F295234

General Info

Members Datasets Scaffolds Average Seq Length
192 85 384 307

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100200427|Ga0070705_1002004271
Length 297
Sequence MKRLTADQVTTGFIGLGNMGSRIAQRLLDHGYRLSVYDMDLAKADAIAAHGGVVSKNIRELARTADVLLSCLTNDEAVRSVFTGPEGVFAGARSGTVVLEMSTISPESSRELHRLAISGSTPAAEEGILTLLVGGNRELFRAAEPIFQAIAKQYFLLGGPGSGTAMKLVVNTLLGVGMQAIAEAVVLGEKAGLDRARLLEVLSQTAVIAPAHVGKLARAAINDYSPQFPLRLMNKDFRLILKAAAQEHLPMPVTEAAFRVNLGELAHNPEEEDFSAVLRRMEEVAGITAPHAALLTS

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
42 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
60 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
78 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
83 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
84 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.4
Metatranscriptomes 2.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.12
Rhizosphere 96.88
Stem 0
Stem Tuber 0
Unclassified 20.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100200427 3300005440 Bacteria 1368
2 Ga0070690_100164148 3300005330 Bacteria 1524
3 Ga0070668_100252570 3300005347 Bacteria 1464
4 Ga0070669_100373197 3300005353 Unclassified 1162
5 Ga0070709_10012411 3300005434 Bacteria 4769
6 Ga0070709_10071558 3300005434 Bacteria 2239
7 Ga0070709_10097913 3300005434 Unclassified 1948
8 Ga0070713_100017644 3300005436 Bacteria 5404
9 Ga0070713_100032345 3300005436 Bacteria 4177
10 Ga0070713_100042259 3300005436 Bacteria 3719
11 Ga0070713_100086874 3300005436 Bacteria 2682
12 Ga0070713_100152549 3300005436 Unclassified 2057
13 Ga0070713_100153429 3300005436 Bacteria 2051
14 Ga0070713_100259193 3300005436 Bacteria 1589
15 Ga0070710_10143526 3300005437 Bacteria 1466
16 Ga0070711_100000154 3300005439 Bacteria 36893
17 Ga0070711_100012359 3300005439 Bacteria 5330
18 Ga0070711_100123301 3300005439 Unclassified 1920
19 Ga0070711_100230241 3300005439 Bacteria 1444
20 Ga0070705_100085469 3300005440 Bacteria 1950
21 Ga0070708_100035888 3300005445 Bacteria 4322
22 Ga0070708_100122569 3300005445 Bacteria 2400
23 Ga0070708_100164179 3300005445 Bacteria 2071
24 Ga0070708_100197892 3300005445 Unclassified 1880
25 Ga0070708_100234216 3300005445 Bacteria 1723
26 Ga0070706_100002354 3300005467 Bacteria 19078
27 Ga0070706_100076032 3300005467 Bacteria 3108
28 Ga0070706_100091492 3300005467 Unclassified 2821
29 Ga0070706_100129160 3300005467 Bacteria 2358
30 Ga0070706_100167584 3300005467 Bacteria 2051
31 Ga0070706_100277341 3300005467 Bacteria 1564
32 Ga0070706_100552384 3300005467 Unclassified 1071
33 Ga0070707_100088050 3300005468 Bacteria 3004
34 Ga0070707_100099209 3300005468 Unclassified 2821
35 Ga0070707_100130549 3300005468 Bacteria 2443
36 Ga0070707_100154940 3300005468 Bacteria 2232
37 Ga0070707_100167950 3300005468 Bacteria 2138
38 Ga0070698_100007240 3300005471 Bacteria 12018
39 Ga0070698_100020132 3300005471 Bacteria 6995
40 Ga0070698_100097205 3300005471 Bacteria 2920
41 Ga0070698_100112667 3300005471 Bacteria 2685
42 Ga0070699_100022922 3300005518 Bacteria 5379
43 Ga0070699_100031149 3300005518 Bacteria 4606
44 Ga0070699_100145434 3300005518 Unclassified 2094
45 Ga0070699_100162545 3300005518 Bacteria 1976
46 Ga0070699_100200225 3300005518 Bacteria 1776
47 Ga0070697_100000668 3300005536 Bacteria 25780
48 Ga0070697_100004903 3300005536 Bacteria 10271
49 Ga0070697_100006590 3300005536 Bacteria 9001
50 Ga0070697_100008888 3300005536 Bacteria 7845
51 Ga0070697_100024276 3300005536 Unclassified 4826
52 Ga0070697_100038409 3300005536 Bacteria 3868
53 Ga0070697_100051117 3300005536 Bacteria 3357
54 Ga0070697_100112625 3300005536 Bacteria 2269
55 Ga0070686_100003895 3300005544 Bacteria 8204
56 Ga0070696_100367383 3300005546 Bacteria 1118
