | Ga0068863_100067408 | 3300005841 | Bacteria | 3385 |
| 38 | Ga0068858_100074635 | 3300005842 | Bacteria | 3149 |
| 39 | Ga0068858_100102072 | 3300005842 | Bacteria | 2675 |
| 40 | Ga0068862_100016698 | 3300005844 | Bacteria | 6112 |
| 41 | Ga0075363_100019118 | 3300006048 | Bacteria | 3422 |
| 42 | Ga0075362_10004241 | 3300006177 | Bacteria | 5121 |
| 43 | Ga0075367_10009557 | 3300006178 | Bacteria | 5073 |
| 44 | Ga0075369_10001113 | 3300006186 | Bacteria | 9034 |
| 45 | Ga0075370_10023664 | 3300006353 | Bacteria | 3385 |
| 46 | Ga0097620_100126397 | 3300006931 | Bacteria | 2626 |
| 47 | Ga0097620_100191460 | 3300006931 | Bacteria | 2130 |
| 48 | Ga0097620_100215114 | 3300006931 | Bacteria | 2009 |
| 49 | Ga0079104_1005634 | 3300006946 | Bacteria | 4951 |
| 50 | Ga0105250_10011127 | 3300009092 | Bacteria | 3736 |
| 51 | Ga0105243_10071319 | 3300009148 | Bacteria | 2808 |
| 52 | Ga0105248_10048133 | 3300009177 | Bacteria | 4782 |
| 53 | Ga0105248_10082738 | 3300009177 | Bacteria | 3611 |
| 54 | Ga0105246_10000589 | 3300011119 | Bacteria | 20145 |
| 55 | Ga0157373_10015079 | 3300013100 | Bacteria | 5653 |
| 56 | Ga0157373_10042484 | 3300013100 | Bacteria | 3249 |
| 57 | Ga0157371_10034816 | 3300013102 | Bacteria | 3611 |
| 58 | Ga0157370_10003089 | 3300013104 | Bacteria | 19709 |
| 59 | Ga0157369_10003745 | 3300013105 | Bacteria | 18064 |
| 60 | Ga0163162_10003697 | 3300013306 | Bacteria | 14665 |
| 61 | Ga0163163_10322057 | 3300014325 | Bacteria | 1600 |
| 62 | Ga0207696_1001087 | 3300025711 | Bacteria | 16011 |
| 63 | Ga0207680_10018790 | 3300025903 | Bacteria | 3683 |
| 64 | Ga0207705_10011156 | 3300025909 | Bacteria | 6514 |
| 65 | Ga0207707_10072798 | 3300025912 | Bacteria | 2996 |
| 66 | Ga0207657_10000124 | 3300025919 | Bacteria | 77147 |
| 67 | Ga0207657_10019567 | 3300025919 | Bacteria | 6424 |
| 68 | Ga0207652_10002173 | 3300025921 | Bacteria | 16764 |
| 69 | Ga0207652_10012157 | 3300025921 | Bacteria | 6955 |
| 70 | Ga0207681_10000176 | 3300025923 | Bacteria | 52358 |
| 71 | Ga0207681_10000801 | 3300025923 | Bacteria | 20710 |
| 72 | Ga0207644_10000005 | 3300025931 | Bacteria | 441948 |
| 73 | Ga0207690_10239970 | 3300025932 | Bacteria | 1395 |
| 74 | Ga0207706_10000160 | 3300025933 | Bacteria | 75222 |
| 75 | Ga0207706_10008287 | 3300025933 | Bacteria | 9585 |
| 76 | Ga0207709_10048052 | 3300025935 | Bacteria | 2598 |
| 77 | Ga0207711_10268095 | 3300025941 | Bacteria | 1570 |
| 78 | Ga0207667_10001869 | 3300025949 | Bacteria | 26473 |
| 79 | Ga0207667_10007047 | 3300025949 | Bacteria | 13582 |
| 80 | Ga0207667_10011594 | 3300025949 | Bacteria | 10235 |
| 81 | Ga0207667_10087892 | 3300025949 | Bacteria | 3215 |
| 82 | Ga0207668_10007798 | 3300025972 | Bacteria | 6368 |
| 83 | Ga0207640_10004155 | 3300025981 | Bacteria | 7827 |
| 84 | Ga0207703_10001068 | 3300026035 | Bacteria | 26153 |
| 85 | Ga0207639_10125229 | 3300026041 | Bacteria | 2118 |
