F294612

General Info

Members Datasets Scaffolds Average Seq Length
191 145 137 272

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0120364|Ga0496104_0120364_1131_1949
Length 261
Sequence VIILAATPIGNLGDASKRLVAALETARVVAAEDTRTTQRLLAALGVANRPRLIALHDHNEKDRAGEIVELAREQDVLVLSDAGMPTVSDPGYGLVAIPGPSAVLTAIAVSGLPTDRFTFEGFVARKPGDRAAALRALAHEPRTMVFFEAPSRAAVTLADMAEAFGSDRRAAVCRELTKLHEEIARATLAELAEWAQRGVRGELVIVVAGAAPREVEFPDAVTQVLELVRSGARLKDAAAEVSAHTGHSSRGLYQAALAVRD

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221546 Microbacterium sp. Root53 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221566 Microbacterium sp. Root166 Isolate Unclassified
5 2643221597 Microbacterium sp. Root180 Isolate Unclassified
6 2643221616 Leifsonia sp. Root227 Isolate Unclassified
7 2643221630 Microbacterium sp. Root322 Isolate Unclassified
8 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
9 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
10 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
11 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
12 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
13 2773857759 Microbacterium sp. 1294 Isolate Unclassified
14 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
15 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
16 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
17 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
18 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
19 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
20 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
21 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
22 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
23 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
24 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
25 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
26 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
27 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
28 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
29 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
30 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
31 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
32 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
33 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
34 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
35 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
36 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
37 2919069694 Microbacterium sp. 1154 Isolate Unclassified
38 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
39 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
40 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
41 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
42 2928153084 Leifsonia sp. 563 Isolate Unclassified
43 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
44 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
45 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
46 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
47 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
48 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
49 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
50 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
51 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
52 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
53 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
54 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
55 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
56 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
57 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
58 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
59 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
60 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
61 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
62 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
63 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
77 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
93 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
98 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
99 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
100 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
142 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
145 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 69.63
Metatranscriptomes 2.09
Isolates 28.27

