F296144

General Info

Members Datasets Scaffolds Average Seq Length
192 130 384 275

Family's Representative Sequence

Representative Sequence 3300046538|Ga0495609_0024473|Ga0495609_0024473_1524_2411
Length 295
Sequence VNPHLFDTLLSPHLAARVQEVPMTDIKQQRLASRYGEIDMQVPGNWSPVLDQLLDHRSVRSFSDAPLPEGTLEALVAAAQSAASSSNLQVWSVVAVRDEGRKARLSALAGNQAYICQAPLFLVWLADLSRISRVAEREGVELQAMPYIESLLLGTIDAALAAQNAVVALESLGLGSVYIGAIRNDIEGVAEELNLPAQVYPVFGMCVGYPDAERPAQVKPRLPQAAVLHHETYTAQDELPAIERYDERLGAFYQQAGHKPANWTEQVVSRLGSVANLHGREDLVEELRRLGFGLR

Samples

Sample ID Description Type Environment
1 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
27 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
28 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
46 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
53 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
64 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
65 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
69 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
72 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
73 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
74 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
75 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
76 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
77 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
78 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
79 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
80 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
81 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
82 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
83 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
84 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
85 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
86 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
87 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
88 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
89 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
94 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
95 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
96 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
102 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
103 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
104 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
105 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
106 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
112 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
113 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
114 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
115 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
116 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
117 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
118 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
119 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
120 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
121 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
122 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
123 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
124 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
125 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
126 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
127 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
128 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
129 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
130 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.75
Metatranscriptomes 0
Isolates 6.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.21
Nodule 0
Rhizoplane 0.52
Rhizosphere 82.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495609_0024473 3300046538 Bacteria 2770
2 JGI25151J46595_10000265 3300003187 Bacteria 59850
3 rootH2_10152859 3300003320 Bacteria 2023
4 rootH1_10230963 3300003323 Bacteria 1399
5 Ga0065714_10064589 3300005288 Bacteria 31155
6 Ga0070658_10003452 3300005327 Bacteria 12995
7 Ga0070658_10016662 3300005327 Bacteria 5882
8 Ga0070666_10187575 3300005335 Bacteria 1452
9 Ga0070661_100000024 3300005344 Bacteria 121810
10 Ga0070661_100140757 3300005344 Bacteria 1818
