F294434

General Info

Members Datasets Scaffolds Average Seq Length
191 142 382 258

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0015815|Ga0466969_0015815_2307_3188
Length 293
Sequence MLLAVDIGNTNIVFGLFDGAQLLTHFRMETRKARTEDEYAALLASLLQLHGLPFRPTALRGEGSEAAAASADPLHPPVAPVRVSPDERGISAGILATVVPPVLAAFQRLFQRYLHIDPVIVGPGTRTGMPILYDNPREVGADRIINAVAAYERYRSGCLVVDFGTATTFDVVTPKGEYLGGAIAPGIGISADALFHAAAKLPRVELVRPRSVIGKNTVTSMQSGLVYGYVGLVDGIVERMRAEVDFPLRVVATGGLAALLARDSRTIEECDEMLTLTGLRIIYEREQRRGPRQ

Samples

Sample ID Description Type Environment
1 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
90 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
91 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
92 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
107 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
108 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 2506783011 Frankia datiscae Dg1 Isolate Nodule
141 2773857933 Frankia sp. BMG5.30 Isolate Nodule
142 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.43
Metatranscriptomes 0
Isolates 1.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 1.05
Rhizoplane 4.19
Rhizosphere 92.15
Stem 0
Stem Tuber 0
Unclassified 6.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466969_0015815 3300044656 Bacteria 3955
2 JGI25406J46586_10002461 3300003203 Bacteria 8752
3 Ga0070658_10220447 3300005327 Bacteria 1604
4 Ga0070676_10002828 3300005328 Bacteria 8972
5 Ga0070670_100003890 3300005331 Bacteria 12451
6 Ga0070666_10001077 3300005335 Bacteria 16659
7 Ga0070680_100702753 3300005336 Bacteria 870
8 Ga0070660_100015009 3300005339 Bacteria 5587
9 Ga0070660_100175222 3300005339 Bacteria 1734
10 Ga0070689_100141755 3300005340 Bacteria 1933
11 Ga0070661_100035995 3300005344 Bacteria 3598
12 Ga0070668_100025074 3300005347 Bacteria 4520
13 Ga0070675_100006196 3300005354 Bacteria 9173
14 Ga0070675_100163311 3300005354 Bacteria 1917
15 Ga0070671_100039238 3300005355 Bacteria 3931
16 Ga0070674_100000913 3300005356 Bacteria 15401
17 Ga0070674_100383557 3300005356 Bacteria 1144
18 Ga0070673_100001618 3300005364 Bacteria 13323
19 Ga0070667_100153078 3300005367 Unclassified 2027
20 Ga0070714_100060709 3300005435 Bacteria 3245
21 Ga0070714_100427620 3300005435 Bacteria 1255
22 Ga0070708_100436023 3300005445 Bacteria 1236
23 Ga0070678_100000289 3300005456 Bacteria 23251
24 Ga0068867_100116852 3300005459 Unclassified 2056
25 Ga0070706_100000544 3300005467 Bacteria 43755
26 Ga0070707_100012559 3300005468 Bacteria 7910
27 Ga0070707_100241289 3300005468 Bacteria 1759
28 Ga0070679_100304173 3300005530 Bacteria 1545
29 Ga0070697_100309504 3300005536 Bacteria 1359
30 Ga0070672_100000395 3300005543 Bacteria 25232
31 Ga0070696_100145802 3300005546 Bacteria 1734
32 Ga0070665_100107195 3300005548 Bacteria 2796
33 Ga0068855_100011631 3300005563 Bacteria 10634
34 Ga0068855_100336242 3300005563 Bacteria 1666
35 Ga0070664_100059263 3300005564 Bacteria 3257
36 Ga0068856_100254749 3300005614 Bacteria 1770
37 Ga0081455_10001824 3300005937 Bacteria 25636
38 Ga0081539_10000027 3300005985 Bacteria 328691
39 Ga0081539_10050560 3300005985 Bacteria 2351
40 Ga0075363_100297509 3300006048 Bacteria 936
41 Ga0097621_100016083 3300006237 Bacteria 5647
42 Ga0068871_100024165 3300006358 Bacteria 4709
43 Ga0075431_100094779 3300006847 Bacteria 3081
44 Ga0075431_100191212 3300006847 Bacteria 2097
45 Ga0075434_100046439 3300006871 Bacteria 4310
46 Ga0075429_100441730 3300006880 Bacteria 1140
47 Ga0068865_100035919 3300006881 Bacteria 3337
48 Ga0105240_10014697 3300009093 Bacteria 10678
49 Ga0111539_10000068 3300009094 Bacteria 104185
50 Ga0105245_10002582 3300009098 Bacteria 16309
51 Ga0114129_10059162 3300009147 Bacteria 5358