Biome Distribution

Category Percentage (%)
Aerial Root 1.05
Bulb 0
Endosphere 8.38
Nodule 0
Rhizoplane 7.85
Rhizosphere 48.17
Stem 0
Stem Tuber 0.52
Unclassified 34.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002332 3300002067 Bacteria 6614
2 JGI25154J39366_1004387 3300002738 Bacteria 2547
3 JGI25165J46597_1000004 3300003214 Bacteria 667510
4 Ga0006562J51391_1031829 3300003578 Bacteria 7110
5 Ga0006562J51391_1031830 3300003578 Bacteria 5650
6 Ga0055533_1000001 3300003756 Bacteria 1863437
7 Ga0055525_1000121 3300003759 Bacteria 119321
8 Ga0055541_1000675 3300003841 Bacteria 8859
9 Ga0065714_10075768 3300005288 Bacteria 2869
10 Ga0065714_10123069 3300005288 Bacteria 1323
11 Ga0070658_10000034 3300005327 Bacteria 146880
12 Ga0070658_10024557 3300005327 Bacteria 4834
13 Ga0070659_100100218 3300005366 Bacteria 2331
14 Ga0075364_10016316 3300006051 Bacteria 4618
15 Ga0075364_10044793 3300006051 Bacteria 2878
16 Ga0105244_10064138 3300009036 Bacteria 1844
17 Ga0157371_10005909 3300013102 Bacteria 10226
18 Ga0157370_10057093 3300013104 Bacteria 3714
19 Ga0157369_10003659 3300013105 Bacteria 18245
20 Ga0157369_10028991 3300013105 Bacteria 6121
21 Ga0157369_10065462 3300013105 Bacteria 3911
22 Ga0157369_10705445 3300013105 Bacteria 1039
23 Ga0157372_10051444 3300013307 Bacteria 4585
24 Ga0206356_10329352 3300020070 Bacteria 2160
25 Ga0206353_11715959 3300020082 Bacteria 1707
26 Ga0209566_100065 3300025225 Bacteria 190999
27 Ga0209674_100001 3300025226 Bacteria 4013750
28 Ga0209563_100001 3300025230 Bacteria 4013775
29 Ga0207427_100010 3300025231 Bacteria 648610
30 Ga0209437_100673 3300025233 Bacteria 18629
31 Ga0209646_1000224 3300025246 Bacteria 60259
32 Ga0209677_100001 3300025253 Bacteria 4013787
33 Ga0209677_101480 3300025253 Bacteria 10105
34 Ga0209233_1000001 3300025261 Bacteria 2992747
35 Ga0207655_1013625 3300025728 Bacteria 4654
36 Ga0207705_10000001 3300025909 Bacteria 2061880
37 Ga0207705_10123531 3300025909 Bacteria 1923
38 Ga0207690_10073906 3300025932 Bacteria 2360
39 Ga0207709_10379046 3300025935 Bacteria 1076
40 Ga0207678_10361244 3300026067 Bacteria 1253
41 Ga0307406_10000172 3300031901 Bacteria 38746
42 Ga0307406_10006977 3300031901 Bacteria 6254
43 Ga0307406_10339082 3300031901 Bacteria 1170
44 Ga0307412_10028693 3300031911 Bacteria 3485
45 Ga0307412_10165658 3300031911 Bacteria 1648
46 Ga0307416_100193610 3300032002 Bacteria 1921
47 Ga0307415_100356259 3300032126 Bacteria 1234
48 Ga0395899_0067722 3300037312 Bacteria 2619
49 Ga0395900_0017555 3300037418 Bacteria 7302
50 Ga0395900_0041590 3300037418 Bacteria 4738
51 Ga0395898_0043034 3300037466 Bacteria 4451
52 Ga0395901_0123606 3300038443 Bacteria 2719
53 Ga0451837_0106551 3300041494 Bacteria 1043
54 Ga0451841_1131829 3300041498 Bacteria 1140
55 Ga0466972_0007564 3300044658 Bacteria 5454
56 Ga0466966_0104708 3300044684 Bacteria 1747
57 Ga0466961_0139398 3300044693 Bacteria 1519
58 Ga0466971_0196827 3300044719 Bacteria 951
59 Ga0466970_0018422 3300044765 Bacteria 3613
60 Ga0466970_0101943 3300044765 Bacteria 1563
61 Ga0466957_0036086 3300044842 Bacteria 2970
62 Ga0466960_0079671 3300044901 Bacteria 1648
63 Ga0466960_0218524 3300044901 Bacteria 1048
64 Ga0466959_0010201 3300045049 Bacteria 6707
65 Ga0495627_000392 3300046453 Bacteria 39742
66 Ga0496101_0439065 3300048904 Bacteria 1029