| 86 | Ga0207678_10094176 | 3300026067 | Bacteria | 2559 |
| 87 | Ga0207678_10129430 | 3300026067 | Bacteria | 2153 |
| 88 | Ga0207674_10073489 | 3300026116 | Bacteria | 3433 |
| 89 | Ga0207674_10176160 | 3300026116 | Bacteria | 2091 |
| 90 | Ga0207674_10207146 | 3300026116 | Bacteria | 1910 |
| 91 | Ga0207674_10420672 | 3300026116 | Bacteria | 1291 |
| 92 | Ga0207698_10033387 | 3300026142 | Bacteria | 3739 |
| 93 | Ga0268266_10007677 | 3300028379 | Bacteria | 9685 |
| 94 | Ga0268264_10031025 | 3300028381 | Bacteria | 4382 |
| 95 | Ga0307513_10001267 | 3300031456 | Bacteria | 36550 |
| 96 | Ga0307516_10100088 | 3300031730 | Bacteria | 2715 |
| 97 | Ga0307405_10015381 | 3300031731 | Bacteria | 4144 |
| 98 | Ga0307410_10146447 | 3300031852 | Bacteria | 1753 |
| 99 | Ga0307412_10147809 | 3300031911 | Bacteria | 1730 |
| 100 | Ga0307416_100367292 | 3300032002 | Bacteria | 1464 |
| 101 | Ga0307411_10042307 | 3300032005 | Bacteria | 2906 |
| 102 | Ga0307415_100154616 | 3300032126 | Bacteria | 1770 |
| 103 | Ga0451851_1283906 | 3300041507 | Bacteria | 1110 |
| 104 | Ga0439462_0001452 | 3300042015 | Bacteria | 5278 |
| 105 | Ga0453684_0144713 | 3300044712 | Bacteria | 2833 |
| 106 | Ga0451576_0000023 | 3300045051 | Bacteria | 477965 |
| 107 | Ga0495638_0067841 | 3300046460 | Bacteria | 2189 |
| 108 | Ga0495596_0000226 | 3300046500 | Bacteria | 38225 |
| 109 | Ga0495607_0035252 | 3300046501 | Bacteria | 3028 |
| 110 | Ga0495583_0132125 | 3300046506 | Bacteria | 1044 |
| 111 | Ga0495606_0006777 | 3300046507 | Bacteria | 10474 |
| 112 | Ga0495610_0000031 | 3300046512 | Bacteria | 254606 |
| 113 | Ga0495616_0019959 | 3300046513 | Bacteria | 3652 |
| 114 | Ga0495620_0003344 | 3300046515 | Bacteria | 9196 |
| 115 | Ga0495632_0000885 | 3300046519 | Bacteria | 26294 |
| 116 | Ga0495632_0003955 | 3300046519 | Bacteria | 10287 |
| 117 | Ga0495643_0007863 | 3300046522 | Bacteria | 6815 |
| 118 | Ga0495654_0062151 | 3300046530 | Bacteria | 1791 |
| 119 | Ga0495609_0001110 | 3300046538 | Bacteria | 18689 |
| 120 | Ga0495687_026457 | 3300047443 | Bacteria | 2730 |
| 121 | Ga0495615_0000060 | 3300048090 | Bacteria | 34266 |
| 122 | Ga0496100_0027946 | 3300048903 | Bacteria | 3474 |
| 123 | Ga0496102_0000445 | 3300048905 | Bacteria | 47017 |
| 124 | Ga0496102_0065162 | 3300048905 | Bacteria | 3338 |
| 125 | Ga0496102_0082572 | 3300048905 | Bacteria | 2964 |
| 126 | Ga0496103_0000021 | 3300048906 | Bacteria | 229062 |
| 127 | Ga0496103_0117714 | 3300048906 | Bacteria | 1691 |
| 128 | Ga0496104_0000131 | 3300048907 | Bacteria | 69658 |
| 129 | Ga0496105_0000111 | 3300048908 | Bacteria | 55868 |
| 130 | Ga0496105_0050513 | 3300048908 | Bacteria | 3434 |
| 131 | Ga0496107_0038602 | 3300048910 | Bacteria | 3425 |
| 132 | Ga0496109_0196416 | 3300048912 | Bacteria | 1896 |
| 133 | Ga0496110_0063676 | 3300048913 | Bacteria | 3258 |
| 134 | Ga0496110_0148611 | 3300048913 | Bacteria | 2120 |
