F294947

General Info

Members Datasets Scaffolds Average Seq Length
192 170 134 514

Family's Representative Sequence

Representative Sequence 3300002987|JGI25159J45721_1000063|JGI25159J45721_100006323
Length 546
Sequence MGEVGNLAGGGYPSPEATTLSLDGKGSLPTSPLPVTAVSRNPALRLSGISKRFGPLRANEAISFELKRGEVIALLGENGAGKTTLMNILFGHYVADEGTVEAFGKPLPPGDPRAALDAGIGMVHQHFTLADNMTVQENIALGTQSLWRMRLDRAAARRRIEQLSADFGLAVEPAATVSTLSVGERQRVEILKALYREARLLILDEPTAVLTPAETDALFRTLKLLVANGLSIIFISHKLHEVMSVSDRVLVLRSGRLVGERETGSTDRKELAALMVGQEVKPAEVNPVKRGAPLLALERVSTTPYNGAGLDQVSLTLTAGEITGLAGVAGNGQAGLAALIAGIRRPTTGSISIAGREVADWSPRAALAHGVARIPEDRHAIGSIGDMSVTENVIGERYRSPRFSRMGFLNWRAARGFAEKLITDYEVKCPSPEARMRLLSGGNMQKLILGRALDPDPTVILASQPTRGLDVGAVAYVHRMLLEARDRGAAILLISEDLEEVLALSDRVIVMSKGRLSTPSSRGERSIRQLGELMAGHDGERGDHAA