57 Ga0068859_100083374 3300005617 Bacteria 3240
58 Ga0068866_10029536 3300005718 Unclassified 2623
59 Ga0068863_100145923 3300005841 Bacteria 2263
60 Ga0068860_100004356 3300005843 Bacteria 14466
61 Ga0070717_10000952 3300006028 Bacteria 19283
62 Ga0070717_10000994 3300006028 Bacteria 18994
63 Ga0070716_100002355 3300006173 Bacteria 8696
64 Ga0070716_100023158 3300006173 Bacteria 3290
65 Ga0070716_100042351 3300006173 Bacteria 2542
66 Ga0070716_100130666 3300006173 Bacteria 1587
67 Ga0070716_100219649 3300006173 Unclassified 1276
68 Ga0070716_100248114 3300006173 Unclassified 1211
69 Ga0070712_100000126 3300006175 Bacteria 40420
70 Ga0070712_100016817 3300006175 Bacteria 4730
71 Ga0070712_100212092 3300006175 Bacteria 1528
72 Ga0075428_100102579 3300006844 Bacteria 3119
73 Ga0075431_100031862 3300006847 Bacteria 5430
74 Ga0075433_10051653 3300006852 Bacteria 3580
75 Ga0075433_10074194 3300006852 Bacteria 2993
76 Ga0075434_100179265 3300006871 Bacteria 2138
77 Ga0075436_100001612 3300006914 Bacteria 15432
78 Ga0075436_100074656 3300006914 Bacteria 2348
79 Ga0097620_100083371 3300006931 Bacteria 3240
80 Ga0075435_100141806 3300007076 Bacteria 2016
81 Ga0099794_10001716 3300007265 Bacteria 7765
82 Ga0099794_10001956 3300007265 Bacteria 7418
83 Ga0099794_10003414 3300007265 Bacteria 6053
84 Ga0099794_10017073 3300007265 Unclassified 3230
85 Ga0099794_10017084 3300007265 Bacteria 3229
86 Ga0099794_10022823 3300007265 Bacteria 2856
87 Ga0099794_10086377 3300007265 Bacteria 1553
88 Ga0099794_10096009 3300007265 Unclassified 1475
89 Ga0099794_10153365 3300007265 Unclassified 1170
90 Ga0099795_10006530 3300007788 Bacteria 3188
91 Ga0099795_10009076 3300007788 Bacteria 2870
92 Ga0099795_10054290 3300007788 Unclassified 1469
93 Ga0099795_10085527 3300007788 Bacteria 1214
94 Ga0105245_10000076 3300009098 Bacteria 102308
95 Ga0105245_10435915 3300009098 Bacteria 1316
96 Ga0105242_10039684 3300009176 Bacteria 3790
97 Ga0105248_10126719 3300009177 Bacteria 2880
98 Ga0099796_10009824 3300010159 Bacteria 2606
99 Ga0099796_10010742 3300010159 Unclassified 2528
100 Ga0099796_10011119 3300010159 Bacteria 2500
101 Ga0105239_10057604 3300010375 Bacteria 4262
102 Ga0157378_10001275 3300013297 Bacteria 22626
103 Ga0163162_10005538 3300013306 Bacteria 12206
104 Ga0157379_10203990 3300014968 Bacteria 1788
105 Ga0224570_100165 3300022730 Bacteria 4503
106 Ga0228598_1003540 3300024227 Bacteria 3358
107 Ga0207653_10006222 3300025885 Bacteria 3723
108 Ga0207642_10052869 3300025899 Bacteria 1845
109 Ga0207699_10009742 3300025906 Bacteria 4795
110 Ga0207684_10006233 3300025910 Bacteria 10892
111 Ga0207684_10009813 3300025910 Bacteria 8444
112 Ga0207684_10017453 3300025910 Bacteria 6156
113 Ga0207684_10043650 3300025910 Bacteria 3801
114 Ga0207684_10044570 3300025910 Unclassified 3762
115 Ga0207684_10116081 3300025910 Unclassified 2293
116 Ga0207684_10343919 3300025910 Bacteria 1284
117 Ga0207693_10000102 3300025915 Bacteria 76687
118 Ga0207693_10065452 3300025915 Unclassified 2847
119 Ga0207663_10020019 3300025916 Unclassified 3783
120 Ga0207663_10169486 3300025916 Bacteria 1549
121 Ga0207663_10335877 3300025916 Bacteria 1140
122 Ga0207646_10000657 3300025922 Bacteria 44736
123 Ga0207646_10020060 3300025922 Bacteria 6199
124 Ga0207646_10035535 3300025922 Bacteria 4500
125 Ga0207646_10071757 3300025922 Bacteria 3093
126 Ga0207646_10101789 3300025922 Bacteria 2575
127 Ga0207646_10140571 3300025922 Bacteria 2174
128 Ga0207687_10000104 3300025927 Bacteria 61420
129 Ga0207700_10012490 3300025928 Bacteria 5480
130 Ga0207700_10025909 3300025928 Bacteria 4081
131 Ga0207700_10048908 3300025928 Unclassified 3142
132 Ga0207700_10080800 3300025928 Bacteria 2536
133 Ga0207700_10096338 3300025928 Bacteria 2349