| 135 | Ga0496111_0072052 | 3300048914 | Bacteria | 2515 |
| 136 | Ga0496112_0076259 | 3300048915 | Bacteria | 3316 |
| 137 | Ga0496114_0069162 | 3300048917 | Bacteria | 2965 |
| 138 | Ga0496118_0023178 | 3300048921 | Bacteria | 5400 |
| 139 | Ga0496119_0000339 | 3300048922 | Bacteria | 65402 |
| 140 | Ga0496120_0040128 | 3300048923 | Bacteria | 2753 |
| 141 | Ga0496121_0113492 | 3300048924 | Bacteria | 2061 |
| 142 | Ga0496122_0004078 | 3300048925 | Bacteria | 18506 |
| 143 | Ga0496122_0005436 | 3300048925 | Bacteria | 15174 |
| 144 | Ga0496123_0000367 | 3300048926 | Bacteria | 84634 |
| 145 | Ga0496123_0001112 | 3300048926 | Bacteria | 40286 |
| 146 | Ga0496124_0006240 | 3300048927 | Bacteria | 13059 |
| 147 | Ga0496124_0059056 | 3300048927 | Bacteria | 3223 |
| 148 | Ga0496125_0002118 | 3300048928 | Bacteria | 26680 |
| 149 | Ga0496126_0000367 | 3300048929 | Bacteria | 93102 |
| 150 | Ga0496126_0010300 | 3300048929 | Bacteria | 9817 |
| 151 | Ga0501034_0329429 | 3300049571 | Bacteria | 1459 |
| 152 | Ga0501047_0189327 | 3300049581 | Bacteria | 1922 |
| 153 | Ga0501047_0378919 | 3300049581 | Bacteria | 1249 |
| 154 | Ga0501044_0001276 | 3300049823 | Bacteria | 29754 |
| 155 | nmdc:mga03683_263_c1 | 3300050489 | Bacteria | 16208 |
| 156 | nmdc:mga03n38_110741_c1 | 3300050490 | Bacteria | 1337 |
| 157 | nmdc:mga03n38_159278_c1 | 3300050490 | Bacteria | 1142 |
| 158 | nmdc:mga00v17_187121_c1 | 3300050491 | Bacteria | 1337 |
| 159 | nmdc:mga00v17_187125_c1 | 3300050491 | Bacteria | 1337 |
| 160 | nmdc:mga0yw44_372298_c1 | 3300050492 | Bacteria | 964 |
| 161 | nmdc:mga06z11_9871_c1 | 3300050494 | Bacteria | 4042 |
| 162 | nmdc:mga07m45_34_c1 | 3300050496 | Bacteria | 75514 |
| 163 | nmdc:mga0sz30_591_c1 | 3300050516 | Bacteria | 13643 |
| 164 | Ga0500643_000001 | 3300053087 | Bacteria | 1440111 |
| 165 | Ga0500647_0041007 | 3300053091 | Bacteria | 2221 |
| 166 | Ga0500607_000107 | 3300053121 | Bacteria | 64565 |
| 167 | Ga0500607_002370 | 3300053121 | Bacteria | 15349 |
| 168 | Ga0500608_000157 | 3300053122 | Bacteria | 28193 |
| 169 | Ga0500559_0001127 | 3300053136 | Bacteria | 16082 |
| 170 | Ga0500564_009154 | 3300053138 | Bacteria | 4295 |
| 171 | Ga0500637_0015759 | 3300053178 | Bacteria | 4016 |
| 172 | Ga0500567_000669 | 3300053723 | Bacteria | 12472 |
| 173 | Ga0500625_000019 | 3300053729 | Bacteria | 93445 |
| 174 | 2848297470 | 2848297114 | Bacteria | 3608511 |
| 175 | 2643948747 | 2643221588 | Bacteria | 3692460 |
| 176 | 2738711627 | 2738541275 | Bacteria | 4830863 |
| 177 | 2738850052 | 2738541301 | Bacteria | 4834102 |
| 178 | 2738865781 | 2738541304 | Bacteria | 4833665 |
| 179 | 2739298299 | 2738543022 | Bacteria | 4835059 |
| 180 | 2739359977 | 2738543033 | Bacteria | 4833336 |
| 181 | 2739649239 | 2739367664 | Bacteria | 4114334 |
| 182 | 2740027712 | 2739367865 | Bacteria | 4114482 |
| 183 | 2882807282 | 2882806704 | Bacteria | 3007728 |
| 184 | 2895885976 | 2895880812 | Bacteria | 11255272 |