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
4 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
7 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
8 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
9 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
10 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
11 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
12 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
13 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
14 2643221557 Ensifer sp. Root558 Isolate Unclassified
15 2643221591 Devosia sp. Root685 Isolate Unclassified
16 2643221618 Ensifer sp. Root231 Isolate Unclassified
17 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
18 2643221626 Ensifer sp. Root31 Isolate Unclassified
19 2643221655 Ensifer sp. Root1252 Isolate Unclassified
20 2643221659 Ensifer sp. Root127 Isolate Unclassified
21 2643221668 Ensifer sp. Root423 Isolate Unclassified
22 2643221698 Ensifer sp. Root142 Isolate Unclassified
23 2643221712 Ensifer sp. Root258 Isolate Unclassified
24 2643221723 Ensifer sp. Root278 Isolate Unclassified
25 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
26 2738543024 Aminobacter sp. AP02 Isolate Unclassified
27 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
28 2791355263 Rhizobium chutanense C5 Isolate Nodule
29 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
30 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
31 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
32 2844163670 Ensifer sp. 1H6 Isolate Unclassified
33 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
34 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
35 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
36 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
37 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
38 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
39 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
40 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
41 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
42 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
43 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
44 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
45 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
46 2932401849 Devosia sp. 2618 Isolate Rhizosphere
47 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
48 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
49 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
50 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
51 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
52 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
53 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
54 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
55 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
56 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
57 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
58 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
59 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
60 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
61 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
62 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
63 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
64 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
65 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
66 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
67 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
68 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
69 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
70 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
71 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
72 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
73 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
74 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
79 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
80 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
81 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
82 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
83 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
84 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
105 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
106 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
115 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
160 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
163 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 641522639 Methylobacterium sp. 4-46 Isolate Nodule
167 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
168 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
169 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
170 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 69.79
Metatranscriptomes 0
Isolates 30.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.54
Nodule 10.94
Rhizoplane 2.08
Rhizosphere 51.04
Stem 0
Stem Tuber 0
Unclassified 22.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000063 3300002987 Bacteria 52012
2 JGI25151J46595_10019409 3300003187 Bacteria 2889
3 JGI25160J50197_1000189 3300003354 Bacteria 52012
4 Ga0055526_1003046 3300003771 Bacteria 10887
5 Ga0055536_1003647 3300003781 Bacteria 8202
6 Ga0055530_10010955 3300003791 Bacteria 3295
7 Ga0055543_1000385 3300004625 Bacteria 28627
8 Ga0065165_1000610 3300005262 Bacteria 51983
9 Ga0070677_10010504 3300005333 Bacteria 3169
10 Ga0068869_100060756 3300005334 Bacteria 2770
11 Ga0070680_100058502 3300005336 Bacteria 3152
12 Ga0070674_100002266 3300005356 Bacteria 10622
13 Ga0070667_100125635 3300005367 Bacteria 2235