11 Ga0070659_100008598 3300005366 Bacteria 7465
12 Ga0070659_100239049 3300005366 Bacteria 1502
13 Ga0068853_100216203 3300005539 Bacteria 1749
14 Ga0068855_100000007 3300005563 Bacteria 273676
15 Ga0070664_100000024 3300005564 Bacteria 94521
16 Ga0068857_100030713 3300005577 Bacteria 4746
17 Ga0068854_100000263 3300005578 Bacteria 35721
18 Ga0068852_100000183 3300005616 Bacteria 42580
19 Ga0097621_100001732 3300006237 Bacteria 14928
20 Ga0105251_10052472 3300009011 Bacteria 1941
21 Ga0105244_10000169 3300009036 Bacteria 66921
22 Ga0105244_10000736 3300009036 Bacteria 28004
23 Ga0105244_10102364 3300009036 Bacteria 1400
24 Ga0105242_10005782 3300009176 Bacteria 9526
25 Ga0105237_10000042 3300009545 Bacteria 181280
26 Ga0105239_10260581 3300010375 Bacteria 1948
27 Ga0157373_10004512 3300013100 Bacteria 10465
28 Ga0157373_10014372 3300013100 Bacteria 5803
29 Ga0157370_10184140 3300013104 Bacteria 1940
30 Ga0157369_10009334 3300013105 Bacteria 11219
31 Ga0157375_10004681 3300013308 Bacteria 11902
32 Ga0213872_10001701 3300021361 Bacteria 13848
33 Ga0213872_10028402 3300021361 Bacteria 2565
34 Ga0209025_1000026 3300025294 Bacteria 519850
35 Ga0209050_1002667 3300025298 Bacteria 14580
36 Ga0207655_1000070 3300025728 Bacteria 239196
37 Ga0207655_1000077 3300025728 Bacteria 219418
38 Ga0207713_1001624 3300025735 Bacteria 17526
39 Ga0207705_10000055 3300025909 Bacteria 160436
40 Ga0207705_10032506 3300025909 Bacteria 3729
41 Ga0207671_10000474 3300025914 Bacteria 54456
42 Ga0207649_10000010 3300025920 Bacteria 284354
43 Ga0207649_10168894 3300025920 Bacteria 1522
44 Ga0207690_10039877 3300025932 Bacteria 3066
45 Ga0207690_10204501 3300025932 Bacteria 1502
46 Ga0207706_10076145 3300025933 Bacteria 2951
47 Ga0207686_10011037 3300025934 Bacteria 4933
48 Ga0207679_10000022 3300025945 Bacteria 219036
49 Ga0207667_10000038 3300025949 Bacteria 280720
50 Ga0207640_10000841 3300025981 Bacteria 17448
51 Ga0207702_10012369 3300026078 Bacteria 7106
52 Ga0207674_10028721 3300026116 Bacteria 5867
53 Ga0207698_10000120 3300026142 Bacteria 49131
54 Ga0265334_10025269 3300028573 Bacteria 2405
55 Ga0265338_10119796 3300028800 Bacteria 2100
56 Ga0265328_10000024 3300031239 Bacteria 123047
57 Ga0265328_10000061 3300031239 Bacteria 63197
58 Ga0265328_10000229 3300031239 Bacteria 25756
59 Ga0265328_10001877 3300031239 Bacteria 9553
60 Ga0265328_10009490 3300031239 Bacteria 3959
61 Ga0265328_10020222 3300031239 Bacteria 2550
62 Ga0265340_10163826 3300031247 Bacteria 1009
63 Ga0265331_10000057 3300031250 Bacteria 175827
64 Ga0265331_10000620 3300031250 Bacteria 30916
65 Ga0265331_10000813 3300031250 Bacteria 25809
66 Ga0265327_10010472 3300031251 Bacteria 6514
67 Ga0265327_10078723 3300031251 Bacteria 1632
68 Ga0265316_10000169 3300031344 Bacteria 73902
69 Ga0265316_10017547 3300031344 Bacteria 6180
70 Ga0265314_10027430 3300031711 Bacteria 4264
71 Ga0395905_0022126 3300037471 Bacteria 6015
72 Ga0436361_0104390 3300039447 Bacteria 77891
73 Ga0436361_0978678 3300039447 Bacteria 17924
74 Ga0451577_0002689 3300042876 Bacteria 20732
75 Ga0466972_0005041 3300044658 Bacteria 6620
76 Ga0466966_0102092 3300044684 Bacteria 1773
77 Ga0466963_0010542 3300044694 Bacteria 5599
78 Ga0466964_0030655 3300044706 Bacteria 2129
79 Ga0466971_0013575 3300044719 Bacteria 3579
80 Ga0466957_0030455 3300044842 Bacteria 3222
81 Ga0466960_0013358 3300044901 Bacteria 3487
82 Ga0466959_0011238 3300045049 Bacteria 6424
83 Ga0466967_0029296 3300045976 Bacteria 4606
84 Ga0495627_005664 3300046453 Bacteria 4991
85 Ga0495591_000163 3300046458 Bacteria 71039
86 Ga0495591_002803 3300046458 Bacteria 9390
87 Ga0495638_0000214 3300046460 Bacteria 81426
88 Ga0495638_0108180 3300046460 Bacteria 1654
89 Ga0495650_0002887 3300046471 Bacteria 13079
90 Ga0495650_0004818 3300046471 Bacteria 9041
91 Ga0495580_0050663 3300046472 Bacteria 2936
92 Ga0495605_0000001 3300046474 Bacteria 614538
93 Ga0495605_0000025 3300046474 Bacteria 223594
94 Ga0495605_0000158 3300046474 Bacteria 86829
95 Ga0495605_0000229 3300046474 Bacteria 68954
96 Ga0495605_0058477 3300046474 Bacteria 1853
97 Ga0495605_0101086 3300046474 Bacteria 1325
98 Ga0495585_0133285 3300046492 Bacteria 1306
99 Ga0495594_0002779 3300046499 Bacteria 9078
100 Ga0495607_0000094 3300046501 Bacteria 92515