67 Ga0496103_0015906 3300048906 Bacteria 4485
68 Ga0496104_0120364 3300048907 Bacteria 2520
69 Ga0496105_0094535 3300048908 Bacteria 2468
70 Ga0496105_0325310 3300048908 Bacteria 1231
71 Ga0496109_0024804 3300048912 Bacteria 5335
72 Ga0496109_0297295 3300048912 Bacteria 1522
73 Ga0496110_0168248 3300048913 Bacteria 1988
74 Ga0496110_0170773 3300048913 Bacteria 1973
75 Ga0496111_0022570 3300048914 Bacteria 4408
76 Ga0496111_0186080 3300048914 Bacteria 1544
77 Ga0496113_0216615 3300048916 Bacteria 1525
78 Ga0496114_0033393 3300048917 Bacteria 4239
79 Ga0496114_0401192 3300048917 Bacteria 1214
80 Ga0496115_0074656 3300048918 Bacteria 2753
81 Ga0496117_0001847 3300048920 Bacteria 28576
82 Ga0496117_0006055 3300048920 Bacteria 12420
83 Ga0496117_0019072 3300048920 Bacteria 5651
84 Ga0496117_0115053 3300048920 Bacteria 1666
85 Ga0496117_0185811 3300048920 Bacteria 1189
86 Ga0496118_0004571 3300048921 Bacteria 16291
87 Ga0496118_0030411 3300048921 Bacteria 4507
88 Ga0496118_0088877 3300048921 Bacteria 2135
89 Ga0496119_0000831 3300048922 Bacteria 41136
90 Ga0496119_0018981 3300048922 Bacteria 5089
91 Ga0496119_0169379 3300048922 Bacteria 1155
92 Ga0496120_0010856 3300048923 Bacteria 6306
93 Ga0496120_0121387 3300048923 Bacteria 1351
94 Ga0496122_0000036 3300048925 Bacteria 312598
95 Ga0496122_0010497 3300048925 Bacteria 9532
96 Ga0496122_0025363 3300048925 Bacteria 5150
97 Ga0496123_0000011 3300048926 Bacteria 493925
98 Ga0496123_0153978 3300048926 Bacteria 1236
99 Ga0496124_0010259 3300048927 Bacteria 9509
100 Ga0496124_0065515 3300048927 Bacteria 3029
101 Ga0496124_0261164 3300048927 Bacteria 1274
102 Ga0496125_0002827 3300048928 Bacteria 21882
103 Ga0496125_0016360 3300048928 Bacteria 7127
104 Ga0496125_0088512 3300048928 Bacteria 2333
105 Ga0496126_0039175 3300048929 Bacteria 4400
106 Ga0496126_0069376 3300048929 Bacteria 3144
107 Ga0496126_0089183 3300048929 Bacteria 2715
108 Ga0496126_0089655 3300048929 Bacteria 2707
109 Ga0496126_0177614 3300048929 Bacteria 1810
110 Ga0501031_0013919 3300049568 Bacteria 5239
111 Ga0501032_0003503 3300049569 Bacteria 11992
112 Ga0501033_0005333 3300049570 Bacteria 10187
113 Ga0501033_0040056 3300049570 Bacteria 3498
114 Ga0501034_0013357 3300049571 Bacteria 8454
115 Ga0501036_0002820 3300049572 Bacteria 13774
116 Ga0501037_0006706 3300049573 Bacteria 8420
117 Ga0501037_0027917 3300049573 Bacteria 4171
118 Ga0501037_0196094 3300049573 Bacteria 1428
119 Ga0501038_0086434 3300049574 Bacteria 2634
120 Ga0501038_0254751 3300049574 Bacteria 1389
121 Ga0501039_0011263 3300049575 Bacteria 6811
122 Ga0501042_0040068 3300049578 Bacteria 3330
123 Ga0501043_0083772 3300049579 Bacteria 2506
124 Ga0501046_0018189 3300049580 Bacteria 5852
125 Ga0501046_0448612 3300049580 Bacteria 928
126 Ga0501047_0090511 3300049581 Bacteria 2936
127 Ga0501048_0001143 3300049582 Bacteria 19921
128 Ga0501070_0001995 3300049586 Bacteria 17939
129 Ga0501070_0070446 3300049586 Bacteria 2895
130 Ga0501073_0116069 3300049589 Bacteria 1855
131 Ga0501080_0366684 3300049742 Bacteria 1299
132 Ga0501083_0000198 3300049744 Bacteria 38610
133 Ga0501044_0082493 3300049823 Bacteria 3253
134 Ga0501045_0069838 3300049824 Bacteria 2583
135 nmdc:mga00v17_9195_c1 3300050491 Bacteria 5338
136 Ga0500635_0000364 3300053080 Bacteria 14420
137 Ga0466962_0074577 3300061719 Bacteria 1621

