F294348

General Info

Members Datasets Scaffolds Average Seq Length
191 149 171 498

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0129858|Ga0373925_0129858_13_1659
Length 548
Sequence MSAVIKEAQASSPVAHFIATPKKLLIDGKWVAAASGKTFEVKNPATGSTIARAAEGDKADIDLAVRAARRAFESAPWATMTPSERSKVTWRVGDLITKYADELAELEALDNGKPMAVARVADVALAADILQYMAGWCTKIEGKTIPISVIYTPGAKYHSYTSPEPIGVVGQIIPWNFPLLMAAWKLAPALATGCTVVLKVAEETPLSALRLGEILLEAGIPPGVVNIVTGFGETAGAALAAHPGVDKVAFTGSTEVGRLIVQAAARDLKHVSLELGGKSPNIILEDADLDVAIPGAANAIFFNHGQCCCAGSRLYVHERHFDRVVAGVSEHAKSIKLGSGLDPTSQMGPMVSEIQRDRVSSYLEAGKKEGAKATAGGKAREGAGYFVEPTVFVDTKPGMKIVKEEIFGPVVTVAPFTDAEETLVQEANDTIYGLAAGIWTRDVSKAHALAARLKAGTVWINCYNIFDAALPFGGYKQSGWGREMGEAVLDSYLATKAVTIGLRHSAPEAGSRDPAWAGSLISQVHRAPPRNAQGRAFIWPEVQRKVKE

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
3 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
4 2643221576 Nocardioides sp. Root614 Isolate Unclassified
5 2643221590 Nocardioides sp. Root682 Isolate Unclassified
6 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
7 2721755523 Delftia sp. HK171 Isolate Unclassified
8 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
9 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
10 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
11 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
12 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
13 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
14 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
15 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
16 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
17 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
18 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
19 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
20 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
21 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
85 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
105 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
113 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
148 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.53
Metatranscriptomes 0
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.71
Nodule 1.05
Rhizoplane 6.81
Rhizosphere 68.06
Stem 0
Stem Tuber 0
Unclassified 19.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055532_1000024 3300003758 Bacteria 244166
2 Ga0055536_1015780 3300003781 Bacteria 2563
3 Ga0068868_100178467 3300005338 Bacteria 1761
4 Ga0070673_100102874 3300005364 Bacteria 2356
5 Ga0070667_100109929 3300005367 Bacteria 2389
6 Ga0070709_10051384 3300005434 Bacteria 2587
7 Ga0070713_100018083 3300005436 Bacteria 5353
8 Ga0070713_100028139 3300005436 Bacteria 4435
9 Ga0070713_100047795 3300005436 Bacteria 3519
10 Ga0070711_100094110 3300005439 Bacteria 2165
11 Ga0070708_100010514 3300005445 Bacteria 7502
12 Ga0070708_100012399 3300005445 Bacteria 6957
13 Ga0070708_100031697 3300005445 Bacteria 4577