101 Ga0495607_0000391 3300046501 Bacteria 44683
102 Ga0495607_0009733 3300046501 Bacteria 6489
103 Ga0495607_0061428 3300046501 Bacteria 2135
104 Ga0495583_0000070 3300046506 Bacteria 185226
105 Ga0495583_0002428 3300046506 Bacteria 15952
106 Ga0495610_0000163 3300046512 Bacteria 74156
107 Ga0495610_0000226 3300046512 Bacteria 60137
108 Ga0495610_0030042 3300046512 Bacteria 2852
109 Ga0495620_0000009 3300046515 Bacteria 174473
110 Ga0495620_0001640 3300046515 Bacteria 13244
111 Ga0495620_0017565 3300046515 Bacteria 3562
112 Ga0495631_0002705 3300046518 Bacteria 9846
113 Ga0495632_0000022 3300046519 Bacteria 187045
114 Ga0495632_0001627 3300046519 Bacteria 18414
115 Ga0495632_0017025 3300046519 Bacteria 4025
116 Ga0495637_0006152 3300046520 Bacteria 6038
117 Ga0495637_0006476 3300046520 Bacteria 5874
118 Ga0495637_0024297 3300046520 Bacteria 2742
119 Ga0495637_0026444 3300046520 Bacteria 2605
120 Ga0495643_0000029 3300046522 Bacteria 261028
121 Ga0495644_0011428 3300046523 Bacteria 3418
122 Ga0495648_0000938 3300046524 Bacteria 30279
123 Ga0495663_0040251 3300046525 Bacteria 1418
124 Ga0495666_0103678 3300046526 Bacteria 1339
125 Ga0495654_0001765 3300046530 Bacteria 14483
126 Ga0495654_0002794 3300046530 Bacteria 11002
127 Ga0495598_0048308 3300046537 Bacteria 1272
128 Ga0495609_0000014 3300046538 Bacteria 326023
129 Ga0495609_0000074 3300046538 Bacteria 123121
130 Ga0495597_0000008 3300046542 Bacteria 232976
131 Ga0495597_0003917 3300046542 Bacteria 8405
132 Ga0495633_0000010 3300046558 Bacteria 280844
133 Ga0495633_0020762 3300046558 Bacteria 3298
134 Ga0495611_0000304 3300046648 Bacteria 33362
135 Ga0495661_0000008 3300046665 Bacteria 317971
136 Ga0495661_0001371 3300046665 Bacteria 20564
137 Ga0495647_0027678 3300046681 Bacteria 2084
138 Ga0495670_0000005 3300046691 Bacteria 289725
139 Ga0495670_0003886 3300046691 Bacteria 7337
140 Ga0495671_0023930 3300046692 Bacteria 3187
141 Ga0495671_0097380 3300046692 Bacteria 1439
142 Ga0495589_0002407 3300046794 Bacteria 10508
143 Ga0495660_0001037 3300046810 Bacteria 20156
144 Ga0495660_0007195 3300046810 Bacteria 6552
145 Ga0495660_0014105 3300046810 Bacteria 4629
146 Ga0495660_0022508 3300046810 Bacteria 3598
147 Ga0495683_0000002 3300047323 Bacteria 638279
148 Ga0495683_0000073 3300047323 Bacteria 101074
149 Ga0495687_001566 3300047443 Bacteria 20764
150 Ga0495679_000133 3300047446 Bacteria 66052
151 Ga0495673_0001921 3300047469 Bacteria 15487
152 Ga0495673_0004717 3300047469 Bacteria 8453
153 Ga0495673_0022885 3300047469 Bacteria 3054
154 Ga0495681_0022429 3300047470 Bacteria 3378
155 Ga0495686_0000105 3300047472 Bacteria 176098
156 Ga0495686_0002438 3300047472 Bacteria 17562
157 Ga0496114_0001091 3300048917 Bacteria 20469
158 Ga0496117_0002110 3300048920 Bacteria 26142
159 Ga0496118_0025268 3300048921 Bacteria 5099
160 Ga0496119_0018828 3300048922 Bacteria 5116
161 Ga0496120_0000310 3300048923 Bacteria 81092
162 Ga0496121_0010264 3300048924 Bacteria 10597
163 Ga0496122_0006302 3300048925 Bacteria 13676
164 Ga0496122_0027341 3300048925 Bacteria 4881
165 Ga0496123_0001070 3300048926 Bacteria 41381
166 Ga0496123_0003844 3300048926 Bacteria 16359
167 Ga0496124_0002392 3300048927 Bacteria 24676
168 Ga0496124_0013410 3300048927 Bacteria 7999
169 Ga0496125_0001343 3300048928 Bacteria 36244
170 Ga0496125_0004042 3300048928 Bacteria 17200
171 Ga0496126_0081203 3300048929 Bacteria 2867
172 Ga0495678_000005 3300049459 Bacteria 522958
173 nmdc:mga00v17_72051_c1 3300050491 Bacteria 2143
174 Ga0500618_025220 3300053125 Bacteria 1427
175 Ga0500616_0012710 3300053153 Bacteria 4920
176 Ga0500622_0155035 3300053156 Bacteria 1079
177 Ga0500634_0046749 3300053161 Bacteria 2337
178 Ga0500636_0004466 3300053177 Bacteria 7922
179 Ga0500636_0187899 3300053177 Bacteria 1103
180 Ga0466962_0001247 3300061719 Bacteria 11734
181 2715756822 2713897149 Bacteria 6506249
182 2738669793 2738541265 Bacteria 6594665
183 2738748186 2738541282 Bacteria 6593925
184 2738857228 2738541303 Bacteria 6591772
185 2891090266 2891088606 Bacteria 4762464
186 2904482293 2904479285 Bacteria 5073931
187 2919126878 2919125081 Bacteria 5385106
188 2919156381 2919155634 Bacteria 4860545
189 2931401390 2931396565 Bacteria 7251677
190 3007422238 3007419365 Bacteria 7026924
191 8002060313 8002060224 Bacteria 4026565