52 Ga0114129_10079820 3300009147 Bacteria 4549
53 Ga0157371_10035929 3300013102 Bacteria 3549
54 Ga0157370_10002927 3300013104 Bacteria 20330
55 Ga0157369_10002953 3300013105 Bacteria 20328
56 Ga0157374_10016219 3300013296 Bacteria 6546
57 Ga0157378_10002228 3300013297 Bacteria 17202
58 Ga0157375_10006809 3300013308 Bacteria 9951
59 Ga0157376_10004583 3300014969 Bacteria 9624
60 Ga0163161_10087105 3300017792 Bacteria 2306
61 Ga0207680_10003268 3300025903 Bacteria 7633
62 Ga0207647_10069710 3300025904 Bacteria 2125
63 Ga0207645_10011308 3300025907 Bacteria 6099
64 Ga0207684_10000941 3300025910 Bacteria 32851
65 Ga0207684_10301880 3300025910 Bacteria 1380
66 Ga0207695_10032935 3300025913 Bacteria 5664
67 Ga0207695_10199066 3300025913 Bacteria 1918
68 Ga0207657_10149096 3300025919 Bacteria 1906
69 Ga0207657_10158199 3300025919 Unclassified 1841
70 Ga0207652_10183812 3300025921 Bacteria 1879
71 Ga0207646_10148546 3300025922 Unclassified 2113
72 Ga0207646_10153634 3300025922 Bacteria 2076
73 Ga0207650_10047769 3300025925 Bacteria 3155
74 Ga0207659_10008888 3300025926 Bacteria 6262
75 Ga0207687_10004604 3300025927 Bacteria 9182
76 Ga0207664_10498789 3300025929 Bacteria 1090
77 Ga0207706_10005823 3300025933 Bacteria 11465
78 Ga0207669_10000721 3300025937 Bacteria 14310
79 Ga0207669_10093145 3300025937 Bacteria 1968
80 Ga0207704_10044277 3300025938 Bacteria 2636
81 Ga0207691_10001884 3300025940 Bacteria 20501
82 Ga0207679_10234502 3300025945 Unclassified 1551
83 Ga0207667_10074902 3300025949 Bacteria 3515
84 Ga0207667_10290069 3300025949 Bacteria 1672
85 Ga0207651_10000724 3300025960 Bacteria 14106
86 Ga0207668_10180152 3300025972 Bacteria 1666
87 Ga0207658_10240134 3300025986 Unclassified 1534
88 Ga0207648_10081526 3300026089 Bacteria 2822
89 Ga0207683_10000352 3300026121 Bacteria 42113
90 Ga0207428_10026879 3300027907 Bacteria 4795
91 Ga0268266_10079165 3300028379 Bacteria 2861
92 Ga0265338_10145289 3300028800 Bacteria 1851
93 Ga0265338_10427695 3300028800 Bacteria 940
94 Ga0265325_10022476 3300031241 Bacteria 3454
95 Ga0265325_10061814 3300031241 Bacteria 1899
96 Ga0265340_10009475 3300031247 Bacteria 5224
97 Ga0265339_10039931 3300031249 Bacteria 2610
98 Ga0307408_100057604 3300031548 Bacteria 2822
99 Ga0265314_10098412 3300031711 Bacteria 1887
100 Ga0316576_10018094 3300031727 Bacteria 4803
101 Ga0316576_10033264 3300031727 Bacteria 3669
102 Ga0316576_10080178 3300031727 Bacteria 2421
103 Ga0316576_10087188 3300031727 Bacteria 2322
104 Ga0316576_10131832 3300031727 Bacteria 1880
105 Ga0316578_10016946 3300031728 Bacteria 3955
106 Ga0316578_10127908 3300031728 Bacteria 1528
107 Ga0307413_10043383 3300031824 Bacteria 2650
108 Ga0307410_10055444 3300031852 Bacteria 2691
109 Ga0307416_100038854 3300032002 Bacteria 3677
110 Ga0307416_100200999 3300032002 Unclassified 1891
111 Ga0307415_100146422 3300032126 Bacteria 1811
112 Ga0307415_100529110 3300032126 Bacteria 1036
113 Ga0307415_100550680 3300032126 Bacteria 1018
114 Ga0316580_10068327 3300032139 Bacteria 1089
115 Ga0373950_0000001 3300034818 Bacteria 1001987
116 Ga0373950_0000034 3300034818 Bacteria 143669
117 Ga0373926_0130236 3300035083 Bacteria 952
118 Ga0373923_0145513 3300035111 Bacteria 1073
119 Ga0373955_0136570 3300035172 Bacteria 1435
120 Ga0316574_0072520 3300035398 Bacteria 2176
121 Ga0316574_0102788 3300035398 Bacteria 1829
122 Ga0373924_0090630 3300035410 Bacteria 1308
123 Ga0373935_0034667 3300035692 Bacteria 3147
124 Ga0373947_0065907 3300035725 Bacteria 2209
125 Ga0316584_0026765 3300036712 Bacteria 4241
126 Ga0316584_0045555 3300036712 Bacteria 3274
127 Ga0316584_0083012 3300036712 Bacteria 2400
128 Ga0373925_0265745 3300037068 Unclassified 1379