134 Ga0207700_10253478 3300025928 Bacteria 1504
135 Ga0207664_10081024 3300025929 Bacteria 2640
136 Ga0207664_10285344 3300025929 Unclassified 1449
137 Ga0207686_10116086 3300025934 Bacteria 1814
138 Ga0207665_10000318 3300025939 Bacteria 33337
139 Ga0207665_10000670 3300025939 Bacteria 23066
140 Ga0207665_10009054 3300025939 Bacteria 6536
141 Ga0207665_10032898 3300025939 Unclassified 3434
142 Ga0207665_10048941 3300025939 Bacteria 2839
143 Ga0207665_10049090 3300025939 Bacteria 2835
144 Ga0207665_10084326 3300025939 Bacteria 2193
145 Ga0207665_10191104 3300025939 Unclassified 1487
146 Ga0207711_10077620 3300025941 Bacteria 2895
147 Ga0207668_10272575 3300025972 Bacteria 1384
148 Ga0207641_10137343 3300026088 Bacteria 2202
149 Ga0209588_1000850 3300027671 Bacteria 7787
150 Ga0209588_1004630 3300027671 Unclassified 3895
151 Ga0209588_1018509 3300027671 Unclassified 2169
152 Ga0209588_1026199 3300027671 Unclassified 1849
153 Ga0265354_1004640 3300028016 Unclassified 1430
154 Ga0265356_1000001 3300028017 Bacteria 47844
155 Ga0268264_10114508 3300028381 Bacteria 2367
156 Ga0265338_10062240 3300028800 Bacteria 3263
157 Ga0265338_10177209 3300028800 Unclassified 1629
158 Ga0265338_10180051 3300028800 Unclassified 1612
159 Ga0265338_10235089 3300028800 Unclassified 1361
160 Ga0265338_10361966 3300028800 Unclassified 1041
161 Ga0265762_1000748 3300030760 Bacteria 5797
162 Ga0265762_1003928 3300030760 Bacteria 2663
163 Ga0265760_10002668 3300031090 Bacteria 5221
164 Ga0265760_10008433 3300031090 Bacteria 2948
165 Ga0265760_10040413 3300031090 Unclassified 1389
166 Ga0265325_10028527 3300031241 Bacteria 3008
167 Ga0265340_10135884 3300031247 Unclassified 1126
168 Ga0265342_10159511 3300031712 Unclassified 1247
169 Ga0373954_0001506 3300035118 Bacteria 9470
170 Ga0373937_0016676 3300036401 Bacteria 6527
171 Ga0451577_0147274 3300042876 Bacteria 2118
172 Ga0453683_0000812 3300044673 Bacteria 30553
173 Ga0453683_0047789 3300044673 Bacteria 2683
174 Ga0453684_0360745 3300044712 Bacteria 1636
175 Ga0495652_0093246 3300046529 Bacteria 2459
176 Ga0495675_0131212 3300047444 Bacteria 1557
177 Ga0496103_0108195 3300048906 Bacteria 1764
178 Ga0496105_0006555 3300048908 Bacteria 8955
179 Ga0496105_0047730 3300048908 Unclassified 3534
180 Ga0496105_0143330 3300048908 Unclassified 1966
181 Ga0496106_0006560 3300048909 Bacteria 8620
182 Ga0496115_0001104 3300048918 Bacteria 19472
183 nmdc:mga05p37_283012_c1 3300050507 Bacteria 1977
184 nmdc:mga09592_152569_c1 3300050508 Bacteria 1994
185 nmdc:mga06r32_253737_c1 3300050510 Bacteria 1747
186 nmdc:mga0n895_18186_c1 3300050512 Bacteria 6498
187 nmdc:mga0rr50_89009_c1 3300050513 Bacteria 2400
188 nmdc:mga08x19_107116_c1 3300050514 Unclassified 1860
189 nmdc:mga08x19_145675_c1 3300050514 Bacteria 1602
190 nmdc:mga08x19_8048_c1 3300050514 Bacteria 6267
191 nmdc:mga0a205_3815_c1 3300050515 Bacteria 13507
192 nmdc:mga0a205_76026_c2 3300050515 Bacteria 1824
193 Ga0070705_100200427
194 Ga0070690_100164148
195 Ga0070668_100252570
196 Ga0070669_100373197
197 Ga0070709_10012411
198 Ga0070709_10071558
199 Ga0070709_10097913
200 Ga0070713_100017644
201 Ga0070713_100032345
202 Ga0070713_100042259
203 Ga0070713_100086874
204 Ga0070713_100152549
205 Ga0070713_100153429
206 Ga0070713_100259193
207 Ga0070710_10143526
208 Ga0070711_100000154
209 Ga0070711_100012359
210 Ga0070711_100123301
211 Ga0070711_100230241
212 Ga0070705_100085469
213 Ga0070708_100035888
214 Ga0070708_100122569
215 Ga0070708_100164179
216 Ga0070708_100197892
217 Ga0070708_100234216
218 Ga0070706_100002354
219 Ga0070706_100076032
220 Ga0070706_100091492
221 Ga0070706_100129160
222 Ga0070706_100167584
223 Ga0070706_100277341
224 Ga0070706_100552384
225 Ga0070707_100088050