| 185 | 2896185320 | 2896184354 | Bacteria | 3258548 |
| 186 | 2896255715 | 2896253425 | Bacteria | 3418029 |
| 187 | 2928103780 | 2928100450 | Bacteria | 4837635 |
| 188 | 2928961708 | 2928959182 | Bacteria | 4725774 |
| 189 | 2990268321 | 2990265787 | Bacteria | 3943888 |
| 190 | 2993696647 | 2993693658 | Bacteria | 4040749 |
| 191 | 3000865358 | 3000865235 | Bacteria | 3106258 |
| 192 | 8054305334 | 8054302542 | Bacteria | 5698134 |
| 193 | SwRhRL2b_contig_3542872 | |||
| 194 | JGI24751J29686_10000302 | |||
| 195 | Ga0065704_10000204 | |||
| 196 | Ga0065704_10000694 | |||
| 197 | Ga0070658_10032395 | |||
| 198 | Ga0070683_100067705 | |||
| 199 | Ga0070690_100118330 | |||
| 200 | Ga0070666_10120357 | |||
| 201 | Ga0070680_100004141 | |||
| 202 | Ga0070660_100001140 | |||
| 203 | Ga0070660_100011454 | |||
| 204 | Ga0070661_100002597 | |||
| 205 | Ga0070669_100000181 | |||
| 206 | Ga0070669_100000193 | |||
| 207 | Ga0070671_100000092 | |||
| 208 | Ga0070671_100268873 | |||
| 209 | Ga0070659_100177419 | |||
| 210 | Ga0070663_100107758 | |||
| 211 | Ga0070662_100003683 | |||
| 212 | Ga0070662_100013187 | |||
| 213 | Ga0070681_10028171 | |||
| 214 | Ga0070679_100002011 | |||
| 215 | Ga0070679_100002911 | |||
| 216 | Ga0070679_100048520 | |||
| 217 | Ga0068853_100000508 | |||
| 218 | Ga0070665_100021842 | |||
| 219 | Ga0068855_100006666 | |||
| 220 | Ga0068855_100027168 | |||
| 221 | Ga0068855_100059463 | |||
| 222 | Ga0068855_100061094 | |||
| 223 | Ga0068857_100037238 | |||
| 224 | Ga0068857_100143943 | |||
| 225 | Ga0068854_100064279 | |||
| 226 | Ga0068852_100255896 | |||
| 227 | Ga0068859_100126395 | |||
| 228 | Ga0068859_100215115 | |||
| 229 | Ga0068863_100067408 | |||
| 230 | Ga0068858_100074635 | |||
| 231 | Ga0068858_100102072 | |||
| 232 | Ga0068862_100016698 | |||
| 233 | Ga0075363_100019118 | |||
| 234 | Ga0075362_10004241 | |||
| 235 | Ga0075367_10009557 | |||
| 236 | Ga0075369_10001113 | |||
| 237 | Ga0075370_10023664 | |||
| 238 | Ga0097620_100126397 | |||
| 239 | Ga0097620_100191460 | |||
| 240 | Ga0097620_100215114 | |||
| 241 | Ga0079104_1005634 | |||
| 242 | Ga0105250_10011127 | |||
| 243 | Ga0105243_10071319 | |||
| 244 | Ga0105248_10048133 | |||
| 245 | Ga0105248_10082738 | |||
| 246 | Ga0105246_10000589 | |||
| 247 | Ga0157373_10015079 | |||
| 248 | Ga0157373_10042484 | |||
| 249 | Ga0157371_10034816 | |||
| 250 | Ga0157370_10003089 | |||
| 251 | Ga0157369_10003745 | |||
| 252 | Ga0163162_10003697 | |||
| 253 | Ga0163163_10322057 | |||
| 254 | Ga0207696_1001087 | |||
| 255 | Ga0207680_10018790 | |||
| 256 | Ga0207705_10011156 | |||
| 257 | Ga0207707_10072798 | |||
| 258 | Ga0207657_10000124 | |||
| 259 | Ga0207657_10019567 | |||
| 260 | Ga0207652_10002173 | |||
| 261 | Ga0207652_10012157 | |||
| 262 | Ga0207681_10000176 | |||
| 263 | Ga0207681_10000801 | |||
| 264 | Ga0207644_10000005 | |||
| 265 | Ga0207690_10239970 | |||
