F294295

General Info

Members Datasets Scaffolds Average Seq Length
191 117 190 602

Family's Representative Sequence

Representative Sequence 3300034818|Ga0373950_0000015|Ga0373950_0000015_93121_95034
Length 637
Sequence VSGVRVPGGGARGGSTSHHEDAIGKALDGALLRRIFKYVWPYRTLIALSVALLPAAAAIELVQPWLLKKAIDEHIAVGRLPGLDTLGVLYLFALLAQSGAAFAQTYLTQLVGQKAMNDLRVQVHTHVLSLSAAFFDRTPLGRLMTRLTSDVEALTEMFASGLVSLVSDFVRLGIILVVIFRIDWKLALFSLATAPILYAIAASFRGWVRDAFREIRAKLARLNAFLQEHLSGIKVVQVFAREAKVDGEFDVINVEYRRANSRAIFADASLYSIVEAVGSIAVASLLWYGGGRIAKGTLTFGVVVMFIQYLEKFFAPIRDLSTKYTVMQQAMAAAERVFTLLDTKAADAPKIELAEAAPAGAAPLIELDHVTFGYREDRPVLSDVSLKIQRGETVAIVGATGAGKSTIIKLLPRLYDVSGGTVRLGGVDTRGLDRHALRRRVVVVSQDVFMFSGTLRDNIGLGDPTITDQRIVEAARRVGADRVISSRPEGLEANVAERGANFSAGERQLVAFARALARDPEILVLDEATASVDPETERVIERGIGELMRGRTSIVIAHRLSTIKRASRILVIQHGRIVEEGTHDELLARGGQYATLYRLQMTGHSHLDRGEGELRSSEPPPGGLGPSQGPRVDDAAE