129 Ga0373925_0500504 3300037068 Bacteria 997
130 Ga0395899_0071498 3300037312 Bacteria 2539
131 Ga0395900_0045741 3300037418 Bacteria 4508
132 Ga0395898_0164511 3300037466 Bacteria 2122
133 Ga0395898_0166859 3300037466 Bacteria 2105
134 Ga0395905_0596085 3300037471 Bacteria 1007
135 Ga0436364_0001519 3300037853 Bacteria 1413
136 Ga0395901_0058803 3300038443 Bacteria 3998
137 Ga0395901_0167252 3300038443 Bacteria 2308
138 Ga0395901_0672893 3300038443 Bacteria 1036
139 Ga0400484_34870 3300038725 Bacteria 1949
140 Ga0400483_103061 3300039062 Bacteria 1923
141 Ga0400489_36399 3300039093 Bacteria 8992
142 Ga0451577_0103523 3300042876 Bacteria 2544
143 Ga0451577_0343578 3300042876 Bacteria 1354
144 Ga0453683_0020641 3300044673 Unclassified 4210
145 Ga0466966_0146430 3300044684 Bacteria 1442
146 Ga0466961_0067271 3300044693 Bacteria 2276
147 Ga0466964_0134337 3300044706 Bacteria 1130
148 Ga0495588_0179714 3300046674 Bacteria 1118
149 Ga0496100_0061347 3300048903 Bacteria 2478
150 Ga0496108_0052470 3300048911 Bacteria 3417
151 Ga0496108_0059063 3300048911 Bacteria 3225
152 Ga0496108_0287317 3300048911 Bacteria 1432
153 Ga0496110_0184892 3300048913 Bacteria 1892
154 Ga0496114_0003233 3300048917 Bacteria 12494
155 Ga0496114_0280393 3300048917 Bacteria 1469
156 Ga0496115_0113068 3300048918 Bacteria 2231
157 Ga0501299_010534 3300049522 Unclassified 1545
158 Ga0501036_0068622 3300049572 Bacteria 3000
159 Ga0501041_0051524 3300049577 Bacteria 2509
160 Ga0501067_0000175 3300049583 Bacteria 36013
161 Ga0501068_0337103 3300049584 Bacteria 968
162 Ga0501069_0020717 3300049585 Bacteria 3565
163 Ga0501069_0055119 3300049585 Bacteria 2214
164 Ga0501070_0000575 3300049586 Bacteria 33460
165 Ga0501070_0030127 3300049586 Bacteria 4547
166 Ga0501070_0121785 3300049586 Bacteria 2156
167 Ga0501073_0002312 3300049589 Bacteria 14265
168 Ga0501073_0007766 3300049589 Bacteria 7965
169 Ga0501073_0017282 3300049589 Bacteria 5225
170 Ga0501074_0036279 3300049590 Bacteria 3572
171 Ga0501074_0040246 3300049590 Bacteria 3386
172 Ga0501074_0134099 3300049590 Bacteria 1771
173 Ga0501074_0779139 3300049590 Bacteria 674
174 Ga0501075_0056205 3300049591 Bacteria 2963
175 Ga0501080_0066398 3300049742 Bacteria 3355
176 Ga0501080_0223122 3300049742 Bacteria 1724
177 Ga0501081_0010612 3300049743 Bacteria 6015
178 Ga0501081_0051999 3300049743 Bacteria 2826
179 Ga0501083_0000882 3300049744 Bacteria 19848
180 Ga0501045_0046661 3300049824 Bacteria 3155
181 nmdc:mga05p37_641783_c1 3300050507 Bacteria 1191
182 nmdc:mga09592_199257_c1 3300050508 Unclassified 1734
183 nmdc:mga09592_72818_c1 3300050508 Bacteria 2918
184 nmdc:mga06r32_166065_c1 3300050510 Bacteria 2190
185 nmdc:mga06r32_238751_c1 3300050510 Bacteria 1805
186 nmdc:mga08y16_99_c1 3300050511 Bacteria 72899
187 nmdc:mga0a205_876735_c1 3300050515 Unclassified 744
188 Ga0501082_0000739 3300060353 Bacteria 28788
189 2506868966 2506783011 Bacteria 5323186
190 2774901647 2773857933 Bacteria 5818019
191 2795793810 2795385472 Bacteria 6627535
192 Ga0466969_0015815
193 JGI25406J46586_10002461
194 Ga0070658_10220447
195 Ga0070676_10002828
196 Ga0070670_100003890
197 Ga0070666_10001077
198 Ga0070680_100702753
199 Ga0070660_100015009
200 Ga0070660_100175222
201 Ga0070689_100141755
202 Ga0070661_100035995
203 Ga0070668_100025074
204 Ga0070675_100006196
205 Ga0070675_100163311
206 Ga0070671_100039238
207 Ga0070674_100000913
208 Ga0070674_100383557
209 Ga0070673_100001618
210 Ga0070667_100153078
211 Ga0070714_100060709
212 Ga0070714_100427620
213 Ga0070708_100436023
214 Ga0070678_100000289
215 Ga0068867_100116852
216 Ga0070706_100000544
217 Ga0070707_100012559
218 Ga0070707_100241289
219 Ga0070679_100304173
220 Ga0070697_100309504