14 Ga0070678_100033056 3300005456 Bacteria 3587
15 Ga0070707_100013599 3300005468 Bacteria 7619
16 Ga0070679_100047110 3300005530 Bacteria 4298
17 Ga0070665_100221658 3300005548 Bacteria 1892
18 Ga0068862_100053334 3300005844 Bacteria 3461
19 Ga0081539_10003131 3300005985 Bacteria 21094
20 Ga0075368_10000871 3300006042 Bacteria 9345
21 Ga0075431_100014099 3300006847 Bacteria 8079
22 Ga0075431_100166517 3300006847 Bacteria 2266
23 Ga0075431_100190318 3300006847 Bacteria 2102
24 Ga0111539_10000042 3300009094 Bacteria 129513
25 Ga0111539_10020968 3300009094 Bacteria 8047
26 Ga0111539_10220456 3300009094 Bacteria 2209
27 Ga0114129_10122251 3300009147 Bacteria 3582
28 Ga0114129_10449867 3300009147 Bacteria 1689
29 Ga0105243_10116384 3300009148 Bacteria 2246
30 Ga0171463_1009 3300013249 Bacteria 288284
31 Ga0183363_1331 3300015690 Bacteria 5959
32 Ga0214542_1020728 3300021321 Bacteria 4732
33 Ga0214543_1000012 3300021327 Bacteria 338982
34 Ga0228710_1000227 3300022740 Bacteria 59028
35 Ga0209436_100282 3300025208 Bacteria 23387
36 Ga0209130_1000147 3300025284 Bacteria 109796
37 Ga0209676_1000905 3300025292 Bacteria 37293
38 Ga0209676_1007637 3300025292 Bacteria 5015
39 Ga0209025_1000240 3300025294 Bacteria 128397
40 Ga0209564_1000819 3300025295 Bacteria 42329
41 Ga0209050_1003839 3300025298 Bacteria 10711
42 Ga0207426_1000267 3300025302 Bacteria 109797
43 Ga0209257_1007536 3300025304 Bacteria 6539
44 Ga0207680_10080587 3300025903 Bacteria 2044
45 Ga0207669_10001006 3300025937 Bacteria 12016
46 Ga0207691_10021875 3300025940 Bacteria 6036
47 Ga0207689_10034576 3300025942 Bacteria 4197
48 Ga0207658_10149647 3300025986 Bacteria 1900
49 Ga0207683_10015529 3300026121 Bacteria 6484
50 Ga0209813_10000296 3300027866 Bacteria 13724
51 Ga0207428_10000110 3300027907 Bacteria 111885
52 Ga0268266_10058003 3300028379 Bacteria 3333
53 Ga0307515_10000115 3300028794 Bacteria 193697
54 Ga0307513_10000931 3300031456 Bacteria 42258
55 Ga0307508_10001111 3300031616 Bacteria 31133
56 Ga0307413_10007858 3300031824 Bacteria 4989
57 Ga0307507_10050320 3300033179 Bacteria 4024
58 Ga0400483_243757 3300039062 Bacteria 12596
59 Ga0439435_0006868 3300042436 Bacteria 2577
60 Ga0453684_0000240 3300044712 Bacteria 235672
61 Ga0453684_0001429 3300044712 Bacteria 68492
62 Ga0453684_0024996 3300044712 Bacteria 8692
63 Ga0453684_0026257 3300044712 Bacteria 8424
64 Ga0453684_0084836 3300044712 Bacteria 3938
65 Ga0451576_0044420 3300045051 Bacteria 4683
66 Ga0451576_0066161 3300045051 Bacteria 3763
67 Ga0495629_0005581 3300046459 Bacteria 9391
68 Ga0495651_0041721 3300046462 Bacteria 3564
69 Ga0495605_0061750 3300046474 Bacteria 1792
70 Ga0495583_0018199 3300046506 Bacteria 3705
71 Ga0495606_0009756 3300046507 Bacteria 8076
72 Ga0495648_0002079 3300046524 Bacteria 18947
73 Ga0495598_0008592 3300046537 Bacteria 2385
74 Ga0495625_0078136 3300046660 Bacteria 2310
75 Ga0495635_0002549 3300046663 Bacteria 12471
76 Ga0495657_0008875 3300046675 Bacteria 7652
77 Ga0495624_0026696 3300046690 Bacteria 3783
78 Ga0495671_0029581 3300046692 Bacteria 2812
79 Ga0495649_0007944 3300046694 Bacteria 6418
80 Ga0495600_0001335 3300046809 Bacteria 13606
81 Ga0495674_0122915 3300047319 Bacteria 2192
82 Ga0495593_0036877 3300047673 Bacteria 2648
83 Ga0495602_0037607 3300048088 Bacteria 4488
84 Ga0496110_0031090 3300048913 Bacteria 4605
85 Ga0496111_0051834 3300048914 Bacteria 2963
86 Ga0496115_0066988 3300048918 Bacteria 2903
87 Ga0496119_0002273 3300048922 Bacteria 21338
88 Ga0496121_0046557 3300048924 Bacteria 3711
89 Ga0496124_0050861 3300048927 Bacteria 3528
90 Ga0496124_0175101 3300048927 Bacteria 1657
91 Ga0496125_0003961 3300048928 Bacteria 17450
92 Ga0496126_0005694 3300048929 Bacteria 14118
93 Ga0496126_0047761 3300048929 Bacteria 3917
94 Ga0501031_0004317 3300049568 Bacteria 9198
95 Ga0501032_0000001 3300049569 Bacteria 422097
96 Ga0501033_0000198 3300049570 Bacteria 57365
97 Ga0501034_0000036 3300049571 Bacteria 239274
98 Ga0501034_0039917 3300049571 Bacteria 4754
99 Ga0501036_0000046 3300049572 Bacteria 76444
100 Ga0501036_0105673 3300049572 Bacteria 2381
101 Ga0501037_0000017 3300049573 Bacteria 157276
102 Ga0501038_0000153 3300049574 Bacteria 59196
103 Ga0501039_0000011 3300049575 Bacteria 245124
104 Ga0501039_0012844 3300049575 Bacteria 6403
105 Ga0501043_0000016 3300049579 Bacteria 170869
106 Ga0501043_0020338 3300049579 Bacteria 5207
107 Ga0501046_0029889 3300049580 Bacteria 4427
108 Ga0501046_0036534 3300049580 Bacteria 3953
109 Ga0501072_0022649 3300049588 Bacteria 4873
110 Ga0501074_0005534 3300049590 Bacteria 9084
111 Ga0501075_0031142 3300049591 Bacteria 3958
112 Ga0501076_0008313 3300049592 Bacteria 7605
113 Ga0501076_0028426 3300049592 Bacteria 4342
114 Ga0501076_0083659 3300049592 Bacteria 2563
115 Ga0501077_0039433 3300049593 Bacteria 3009
116 Ga0501080_0101303 3300049742 Bacteria 2672
117 Ga0501081_0027842 3300049743 Bacteria 3811
118 Ga0501035_0000028 3300049822 Bacteria 179195
119 Ga0501044_0003716 3300049823 Bacteria 17148
120 Ga0501045_0001466 3300049824 Bacteria 15696
121 nmdc:mga06z11_5597_c1 3300050494 Bacteria 5053
122 nmdc:mga04h51_591_c1 3300050495 Bacteria 8655
123 nmdc:mga05p37_102151_c1 3300050507 Bacteria 3531
124 nmdc:mga06r32_150532_c1 3300050510 Bacteria 2305
125 nmdc:mga06r32_6672_c1 3300050510 Bacteria 10374
126 nmdc:mga08y16_47_c1 3300050511 Bacteria 111829
127 Ga0500578_0041591 3300053086 Bacteria 2951
128 Ga0500642_0001799 3300053130 Bacteria 6193
129 Ga0500568_0000086 3300053139 Bacteria 90828
130 Ga0500604_0000129 3300053151 Bacteria 23062
131 Ga0500637_0005139 3300053178 Bacteria 6306
132 Ga0501084_0011912 3300054114 Bacteria 7201
133 Ga0501084_0173658 3300054114 Bacteria 1819
134 Ga0501082_0000904 3300060353 Bacteria 26090

