F295891

General Info

Members Datasets Scaffolds Average Seq Length
192 135 384 226

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100576007|Ga0307409_1005760072
Length 256
Sequence VEKTDRDEQMGRIRAVGSTVVVAMDGPSGSGKSSTARGVADRLGLRYLDTGAQFRAMAVWMLRHDVDVNDAEAVATRAADPVILSGTDPLEPTITLDGEDVASEVRSAEATAAVSPVATVPAVRQRLLELQREIISAALGEGGIVVEGRDIGSVVWSQAEVKLYLTADPAARAARRAAENGSGSLEATEADLLRRDAIDSGRASAPLVVPEGALHLDTTPWELDEVIDRVVAIVEDAREQAVEQASRGSAAQRTSS

Samples

Sample ID Description Type Environment
1 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
91 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
92 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
131 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
132 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
133 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
134 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
135 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.92
Metatranscriptomes 0
Isolates 2.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.98
Nodule 0
Rhizoplane 1.04
Rhizosphere 84.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307409_100576007 3300031995 Bacteria 1109
2 LJQas_1006009 3300000549 Bacteria 1521
3 rootH1_10262794 3300003323 Bacteria 1555
4 Ga0070658_10190796 3300005327 Bacteria 1727
5 Ga0070683_100052115 3300005329 Bacteria 3790
6 Ga0070680_100545041 3300005336 Bacteria 994
7 Ga0070682_100029317 3300005337 Bacteria 3312
8 Ga0070660_100067603 3300005339 Bacteria 2784
9 Ga0070692_10008997 3300005345 Bacteria 4481
10 Ga0070692_10094758 3300005345 Bacteria 1628
11 Ga0070668_100372779 3300005347 Bacteria 1213
12 Ga0070671_100595833 3300005355 Bacteria 955
13 Ga0070674_100034885 3300005356 Bacteria 3364
14 Ga0070659_100039921 3300005366 Bacteria 3666
15 Ga0070701_10011491 3300005438 Bacteria 3960
16 Ga0070700_100000408 3300005441 Bacteria 21959
17 Ga0070663_100413286 3300005455 Bacteria 1105
18 Ga0070662_100000148 3300005457 Bacteria 40063
19 Ga0070662_100038050 3300005457 Bacteria 3415
20 Ga0070685_10022307 3300005466 Bacteria 3450
21 Ga0070685_10281276 3300005466 Bacteria 1114
22 Ga0070684_100023771 3300005535 Bacteria 5132
23 Ga0070684_100507475 3300005535 Bacteria 1117
24 Ga0068853_100060753 3300005539 Bacteria 3266
25 Ga0070686_100000226 3300005544 Bacteria 38574
26 Ga0070693_100114371 3300005547 Bacteria 1665
27 Ga0070664_100048945 3300005564 Bacteria 3574
28 Ga0070664_100133601 3300005564 Bacteria 2181
29 Ga0070664_100425312 3300005564 Bacteria 1217
30 Ga0068856_100063558 3300005614 Bacteria 3647
31 Ga0070702_100003095 3300005615 Bacteria 7362
32 Ga0068859_100686599 3300005617 Bacteria 1115
33 Ga0068861_100309483 3300005719 Bacteria 1371
34 Ga0068870_10004410 3300005840 Bacteria 6063
35 Ga0081539_10015245 3300005985 Bacteria 5600
36 Ga0075365_10013887 3300006038 Bacteria 4831
37 Ga0075365_10402273 3300006038 Bacteria 966
38 Ga0075365_10508418 3300006038 Bacteria 852
39 Ga0075368_10024072 3300006042 Bacteria 2330
40 Ga0075363_100005567 3300006048 Bacteria 5618
41 Ga0075363_100064311 3300006048 Bacteria 1981
42 Ga0075364_10023635 3300006051 Bacteria 3893
43 Ga0075364_10341368 3300006051 Bacteria 1021
44 Ga0075367_10007299 3300006178 Bacteria 5652
45 Ga0075367_10025079 3300006178 Bacteria 3368
46 Ga0075370_10064794 3300006353 Bacteria 2084
47 Ga0075428_100117157 3300006844 Bacteria 2901
48 Ga0075428_100379781 3300006844 Bacteria 1515
49 Ga0068865_100062690 3300006881 Bacteria 2610
50 Ga0097620_100686678 3300006931 Bacteria 1115
51 Ga0105245_10462437 3300009098 Bacteria 1279
52 Ga0114129_10946894 3300009147 Bacteria 1088
53 Ga0105243_10007143 3300009148 Bacteria 8586