14 Ga0070678_100038850 3300005456 Bacteria 3354
15 Ga0070706_100024072 3300005467 Bacteria 5607
16 Ga0070706_100034402 3300005467 Bacteria 4681
17 Ga0070707_100019932 3300005468 Bacteria 6322
18 Ga0070707_100034872 3300005468 Bacteria 4798
19 Ga0070698_100037470 3300005471 Bacteria 4999
20 Ga0070699_100007927 3300005518 Bacteria 9224
21 Ga0070697_100013319 3300005536 Bacteria 6450
22 Ga0070695_100015005 3300005545 Bacteria 4674
23 Ga0070665_100003894 3300005548 Bacteria 15772
24 Ga0070665_100033979 3300005548 Bacteria 5129
25 Ga0070665_100064240 3300005548 Bacteria 3680
26 Ga0068855_100001305 3300005563 Bacteria 30883
27 Ga0068855_100002844 3300005563 Bacteria 21273
28 Ga0068855_100005007 3300005563 Bacteria 16169
29 Ga0068859_100045697 3300005617 Bacteria 4399
30 Ga0068863_100034198 3300005841 Bacteria 4842
31 Ga0068863_100074372 3300005841 Bacteria 3214
32 Ga0070717_10000530 3300006028 Bacteria 24179
33 Ga0070717_10022533 3300006028 Bacteria 4978
34 Ga0070717_10057261 3300006028 Bacteria 3222
35 Ga0070716_100090214 3300006173 Bacteria 1853
36 Ga0075370_10023330 3300006353 Bacteria 3406
37 Ga0075436_100064843 3300006914 Bacteria 2525
38 Ga0097620_100045699 3300006931 Bacteria 4399
39 Ga0079104_1000011 3300006946 Bacteria 359962
40 Ga0075435_100071981 3300007076 Bacteria 2824
41 Ga0105240_10000791 3300009093 Bacteria 57291
42 Ga0105240_10000962 3300009093 Bacteria 51334
43 Ga0105243_10000624 3300009148 Bacteria 35279
44 Ga0105241_10010889 3300009174 Bacteria 6672
45 Ga0105242_10006473 3300009176 Bacteria 9021
46 Ga0105237_10006489 3300009545 Bacteria 12969
47 Ga0105237_10015576 3300009545 Bacteria 7907
48 Ga0105238_10146865 3300009551 Bacteria 2334
49 Ga0157378_10147025 3300013297 Bacteria 2193
50 Ga0157372_10319993 3300013307 Bacteria 1806
51 Ga0157375_10171873 3300013308 Bacteria 2315
52 Ga0182008_10005736 3300014497 Bacteria 7029
53 Ga0182007_10000520 3300015262 Bacteria 22665
54 Ga0163161_10000665 3300017792 Bacteria 27470
55 Ga0213876_10096894 3300021384 Bacteria 1563
56 Ga0213875_10051819 3300021388 Bacteria 1922
57 Ga0209147_100020 3300025229 Bacteria 474055
58 Ga0209676_1008173 3300025292 Bacteria 4725
59 Ga0209025_1001160 3300025294 Bacteria 37296
60 Ga0207642_10029500 3300025899 Bacteria 2273
61 Ga0207684_10004670 3300025910 Bacteria 12861
62 Ga0207684_10053629 3300025910 Bacteria 3422
63 Ga0207695_10004353 3300025913 Bacteria 19394
64 Ga0207695_10237726 3300025913 Bacteria 1724
65 Ga0207671_10034503 3300025914 Bacteria 3758
66 Ga0207693_10006287 3300025915 Bacteria 9853
67 Ga0207663_10070150 3300025916 Bacteria 2257
68 Ga0207646_10004480 3300025922 Bacteria 15144
69 Ga0207646_10061668 3300025922 Bacteria 3347
70 Ga0207700_10027784 3300025928 Bacteria 3968
71 Ga0207686_10034352 3300025934 Bacteria 3035
72 Ga0207709_10000074 3300025935 Bacteria 174947
73 Ga0207709_10000373 3300025935 Bacteria 45160
74 Ga0207665_10095351 3300025939 Bacteria 2067
75 Ga0207667_10002958 3300025949 Bacteria 21088