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2848858292 2848864857 419
2 3300039062 Ga0400483_243757 Ga0400483_243757_414_1952 466
3 iso_pu_bacteria 2551306087 2551701977 471
4 3300006847 Ga0075431_100166517 Ga0075431_1001665172 480
5 3300009094 Ga0111539_10020968 Ga0111539_100209686 480
6 3300050510 nmdc:mga06r32_150532_c1 nmdc:mga06r32_150532_c1_704_2254 480
7 3300053178 Ga0500637_0005139 Ga0500637_0005139_4529_5977 480
8 3300054114 Ga0501084_0173658 Ga0501084_0173658_160_1686 485
9 3300006042 Ga0075368_10000871 Ga0075368_100008715 487
10 3300027866 Ga0209813_10000296 Ga0209813_100002968 487
11 3300050494 nmdc:mga06z11_5597_c1 nmdc:mga06z11_5597_c1_3150_4691 487
12 3300050495 nmdc:mga04h51_591_c1 nmdc:mga04h51_591_c1_1830_3371 487
13 3300044712 Ga0453684_0000240 Ga0453684_0000240_212647_214119 488
14 3300046537 Ga0495598_0008592 Ga0495598_0008592_743_2284 488
15 3300053139 Ga0500568_0000086 Ga0500568_0000086_15946_17415 488
16 3300049588 Ga0501072_0022649 Ga0501072_0022649_996_2546 489
17 3300006847 Ga0075431_100190318 Ga0075431_1001903182 492
18 3300009094 Ga0111539_10220456 Ga0111539_102204562 492
19 3300044712 Ga0453684_0001429 Ga0453684_0001429_45988_47487 492
20 3300009148 Ga0105243_10116384 Ga0105243_101163842 495
21 3300028794 Ga0307515_10000115 Ga0307515_1000011525 495
22 3300031456 Ga0307513_10000931 Ga0307513_1000093131 495
23 3300044712 Ga0453684_0026257 Ga0453684_0026257_2344_3843 497
24 3300044712 Ga0453684_0024996 Ga0453684_0024996_4618_6126 498
25 3300044712 Ga0453684_0084836 Ga0453684_0084836_2032_3555 498
26 3300045051 Ga0451576_0044420 Ga0451576_0044420_2893_4416 498
27 3300042436 Ga0439435_0006868 Ga0439435_0006868_726_2258 499
28 iso_pu_bacteria 2545555834 2545678244 499
29 iso_pu_bacteria 2842333319 2842335008 499
30 iso_pu_bacteria 641522639 641643378 499
31 3300049571 Ga0501034_0039917 Ga0501034_0039917_1379_2905 500
32 3300049591 Ga0501075_0031142 Ga0501075_0031142_378_1904 500
33 iso_pu_bacteria 2513237351 2514592784 500
34 iso_pu_bacteria 2643221550 2643769997 500
35 3300005985 Ga0081539_10003131 Ga0081539_100031314 501
36 iso_pu_bacteria 2854681122 2854685543 501
37 iso_pu_bacteria 2919679072 2919680817 501
38 3300005548 Ga0070665_100221658 Ga0070665_1002216581 502
39 3300028379 Ga0268266_10058003 Ga0268266_100580033 502
40 3300046462 Ga0495651_0041721 Ga0495651_0041721_442_1950 502
41 3300046474 Ga0495605_0061750 Ga0495605_0061750_49_1557 502
42 3300046660 Ga0495625_0078136 Ga0495625_0078136_479_1987 502
43 3300046663 Ga0495635_0002549 Ga0495635_0002549_1995_3503 502
44 3300047319 Ga0495674_0122915 Ga0495674_0122915_496_2004 502
45 3300047673 Ga0495593_0036877 Ga0495593_0036877_154_1662 502
46 3300048088 Ga0495602_0037607 Ga0495602_0037607_1304_2812 502
47 3300048918 Ga0496115_0066988 Ga0496115_0066988_1061_2569 502
48 3300048924 Ga0496121_0046557 Ga0496121_0046557_94_1602 502
49 3300048927 Ga0496124_0175101 Ga0496124_0175101_115_1623 502
50 3300048929 Ga0496126_0047761 Ga0496126_0047761_1623_3131 502
51 3300053086 Ga0500578_0041591 Ga0500578_0041591_213_1721 502
52 iso_pu_bacteria 2509276019 2509377636 502
53 iso_pu_bacteria 2512047086 2512530497 502