54 Ga0105248_10018881 3300009177 Bacteria 7624
55 Ga0105248_11143509 3300009177 Bacteria 880
56 Ga0105237_10537284 3300009545 Bacteria 1176
57 Ga0105238_10000003 3300009551 Bacteria 422077
58 Ga0105239_10009441 3300010375 Bacteria 10990
59 Ga0105239_10120771 3300010375 Bacteria 2910
60 Ga0157372_10313309 3300013307 Bacteria 1826
61 Ga0157372_10377346 3300013307 Bacteria 1652
62 Ga0157372_10589041 3300013307 Bacteria 1296
63 Ga0157375_10194856 3300013308 Bacteria 2181
64 Ga0163163_10022649 3300014325 Bacteria 5953
65 Ga0163163_10030016 3300014325 Bacteria 5234
66 Ga0157380_10344780 3300014326 Bacteria 1391
67 Ga0157377_10006028 3300014745 Bacteria 5749
68 Ga0207688_10010998 3300025901 Bacteria 4923
69 Ga0207647_10005947 3300025904 Bacteria 8895
70 Ga0207643_10007337 3300025908 Bacteria 5917
71 Ga0207643_10047965 3300025908 Bacteria 2419
72 Ga0207705_10487421 3300025909 Bacteria 957
73 Ga0207671_10318770 3300025914 Bacteria 1230
74 Ga0207660_10100133 3300025917 Bacteria 2163
75 Ga0207657_10008485 3300025919 Bacteria 10424
76 Ga0207657_10114516 3300025919 Bacteria 2224
77 Ga0207652_10217350 3300025921 Bacteria 1722
78 Ga0207694_10000020 3300025924 Bacteria 310240
79 Ga0207659_10244924 3300025926 Bacteria 1452
80 Ga0207687_10280723 3300025927 Bacteria 1335
81 Ga0207706_10000235 3300025933 Bacteria 60742
82 Ga0207706_10055262 3300025933 Bacteria 3502
83 Ga0207709_10012414 3300025935 Bacteria 4694
84 Ga0207670_10057123 3300025936 Bacteria 2646
85 Ga0207669_10158271 3300025937 Bacteria 1596
86 Ga0207704_10015751 3300025938 Bacteria 3863
87 Ga0207704_10286442 3300025938 Bacteria 1255
88 Ga0207691_10002663 3300025940 Bacteria 17451
89 Ga0207691_10101103 3300025940 Bacteria 2573
90 Ga0207661_10439476 3300025944 Bacteria 1187
91 Ga0207679_10080489 3300025945 Bacteria 2487
92 Ga0207651_10150702 3300025960 Bacteria 1810
93 Ga0207712_10108535 3300025961 Bacteria 2077
94 Ga0207658_10773418 3300025986 Bacteria 871
95 Ga0207677_10340946 3300026023 Bacteria 1252
96 Ga0207639_10072229 3300026041 Bacteria 2701
97 Ga0207678_10149024 3300026067 Bacteria 1997
98 Ga0207708_10000533 3300026075 Bacteria 29368
99 Ga0207702_10044925 3300026078 Bacteria 3715
100 Ga0207648_10006544 3300026089 Bacteria 11567
101 Ga0207674_10146981 3300026116 Bacteria 2315
102 Ga0207675_100017756 3300026118 Bacteria 6637
103 Ga0207675_100154297 3300026118 Bacteria 2188
104 Ga0207683_10113134 3300026121 Bacteria 2431
105 Ga0207698_10024789 3300026142 Bacteria 4216
106 Ga0209813_10042817 3300027866 Bacteria 1385
107 Ga0209813_10155308 3300027866 Bacteria 822
108 Ga0265327_10023546 3300031251 Bacteria 3646
109 Ga0265314_10001624 3300031711 Bacteria 24610
110 Ga0307410_10199151 3300031852 Bacteria 1528
111 Ga0307410_10232483 3300031852 Bacteria 1424
112 Ga0307407_10062396 3300031903 Bacteria 2182
113 Ga0307407_10151767 3300031903 Bacteria 1506
114 Ga0307409_100009270 3300031995 Bacteria 6038
115 Ga0307409_100796832 3300031995 Bacteria 952
116 Ga0307416_100003451 3300032002 Bacteria 9283
117 Ga0307416_100585293 3300032002 Bacteria 1194
118 Ga0307416_101093871 3300032002 Bacteria 902
119 Ga0307415_100004810 3300032126 Bacteria 7077
120 Ga0307415_100303567 3300032126 Bacteria 1323
121 Ga0307415_100492603 3300032126 Bacteria 1070
122 Ga0373930_0025479 3300034816 Bacteria 1187
123 Ga0373959_0000186 3300034820 Bacteria 13827
124 Ga0373938_0107582 3300034957 Bacteria 707
125 Ga0395899_0037091 3300037312 Bacteria 3655
126 Ga0395899_0051508 3300037312 Bacteria 3055
127 Ga0395900_0142465 3300037418 Bacteria 2454
128 Ga0395898_0082030 3300037466 Bacteria 3109
129 Ga0395905_0021080 3300037471 Bacteria 6170
130 Ga0395901_0008955 3300038443 Bacteria 10136
131 Ga0466965_0009513 3300044683 Bacteria 4516