76 Ga0207667_10013161 3300025949 Bacteria 9484
77 Ga0207658_10127166 3300025986 Bacteria 2041
78 Ga0207677_10174121 3300026023 Bacteria 1686
79 Ga0207641_10039259 3300026088 Bacteria 3959
80 Ga0207648_10120565 3300026089 Bacteria 2306
81 Ga0209281_1000005 3300027111 Bacteria 1242284
82 Ga0268266_10007998 3300028379 Bacteria 9453
83 Ga0268266_10014539 3300028379 Bacteria 6765
84 Ga0268266_10034735 3300028379 Bacteria 4288
85 Ga0265336_10002068 3300028666 Bacteria 8542
86 Ga0265338_10005433 3300028800 Bacteria 16633
87 Ga0265338_10062666 3300028800 Bacteria 3248
88 Ga0307511_10016985 3300030521 Bacteria 6995
89 Ga0265328_10038666 3300031239 Bacteria 1760
90 Ga0265320_10026946 3300031240 Bacteria 3003
91 Ga0265340_10038712 3300031247 Bacteria 2357
92 Ga0265339_10000394 3300031249 Bacteria 34437
93 Ga0265327_10000004 3300031251 Bacteria 803973
94 Ga0307516_10002416 3300031730 Bacteria 24976
95 Ga0307413_10131098 3300031824 Bacteria 1716
96 Ga0307416_100176488 3300032002 Bacteria 1997
97 Ga0307411_10013600 3300032005 Bacteria 4497
98 Ga0373943_0036227 3300035170 Bacteria 2362
99 Ga0373927_0019897 3300035695 Bacteria 4402
100 Ga0373933_0017366 3300035724 Bacteria 4038
101 Ga0373937_0007865 3300036401 Bacteria 9242
102 Ga0373925_0129858 3300037068 Bacteria 1964
103 Ga0395899_0000361 3300037312 Bacteria 55292
104 Ga0395900_0000237 3300037418 Bacteria 86507
105 Ga0395905_0004340 3300037471 Bacteria 14768
106 Ga0395905_0110582 3300037471 Bacteria 2580
107 Ga0395901_0000028 3300038443 Bacteria 242653
108 Ga0436365_1014486 3300039437 Bacteria 2773
109 Ga0436365_1798095 3300039437 Bacteria 4951
110 Ga0436360_1089422 3300039438 Bacteria 1637
111 Ga0436363_0583059 3300039450 Bacteria 2364
112 Ga0466963_0121628 3300044694 Bacteria 1797
113 Ga0466968_0000008 3300044735 Bacteria 73540
114 Ga0466959_0053719 3300045049 Bacteria 2944
115 Ga0495629_0025382 3300046459 Bacteria 4213
116 Ga0495641_0021405 3300046461 Bacteria 3254
117 Ga0495580_0000015 3300046472 Bacteria 94575
118 Ga0495580_0066184 3300046472 Bacteria 2530
119 Ga0495580_0159043 3300046472 Bacteria 1564
120 Ga0495605_0000838 3300046474 Bacteria 21580
121 Ga0495623_0027857 3300046679 Bacteria 3637
122 Ga0495613_0067931 3300046689 Bacteria 2601
123 Ga0495581_0009473 3300047315 Bacteria 5636
124 Ga0495581_0010772 3300047315 Bacteria 5288
125 Ga0495674_0113399 3300047319 Bacteria 2296
126 Ga0495593_0010523 3300047673 Bacteria 5338
127 Ga0495602_0093860 3300048088 Bacteria 2481
128 Ga0496100_0030678 3300048903 Bacteria 3336
129 Ga0496102_0111484 3300048905 Bacteria 2551
130 Ga0496102_0152479 3300048905 Bacteria 2172
131 Ga0496104_0073510 3300048907 Bacteria 3252
132 Ga0496105_0081626 3300048908 Bacteria 2670
133 Ga0496109_0142023 3300048912 Bacteria 2245
134 Ga0496111_0126362 3300048914 Bacteria 1890
135 Ga0496112_0160716 3300048915 Bacteria 2213
136 Ga0496112_0203058 3300048915 Bacteria 1941
137 Ga0496114_0097946 3300048917 Bacteria 2499