54 iso_pu_bacteria 2517487022 2517567702 502
55 iso_pu_bacteria 2558860100 2558865175 502
56 iso_pu_bacteria 2643221591 2643964008 502
57 iso_pu_bacteria 2643221623 2644133523 502
58 iso_pu_bacteria 2791355082 2792584882 502
59 iso_pu_bacteria 2850079185 2850084888 502
60 iso_pu_bacteria 2920760137 2920764905 502
61 iso_pu_bacteria 2937036028 2937039968 502
62 iso_pu_bacteria 2967728569 2967733138 502
63 iso_pu_bacteria 8049293176 8049297785 502
64 3300053151 Ga0500604_0000129 Ga0500604_0000129_8553_10082 503
65 iso_pu_bacteria 2508501050 2508727014 503
66 iso_pu_bacteria 8002285264 8002287521 503
67 3300005336 Ga0070680_100058502 Ga0070680_1000585022 504
68 3300005468 Ga0070707_100013599 Ga0070707_1000135995 504
69 3300005530 Ga0070679_100047110 Ga0070679_1000471102 504
70 iso_pu_bacteria 2599185352 2600196579 504
71 iso_pu_bacteria 2932401849 2932403737 504
72 3300005333 Ga0070677_10010504 Ga0070677_100105042 505
73 3300005334 Ga0068869_100060756 Ga0068869_1000607562 505
74 3300005356 Ga0070674_100002266 Ga0070674_1000022662 505
75 3300005456 Ga0070678_100033056 Ga0070678_1000330562 505
76 3300025903 Ga0207680_10080587 Ga0207680_100805872 505
77 3300025937 Ga0207669_10001006 Ga0207669_100010065 505
78 3300025940 Ga0207691_10021875 Ga0207691_100218752 505
79 3300025942 Ga0207689_10034576 Ga0207689_100345763 505
80 3300026121 Ga0207683_10015529 Ga0207683_100155294 505
81 3300049572 Ga0501036_0105673 Ga0501036_0105673_421_1953 505
82 3300049575 Ga0501039_0012844 Ga0501039_0012844_2371_3903 505
83 3300049579 Ga0501043_0020338 Ga0501043_0020338_3293_4825 505
84 3300049580 Ga0501046_0036534 Ga0501046_0036534_1281_2816 505
85 3300049590 Ga0501074_0005534 Ga0501074_0005534_4602_6134 505
86 3300049592 Ga0501076_0083659 Ga0501076_0083659_911_2446 505
87 3300049742 Ga0501080_0101303 Ga0501080_0101303_380_1912 505
88 iso_pu_bacteria 2643221698 2644540557 505
89 iso_pu_bacteria 2690316117 2692319207 505
90 iso_pu_bacteria 2844163670 2844168630 505
91 iso_pu_bacteria 2847417321 2847422286 505
92 iso_pu_bacteria 2848992105 2848996967 505
93 iso_pu_bacteria 2855872281 2855877936 505
94 iso_pu_bacteria 2920822456 2920828160 505
95 iso_pu_bacteria 643692032 643822106 505
96 3300005367 Ga0070667_100125635 Ga0070667_1001256352 506
97 3300021321 Ga0214542_1020728 Ga0214542_10207283 506
98 3300021327 Ga0214543_1000012 Ga0214543_1000012218 506
99 3300022740 Ga0228710_1000227 Ga0228710_100022734 506
100 3300025986 Ga0207658_10149647 Ga0207658_101496472 506
101 3300048927 Ga0496124_0050861 Ga0496124_0050861_902_2443 506
102 3300048928 Ga0496125_0003961 Ga0496125_0003961_13599_15140 506
103 3300049568 Ga0501031_0004317 Ga0501031_0004317_2216_3742 506
104 3300049569 Ga0501032_0000001 Ga0501032_0000001_279253_280779 506
105 3300049570 Ga0501033_0000198 Ga0501033_0000198_37220_38746 506
106 3300049571 Ga0501034_0000036 Ga0501034_0000036_140330_141856 506
107 3300049572 Ga0501036_0000046 Ga0501036_0000046_23150_24676 506
108 3300049573 Ga0501037_0000017 Ga0501037_0000017_23444_24970 506
109 3300049574 Ga0501038_0000153 Ga0501038_0000153_38855_40381 506
110 3300049575 Ga0501039_0000011 Ga0501039_0000011_142779_144305 506
