F294378

General Info

Members Datasets Scaffolds Average Seq Length
191 35 382 264

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_092165|Ga0400483_092165_449_1318
Length 276
Sequence MYDDARSFDLKDYASGRYFPHMWCPGCGHGIVLNCLLRAIHELGLDKSEIVMTSGIGCSSRISGYVDFHSLHSIHGRALAFATGVKLSKPSLTTIVPMGDGDALAIGGNHFIHAARRNIDITAIVMNNRIYGMTGGQFSPLSGLGKKATTAPYTTIDNDFNVVELATAAGASFVARSTVFHAREAKDYLKKAITHKGFSVVEILSQCPTYFGRKNKQGDAPQMMEFYKANTVPIGSKKLEKNPDLIQRGIFVEDKDRAEYCEAYNKIIEAAMKGNA

Samples

Sample ID Description Type Environment
1 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
2 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
3 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
4 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
5 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
6 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
7 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
8 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
9 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
10 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
11 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
12 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
13 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
14 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
15 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
18 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
21 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
22 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
23 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
24 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
25 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
26 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
27 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
28 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
29 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
30 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
31 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
32 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
33 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
34 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
35 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.24
Metatranscriptomes 5.24
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 61.26
Stem 0
Stem Tuber 0
Unclassified 3.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400483_092165 3300039062 Bacteria 1676
2 Ga0265330_10001695 3300031235 Bacteria 12477
3 Ga0265329_10008012 3300031242 Bacteria 4041
4 Ga0265340_10097909 3300031247 Bacteria 1365
5 Ga0265316_10129015 3300031344 Bacteria 1905
6 Ga0316575_10001962 3300031665 Bacteria 6817
7 Ga0316575_10003261 3300031665 Bacteria 5575
8 Ga0316575_10027951 3300031665 Bacteria 2196
9 Ga0316575_10029203 3300031665 Bacteria 2152
10 Ga0316575_10067914 3300031665 Bacteria 1429
11 Ga0316579_10001393 3300031691 Bacteria 8760
12 Ga0316579_10004068 3300031691 Bacteria 5774
13 Ga0316579_10008979 3300031691 Bacteria 4192
14 Ga0316579_10014323 3300031691 Bacteria 3426
15 Ga0316579_10015728 3300031691 Bacteria 3291
16 Ga0265342_10001880 3300031712 Bacteria 18935
17 Ga0316576_10000966 3300031727 Bacteria 14763
18 Ga0316576_10001364 3300031727 Bacteria 13018
19 Ga0316576_10004609 3300031727 Bacteria 8290
20 Ga0316576_10008753 3300031727 Bacteria 6484
21 Ga0316576_10016151 3300031727 Bacteria 5033
22 Ga0316576_10024057 3300031727 Bacteria 4251
23 Ga0316576_10024207 3300031727 Bacteria 4238
24 Ga0316576_10038911 3300031727 Bacteria 3412
25 Ga0316576_10046475 3300031727 Bacteria 3142
26 Ga0316576_10047834 3300031727 Bacteria 3101
27 Ga0316576_10149813 3300031727 Bacteria 1758
28 Ga0316576_10194488 3300031727 Bacteria 1529
29 Ga0316576_10383500 3300031727 Bacteria 1043
30 Ga0316578_10000096 3300031728 Bacteria 20375