138 Ga0496115_0038076 3300048918 Bacteria 3814
139 Ga0496116_0018198 3300048919 Bacteria 5426
140 Ga0496117_0000024 3300048920 Bacteria 418750
141 Ga0496117_0000095 3300048920 Bacteria 198731
142 Ga0496118_0000003 3300048921 Bacteria 773148
143 Ga0496118_0000014 3300048921 Bacteria 561628
144 Ga0496119_0000871 3300048922 Bacteria 39656
145 Ga0496119_0002402 3300048922 Bacteria 20561
146 Ga0496119_0024220 3300048922 Bacteria 4274
147 Ga0496120_0001744 3300048923 Bacteria 24694
148 Ga0496120_0015664 3300048923 Bacteria 4989
149 Ga0496120_0027349 3300048923 Bacteria 3510
150 Ga0496121_0034360 3300048924 Bacteria 4565
151 Ga0496121_0046988 3300048924 Bacteria 3687
152 Ga0496125_0004128 3300048928 Bacteria 16962
153 Ga0496125_0004954 3300048928 Bacteria 15066
154 Ga0496125_0021998 3300048928 Bacteria 5930
155 Ga0496125_0061301 3300048928 Bacteria 3017
156 Ga0496126_0000004 3300048929 Bacteria 925026
157 Ga0496126_0126411 3300048929 Bacteria 2212
158 Ga0501298_002738 3300049521 Bacteria 2690
159 Ga0501032_0001536 3300049569 Bacteria 18414
160 Ga0501034_0014512 3300049571 Bacteria 8112
161 Ga0501036_0030910 3300049572 Bacteria 4525
162 Ga0501039_0000878 3300049575 Bacteria 21820
163 Ga0501043_0010144 3300049579 Bacteria 7384
164 Ga0501079_0125111 3300049741 Bacteria 2000
165 Ga0501044_0054891 3300049823 Bacteria 4093
166 nmdc:mga06r32_7979_c1 3300050510 Bacteria 9515
167 nmdc:mga0rr50_94297_c1 3300050513 Bacteria 2337
168 nmdc:mga08x19_41429_c1 3300050514 Bacteria 2933
169 Ga0500643_000470 3300053087 Bacteria 29540
170 Ga0500652_001019 3300053131 Bacteria 9130
171 Ga0500568_0008278 3300053139 Bacteria 5029

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046472 Ga0495580_0159043 Ga0495580_0159043_284_1549 414
2 3300048924 Ga0496121_0034360 Ga0496121_0034360_11_1276 414
3 3300005617 Ga0068859_100045697 Ga0068859_1000456974 438
4 3300006931 Ga0097620_100045699 Ga0097620_1000456994 438
5 3300031824 Ga0307413_10131098 Ga0307413_101310981 442
6 3300045049 Ga0466959_0053719 Ga0466959_0053719_919_2289 449
7 3300049741 Ga0501079_0125111 Ga0501079_0125111_341_1837 450
8 3300005445 Ga0070708_100012399 Ga0070708_1000123993 458
9 3300050513 nmdc:mga0rr50_94297_c1 nmdc:mga0rr50_94297_c1_319_1698 458
10 3300048922 Ga0496119_0000871 Ga0496119_0000871_28337_29854 463
11 3300048924 Ga0496121_0046988 Ga0496121_0046988_338_1855 463
12 3300048928 Ga0496125_0004128 Ga0496125_0004128_3186_4703 463
13 3300005467 Ga0070706_100034402 Ga0070706_1000344024 466
14 3300025910 Ga0207684_10053629 Ga0207684_100536292 466
15 3300025292 Ga0209676_1008173 Ga0209676_10081733 471
16 iso_pu_bacteria 2928142448 2928143015 472
17 iso_pu_bacteria 2643221576 2643893404 473
18 iso_pu_bacteria 2643221590 2643962454 473
19 iso_pu_bacteria 2751185725 2753035753 473
20 iso_pu_bacteria 2751185792 2753326222 473
21 iso_pu_bacteria 2808606439 2809197041 473
22 3300003781 Ga0055536_1015780 Ga0055536_10157801 474