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005327 Ga0070658_10024557 Ga0070658_100245575 240
2 3300025909 Ga0207705_10123531 Ga0207705_101235313 240
3 3300025935 Ga0207709_10379046 Ga0207709_103790462 249
4 3300048907 Ga0496104_0120364 Ga0496104_0120364_1131_1949 261
5 3300048908 Ga0496105_0094535 Ga0496105_0094535_764_1582 261
6 3300048912 Ga0496109_0024804 Ga0496109_0024804_3623_4441 261
7 3300048913 Ga0496110_0170773 Ga0496110_0170773_70_888 261
8 3300048914 Ga0496111_0186080 Ga0496111_0186080_455_1273 261
9 3300048916 Ga0496113_0216615 Ga0496113_0216615_504_1322 261
10 3300048917 Ga0496114_0401192 Ga0496114_0401192_118_936 261
11 3300048920 Ga0496117_0115053 Ga0496117_0115053_817_1644 261
12 iso_pu_bacteria 2643221616 2644096792 267
13 iso_pu_bacteria 2751185788 2753303124 267
14 iso_pu_bacteria 2884763398 2884765996 267
15 iso_pu_bacteria 2904430863 2904431847 267
16 iso_pu_bacteria 2904501621 2904504361 267
17 iso_pu_bacteria 2908674828 2908676583 267
18 iso_pu_bacteria 2909074476 2909077293 267
19 iso_pu_bacteria 2919039151 2919041691 267
20 iso_pu_bacteria 2919042368 2919042450 267
21 iso_pu_bacteria 2928104781 2928106125 267
22 iso_pu_bacteria 2928500415 2928502934 267
23 iso_pu_bacteria 2946033335 2946036866 267
24 iso_pu_bacteria 2643221542 2643732245 268
25 iso_pu_bacteria 2643221546 2643752980 268
26 iso_pu_bacteria 2643221553 2643786630 268
27 iso_pu_bacteria 2643221566 2643849162 268
28 iso_pu_bacteria 2643221597 2643995369 268
29 iso_pu_bacteria 2643221630 2644171063 268
30 iso_pu_bacteria 2643221632 2644182698 268
31 iso_pu_bacteria 2643221724 2644681311 268
32 iso_pu_bacteria 2728369380 2730230253 268
33 iso_pu_bacteria 2747842429 2747955213 268
34 iso_pu_bacteria 2773857759 2774383985 268
35 iso_pu_bacteria 2808606368 2808886117 268
36 iso_pu_bacteria 2808606447 2809227877 268
37 iso_pu_bacteria 2811994872 2812323831 268
38 iso_pu_bacteria 2821268502 2821270523 268
39 iso_pu_bacteria 2844841374 2844843018 268
40 iso_pu_bacteria 2852632344 2852634635 268
41 iso_pu_bacteria 2852646457 2852649767 268
42 iso_pu_bacteria 2852663356 2852664408 268
43 iso_pu_bacteria 2857720070 2857722972 268
44 iso_pu_bacteria 2857723135 2857724921 268
45 iso_pu_bacteria 2857729791 2857730431 268
46 iso_pu_bacteria 2870628048 2870630867 268
47 iso_pu_bacteria 2904509784 2904511485 268
48 iso_pu_bacteria 2908678064 2908679799 268
49 iso_pu_bacteria 2919055335 2919058988 268
50 iso_pu_bacteria 2919069694 2919073049 268
51 iso_pu_bacteria 2919523602 2919525111 268
52 iso_pu_bacteria 2928090899 2928091646 268
53 iso_pu_bacteria 2928121344 2928123673 268
54 iso_pu_bacteria 2928153084 2928156686 268
55 iso_pu_bacteria 2945968032 2945968461 268
56 iso_pu_bacteria 2946080515 2946084468 268
57 iso_pu_bacteria 2977228692 2977231922 268
58 iso_pu_bacteria 2977236895 2977237280 268
59 iso_pu_bacteria 2977251589 2977254488 268
60 iso_pu_bacteria 2984542743 2984544933 268
61 iso_pu_bacteria 2984580707 2984581602 268
62 iso_pu_bacteria 8004182704 8004185787 268
63 iso_pu_bacteria 8045830549 8045830689 268
64 iso_pu_bacteria 2977264416 2977267234 269
65 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004143 271
66 3300009036 Ga0105244_10064138 Ga0105244_100641381 271
67 3300013105 Ga0157369_10003659 Ga0157369_100036595 271
68 3300013105 Ga0157369_10028991 Ga0157369_100289917 271
69 3300013105 Ga0157369_10705445 Ga0157369_107054452 271
70 3300013307 Ga0157372_10051444 Ga0157372_100514442 271
71 3300025231 Ga0207427_100010 Ga0207427_100010438 271
72 3300025233 Ga0209437_100673 Ga0209437_1006735 271
73 3300025261 Ga0209233_1000001 Ga0209233_10000011511 271
74 3300025728 Ga0207655_1013625 Ga0207655_10136252 271