Samples

Sample ID Description Type Environment
1 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
56 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
57 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
60 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
61 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
62 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
69 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
70 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
71 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
72 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
108 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
109 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
110 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 0.52
Rhizoplane 3.66
Rhizosphere 92.67
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10092846 3300005295 Bacteria 3708
2 Ga0070658_10003504 3300005327 Bacteria 12896
3 Ga0070690_100009010 3300005330 Bacteria 5769
4 Ga0070690_100026318 3300005330 Bacteria 3588
5 Ga0070689_100000003 3300005340 Bacteria 579260
6 Ga0070689_100046552 3300005340 Bacteria 3343
7 Ga0070689_100069114 3300005340 Bacteria 2755
8 Ga0070669_100008707 3300005353 Bacteria 7239
9 Ga0070673_100000967 3300005364 Bacteria 16299
10 Ga0070673_100022071 3300005364 Bacteria 4628
11 Ga0070710_10008232 3300005437 Bacteria 5075
12 Ga0070678_100045568 3300005456 Bacteria 3139
13 Ga0070706_100003905 3300005467 Bacteria 14538
14 Ga0070698_100000536 3300005471 Bacteria 40549
15 Ga0070679_100001915 3300005530 Bacteria 18668
16 Ga0070679_100061345 3300005530 Bacteria 3748
17 Ga0070684_100010655 3300005535 Bacteria 7291
18 Ga0068853_100024123 3300005539 Bacteria 5098
19 Ga0068853_100031979 3300005539 Bacteria 4454
20 Ga0070665_100048132 3300005548 Bacteria 4281
21 Ga0068855_100060772 3300005563 Bacteria 4417
22 Ga0068855_100075248 3300005563 Bacteria 3921
23 Ga0068859_100005649 3300005617 Bacteria 12737
24 Ga0068861_100029849 3300005719 Bacteria 3992
25 Ga0068860_100045092 3300005843 Bacteria 4203
26 Ga0081455_10052310 3300005937 Bacteria 3497
27 Ga0097620_100005649 3300006931 Bacteria 12737
28 Ga0105240_10002323 3300009093 Bacteria 30786
29 Ga0111539_10026678 3300009094 Bacteria 7060
30 Ga0105245_10000322 3300009098 Bacteria 45183
31 Ga0105237_10000014 3300009545 Bacteria 293492
32 Ga0105238_10002938 3300009551 Bacteria 17009
33 Ga0105238_10005403 3300009551 Bacteria 12626
34 Ga0157374_10086772 3300013296 Bacteria 2978
35 Ga0207645_10002236 3300025907 Bacteria 15416
36 Ga0207705_10010096 3300025909 Bacteria 6873
37 Ga0207684_10029059 3300025910 Bacteria 4709
38 Ga0207707_10124184 3300025912 Bacteria 2257
39 Ga0207695_10001689 3300025913 Bacteria 35468
40 Ga0207671_10000270 3300025914 Bacteria 77396
41 Ga0207660_10037428 3300025917 Bacteria 3381
42 Ga0207662_10027902 3300025918 Bacteria 3261
43 Ga0207652_10002326 3300025921 Bacteria 16100
44 Ga0207652_10079017 3300025921 Bacteria 2873
45 Ga0207652_10132030 3300025921 Bacteria 2228
46 Ga0207681_10019525 3300025923 Bacteria 4283
47 Ga0207694_10008353 3300025924 Bacteria 7826
48 Ga0207687_10000179 3300025927 Bacteria 41725
49 Ga0207706_10024365 3300025933 Bacteria 5425
50 Ga0207709_10024195 3300025935 Bacteria 3465
51 Ga0207670_10000006 3300025936 Bacteria 401723
52 Ga0207669_10001917 3300025937 Bacteria 8819
53 Ga0207704_10001677 3300025938 Bacteria 9915
54 Ga0207691_10008971 3300025940 Bacteria 9592
55 Ga0207691_10042523 3300025940 Bacteria 4189
56 Ga0207691_10121424 3300025940 Bacteria 2315
57 Ga0207651_10000181 3300025960 Bacteria 27386
58 Ga0207651_10113722 3300025960 Bacteria 2037
59 Ga0207712_10021346 3300025961 Bacteria 4251
60 Ga0207648_10022404 3300026089 Bacteria 5672
61 Ga0207676_10097325 3300026095 Bacteria 2431
62 Ga0207675_100001520 3300026118 Bacteria 23271
63 Ga0207675_100028619 3300026118 Bacteria 5189
64 Ga0207675_100052723 3300026118 Bacteria 3795
65 Ga0207698_10004841 3300026142 Bacteria 8245
66 Ga0265318_10000001 3300028577 Bacteria 500711
67 Ga0265318_10012279 3300028577 Bacteria 3652
68 Ga0307515_10026847 3300028794 Bacteria 9880
69 Ga0265338_10015974 3300028800 Bacteria 8208
70 Ga0265338_10023647 3300028800 Bacteria 6307
71 Ga0265330_10000002 3300031235 Bacteria 481237
72 Ga0265332_10000242 3300031238 Bacteria 43401
73 Ga0265332_10011390 3300031238 Bacteria 3953