221 Ga0070672_100000395
222 Ga0070696_100145802
223 Ga0070665_100107195
224 Ga0068855_100011631
225 Ga0068855_100336242
226 Ga0070664_100059263
227 Ga0068856_100254749
228 Ga0081455_10001824
229 Ga0081539_10000027
230 Ga0081539_10050560
231 Ga0075363_100297509
232 Ga0097621_100016083
233 Ga0068871_100024165
234 Ga0075431_100094779
235 Ga0075431_100191212
236 Ga0075434_100046439
237 Ga0075429_100441730
238 Ga0068865_100035919
239 Ga0105240_10014697
240 Ga0111539_10000068
241 Ga0105245_10002582
242 Ga0114129_10059162
243 Ga0114129_10079820
244 Ga0157371_10035929
245 Ga0157370_10002927
246 Ga0157369_10002953
247 Ga0157374_10016219
248 Ga0157378_10002228
249 Ga0157375_10006809
250 Ga0157376_10004583
251 Ga0163161_10087105
252 Ga0207680_10003268
253 Ga0207647_10069710
254 Ga0207645_10011308
255 Ga0207684_10000941
256 Ga0207684_10301880
257 Ga0207695_10032935
258 Ga0207695_10199066
259 Ga0207657_10149096
260 Ga0207657_10158199
261 Ga0207652_10183812
262 Ga0207646_10148546
263 Ga0207646_10153634
264 Ga0207650_10047769
265 Ga0207659_10008888
266 Ga0207687_10004604
267 Ga0207664_10498789
268 Ga0207706_10005823
269 Ga0207669_10000721
270 Ga0207669_10093145
271 Ga0207704_10044277
272 Ga0207691_10001884
273 Ga0207679_10234502
274 Ga0207667_10074902
275 Ga0207667_10290069
276 Ga0207651_10000724
277 Ga0207668_10180152
278 Ga0207658_10240134
279 Ga0207648_10081526
280 Ga0207683_10000352
281 Ga0207428_10026879
282 Ga0268266_10079165
283 Ga0265338_10145289
284 Ga0265338_10427695
285 Ga0265325_10022476
286 Ga0265325_10061814
287 Ga0265340_10009475
288 Ga0265339_10039931
289 Ga0307408_100057604
290 Ga0265314_10098412
291 Ga0316576_10018094
292 Ga0316576_10033264
293 Ga0316576_10080178
294 Ga0316576_10087188
295 Ga0316576_10131832
296 Ga0316578_10016946
297 Ga0316578_10127908
298 Ga0307413_10043383
299 Ga0307410_10055444
300 Ga0307416_100038854
301 Ga0307416_100200999
302 Ga0307415_100146422
303 Ga0307415_100529110
304 Ga0307415_100550680
305 Ga0316580_10068327
306 Ga0373950_0000001
307 Ga0373950_0000034
308 Ga0373926_0130236
309 Ga0373923_0145513
310 Ga0373955_0136570
311 Ga0316574_0072520
312 Ga0316574_0102788
313 Ga0373924_0090630
314 Ga0373935_0034667
315 Ga0373947_0065907
316 Ga0316584_0026765
317 Ga0316584_0045555
318 Ga0316584_0083012
319 Ga0373925_0265745
320 Ga0373925_0500504
321 Ga0395899_0071498
322 Ga0395900_0045741
323 Ga0395898_0164511
324 Ga0395898_0166859
325 Ga0395905_0596085
326 Ga0436364_0001519
327 Ga0395901_0058803
328 Ga0395901_0167252
329 Ga0395901_0672893
330 Ga0400484_34870
331 Ga0400483_103061
332 Ga0400489_36399
333 Ga0451577_0103523
334 Ga0451577_0343578
335 Ga0453683_0020641
336 Ga0466966_0146430
337 Ga0466961_0067271
338 Ga0466964_0134337
339 Ga0495588_0179714
340 Ga0496100_0061347
341 Ga0496108_0052470
342 Ga0496108_0059063
343 Ga0496108_0287317
344 Ga0496110_0184892
345 Ga0496114_0003233
346 Ga0496114_0280393
347 Ga0496115_0113068
348 Ga0501299_010534
349 Ga0501036_0068622
350 Ga0501041_0051524
351 Ga0501067_0000175
352 Ga0501068_0337103
353 Ga0501069_0020717
354 Ga0501069_0055119
355 Ga0501070_0000575
356 Ga0501070_0030127
357 Ga0501070_0121785
358 Ga0501073_0002312
359 Ga0501073_0007766
360 Ga0501073_0017282
361 Ga0501074_0036279
362 Ga0501074_0040246
363 Ga0501074_0134099
364 Ga0501074_0779139
365 Ga0501075_0056205
366 Ga0501080_0066398
367 Ga0501080_0223122
368 Ga0501081_0010612
369 Ga0501081_0051999
370 Ga0501083_0000882
371 Ga0501045_0046661
372 nmdc:mga05p37_641783_c1
373 nmdc:mga09592_199257_c1
374 nmdc:mga09592_72818_c1
375 nmdc:mga06r32_166065_c1
376 nmdc:mga06r32_238751_c1
377 nmdc:mga08y16_99_c1
378 nmdc:mga0a205_876735_c1
379 Ga0501082_0000739
380 2506868966
381 2774901647
382 2795793810