75 3300037418 Ga0395900_0017555 Ga0395900_0017555_6455_7270 271
76 3300037466 Ga0395898_0043034 Ga0395898_0043034_2242_3069 271
77 3300038443 Ga0395901_0123606 Ga0395901_0123606_1843_2658 271
78 3300044658 Ga0466972_0007564 Ga0466972_0007564_1308_2123 271
79 3300044684 Ga0466966_0104708 Ga0466966_0104708_312_1127 271
80 3300044693 Ga0466961_0139398 Ga0466961_0139398_212_1027 271
81 3300044719 Ga0466971_0196827 Ga0466971_0196827_73_888 271
82 3300044765 Ga0466970_0101943 Ga0466970_0101943_401_1216 271
83 3300044842 Ga0466957_0036086 Ga0466957_0036086_51_866 271
84 3300045049 Ga0466959_0010201 Ga0466959_0010201_1874_2689 271
85 3300048926 Ga0496123_0153978 Ga0496123_0153978_387_1208 271
86 3300049570 Ga0501033_0040056 Ga0501033_0040056_46_861 271
87 3300049573 Ga0501037_0196094 Ga0501037_0196094_547_1362 271
88 3300049580 Ga0501046_0448612 Ga0501046_0448612_100_915 271
89 3300049823 Ga0501044_0082493 Ga0501044_0082493_637_1452 271
90 3300002067 JGI24735J21928_10002332 JGI24735J21928_100023322 272
91 3300002738 JGI25154J39366_1004387 JGI25154J39366_10043872 272
92 3300003578 Ga0006562J51391_1031829 Ga0006562J51391_10318292 272
93 3300003578 Ga0006562J51391_1031830 Ga0006562J51391_10318304 272
94 3300003756 Ga0055533_1000001 Ga0055533_10000011360 272
95 3300003759 Ga0055525_1000121 Ga0055525_100012137 272
96 3300003841 Ga0055541_1000675 Ga0055541_10006754 272
97 3300005288 Ga0065714_10075768 Ga0065714_100757681 272
98 3300005288 Ga0065714_10123069 Ga0065714_101230692 272
99 3300005327 Ga0070658_10000034 Ga0070658_1000003470 272
100 3300005366 Ga0070659_100100218 Ga0070659_1001002183 272
101 3300006051 Ga0075364_10016316 Ga0075364_100163162 272
102 3300006051 Ga0075364_10044793 Ga0075364_100447932 272
103 3300013102 Ga0157371_10005909 Ga0157371_100059092 272
104 3300013104 Ga0157370_10057093 Ga0157370_100570931 272
105 3300013105 Ga0157369_10065462 Ga0157369_100654621 272
106 3300020070 Ga0206356_10329352 Ga0206356_103293522 272
107 3300020082 Ga0206353_11715959 Ga0206353_117159593 272
108 3300025225 Ga0209566_100065 Ga0209566_10006556 272
109 3300025226 Ga0209674_100001 Ga0209674_1000011360 272
110 3300025230 Ga0209563_100001 Ga0209563_1000011360 272
111 3300025246 Ga0209646_1000224 Ga0209646_100022434 272
112 3300025253 Ga0209677_100001 Ga0209677_1000011360 272
113 3300025253 Ga0209677_101480 Ga0209677_1014804 272
114 3300025909 Ga0207705_10000001 Ga0207705_10000001255 272
115 3300025932 Ga0207690_10073906 Ga0207690_100739061 272
116 3300026067 Ga0207678_10361244 Ga0207678_103612442 272
117 3300031901 Ga0307406_10000172 Ga0307406_1000017214 272
118 3300031901 Ga0307406_10006977 Ga0307406_100069774 272
119 3300031901 Ga0307406_10339082 Ga0307406_103390822 272
120 3300031911 Ga0307412_10028693 Ga0307412_100286934 272
121 3300031911 Ga0307412_10165658 Ga0307412_101656582 272
122 3300032002 Ga0307416_100193610 Ga0307416_1001936102 272
123 3300032126 Ga0307415_100356259 Ga0307415_1003562592 272
124 3300037312 Ga0395899_0067722 Ga0395899_0067722_248_1066 272
125 3300037418 Ga0395900_0041590 Ga0395900_0041590_2154_2972 272
126 3300041494 Ga0451837_0106551 Ga0451837_0106551_144_965 272
127 3300041498 Ga0451841_1131829 Ga0451841_1131829_232_1053 272
128 3300044765 Ga0466970_0018422 Ga0466970_0018422_27_845 272
129 3300044901 Ga0466960_0079671 Ga0466960_0079671_700_1518 272
130 3300044901 Ga0466960_0218524 Ga0466960_0218524_38_871 272
131 3300046453 Ga0495627_000392 Ga0495627_000392_3177_4004 272
132 3300048904 Ga0496101_0439065 Ga0496101_0439065_186_1004 272
133 3300048906 Ga0496103_0015906 Ga0496103_0015906_1550_2368 272
134 3300048908 Ga0496105_0325310 Ga0496105_0325310_261_1079 272