23 3300006353 Ga0075370_10023330 Ga0075370_100233302 474
24 3300006914 Ga0075436_100064843 Ga0075436_1000648432 474
25 3300025294 Ga0209025_1001160 Ga0209025_100116014 474
26 3300031251 Ga0265327_10000004 Ga0265327_10000004710 474
27 3300032002 Ga0307416_100176488 Ga0307416_1001764882 474
28 3300047315 Ga0495581_0010772 Ga0495581_0010772_2171_3679 474
29 3300049569 Ga0501032_0001536 Ga0501032_0001536_14487_15998 474
30 3300049571 Ga0501034_0014512 Ga0501034_0014512_6548_8059 474
31 3300049572 Ga0501036_0030910 Ga0501036_0030910_74_1585 474
32 3300049575 Ga0501039_0000878 Ga0501039_0000878_16405_17916 474
33 3300049579 Ga0501043_0010144 Ga0501043_0010144_5308_6819 474
34 3300049823 Ga0501044_0054891 Ga0501044_0054891_2294_3805 474
35 3300050514 nmdc:mga08x19_41429_c1 nmdc:mga08x19_41429_c1_498_1988 474
36 iso_pu_bacteria 2523231044 2523383984 474
37 iso_pu_bacteria 2811994874 2812330781 474
38 3300005338 Ga0068868_100178467 Ga0068868_1001784671 475
39 3300005364 Ga0070673_100102874 Ga0070673_1001028741 475
40 3300005367 Ga0070667_100109929 Ga0070667_1001099291 475
41 3300005434 Ga0070709_10051384 Ga0070709_100513841 475
42 3300005436 Ga0070713_100028139 Ga0070713_1000281391 475
43 3300005436 Ga0070713_100047795 Ga0070713_1000477951 475
44 3300005439 Ga0070711_100094110 Ga0070711_1000941102 475
45 3300005445 Ga0070708_100031697 Ga0070708_1000316974 475
46 3300005456 Ga0070678_100038850 Ga0070678_1000388501 475
47 3300005467 Ga0070706_100024072 Ga0070706_1000240726 475
48 3300005468 Ga0070707_100019932 Ga0070707_1000199322 475
49 3300005471 Ga0070698_100037470 Ga0070698_1000374702 475
50 3300005518 Ga0070699_100007927 Ga0070699_1000079272 475
51 3300005536 Ga0070697_100013319 Ga0070697_1000133192 475
52 3300005545 Ga0070695_100015005 Ga0070695_1000150055 475
53 3300005548 Ga0070665_100064240 Ga0070665_1000642403 475
54 3300005563 Ga0068855_100001305 Ga0068855_10000130518 475
55 3300005563 Ga0068855_100002844 Ga0068855_10000284412 475
56 3300005841 Ga0068863_100074372 Ga0068863_1000743722 475
57 3300006028 Ga0070717_10000530 Ga0070717_100005301 475
58 3300006028 Ga0070717_10022533 Ga0070717_100225332 475
59 3300006173 Ga0070716_100090214 Ga0070716_1000902141 475
60 3300009093 Ga0105240_10000962 Ga0105240_1000096240 475
61 3300009148 Ga0105243_10000624 Ga0105243_1000062427 475
62 3300009174 Ga0105241_10010889 Ga0105241_100108895 475
63 3300009176 Ga0105242_10006473 Ga0105242_100064736 475
64 3300009545 Ga0105237_10006489 Ga0105237_100064897 475
65 3300013297 Ga0157378_10147025 Ga0157378_101470251 475
66 3300013308 Ga0157375_10171873 Ga0157375_101718732 475
67 3300021384 Ga0213876_10096894 Ga0213876_100968941 475
68 3300021388 Ga0213875_10051819 Ga0213875_100518192 475
69 3300025899 Ga0207642_10029500 Ga0207642_100295002 475
70 3300025910 Ga0207684_10004670 Ga0207684_100046704 475
71 3300025913 Ga0207695_10004353 Ga0207695_100043531 475
72 3300025915 Ga0207693_10006287 Ga0207693_100062876 475