111 3300049579 Ga0501043_0000016 Ga0501043_0000016_63400_64926 506
112 3300049580 Ga0501046_0029889 Ga0501046_0029889_243_1769 506
113 3300049822 Ga0501035_0000028 Ga0501035_0000028_140456_141982 506
114 3300049823 Ga0501044_0003716 Ga0501044_0003716_2825_4351 506
115 iso_pu_bacteria 2597490356 2599101935 506
116 iso_pu_bacteria 2846952575 2846958081 506
117 iso_pu_bacteria 2511231221 2512036215 507
118 iso_pu_bacteria 2738543024 2739308531 508
119 3300031616 Ga0307508_10001111 Ga0307508_1000111129 509
120 3300033179 Ga0307507_10050320 Ga0307507_100503203 509
121 3300046506 Ga0495583_0018199 Ga0495583_0018199_1856_3385 509
122 iso_pu_bacteria 2511231027 2511392436 510
123 iso_pu_bacteria 2842871566 2842874802 510
124 iso_pu_bacteria 2928521798 2928523047 510
125 iso_pu_bacteria 2954011201 2954013587 510
126 3300009094 Ga0111539_10000042 Ga0111539_10000042116 511
127 3300027907 Ga0207428_10000110 Ga0207428_1000011088 511
128 3300050511 nmdc:mga08y16_47_c1 nmdc:mga08y16_47_c1_49848_51383 511
129 iso_pu_bacteria 2837651117 2837652485 511
130 iso_pu_bacteria 2889914905 2889916469 511
131 iso_pu_bacteria 8054002106 8054008477 511
132 3300009147 Ga0114129_10449867 Ga0114129_104498671 514
133 3300025292 Ga0209676_1007637 Ga0209676_10076374 514
134 3300046459 Ga0495629_0005581 Ga0495629_0005581_1749_3293 514
135 3300046507 Ga0495606_0009756 Ga0495606_0009756_2539_4083 514
136 3300046524 Ga0495648_0002079 Ga0495648_0002079_3050_4594 514
137 3300046675 Ga0495657_0008875 Ga0495657_0008875_2077_3621 514
138 3300046690 Ga0495624_0026696 Ga0495624_0026696_2084_3628 514
139 3300046692 Ga0495671_0029581 Ga0495671_0029581_441_1985 514
140 3300046694 Ga0495649_0007944 Ga0495649_0007944_1892_3436 514
141 3300046809 Ga0495600_0001335 Ga0495600_0001335_7609_9153 514
142 3300048922 Ga0496119_0002273 Ga0496119_0002273_13724_15268 514
143 iso_pu_bacteria 2897803580 2897805878 515
144 3300005844 Ga0068862_100053334 Ga0068862_1000533342 516
145 3300045051 Ga0451576_0066161 Ga0451576_0066161_1855_3405 516
146 3300048913 Ga0496110_0031090 Ga0496110_0031090_877_2433 516
147 3300048914 Ga0496111_0051834 Ga0496111_0051834_1225_2781 516
148 iso_pu_bacteria 2791355263 2793343738 516
149 3300053130 Ga0500642_0001799 Ga0500642_0001799_481_2037 517
150 3300031824 Ga0307413_10007858 Ga0307413_100078582 519
151 3300049592 Ga0501076_0028426 Ga0501076_0028426_1512_3074 519
152 iso_pu_bacteria 2996336353 2996341229 521
153 iso_pu_bacteria 2937843397 2937848132 522
154 3300048929 Ga0496126_0005694 Ga0496126_0005694_4532_6106 523
155 3300006847 Ga0075431_100014099 Ga0075431_1000140994 527
156 3300009147 Ga0114129_10122251 Ga0114129_101222513 527
157 3300049592 Ga0501076_0008313 Ga0501076_0008313_4781_6382 528
158 3300049593 Ga0501077_0039433 Ga0501077_0039433_1117_2718 528
159 3300049743 Ga0501081_0027842 Ga0501081_0027842_1879_3480 528
160 3300049824 Ga0501045_0001466 Ga0501045_0001466_3426_5027 528
161 3300050507 nmdc:mga05p37_102151_c1 nmdc:mga05p37_102151_c1_1122_2723 528
162 3300050510 nmdc:mga06r32_6672_c1 nmdc:mga06r32_6672_c1_5990_7591 528
163 3300054114 Ga0501084_0011912 Ga0501084_0011912_2592_4193 528