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03309

Pan_kinase

Type III pantothenate kinase

2

61

0.94

PF03309

Pan_kinase

Type III pantothenate kinase

60

239

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h3g-assembly1.cif.gz_X-2 structure of the type iii pantothenate kinase (coax) from bacillus anthracis 0.9353 1 256
2h3g-assembly1.cif.gz_X-2 structure of the type iii pantothenate kinase (coax) from bacillus anthracis 0.928 1 256
3djc-assembly1.cif.gz_L crystal structure of pantothenate kinase from legionella pneumophila 0.9184 1 256
3djc-assembly1.cif.gz_L crystal structure of pantothenate kinase from legionella pneumophila 0.9114 1 256
6xb3-assembly6.cif.gz_L structure of acnpv poxin in post-reactive state with gp[2'-5']ap[3'] 0.9111 3 31
ID Description Score Start End Superfamily
af_P9WPA1_1_89_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.983 1 84 3.30.420.40
af_P9WPA1_91_271_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9586 87 257 3.30.420.40
2h3gX02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9518 87 256 3.30.420.40
2h3gX02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9403 87 256 3.30.420.40
af_P9WPA1_1_89_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9182 1 84 3.30.420.40
ID Description Score Start End GO Terms
AF-X8E323-F1-model_v4 Type III pantothenate kinase (EC 2.7.1.33) 0.98 1 151 GO:0004594
GO:0005524
GO:0005737
GO:0015937
AF-A0A3D5R0H1-F1-model_v4 Type III pantothenate kinase (EC 2.7.1.33) 0.9736 85 258 GO:0004594
GO:0005524
GO:0005737
GO:0015937
AF-U5EE53-F1-model_v4 Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase) 0.9713 1 256 GO:0004594
GO:0005524
GO:0005737
GO:0015937
GO:0046872
AF-A0A2V8M7C7-F1-model_v4 Type III pantothenate kinase (EC 2.7.1.33) 0.9704 90 255 GO:0004594
GO:0005524
GO:0005737
GO:0015937
AF-A0A7V1G810-F1-model_v4 Type III pantothenate kinase (EC 2.7.1.33) 0.9697 94 256 GO:0004594
GO:0005524
GO:0005737
GO:0015937

Map