73 3300025916 Ga0207663_10070150 Ga0207663_100701501 475
74 3300025922 Ga0207646_10004480 Ga0207646_1000448012 475
75 3300025928 Ga0207700_10027784 Ga0207700_100277843 475
76 3300025934 Ga0207686_10034352 Ga0207686_100343522 475
77 3300025935 Ga0207709_10000373 Ga0207709_1000037323 475
78 3300025939 Ga0207665_10095351 Ga0207665_100953511 475
79 3300025949 Ga0207667_10002958 Ga0207667_100029588 475
80 3300025949 Ga0207667_10013161 Ga0207667_100131616 475
81 3300025986 Ga0207658_10127166 Ga0207658_101271661 475
82 3300026023 Ga0207677_10174121 Ga0207677_101741211 475
83 3300026088 Ga0207641_10039259 Ga0207641_100392593 475
84 3300026089 Ga0207648_10120565 Ga0207648_101205651 475
85 3300030521 Ga0307511_10016985 Ga0307511_100169853 475
86 3300031730 Ga0307516_10002416 Ga0307516_100024164 475
87 3300035170 Ga0373943_0036227 Ga0373943_0036227_536_2044 475
88 3300035695 Ga0373927_0019897 Ga0373927_0019897_1311_2819 475
89 3300037312 Ga0395899_0000361 Ga0395899_0000361_32582_34129 475
90 3300037418 Ga0395900_0000237 Ga0395900_0000237_54927_56474 475
91 3300037471 Ga0395905_0004340 Ga0395905_0004340_10589_12136 475
92 3300037471 Ga0395905_0110582 Ga0395905_0110582_604_2109 475
93 3300038443 Ga0395901_0000028 Ga0395901_0000028_211220_212767 475
94 3300039437 Ga0436365_1014486 Ga0436365_1014486_786_2255 475
95 3300039450 Ga0436363_0583059 Ga0436363_0583059_564_2063 475
96 3300044694 Ga0466963_0121628 Ga0466963_0121628_16_1473 475
97 3300044735 Ga0466968_0000008 Ga0466968_0000008_15510_16967 475
98 3300046472 Ga0495580_0000015 Ga0495580_0000015_87457_88965 475
99 3300046472 Ga0495580_0066184 Ga0495580_0066184_674_2182 475
100 3300046679 Ga0495623_0027857 Ga0495623_0027857_1093_2601 475
101 3300047319 Ga0495674_0113399 Ga0495674_0113399_349_1857 475
102 3300048088 Ga0495602_0093860 Ga0495602_0093860_727_2235 475
103 3300048903 Ga0496100_0030678 Ga0496100_0030678_349_1857 475
104 3300048905 Ga0496102_0152479 Ga0496102_0152479_377_1885 475
105 3300048907 Ga0496104_0073510 Ga0496104_0073510_688_2196 475
106 3300048908 Ga0496105_0081626 Ga0496105_0081626_1029_2537 475
107 3300048912 Ga0496109_0142023 Ga0496109_0142023_508_2016 475
108 3300048914 Ga0496111_0126362 Ga0496111_0126362_99_1607 475
109 3300048915 Ga0496112_0160716 Ga0496112_0160716_688_2196 475
110 3300048917 Ga0496114_0097946 Ga0496114_0097946_542_2050 475
111 3300048918 Ga0496115_0038076 Ga0496115_0038076_338_1846 475
112 3300048929 Ga0496126_0000004 Ga0496126_0000004_44931_46487 475
113 iso_pu_bacteria 2738543011 2739236826 475
114 iso_pu_bacteria 2889300758 2889305719 475
115 iso_pu_bacteria 2939743619 2939743854 475
116 3300005436 Ga0070713_100018083 Ga0070713_1000180832 476
117 3300005445 Ga0070708_100010514 Ga0070708_1000105145 476
118 3300005468 Ga0070707_100034872 Ga0070707_1000348721 476
119 3300006028 Ga0070717_10057261 Ga0070717_100572612 476
120 3300006946 Ga0079104_1000011 Ga0079104_1000011226 476
121 3300007076 Ga0075435_100071981 Ga0075435_1000719812 476