135 3300048912 Ga0496109_0297295 Ga0496109_0297295_345_1163 272
136 3300048913 Ga0496110_0168248 Ga0496110_0168248_174_992 272
137 3300048914 Ga0496111_0022570 Ga0496111_0022570_1138_1956 272
138 3300048917 Ga0496114_0033393 Ga0496114_0033393_636_1454 272
139 3300048918 Ga0496115_0074656 Ga0496115_0074656_1745_2563 272
140 3300048920 Ga0496117_0001847 Ga0496117_0001847_20124_20945 272
141 3300048920 Ga0496117_0006055 Ga0496117_0006055_7341_8159 272
142 3300048920 Ga0496117_0019072 Ga0496117_0019072_3431_4279 272
143 3300048920 Ga0496117_0185811 Ga0496117_0185811_162_980 272
144 3300048921 Ga0496118_0004571 Ga0496118_0004571_10917_11738 272
145 3300048921 Ga0496118_0030411 Ga0496118_0030411_601_1449 272
146 3300048921 Ga0496118_0088877 Ga0496118_0088877_88_909 272
147 3300048922 Ga0496119_0000831 Ga0496119_0000831_27266_28084 272
148 3300048922 Ga0496119_0018981 Ga0496119_0018981_1461_2309 272
149 3300048922 Ga0496119_0169379 Ga0496119_0169379_244_1062 272
150 3300048923 Ga0496120_0010856 Ga0496120_0010856_2153_3001 272
151 3300048923 Ga0496120_0121387 Ga0496120_0121387_372_1190 272
152 3300048925 Ga0496122_0000036 Ga0496122_0000036_297262_298110 272
153 3300048925 Ga0496122_0010497 Ga0496122_0010497_1471_2292 272
154 3300048925 Ga0496122_0025363 Ga0496122_0025363_2932_3750 272
155 3300048926 Ga0496123_0000011 Ga0496123_0000011_297338_298186 272
156 3300048927 Ga0496124_0010259 Ga0496124_0010259_1706_2554 272
157 3300048927 Ga0496124_0065515 Ga0496124_0065515_489_1307 272
158 3300048927 Ga0496124_0261164 Ga0496124_0261164_418_1239 272
159 3300048928 Ga0496125_0002827 Ga0496125_0002827_11338_12159 272
160 3300048928 Ga0496125_0016360 Ga0496125_0016360_3977_4798 272
161 3300048928 Ga0496125_0088512 Ga0496125_0088512_613_1461 272
162 3300048929 Ga0496126_0039175 Ga0496126_0039175_2950_3798 272
163 3300048929 Ga0496126_0069376 Ga0496126_0069376_545_1366 272
164 3300048929 Ga0496126_0089183 Ga0496126_0089183_869_1690 272
165 3300048929 Ga0496126_0089655 Ga0496126_0089655_1486_2310 272
166 3300048929 Ga0496126_0177614 Ga0496126_0177614_571_1395 272
167 3300049568 Ga0501031_0013919 Ga0501031_0013919_1869_2705 272
168 3300049569 Ga0501032_0003503 Ga0501032_0003503_10925_11761 272
169 3300049570 Ga0501033_0005333 Ga0501033_0005333_8726_9562 272
170 3300049571 Ga0501034_0013357 Ga0501034_0013357_6023_6859 272
171 3300049572 Ga0501036_0002820 Ga0501036_0002820_2988_3824 272
172 3300049573 Ga0501037_0006706 Ga0501037_0006706_6378_7214 272
173 3300049573 Ga0501037_0027917 Ga0501037_0027917_2459_3277 272
174 3300049574 Ga0501038_0086434 Ga0501038_0086434_75_911 272
175 3300049574 Ga0501038_0254751 Ga0501038_0254751_279_1100 272
176 3300049575 Ga0501039_0011263 Ga0501039_0011263_1000_1836 272
177 3300049578 Ga0501042_0040068 Ga0501042_0040068_343_1161 272
178 3300049579 Ga0501043_0083772 Ga0501043_0083772_75_911 272
179 3300049580 Ga0501046_0018189 Ga0501046_0018189_74_910 272
180 3300049581 Ga0501047_0090511 Ga0501047_0090511_809_1645 272
181 3300049582 Ga0501048_0001143 Ga0501048_0001143_808_1644 272
182 3300049586 Ga0501070_0001995 Ga0501070_0001995_11569_12387 272
183 3300049586 Ga0501070_0070446 Ga0501070_0070446_1929_2765 272
184 3300049589 Ga0501073_0116069 Ga0501073_0116069_721_1557 272
185 3300049742 Ga0501080_0366684 Ga0501080_0366684_300_1136 272
186 3300049744 Ga0501083_0000198 Ga0501083_0000198_27344_28162 272
187 3300049824 Ga0501045_0069838 Ga0501045_0069838_238_1074 272
188 3300050491 nmdc:mga00v17_9195_c1 nmdc:mga00v17_9195_c1_3940_4761 272
189 3300053080 Ga0500635_0000364 Ga0500635_0000364_13446_14279 272
190 3300061719 Ga0466962_0074577 Ga0466962_0074577_353_1171 272
191 iso_pu_bacteria 2808606306 2808630684 272