132 Ga0466965_0047815 3300044683 Bacteria 2118
133 Ga0466965_0144806 3300044683 Bacteria 1239
134 Ga0466966_0008745 3300044684 Bacteria 6702
135 Ga0466961_0064094 3300044693 Bacteria 2335
136 Ga0466961_0122323 3300044693 Bacteria 1633
137 Ga0466963_0057166 3300044694 Bacteria 2597
138 Ga0466963_0102593 3300044694 Bacteria 1959
139 Ga0466971_0160575 3300044719 Bacteria 1052
140 Ga0466970_0021026 3300044765 Bacteria 3397
141 Ga0466970_0055726 3300044765 Bacteria 2111
142 Ga0466970_0083182 3300044765 Bacteria 1732
143 Ga0466970_0097895 3300044765 Bacteria 1596
144 Ga0466957_0011743 3300044842 Bacteria 5061
145 Ga0466957_0250477 3300044842 Bacteria 1178
146 Ga0466960_0061492 3300044901 Bacteria 1844
147 Ga0466960_0450503 3300044901 Bacteria 748
148 Ga0466960_0465497 3300044901 Bacteria 736
149 Ga0466959_0111057 3300045049 Bacteria 1956
150 Ga0466967_0024419 3300045976 Bacteria 4969
151 Ga0466967_0065503 3300045976 Bacteria 3234
152 Ga0466967_0265107 3300045976 Bacteria 1644
153 Ga0466967_0404234 3300045976 Bacteria 1329
154 Ga0495627_145114 3300046453 Bacteria 664
155 Ga0495643_0000374 3300046522 Bacteria 60146
156 Ga0495635_0340797 3300046663 Bacteria 1001
157 Ga0496109_0240053 3300048912 Bacteria 1705
158 Ga0496114_0161404 3300048917 Bacteria 1949
159 Ga0501032_0058577 3300049569 Bacteria 2586
160 Ga0501033_0144168 3300049570 Bacteria 1721
161 Ga0501034_0041873 3300049571 Bacteria 4634
162 Ga0501034_0381297 3300049571 Bacteria 1335
163 Ga0501046_0086958 3300049580 Bacteria 2409
164 Ga0501047_0051687 3300049581 Bacteria 3971
165 Ga0501067_0058624 3300049583 Bacteria 2132
166 Ga0501068_0264781 3300049584 Bacteria 1097
167 Ga0501069_0140146 3300049585 Bacteria 1387
168 Ga0501070_0032860 3300049586 Bacteria 4340
169 Ga0501070_0165690 3300049586 Bacteria 1821
170 Ga0501070_0564451 3300049586 Bacteria 910
171 Ga0501080_0610507 3300049742 Bacteria 968
172 Ga0501035_0152318 3300049822 Bacteria 2006
173 Ga0501044_0142531 3300049823 Bacteria 2384
174 Ga0501044_0589446 3300049823 Bacteria 1006
175 nmdc:mga03n38_67826_c1 3300050490 Bacteria 1643
176 nmdc:mga0yw44_112337_c1 3300050492 Bacteria 1747
177 nmdc:mga0yw44_140882_c1 3300050492 Bacteria 1567
178 nmdc:mga0yw44_167739_c1 3300050492 Bacteria 1440
179 nmdc:mga0yw44_176258_c1 3300050492 Bacteria 1406
180 nmdc:mga0yw44_80126_c1 3300050492 Bacteria 2045
181 nmdc:mga06z11_145345_c1 3300050494 Bacteria 1343
182 nmdc:mga06z11_4149_c1 3300050494 Bacteria 5666
183 nmdc:mga07m45_82003_c1 3300050496 Bacteria 1842
184 nmdc:mga08y16_235393_c1 3300050511 Bacteria 1894
185 Ga0500628_001951 3300053129 Bacteria 3467
186 Ga0466962_0021279 3300061719 Bacteria 3115
187 Ga0466962_0044257 3300061719 Bacteria 2129
188 Ga0466962_0108954 3300061719 Bacteria 1333
189 2774392799 2773857762 Bacteria 5971770
190 2809196621 2808606439 Bacteria 5952208
191 2812351243 2811994878 Bacteria 5992952
192 2891971139 2891968417 Bacteria 5821697
193 Ga0307409_100576007
194 LJQas_1006009
195 rootH1_10262794
196 Ga0070658_10190796
197 Ga0070683_100052115
198 Ga0070680_100545041
199 Ga0070682_100029317
200 Ga0070660_100067603
201 Ga0070692_10008997
202 Ga0070692_10094758
203 Ga0070668_100372779
204 Ga0070671_100595833
205 Ga0070674_100034885
206 Ga0070659_100039921
207 Ga0070701_10011491
208 Ga0070700_100000408
209 Ga0070663_100413286
210 Ga0070662_100000148
211 Ga0070662_100038050
212 Ga0070685_10022307
213 Ga0070685_10281276
214 Ga0070684_100023771
215 Ga0070684_100507475
216 Ga0068853_100060753
217 Ga0070686_100000226
218 Ga0070693_100114371
219 Ga0070664_100048945
220 Ga0070664_100133601
221 Ga0070664_100425312
222 Ga0068856_100063558
223 Ga0070702_100003095
224 Ga0068859_100686599