31 Ga0316578_10003555 3300031728 Bacteria 7157
32 Ga0316578_10011047 3300031728 Bacteria 4706
33 Ga0316578_10030349 3300031728 Bacteria 3072
34 Ga0316578_10079117 3300031728 Bacteria 1954
35 Ga0316578_10096443 3300031728 Bacteria 1770
36 Ga0316578_10104564 3300031728 Bacteria 1698
37 Ga0316578_10181086 3300031728 Bacteria 1270
38 Ga0316578_10259668 3300031728 Bacteria 1041
39 Ga0316577_10000821 3300031733 Bacteria 13521
40 Ga0316577_10007559 3300031733 Bacteria 5797
41 Ga0316577_10009358 3300031733 Bacteria 5271
42 Ga0316577_10013117 3300031733 Bacteria 4524
43 Ga0316577_10027665 3300031733 Bacteria 3162
44 Ga0316577_10066944 3300031733 Bacteria 2005
45 Ga0316577_10068472 3300031733 Bacteria 1982
46 Ga0316577_10087831 3300031733 Bacteria 1740
47 Ga0316583_10001895 3300032133 Bacteria 7137
48 Ga0316583_10004018 3300032133 Bacteria 5227
49 Ga0316583_10013770 3300032133 Bacteria 2918
50 Ga0316583_10017708 3300032133 Bacteria 2559
51 Ga0316583_10021212 3300032133 Bacteria 2329
52 Ga0316583_10023824 3300032133 Unclassified 2185
53 Ga0316583_10039531 3300032133 Bacteria 1670
54 Ga0316585_10000357 3300032137 Bacteria 10459
55 Ga0316585_10001638 3300032137 Bacteria 5930
56 Ga0316585_10027207 3300032137 Bacteria 1783
57 Ga0316585_10066169 3300032137 Bacteria 1171
58 Ga0316580_10000113 3300032139 Bacteria 15145
59 Ga0316580_10009592 3300032139 Bacteria 2912
60 Ga0316580_10029778 3300032139 Bacteria 1690
61 Ga0316593_10023794 3300032168 Bacteria 1937
62 Ga0316593_10028228 3300032168 Bacteria 1807
63 Ga0316592_1016662 3300033524 Bacteria 1537
64 Ga0316586_1019484 3300033527 Bacteria 1109
65 Ga0316588_1001696 3300033528 Bacteria 3692
66 Ga0316588_1004492 3300033528 Bacteria 2647
67 Ga0316588_1005487 3300033528 Bacteria 2473
68 Ga0316596_1006329 3300033541 Bacteria 2750
69 Ga0316596_1017984 3300033541 Bacteria 1783
70 Ga0316596_1021419 3300033541 Bacteria 1648
71 Ga0316574_0000976 3300035398 Bacteria 12828
72 Ga0316574_0022027 3300035398 Bacteria 3790
73 Ga0316574_0025756 3300035398 Bacteria 3533
74 Ga0316574_0033958 3300035398 Bacteria 3107
75 Ga0316574_0034759 3300035398 Bacteria 3075
76 Ga0316574_0039709 3300035398 Bacteria 2895
77 Ga0316574_0290338 3300035398 Bacteria 1041
78 Ga0316582_0000585 3300036647 Bacteria 14103
79 Ga0316582_0003372 3300036647 Bacteria 7819
80 Ga0316582_0003720 3300036647 Bacteria 7551
81 Ga0316582_0006859 3300036647 Bacteria 6019
82 Ga0316582_0022759 3300036647 Bacteria 3726
83 Ga0316582_0065677 3300036647 Bacteria 2336
84 Ga0316582_0072706 3300036647 Bacteria 2230
85 Ga0316582_0083043 3300036647 Bacteria 2095
86 Ga0316582_0105858 3300036647 Bacteria 1867
87 Ga0316582_0127513 3300036647 Bacteria 1707
88 Ga0316582_0143663 3300036647 Unclassified 1610
89 Ga0316582_0143761 3300036647 Bacteria 1609
90 Ga0316582_0171579 3300036647 Bacteria 1473
91 Ga0316582_0200535 3300036647 Unclassified 1361
92 Ga0316582_0371312 3300036647 Unclassified 984
93 Ga0316582_0622535 3300036647 Bacteria 742
94 Ga0316584_0011295 3300036712 Bacteria 6268
95 Ga0316584_0012128 3300036712 Bacteria 6072
96 Ga0316584_0012884 3300036712 Bacteria 5904
97 Ga0316584_0050887 3300036712 Bacteria 3097
98 Ga0316584_0052681 3300036712 Bacteria 3043
99 Ga0316584_0059993 3300036712 Bacteria 2848
100 Ga0316584_0060023 3300036712 Bacteria 2848
101 Ga0316584_0094450 3300036712 Bacteria 2239
102 Ga0316584_0095173 3300036712 Bacteria 2230
103 Ga0316584_0165495 3300036712 Bacteria 1642
104 Ga0316584_0206869 3300036712 Unclassified 1446
105 Ga0316584_0208096 3300036712 Bacteria 1441
106 Ga0316584_0307931 3300036712 Bacteria 1145
107 Ga0316584_0391335 3300036712 Bacteria 992
108 Ga0316581_0005022 3300037588 Unclassified 3414
109 Ga0316581_0025762 3300037588 Bacteria 1751
110 Ga0400484_01437 3300038725 Bacteria 1739
111 Ga0400484_03648 3300038725 Bacteria 7194
112 Ga0400484_10377 3300038725 Bacteria 16508
113 Ga0400484_12771 3300038725 Bacteria 1620