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23016

RsmI_C

RsmI C-terminal HTH domain

215

260

0.94

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

1

192

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.8941 110 222
3ffy-assembly1.cif.gz_A-2 putative tetrapyrrole (corrin/porphyrin) methyltransferase from bacteroides fragilis. 0.8898 110 221
3ffy-assembly1.cif.gz_A-2 putative tetrapyrrole (corrin/porphyrin) methyltransferase from bacteroides fragilis. 0.8823 110 221
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.8793 110 222
4fcy-assembly1.cif.gz_B crystal structure of the bacteriophage mu transpososome 0.8711 228 269
ID Description Score Start End Superfamily
af_P9WGW7_115_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9811 110 222 3.30.950.10
3kwpA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.968 110 223 3.30.950.10
af_Q338C6_169_282_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9638 111 222 3.30.950.10
5hw4C02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9603 110 222 3.30.950.10
af_P9WGW7_115_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9479 110 222 3.30.950.10
ID Description Score Start End GO Terms
AF-A0A359FWA4-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.982 143 222 GO:0005737
GO:0006364
GO:0008168
GO:0032259
AF-K2DCQ5-F1-model_v4 Tetrapyrrole methylase family protein 0.9556 120 220 GO:0008168
GO:0032259
AF-A0A1B0C470-F1-model_v4 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 0.9497 18 165 GO:0000287
GO:0003864
GO:0005737
GO:0008168
GO:0008483
GO:0015940
GO:0030170
AF-A0A2M7E8N8-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9476 122 222 GO:0005737
GO:0006364
GO:0008168
GO:0032259
AF-A0A3B9PRS9-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.946 110 221 GO:0008168
GO:0032259

Feature Viewer

pLDDT pTM Quality
88.9 0.77 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map