226 Ga0070707_100099209
227 Ga0070707_100130549
228 Ga0070707_100154940
229 Ga0070707_100167950
230 Ga0070698_100007240
231 Ga0070698_100020132
232 Ga0070698_100097205
233 Ga0070698_100112667
234 Ga0070699_100022922
235 Ga0070699_100031149
236 Ga0070699_100145434
237 Ga0070699_100162545
238 Ga0070699_100200225
239 Ga0070697_100000668
240 Ga0070697_100004903
241 Ga0070697_100006590
242 Ga0070697_100008888
243 Ga0070697_100024276
244 Ga0070697_100038409
245 Ga0070697_100051117
246 Ga0070697_100112625
247 Ga0070686_100003895
248 Ga0070696_100367383
249 Ga0068859_100083374
250 Ga0068866_10029536
251 Ga0068863_100145923
252 Ga0068860_100004356
253 Ga0070717_10000952
254 Ga0070717_10000994
255 Ga0070716_100002355
256 Ga0070716_100023158
257 Ga0070716_100042351
258 Ga0070716_100130666
259 Ga0070716_100219649
260 Ga0070716_100248114
261 Ga0070712_100000126
262 Ga0070712_100016817
263 Ga0070712_100212092
264 Ga0075428_100102579
265 Ga0075431_100031862
266 Ga0075433_10051653
267 Ga0075433_10074194
268 Ga0075434_100179265
269 Ga0075436_100001612
270 Ga0075436_100074656
271 Ga0097620_100083371
272 Ga0075435_100141806
273 Ga0099794_10001716
274 Ga0099794_10001956
275 Ga0099794_10003414
276 Ga0099794_10017073
277 Ga0099794_10017084
278 Ga0099794_10022823
279 Ga0099794_10086377
280 Ga0099794_10096009
281 Ga0099794_10153365
282 Ga0099795_10006530
283 Ga0099795_10009076
284 Ga0099795_10054290
285 Ga0099795_10085527
286 Ga0105245_10000076
287 Ga0105245_10435915
288 Ga0105242_10039684
289 Ga0105248_10126719
290 Ga0099796_10009824
291 Ga0099796_10010742
292 Ga0099796_10011119
293 Ga0105239_10057604
294 Ga0157378_10001275
295 Ga0163162_10005538
296 Ga0157379_10203990
297 Ga0224570_100165
298 Ga0228598_1003540
299 Ga0207653_10006222
300 Ga0207642_10052869
301 Ga0207699_10009742
302 Ga0207684_10006233
303 Ga0207684_10009813
304 Ga0207684_10017453
305 Ga0207684_10043650
306 Ga0207684_10044570
307 Ga0207684_10116081
308 Ga0207684_10343919
309 Ga0207693_10000102
310 Ga0207693_10065452
311 Ga0207663_10020019
312 Ga0207663_10169486
313 Ga0207663_10335877
314 Ga0207646_10000657
315 Ga0207646_10020060
316 Ga0207646_10035535
317 Ga0207646_10071757
318 Ga0207646_10101789
319 Ga0207646_10140571
320 Ga0207687_10000104
321 Ga0207700_10012490
322 Ga0207700_10025909
323 Ga0207700_10048908
324 Ga0207700_10080800
325 Ga0207700_10096338
326 Ga0207700_10253478
327 Ga0207664_10081024
328 Ga0207664_10285344
329 Ga0207686_10116086
330 Ga0207665_10000318
331 Ga0207665_10000670
332 Ga0207665_10009054
333 Ga0207665_10032898
334 Ga0207665_10048941
335 Ga0207665_10049090
336 Ga0207665_10084326
337 Ga0207665_10191104
338 Ga0207711_10077620
339 Ga0207668_10272575
340 Ga0207641_10137343
341 Ga0209588_1000850
342 Ga0209588_1004630
343 Ga0209588_1018509
344 Ga0209588_1026199
345 Ga0265354_1004640
346 Ga0265356_1000001
347 Ga0268264_10114508
348 Ga0265338_10062240
349 Ga0265338_10177209
350 Ga0265338_10180051
351 Ga0265338_10235089
352 Ga0265338_10361966
353 Ga0265762_1000748
354 Ga0265762_1003928
355 Ga0265760_10002668
356 Ga0265760_10008433
357 Ga0265760_10040413
358 Ga0265325_10028527
359 Ga0265340_10135884
360 Ga0265342_10159511
361 Ga0373954_0001506
362 Ga0373937_0016676
363 Ga0451577_0147274
364 Ga0453683_0000812
365 Ga0453683_0047789
366 Ga0453684_0360745
367 Ga0495652_0093246
368 Ga0495675_0131212
369 Ga0496103_0108195
370 Ga0496105_0006555
371 Ga0496105_0047730
372 Ga0496105_0143330
373 Ga0496106_0006560
374 Ga0496115_0001104
375 nmdc:mga05p37_283012_c1
376 nmdc:mga09592_152569_c1
377 nmdc:mga06r32_253737_c1
378 nmdc:mga0n895_18186_c1
379 nmdc:mga0rr50_89009_c1
380 nmdc:mga08x19_107116_c1
381 nmdc:mga08x19_145675_c1
382 nmdc:mga08x19_8048_c1
383 nmdc:mga0a205_3815_c1
384 nmdc:mga0a205_76026_c2