164 3300060353 Ga0501082_0000904 Ga0501082_0000904_22165_23766 528
165 iso_pu_bacteria 2643221626 2644149286 530
166 3300013249 Ga0171463_1009 Ga0171463_1009219 533
167 3300015690 Ga0183363_1331 Ga0183363_13314 533
168 iso_pu_bacteria 2941499720 2941505299 536
169 iso_pu_bacteria 2996310559 2996316466 537
170 iso_pu_bacteria 2643221618 2644106777 539
171 iso_pu_bacteria 2643221655 2644309849 539
172 iso_pu_bacteria 2643221659 2644337130 539
173 iso_pu_bacteria 2643221712 2644616300 539
174 iso_pu_bacteria 2643221557 2643806695 542
175 iso_pu_bacteria 2643221668 2644376028 542
176 3300002987 JGI25159J45721_1000063 JGI25159J45721_100006323 546
177 3300003187 JGI25151J46595_10019409 JGI25151J46595_100194092 546
178 3300003354 JGI25160J50197_1000189 JGI25160J50197_100018923 546
179 3300003771 Ga0055526_1003046 Ga0055526_10030466 546
180 3300003781 Ga0055536_1003647 Ga0055536_10036475 546
181 3300003791 Ga0055530_10010955 Ga0055530_100109552 546
182 3300004625 Ga0055543_1000385 Ga0055543_100038523 546
183 3300005262 Ga0065165_1000610 Ga0065165_100061027 546
184 3300025208 Ga0209436_100282 Ga0209436_10028224 546
185 3300025284 Ga0209130_1000147 Ga0209130_100014790 546
186 3300025292 Ga0209676_1000905 Ga0209676_10009056 546
187 3300025294 Ga0209025_1000240 Ga0209025_10002404 546
188 3300025295 Ga0209564_1000819 Ga0209564_100081913 546
189 3300025298 Ga0209050_1003839 Ga0209050_10038393 546
190 3300025302 Ga0207426_1000267 Ga0207426_100026728 546
191 3300025304 Ga0209257_1007536 Ga0209257_10075366 546
192 iso_pu_bacteria 2643221723 2644674357 546

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

59

208

0.96

PF00005

ABC_tran

ABC transporter

310

467

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.9171 44 264
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9022 41 264
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.8959 41 262
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.8907 44 262
8tzj-assembly1.cif.gz_A cryo-em structure of vibrio cholerae ftse/ftsx complex 0.8896 43 257
ID Description Score Start End Superfamily
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9646 41 277 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9528 41 277 3.40.50.300
af_P77257_8_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.948 42 275 3.40.50.300
af_P77509_7_245_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9446 42 275 3.40.50.300
af_P0AAF3_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.937 41 275 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A833G421-F1-model_v4 ATP-binding cassette domain-containing protein 0.9965 41 262 GO:0005524
GO:0016887
AF-A0A833G421-F1-model_v4 ATP-binding cassette domain-containing protein 0.9789 41 262 GO:0005524
GO:0016887
AF-A0A2T0UCU5-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein (CUT2 family) 0.9661 44 277 GO:0005524
GO:0016887
AF-A0A2G6I0U5-F1-model_v4 Heme ABC transporter ATP-binding protein 0.965 39 483 GO:0005524
GO:0016887
AF-A0A355RWD2-F1-model_v4 Heme ABC transporter ATP-binding protein 0.9604 41 266 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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