225 Ga0068861_100309483
226 Ga0068870_10004410
227 Ga0081539_10015245
228 Ga0075365_10013887
229 Ga0075365_10402273
230 Ga0075365_10508418
231 Ga0075368_10024072
232 Ga0075363_100005567
233 Ga0075363_100064311
234 Ga0075364_10023635
235 Ga0075364_10341368
236 Ga0075367_10007299
237 Ga0075367_10025079
238 Ga0075370_10064794
239 Ga0075428_100117157
240 Ga0075428_100379781
241 Ga0068865_100062690
242 Ga0097620_100686678
243 Ga0105245_10462437
244 Ga0114129_10946894
245 Ga0105243_10007143
246 Ga0105248_10018881
247 Ga0105248_11143509
248 Ga0105237_10537284
249 Ga0105238_10000003
250 Ga0105239_10009441
251 Ga0105239_10120771
252 Ga0157372_10313309
253 Ga0157372_10377346
254 Ga0157372_10589041
255 Ga0157375_10194856
256 Ga0163163_10022649
257 Ga0163163_10030016
258 Ga0157380_10344780
259 Ga0157377_10006028
260 Ga0207688_10010998
261 Ga0207647_10005947
262 Ga0207643_10007337
263 Ga0207643_10047965
264 Ga0207705_10487421
265 Ga0207671_10318770
266 Ga0207660_10100133
267 Ga0207657_10008485
268 Ga0207657_10114516
269 Ga0207652_10217350
270 Ga0207694_10000020
271 Ga0207659_10244924
272 Ga0207687_10280723
273 Ga0207706_10000235
274 Ga0207706_10055262
275 Ga0207709_10012414
276 Ga0207670_10057123
277 Ga0207669_10158271
278 Ga0207704_10015751
279 Ga0207704_10286442
280 Ga0207691_10002663
281 Ga0207691_10101103
282 Ga0207661_10439476
283 Ga0207679_10080489
284 Ga0207651_10150702
285 Ga0207712_10108535
286 Ga0207658_10773418
287 Ga0207677_10340946
288 Ga0207639_10072229
289 Ga0207678_10149024
290 Ga0207708_10000533
291 Ga0207702_10044925
292 Ga0207648_10006544
293 Ga0207674_10146981
294 Ga0207675_100017756
295 Ga0207675_100154297
296 Ga0207683_10113134
297 Ga0207698_10024789
298 Ga0209813_10042817
299 Ga0209813_10155308
300 Ga0265327_10023546
301 Ga0265314_10001624
302 Ga0307410_10199151
303 Ga0307410_10232483
304 Ga0307407_10062396
305 Ga0307407_10151767
306 Ga0307409_100009270
307 Ga0307409_100796832
308 Ga0307416_100003451
309 Ga0307416_100585293
310 Ga0307416_101093871
311 Ga0307415_100004810
312 Ga0307415_100303567
313 Ga0307415_100492603
314 Ga0373930_0025479
315 Ga0373959_0000186
316 Ga0373938_0107582
317 Ga0395899_0037091
318 Ga0395899_0051508
319 Ga0395900_0142465
320 Ga0395898_0082030
321 Ga0395905_0021080
322 Ga0395901_0008955
323 Ga0466965_0009513
324 Ga0466965_0047815
325 Ga0466965_0144806
326 Ga0466966_0008745
327 Ga0466961_0064094
328 Ga0466961_0122323
329 Ga0466963_0057166
330 Ga0466963_0102593
331 Ga0466971_0160575
332 Ga0466970_0021026
333 Ga0466970_0055726
334 Ga0466970_0083182
335 Ga0466970_0097895
336 Ga0466957_0011743
337 Ga0466957_0250477
338 Ga0466960_0061492
339 Ga0466960_0450503
340 Ga0466960_0465497
341 Ga0466959_0111057
342 Ga0466967_0024419
343 Ga0466967_0065503
344 Ga0466967_0265107
345 Ga0466967_0404234
346 Ga0495627_145114
347 Ga0495643_0000374
348 Ga0495635_0340797
349 Ga0496109_0240053
350 Ga0496114_0161404
351 Ga0501032_0058577
352 Ga0501033_0144168
353 Ga0501034_0041873
354 Ga0501034_0381297
355 Ga0501046_0086958
356 Ga0501047_0051687
357 Ga0501067_0058624
358 Ga0501068_0264781
359 Ga0501069_0140146
360 Ga0501070_0032860
361 Ga0501070_0165690
362 Ga0501070_0564451
363 Ga0501080_0610507
364 Ga0501035_0152318
365 Ga0501044_0142531
366 Ga0501044_0589446
367 nmdc:mga03n38_67826_c1
368 nmdc:mga0yw44_112337_c1
369 nmdc:mga0yw44_140882_c1
370 nmdc:mga0yw44_167739_c1
371 nmdc:mga0yw44_176258_c1
372 nmdc:mga0yw44_80126_c1
373 nmdc:mga06z11_145345_c1
374 nmdc:mga06z11_4149_c1
375 nmdc:mga07m45_82003_c1
376 nmdc:mga08y16_235393_c1
377 Ga0500628_001951
378 Ga0466962_0021279
379 Ga0466962_0044257
380 Ga0466962_0108954
381 2774392799
382 2809196621
383 2812351243
384 2891971139