114 Ga0400484_14146 3300038725 Bacteria 1169
115 Ga0400484_19674 3300038725 Bacteria 1336
116 Ga0400484_20872 3300038725 Bacteria 1315
117 Ga0400484_21401 3300038725 Bacteria 2588
118 Ga0400484_27991 3300038725 Unclassified 4874
119 Ga0400484_40741 3300038725 Bacteria 3545
120 Ga0400490_05740 3300038726 Bacteria 1336
121 Ga0400490_11168 3300038726 Bacteria 44943
122 Ga0400490_20164 3300038726 Bacteria 20003
123 Ga0400490_27913 3300038726 Bacteria 3678
124 Ga0400490_46339 3300038726 Bacteria 3339
125 Ga0400490_54376 3300038726 Bacteria 2989
126 Ga0400490_59596 3300038726 Bacteria 3066
127 Ga0400490_60578 3300038726 Bacteria 6510
128 Ga0400491_00683 3300038727 Bacteria 5263
129 Ga0400491_01864 3300038727 Bacteria 5197
130 Ga0400491_14882 3300038727 Bacteria 5235
131 Ga0400485_00702 3300038735 Bacteria 5781
132 Ga0400485_02019 3300038735 Bacteria 45667
133 Ga0400485_02243 3300038735 Bacteria 8332
134 Ga0400485_12671 3300038735 Bacteria 7377
135 Ga0400488_05627 3300038741 Bacteria 1181
136 Ga0400488_07458 3300038741 Bacteria 1352
137 Ga0400488_22426 3300038741 Bacteria 11673
138 Ga0400488_27000 3300038741 Bacteria 11776
139 Ga0400488_33161 3300038741 Bacteria 4270
140 Ga0400488_36079 3300038741 Bacteria 3723
141 Ga0400488_42967 3300038741 Bacteria 6149
142 Ga0400488_49953 3300038741 Bacteria 1982
143 Ga0400488_56963 3300038741 Bacteria 12836
144 Ga0400488_57622 3300038741 Bacteria 2010
145 Ga0400486_05863 3300038742 Bacteria 74939
146 Ga0400486_06321 3300038742 Bacteria 11398
147 Ga0400486_11955 3300038742 Bacteria 6878
148 Ga0400486_22205 3300038742 Bacteria 7225
149 Ga0400486_24542 3300038742 Bacteria 4553
150 Ga0400486_28675 3300038742 Bacteria 11830
151 Ga0400483_003236 3300039062 Bacteria 4153
152 Ga0400483_017888 3300039062 Bacteria 1251
153 Ga0400483_028717 3300039062 Bacteria 96059
154 Ga0400483_059408 3300039062 Bacteria 2954
155 Ga0400483_079234 3300039062 Bacteria 6422
156 Ga0400483_127462 3300039062 Bacteria 5908
157 Ga0400483_142951 3300039062 Bacteria 2088
158 Ga0400483_173870 3300039062 Bacteria 3024
159 Ga0400483_184724 3300039062 Bacteria 110855
160 Ga0400483_195049 3300039062 Bacteria 3440
161 Ga0400483_210051 3300039062 Bacteria 78210
162 Ga0400483_245677 3300039062 Bacteria 2745
163 Ga0400483_261696 3300039062 Bacteria 5094
164 Ga0400483_272271 3300039062 Bacteria 1265
165 Ga0400483_275704 3300039062 Bacteria 5448
166 Ga0400483_277904 3300039062 Bacteria 1235
167 Ga0400483_278250 3300039062 Bacteria 6722
168 Ga0400483_280660 3300039062 Bacteria 2043
169 Ga0400489_13122 3300039093 Bacteria 1462
170 Ga0400489_15231 3300039093 Bacteria 7236
171 Ga0400489_30912 3300039093 Bacteria 12740
172 Ga0400489_58797 3300039093 Bacteria 18474
173 Ga0400489_63631 3300039093 Bacteria 5082
174 Ga0400489_80279 3300039093 Bacteria 2082
175 Ga0400489_84730 3300039093 Bacteria 3564
176 Ga0400487_04834 3300039110 Bacteria 4184
177 Ga0400487_14110 3300039110 Bacteria 2133
178 Ga0400487_26528 3300039110 Bacteria 2503
179 Ga0400487_50236 3300039110 Bacteria 22343
180 Ga0400487_59437 3300039110 Bacteria 6492
181 Ga0400487_59888 3300039110 Bacteria 1637
182 Ga0453684_0001450 3300044712 Bacteria 67391
183 Ga0453684_0005955 3300044712 Bacteria 23638
184 Ga0453684_0037927 3300044712 Bacteria 6603
185 Ga0453684_0322377 3300044712 Bacteria 1749
186 Ga0453684_0338347 3300044712 Bacteria 1700
187 Ga0453684_0474933 3300044712 Bacteria 1388
188 Ga0453684_0503212 3300044712 Bacteria 1341
189 Ga0451576_0027558 3300045051 Bacteria 6100
190 Ga0495580_0298515 3300046472 Bacteria 1097
191 2740992206 2740891818 Bacteria 6711283
192 Ga0400483_092165
193 Ga0265330_10001695
194 Ga0265329_10008012
195 Ga0265340_10097909
196 Ga0265316_10129015
197 Ga0316575_10001962
198 Ga0316575_10003261
199 Ga0316575_10027951
200 Ga0316575_10029203
201 Ga0316575_10067914
202 Ga0316579_10001393
203 Ga0316579_10004068