122 3300025922 Ga0207646_10061668 Ga0207646_100616683 476
123 3300025935 Ga0207709_10000074 Ga0207709_10000074110 476
124 3300027111 Ga0209281_1000005 Ga0209281_1000005715 476
125 3300028666 Ga0265336_10002068 Ga0265336_100020686 476
126 3300028800 Ga0265338_10062666 Ga0265338_100626662 476
127 3300031239 Ga0265328_10038666 Ga0265328_100386661 476
128 3300031249 Ga0265339_10000394 Ga0265339_1000039415 476
129 3300032005 Ga0307411_10013600 Ga0307411_100136004 476
130 3300035724 Ga0373933_0017366 Ga0373933_0017366_1576_3078 476
131 3300036401 Ga0373937_0007865 Ga0373937_0007865_6551_8053 476
132 3300039438 Ga0436360_1089422 Ga0436360_1089422_70_1572 476
133 3300049521 Ga0501298_002738 Ga0501298_002738_276_1778 476
134 3300050510 nmdc:mga06r32_7979_c1 nmdc:mga06r32_7979_c1_4312_5943 476
135 3300053087 Ga0500643_000470 Ga0500643_000470_23870_25375 476
136 3300053139 Ga0500568_0008278 Ga0500568_0008278_3272_4777 476
137 iso_pu_bacteria 2721755523 2722884066 476
138 iso_pu_bacteria 2839138175 2839139069 476
139 3300039437 Ga0436365_1798095 Ga0436365_1798095_2424_3929 477
140 3300005841 Ga0068863_100034198 Ga0068863_1000341983 478
141 3300046459 Ga0495629_0025382 Ga0495629_0025382_2360_3814 478
142 3300046461 Ga0495641_0021405 Ga0495641_0021405_478_1932 478
143 3300046689 Ga0495613_0067931 Ga0495613_0067931_63_1517 478
144 3300047315 Ga0495581_0009473 Ga0495581_0009473_1359_2813 478
145 3300047673 Ga0495593_0010523 Ga0495593_0010523_1648_3102 478
146 3300048905 Ga0496102_0111484 Ga0496102_0111484_826_2280 478
147 3300048915 Ga0496112_0203058 Ga0496112_0203058_367_1821 478
148 3300005548 Ga0070665_100003894 Ga0070665_1000038948 479
149 3300005548 Ga0070665_100033979 Ga0070665_1000339796 479
150 3300005563 Ga0068855_100005007 Ga0068855_10000500712 479
151 3300009093 Ga0105240_10000791 Ga0105240_1000079147 479
152 3300009545 Ga0105237_10015576 Ga0105237_100155766 479
153 3300009551 Ga0105238_10146865 Ga0105238_101468652 479
154 3300013307 Ga0157372_10319993 Ga0157372_103199932 479
155 3300025913 Ga0207695_10237726 Ga0207695_102377262 479
156 3300025914 Ga0207671_10034503 Ga0207671_100345034 479
157 3300028379 Ga0268266_10007998 Ga0268266_100079983 479
158 3300028379 Ga0268266_10014539 Ga0268266_100145392 479
159 3300028379 Ga0268266_10034735 Ga0268266_100347352 479
160 3300048919 Ga0496116_0018198 Ga0496116_0018198_871_2391 479
161 3300048920 Ga0496117_0000095 Ga0496117_0000095_86555_88075 479
162 3300048921 Ga0496118_0000003 Ga0496118_0000003_47032_48552 479
163 3300048922 Ga0496119_0002402 Ga0496119_0002402_2196_3716 479
164 3300048922 Ga0496119_0024220 Ga0496119_0024220_813_2333 479
165 3300048923 Ga0496120_0001744 Ga0496120_0001744_20979_22499 479
166 3300048923 Ga0496120_0015664 Ga0496120_0015664_2832_4352 479
167 3300048928 Ga0496125_0021998 Ga0496125_0021998_3774_5294 479
168 3300053131 Ga0500652_001019 Ga0500652_001019_3649_5106 479
169 3300014497 Ga0182008_10005736 Ga0182008_100057363 480