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02224

Cytidylate_kin

Cytidylate kinase

22

236

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r8c-assembly1.cif.gz_B crystal structure of cytidylate kinase (cmk) from mycobacterium abscessus 0.9663 15 231
4die-assembly4.cif.gz_B crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.958 15 231
4die-assembly6.cif.gz_D crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.9538 15 231
4die-assembly3.cif.gz_A crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.9526 15 231
4die-assembly5.cif.gz_C crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.9484 15 231
ID Description Score Start End Superfamily
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.958 15 231 3.40.50.300
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9396 15 231 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9155 15 231 3.40.50.300
af_Q2FYF5_1_183_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9021 49 231 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8992 15 231 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7K2NVJ5-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9988 15 164 GO:0004127
GO:0005524
AF-A0A7J5E567-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9928 14 231 GO:0004127
GO:0005524
GO:0005737
GO:0006220
AF-A0A6I3JH73-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9912 15 233 GO:0004127
GO:0005524
GO:0005737
GO:0006220
AF-A0A3A5HBF3-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9899 20 235 GO:0005524
GO:0005737
GO:0006220
GO:0036430
GO:0036431
AF-A0A2T8F566-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9892 15 235 GO:0005524
GO:0005829
GO:0006220
GO:0015949
GO:0036430
GO:0036431

Map