204 Ga0316579_10008979
205 Ga0316579_10014323
206 Ga0316579_10015728
207 Ga0265342_10001880
208 Ga0316576_10000966
209 Ga0316576_10001364
210 Ga0316576_10004609
211 Ga0316576_10008753
212 Ga0316576_10016151
213 Ga0316576_10024057
214 Ga0316576_10024207
215 Ga0316576_10038911
216 Ga0316576_10046475
217 Ga0316576_10047834
218 Ga0316576_10149813
219 Ga0316576_10194488
220 Ga0316576_10383500
221 Ga0316578_10000096
222 Ga0316578_10003555
223 Ga0316578_10011047
224 Ga0316578_10030349
225 Ga0316578_10079117
226 Ga0316578_10096443
227 Ga0316578_10104564
228 Ga0316578_10181086
229 Ga0316578_10259668
230 Ga0316577_10000821
231 Ga0316577_10007559
232 Ga0316577_10009358
233 Ga0316577_10013117
234 Ga0316577_10027665
235 Ga0316577_10066944
236 Ga0316577_10068472
237 Ga0316577_10087831
238 Ga0316583_10001895
239 Ga0316583_10004018
240 Ga0316583_10013770
241 Ga0316583_10017708
242 Ga0316583_10021212
243 Ga0316583_10023824
244 Ga0316583_10039531
245 Ga0316585_10000357
246 Ga0316585_10001638
247 Ga0316585_10027207
248 Ga0316585_10066169
249 Ga0316580_10000113
250 Ga0316580_10009592
251 Ga0316580_10029778
252 Ga0316593_10023794
253 Ga0316593_10028228
254 Ga0316592_1016662
255 Ga0316586_1019484
256 Ga0316588_1001696
257 Ga0316588_1004492
258 Ga0316588_1005487
259 Ga0316596_1006329
260 Ga0316596_1017984
261 Ga0316596_1021419
262 Ga0316574_0000976
263 Ga0316574_0022027
264 Ga0316574_0025756
265 Ga0316574_0033958
266 Ga0316574_0034759
267 Ga0316574_0039709
268 Ga0316574_0290338
269 Ga0316582_0000585
270 Ga0316582_0003372
271 Ga0316582_0003720
272 Ga0316582_0006859
273 Ga0316582_0022759
274 Ga0316582_0065677
275 Ga0316582_0072706
276 Ga0316582_0083043
277 Ga0316582_0105858
278 Ga0316582_0127513
279 Ga0316582_0143663
280 Ga0316582_0143761
281 Ga0316582_0171579
282 Ga0316582_0200535
283 Ga0316582_0371312
284 Ga0316582_0622535
285 Ga0316584_0011295
286 Ga0316584_0012128
287 Ga0316584_0012884
288 Ga0316584_0050887
289 Ga0316584_0052681
290 Ga0316584_0059993
291 Ga0316584_0060023
292 Ga0316584_0094450
293 Ga0316584_0095173
294 Ga0316584_0165495
295 Ga0316584_0206869
296 Ga0316584_0208096
297 Ga0316584_0307931
298 Ga0316584_0391335
299 Ga0316581_0005022
300 Ga0316581_0025762
301 Ga0400484_01437
302 Ga0400484_03648
303 Ga0400484_10377
304 Ga0400484_12771
305 Ga0400484_14146
306 Ga0400484_19674
307 Ga0400484_20872
308 Ga0400484_21401
309 Ga0400484_27991
310 Ga0400484_40741
311 Ga0400490_05740
312 Ga0400490_11168
313 Ga0400490_20164
314 Ga0400490_27913
315 Ga0400490_46339
316 Ga0400490_54376
317 Ga0400490_59596
318 Ga0400490_60578
319 Ga0400491_00683
320 Ga0400491_01864
321 Ga0400491_14882
322 Ga0400485_00702
323 Ga0400485_02019
324 Ga0400485_02243
325 Ga0400485_12671
326 Ga0400488_05627
327 Ga0400488_07458
328 Ga0400488_22426
329 Ga0400488_27000
330 Ga0400488_33161
331 Ga0400488_36079
332 Ga0400488_42967
333 Ga0400488_49953
334 Ga0400488_56963
335 Ga0400488_57622
336 Ga0400486_05863
337 Ga0400486_06321
338 Ga0400486_11955
339 Ga0400486_22205
340 Ga0400486_24542
341 Ga0400486_28675
342 Ga0400483_003236
343 Ga0400483_017888
344 Ga0400483_028717
345 Ga0400483_059408
346 Ga0400483_079234
347 Ga0400483_127462
348 Ga0400483_142951
349 Ga0400483_173870
350 Ga0400483_184724
351 Ga0400483_195049
352 Ga0400483_210051
353 Ga0400483_245677
354 Ga0400483_261696
355 Ga0400483_272271
356 Ga0400483_275704
357 Ga0400483_277904
358 Ga0400483_278250
359 Ga0400483_280660
360 Ga0400489_13122
361 Ga0400489_15231
362 Ga0400489_30912
363 Ga0400489_58797
364 Ga0400489_63631
365 Ga0400489_80279
366 Ga0400489_84730
367 Ga0400487_04834
368 Ga0400487_14110
369 Ga0400487_26528
370 Ga0400487_50236
371 Ga0400487_59437
372 Ga0400487_59888
373 Ga0453684_0001450
374 Ga0453684_0005955
375 Ga0453684_0037927
376 Ga0453684_0322377
377 Ga0453684_0338347
378 Ga0453684_0474933
379 Ga0453684_0503212
380 Ga0451576_0027558
381 Ga0495580_0298515
382 2740992206