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

10

159

0.97

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

161

281

0.96

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

10

83

0.88

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

1

102

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ws7-assembly1.cif.gz_A the 1.18 a resolution structure of l-serine 3-dehydrogenase complexed with nadp+ and sulfate ion from the hyperthermophilic archaeon pyrobaculum calidifontis 0.9376 6 260
3w6z-assembly1.cif.gz_A crystal structure of nadp bound l-serine 3-dehydrogenase (k170m) from hyperthermophilic archaeon pyrobaculum calidifontis 0.9367 6 260
3w6u-assembly1.cif.gz_A crystal structure of nadp bound l-serine 3-dehydrogenase from hyperthermophilic archaeon pyrobaculum calidifontis 0.936 7 260
5xvh-assembly1.cif.gz_A-2 crystal structure of the nadp+ and tartrate-bound complex of l-serine 3-dehydrogenase from the hyperthermophilic archaeon pyrobaculum calidifontis 0.9349 4 260
3doj-assembly1.cif.gz_A structure of glyoxylate reductase 1 from arabidopsis (atglyr1) 0.9266 7 260
ID Description Score Start End Superfamily
af_Q4DFE2_2_165_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9753 5 166 3.40.50.720
af_Q9XTI0_3_164_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9749 8 166 3.40.50.720
3ws7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9737 6 167 3.40.50.720
1vpdA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9733 8 167 3.40.50.720
af_Q9C991_11_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9716 3 166 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A539E7Y2-F1-model_v4 2-hydroxy-3-oxopropionate reductase 0.9855 17 187 GO:0050661
AF-A0A534H702-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9804 7 168 GO:0006574
GO:0008442
GO:0050661
AF-A0A6L7WWA0-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9778 7 118 GO:0016491
GO:0050661
AF-A0A352R3Y4-F1-model_v4 6-phosphogluconate dehydrogenase NADP-binding domain-containing protein 0.9761 6 155 GO:0016491
GO:0050661
AF-A0A1R1BDY8-F1-model_v4 6-phosphogluconate dehydrogenase 0.9757 7 109 GO:0016491
GO:0050661

Map