192 8016733229 8016728285 Bacteria 5263933
193 Ga0495609_0024473
194 JGI25151J46595_10000265
195 rootH2_10152859
196 rootH1_10230963
197 Ga0065714_10064589
198 Ga0070658_10003452
199 Ga0070658_10016662
200 Ga0070666_10187575
201 Ga0070661_100000024
202 Ga0070661_100140757
203 Ga0070659_100008598
204 Ga0070659_100239049
205 Ga0068853_100216203
206 Ga0068855_100000007
207 Ga0070664_100000024
208 Ga0068857_100030713
209 Ga0068854_100000263
210 Ga0068852_100000183
211 Ga0097621_100001732
212 Ga0105251_10052472
213 Ga0105244_10000169
214 Ga0105244_10000736
215 Ga0105244_10102364
216 Ga0105242_10005782
217 Ga0105237_10000042
218 Ga0105239_10260581
219 Ga0157373_10004512
220 Ga0157373_10014372
221 Ga0157370_10184140
222 Ga0157369_10009334
223 Ga0157375_10004681
224 Ga0213872_10001701
225 Ga0213872_10028402
226 Ga0209025_1000026
227 Ga0209050_1002667
228 Ga0207655_1000070
229 Ga0207655_1000077
230 Ga0207713_1001624
231 Ga0207705_10000055
232 Ga0207705_10032506
233 Ga0207671_10000474
234 Ga0207649_10000010
235 Ga0207649_10168894
236 Ga0207690_10039877
237 Ga0207690_10204501
238 Ga0207706_10076145
239 Ga0207686_10011037
240 Ga0207679_10000022
241 Ga0207667_10000038
242 Ga0207640_10000841
243 Ga0207702_10012369
244 Ga0207674_10028721
245 Ga0207698_10000120
246 Ga0265334_10025269
247 Ga0265338_10119796
248 Ga0265328_10000024
249 Ga0265328_10000061
250 Ga0265328_10000229
251 Ga0265328_10001877
252 Ga0265328_10009490
253 Ga0265328_10020222
254 Ga0265340_10163826
255 Ga0265331_10000057
256 Ga0265331_10000620
257 Ga0265331_10000813
258 Ga0265327_10010472
259 Ga0265327_10078723
260 Ga0265316_10000169
261 Ga0265316_10017547
262 Ga0265314_10027430
263 Ga0395905_0022126
264 Ga0436361_0104390
265 Ga0436361_0978678
266 Ga0451577_0002689
267 Ga0466972_0005041
268 Ga0466966_0102092
269 Ga0466963_0010542
270 Ga0466964_0030655
271 Ga0466971_0013575
272 Ga0466957_0030455
273 Ga0466960_0013358
274 Ga0466959_0011238
275 Ga0466967_0029296
276 Ga0495627_005664
277 Ga0495591_000163
278 Ga0495591_002803
279 Ga0495638_0000214
280 Ga0495638_0108180
281 Ga0495650_0002887
282 Ga0495650_0004818
283 Ga0495580_0050663
284 Ga0495605_0000001
285 Ga0495605_0000025
286 Ga0495605_0000158
287 Ga0495605_0000229
288 Ga0495605_0058477
289 Ga0495605_0101086
290 Ga0495585_0133285
291 Ga0495594_0002779
292 Ga0495607_0000094
293 Ga0495607_0000391
294 Ga0495607_0009733
295 Ga0495607_0061428
296 Ga0495583_0000070
297 Ga0495583_0002428
298 Ga0495610_0000163
299 Ga0495610_0000226
300 Ga0495610_0030042
301 Ga0495620_0000009
302 Ga0495620_0001640
303 Ga0495620_0017565
304 Ga0495631_0002705
305 Ga0495632_0000022
306 Ga0495632_0001627
307 Ga0495632_0017025
308 Ga0495637_0006152
309 Ga0495637_0006476
310 Ga0495637_0024297
311 Ga0495637_0026444
312 Ga0495643_0000029
313 Ga0495644_0011428
314 Ga0495648_0000938
315 Ga0495663_0040251
316 Ga0495666_0103678
317 Ga0495654_0001765
318 Ga0495654_0002794
319 Ga0495598_0048308
320 Ga0495609_0000014
321 Ga0495609_0000074
322 Ga0495597_0000008
323 Ga0495597_0003917
324 Ga0495633_0000010
325 Ga0495633_0020762
326 Ga0495611_0000304
327 Ga0495661_0000008
328 Ga0495661_0001371
329 Ga0495647_0027678
330 Ga0495670_0000005
331 Ga0495670_0003886
332 Ga0495671_0023930
333 Ga0495671_0097380
334 Ga0495589_0002407
335 Ga0495660_0001037
336 Ga0495660_0007195
337 Ga0495660_0014105
338 Ga0495660_0022508
339 Ga0495683_0000002
340 Ga0495683_0000073
341 Ga0495687_001566
342 Ga0495679_000133
343 Ga0495673_0001921
344 Ga0495673_0004717
345 Ga0495673_0022885
346 Ga0495681_0022429
347 Ga0495686_0000105
348 Ga0495686_0002438
349 Ga0496114_0001091
350 Ga0496117_0002110
351 Ga0496118_0025268
352 Ga0496119_0018828
353 Ga0496120_0000310
354 Ga0496121_0010264
355 Ga0496122_0006302
356 Ga0496122_0027341
357 Ga0496123_0001070
358 Ga0496123_0003844
359 Ga0496124_0002392
360 Ga0496124_0013410
361 Ga0496125_0001343
362 Ga0496125_0004042
363 Ga0496126_0081203
364 Ga0495678_000005
365 nmdc:mga00v17_72051_c1
366 Ga0500618_025220
367 Ga0500616_0012710
368 Ga0500622_0155035
369 Ga0500634_0046749
370 Ga0500636_0004466
371 Ga0500636_0187899
372 Ga0466962_0001247
373 2715756822
374 2738669793
375 2738748186
376 2738857228
377 2891090266
378 2904482293
379 2919126878
380 2919156381
381 2931401390
382 3007422238
383 8002060313
384 8016733229