| 266 | Ga0207706_10000160 | |||
| 267 | Ga0207706_10008287 | |||
| 268 | Ga0207709_10048052 | |||
| 269 | Ga0207711_10268095 | |||
| 270 | Ga0207667_10001869 | |||
| 271 | Ga0207667_10007047 | |||
| 272 | Ga0207667_10011594 | |||
| 273 | Ga0207667_10087892 | |||
| 274 | Ga0207668_10007798 | |||
| 275 | Ga0207640_10004155 | |||
| 276 | Ga0207703_10001068 | |||
| 277 | Ga0207639_10125229 | |||
| 278 | Ga0207678_10094176 | |||
| 279 | Ga0207678_10129430 | |||
| 280 | Ga0207674_10073489 | |||
| 281 | Ga0207674_10176160 | |||
| 282 | Ga0207674_10207146 | |||
| 283 | Ga0207674_10420672 | |||
| 284 | Ga0207698_10033387 | |||
| 285 | Ga0268266_10007677 | |||
| 286 | Ga0268264_10031025 | |||
| 287 | Ga0307513_10001267 | |||
| 288 | Ga0307516_10100088 | |||
| 289 | Ga0307405_10015381 | |||
| 290 | Ga0307410_10146447 | |||
| 291 | Ga0307412_10147809 | |||
| 292 | Ga0307416_100367292 | |||
| 293 | Ga0307411_10042307 | |||
| 294 | Ga0307415_100154616 | |||
| 295 | Ga0451851_1283906 | |||
| 296 | Ga0439462_0001452 | |||
| 297 | Ga0453684_0144713 | |||
| 298 | Ga0451576_0000023 | |||
| 299 | Ga0495638_0067841 | |||
| 300 | Ga0495596_0000226 | |||
| 301 | Ga0495607_0035252 | |||
| 302 | Ga0495583_0132125 | |||
| 303 | Ga0495606_0006777 | |||
| 304 | Ga0495610_0000031 | |||
| 305 | Ga0495616_0019959 | |||
| 306 | Ga0495620_0003344 | |||
| 307 | Ga0495632_0000885 | |||
| 308 | Ga0495632_0003955 | |||
| 309 | Ga0495643_0007863 | |||
| 310 | Ga0495654_0062151 | |||
| 311 | Ga0495609_0001110 | |||
| 312 | Ga0495687_026457 | |||
| 313 | Ga0495615_0000060 | |||
| 314 | Ga0496100_0027946 | |||
| 315 | Ga0496102_0000445 | |||
| 316 | Ga0496102_0065162 | |||
| 317 | Ga0496102_0082572 | |||
| 318 | Ga0496103_0000021 | |||
| 319 | Ga0496103_0117714 | |||
| 320 | Ga0496104_0000131 | |||
| 321 | Ga0496105_0000111 | |||
| 322 | Ga0496105_0050513 | |||
| 323 | Ga0496107_0038602 | |||
| 324 | Ga0496109_0196416 | |||
| 325 | Ga0496110_0063676 | |||
| 326 | Ga0496110_0148611 | |||
| 327 | Ga0496111_0072052 | |||
| 328 | Ga0496112_0076259 | |||
| 329 | Ga0496114_0069162 | |||
| 330 | Ga0496118_0023178 | |||
| 331 | Ga0496119_0000339 | |||
| 332 | Ga0496120_0040128 | |||
| 333 | Ga0496121_0113492 | |||
| 334 | Ga0496122_0004078 | |||
| 335 | Ga0496122_0005436 | |||
| 336 | Ga0496123_0000367 | |||
| 337 | Ga0496123_0001112 | |||
| 338 | Ga0496124_0006240 | |||
| 339 | Ga0496124_0059056 | |||
| 340 | Ga0496125_0002118 | |||
| 341 | Ga0496126_0000367 | |||
| 342 | Ga0496126_0010300 | |||
| 343 | Ga0501034_0329429 | |||
| 344 | Ga0501047_0189327 | |||
| 345 | Ga0501047_0378919 | |||
| 346 | Ga0501044_0001276 | |||
| 347 | nmdc:mga03683_263_c1 | |||
| 348 | nmdc:mga03n38_110741_c1 | |||
| 349 | nmdc:mga03n38_159278_c1 | |||
| 350 | nmdc:mga00v17_187121_c1 | |||
| 351 | nmdc:mga00v17_187125_c1 | |||
| 352 | nmdc:mga0yw44_372298_c1 | |||
| 353 | nmdc:mga06z11_9871_c1 | |||
| 354 | nmdc:mga07m45_34_c1 | |||