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

55

203

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6n2o-assembly1.cif.gz_D 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus with 2-oxoglutarate, coenzyme a and succinyl-coa bound 0.8534 5 251
1jsc-assembly1.cif.gz_A crystal structure of the catalytic subunit of yeast acetohydroxyacid synthase: a target for herbicidal inhibitors 0.8101 10 187
5b46-assembly1.cif.gz_B-2 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - ligand free form 0.8068 5 253
6n2o-assembly1.cif.gz_D 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus with 2-oxoglutarate, coenzyme a and succinyl-coa bound 0.8062 5 251
5b48-assembly1.cif.gz_B 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai 0.7938 5 251
ID Description Score Start End Superfamily
af_Q57957_74_243_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8315 63 226 3.40.50.970
af_Q2FZ04_70_219_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8173 60 220 3.40.50.970
af_Q2FZ04_70_219_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8123 60 220 3.40.50.970
1jscA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8033 10 187 3.40.50.970
af_Q57957_74_243_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.7993 63 226 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7C4N7A4-F1-model_v4 2-oxoacid:ferredoxin oxidoreductase subunit beta 0.911 1 252 GO:0016625
GO:0030976
AF-A0A353H753-F1-model_v4 2-oxoacid:ferredoxin oxidoreductase subunit beta 0.9105 1 251 GO:0016625
GO:0030976
AF-A0A0F2NL82-F1-model_v4 2-oxoacid:ferredoxin oxidoreductase subunit beta 0.908 1 252 GO:0016625
GO:0030976
AF-A0A7J0BIY3-F1-model_v4 2-oxoglutarate ferredoxin oxidoreductase subunit beta 0.9058 1 254 GO:0016625
GO:0030976
AF-A0A0M3DGX1-F1-model_v4 2-oxoacid:ferredoxin oxidoreductase subunit beta 0.9052 1 250 GO:0016625
GO:0030976

Map