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00881

Nitroreductase

Nitroreductase family

53

209

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zch-assembly1.cif.gz_A-2 structure of the hypothetical oxidoreductase ycnd from bacillus subtilis 0.8964 34 264
3n2s-assembly2.cif.gz_D structure of nfra1 nitroreductase from b. subtilis 0.8909 37 262
5hei-assembly3.cif.gz_E structure of b. megaterium nfra2 0.8887 34 264
5hdj-assembly1.cif.gz_A structure of b. megaterium nfra1 0.856 35 262
7z0w-assembly2.cif.gz_C e. coli nfsa bound to nadp+ 0.8533 34 264
ID Description Score Start End Superfamily
af_Q2G0Z5_3_251_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.884 35 264 3.40.109.10
5heiD00 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.8811 34 264 3.40.109.10
3n2sC00 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.863 35 261 3.40.109.10
5heiD00 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.827 34 264 3.40.109.10
af_Q2G0Z5_3_251_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.817 35 264 3.40.109.10
ID Description Score Start End GO Terms
AF-A0A235F3X8-F1-model_v4 NADPH-dependent oxidoreductase 0.9508 34 145 GO:0016491
AF-A0A1G2ZLH6-F1-model_v4 NADPH-dependent oxidoreductase 0.9452 44 182 GO:0016491
AF-A0A370G311-F1-model_v4 NADPH-dependent oxidoreductase (Nitroreductase) 0.9445 38 264 GO:0016491
AF-F3KR30-F1-model_v4 Nitroreductase 0.9437 5 264 GO:0016491
AF-A0A660VE71-F1-model_v4 NADPH-dependent oxidoreductase 0.938 34 145 GO:0016491

Map