| 355 | nmdc:mga0sz30_591_c1 | |||
| 356 | Ga0500643_000001 | |||
| 357 | Ga0500647_0041007 | |||
| 358 | Ga0500607_000107 | |||
| 359 | Ga0500607_002370 | |||
| 360 | Ga0500608_000157 | |||
| 361 | Ga0500559_0001127 | |||
| 362 | Ga0500564_009154 | |||
| 363 | Ga0500637_0015759 | |||
| 364 | Ga0500567_000669 | |||
| 365 | Ga0500625_000019 | |||
| 366 | 2848297470 | |||
| 367 | 2643948747 | |||
| 368 | 2738711627 | |||
| 369 | 2738850052 | |||
| 370 | 2738865781 | |||
| 371 | 2739298299 | |||
| 372 | 2739359977 | |||
| 373 | 2739649239 | |||
| 374 | 2740027712 | |||
| 375 | 2882807282 | |||
| 376 | 2895885976 | |||
| 377 | 2896185320 | |||
| 378 | 2896255715 | |||
| 379 | 2928103780 | |||
| 380 | 2928961708 | |||
| 381 | 2990268321 | |||
| 382 | 2993696647 | |||
| 383 | 3000865358 | |||
| 384 | 8054305334 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1wei-assembly1.cif.gz_A | catalytic domain of muty from escherichia coli k20a mutant complexed to adenine | 0.9383 | 18 | 239 |
| 1kg3-assembly1.cif.gz_A | crystal structure of the core fragment of muty from e.coli at 1.55a resolution | 0.938 | 18 | 239 |
| 1wef-assembly1.cif.gz_A | catalytic domain of muty from escherichia coli k20a mutant | 0.9378 | 18 | 240 |
| 1kg5-assembly1.cif.gz_A | crystal structure of the k142q mutant of e.coli muty (core fragment) | 0.9318 | 18 | 240 |
| 5kn9-assembly1.cif.gz_A | muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair | 0.9308 | 10 | 238 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6IX31_1_95_1.10.1670.10 | Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.9736 | 59 | 149 | 1.10.1670.10 |
| 1rrqA02 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 0.9716 | 48 | 148 | 1.10.340.30 |
| 3n5nY02 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 0.9689 | 49 | 149 | 1.10.340.30 |
| 3fspA01 | Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.9495 | 154 | 242 | 1.10.1670.10 |
| 1kg2A02 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 0.9425 | 35 | 149 | 1.10.340.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A259JVE9-F1-model_v4 | A/G-specific adenine glycosylase | 0.9864 | 21 | 232 |
GO:0000701
GO:0006284 GO:0006298 GO:0032357 GO:0034039 GO:0035485 GO:0046872 GO:0051539 |
| AF-A0A5R2N8M4-F1-model_v4 | A/G-specific adenine glycosylase | 0.9819 | 110 | 246 |
GO:0000701
GO:0006284 GO:0006298 GO:0032357 GO:0034039 GO:0035485 GO:0046872 GO:0051539 |
| AF-A0A525K5E3-F1-model_v4 | A/G-specific adenine glycosylase | 0.9672 | 18 | 212 |
GO:0000701
GO:0006284 GO:0006298 GO:0032357 GO:0034039 GO:0035485 GO:0046872 GO:0051536 |
| AF-A0A7V5Q976-F1-model_v4 | A/G-specific adenine glycosylase | 0.955 | 21 | 132 |
GO:0000701
GO:0006284 GO:0006298 GO:0032357 GO:0034039 GO:0035485 GO:0046872 GO:0051536 |
| AF-A0A382ZY76-F1-model_v4 | HhH-GPD domain-containing protein | 0.9527 | 22 | 122 |
GO:0000701
GO:0006284 GO:0006298 GO:0032357 GO:0034039 GO:0035485 GO:0046872 GO:0051536 |