170 3300015262 Ga0182007_10000520 Ga0182007_100005208 480
171 3300017792 Ga0163161_10000665 Ga0163161_1000066514 480
172 3300028800 Ga0265338_10005433 Ga0265338_1000543315 480
173 3300031240 Ga0265320_10026946 Ga0265320_100269461 480
174 3300031247 Ga0265340_10038712 Ga0265340_100387122 480
175 3300046474 Ga0495605_0000838 Ga0495605_0000838_14858_16378 480
176 3300048928 Ga0496125_0004954 Ga0496125_0004954_1246_2766 480
177 iso_pu_bacteria 2599185190 2599516457 480
178 iso_pu_bacteria 2599185290 2599895834 480
179 3300048920 Ga0496117_0000024 Ga0496117_0000024_277283_278812 482
180 3300048921 Ga0496118_0000014 Ga0496118_0000014_140250_141779 482
181 3300048923 Ga0496120_0027349 Ga0496120_0027349_1596_3125 482
182 3300048928 Ga0496125_0061301 Ga0496125_0061301_1302_2831 482
183 3300048929 Ga0496126_0126411 Ga0496126_0126411_363_1892 482
184 3300037068 Ga0373925_0129858 Ga0373925_0129858_13_1659 485
185 iso_pu_bacteria 2671180330 2672335389 486
186 iso_pu_bacteria 2671180330 2672335391 486
187 iso_pu_bacteria 2881644220 2881647516 486
188 iso_pu_bacteria 2919414237 2919419469 486
189 iso_pu_bacteria 3006978542 3006980874 486
190 3300003758 Ga0055532_1000024 Ga0055532_1000024206 490
191 3300025229 Ga0209147_100020 Ga0209147_100020167 490

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

30

498

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zum-assembly1.cif.gz_D human mitochondrial aldehyde dehydrogenase asian variant, aldh2*2, apo form 0.9825 4 480
5l13-assembly2.cif.gz_E structure of aldh2 in complex with 2p3 0.9819 4 480
2onm-assembly1.cif.gz_D human mitochondrial aldehyde dehydrogenase asian variant, aldh2*2, complexed with nad+ 0.9818 4 480
4qf6-assembly1.cif.gz_C structure of aldehyde dehydrogenase from bacillus cereus, e194s mutant 0.9818 3 479
4o6r-assembly1.cif.gz_D crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia 0.9817 1 481
ID Description Score Start End Superfamily
af_Q2FV10_3_257_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9925 5 251 3.40.605.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9919 253 443 3.40.309.10
3ed6A02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9902 252 445 3.40.309.10
af_Q2G1J0_261_449_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9902 254 442 3.40.309.10
af_Q9JLJ2_258_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9893 253 460 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A5R2N0D3-F1-model_v4 Aldehyde dehydrogenase family protein 0.9931 224 355 GO:0016620
AF-A0A5R2N764-F1-model_v4 Aldehyde dehydrogenase family protein 0.9903 317 452 GO:0016620
AF-A0A7J6SZ74-F1-model_v4 4-trimethylaminobutyraldehyde dehydrogenase 0.9898 211 371 GO:0016620
AF-S7SUG3-F1-model_v4 Aldehyde dehydrogenase (EC 1.2.1.3) 0.9895 112 479 GO:0004029
AF-A0A5C8X3K7-F1-model_v4 deleted 0.9892 83 439

Feature Viewer

pLDDT pTM Quality
94.39 0.93 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map