74 Ga0265332_10018103 3300031238 Bacteria 3106
75 Ga0265328_10016750 3300031239 Bacteria 2846
76 Ga0265320_10000007 3300031240 Bacteria 331219
77 Ga0265320_10000645 3300031240 Bacteria 26614
78 Ga0265329_10015048 3300031242 Bacteria 2714
79 Ga0265340_10021346 3300031247 Bacteria 3322
80 Ga0265339_10000798 3300031249 Bacteria 24287
81 Ga0265339_10007658 3300031249 Bacteria 6954
82 Ga0265339_10009075 3300031249 Bacteria 6282
83 Ga0265339_10031628 3300031249 Bacteria 2989
84 Ga0265331_10000001 3300031250 Bacteria 798836
85 Ga0265316_10004352 3300031344 Bacteria 14116
86 Ga0265316_10064287 3300031344 Bacteria 2843
87 Ga0307509_10014947 3300031507 Bacteria 9091
88 Ga0265313_10004971 3300031595 Bacteria 9945
89 Ga0265314_10000006 3300031711 Bacteria 540431
90 Ga0265314_10002016 3300031711 Bacteria 21567
91 Ga0265314_10013418 3300031711 Bacteria 6618
92 Ga0265342_10000065 3300031712 Bacteria 112156
93 Ga0265342_10001778 3300031712 Bacteria 19641
94 Ga0373950_0000015 3300034818 Bacteria 281101
95 Ga0373950_0000023 3300034818 Bacteria 197381
96 Ga0373928_0001017 3300035084 Bacteria 5517
97 Ga0373943_0037520 3300035170 Bacteria 2326
98 Ga0373955_0015427 3300035172 Bacteria 3741
99 Ga0373955_0015632 3300035172 Bacteria 3721
100 Ga0373961_0000037 3300035241 Bacteria 79491
101 Ga0373933_0014334 3300035724 Bacteria 4407
102 Ga0373937_0000961 3300036401 Bacteria 24454
103 Ga0373937_0146292 3300036401 Bacteria 2212
104 Ga0395899_0029392 3300037312 Bacteria 4133
105 Ga0395900_0012239 3300037418 Bacteria 8771
106 Ga0395901_0019003 3300038443 Bacteria 7025
107 Ga0400483_019770 3300039062 Bacteria 17941
108 Ga0436365_0102979 3300039437 Bacteria 7236
109 Ga0436365_1605236 3300039437 Bacteria 2874
110 Ga0451577_0000132 3300042876 Bacteria 167282
111 Ga0451577_0002122 3300042876 Bacteria 24368
112 Ga0451577_0005145 3300042876 Bacteria 13457
113 Ga0451577_0007288 3300042876 Bacteria 10895
114 Ga0451577_0032305 3300042876 Bacteria 4717
115 Ga0451577_0041717 3300042876 Bacteria 4119
116 Ga0451577_0071008 3300042876 Bacteria 3105
117 Ga0451577_0094732 3300042876 Bacteria 2666
118 Ga0453683_0000001 3300044673 Bacteria 1384965
119 Ga0453683_0000009 3300044673 Bacteria 491115
120 Ga0453683_0000012 3300044673 Bacteria 376341
121 Ga0453683_0000597 3300044673 Bacteria 39847
122 Ga0453683_0000727 3300044673 Bacteria 33749
123 Ga0453683_0006328 3300044673 Bacteria 8133
124 Ga0453683_0013442 3300044673 Bacteria 5345
125 Ga0453683_0019629 3300044673 Bacteria 4326
126 Ga0453684_0000231 3300044712 Bacteria 241070
127 Ga0453684_0000319 3300044712 Bacteria 203440
128 Ga0453684_0001172 3300044712 Bacteria 81357
129 Ga0453684_0001201 3300044712 Bacteria 79902
130 Ga0453684_0003679 3300044712 Bacteria 34017
131 Ga0453684_0005184 3300044712 Bacteria 26217
132 Ga0453684_0005313 3300044712 Bacteria 25684
133 Ga0453684_0007896 3300044712 Bacteria 19315
134 Ga0453684_0009749 3300044712 Bacteria 16679
135 Ga0453684_0010939 3300044712 Bacteria 15346
136 Ga0453684_0019249 3300044712 Bacteria 10408
137 Ga0453684_0022969 3300044712 Bacteria 9222
138 Ga0453684_0034184 3300044712 Bacteria 7064
139 Ga0453684_0041024 3300044712 Bacteria 6268
140 Ga0453684_0082051 3300044712 Bacteria 4018
141 Ga0453684_0142429 3300044712 Bacteria 2861
142 Ga0453684_0180420 3300044712 Bacteria 2479
143 Ga0453684_0217764 3300044712 Bacteria 2214
144 Ga0451576_0000026 3300045051 Bacteria 427585
145 Ga0451576_0000824 3300045051 Bacteria 60438
146 Ga0451576_0005742 3300045051 Bacteria 15450
147 Ga0451576_0028412 3300045051 Bacteria 5992
148 Ga0451576_0044533 3300045051 Bacteria 4678
149 Ga0451576_0254799 3300045051 Unclassified 1834
150 Ga0495664_0007772 3300046477 Bacteria 5967
151 Ga0495630_0069547 3300046517 Bacteria 2649
152 Ga0495586_0022444 3300046535 Bacteria 3368
153 Ga0495634_0001534 3300046642 Bacteria 20376
154 Ga0495624_0066125 3300046690 Bacteria 2257
155 Ga0495674_0015606 3300047319 Bacteria 7093
156 Ga0495674_0015698 3300047319 Bacteria 7070
157 Ga0495684_0027586 3300047471 Bacteria 4360
158 Ga0496100_0053270 3300048903 Bacteria 2634
159 Ga0496104_0029747 3300048907 Bacteria 5069
160 Ga0496112_0042117 3300048915 Bacteria 4468
161 Ga0496114_0002850 3300048917 Bacteria 13259
162 Ga0496114_0004220 3300048917 Bacteria 11137
163 Ga0496114_0055431 3300048917 Bacteria 3306
164 Ga0496115_0009049 3300048918 Bacteria 7388
165 Ga0501034_0000327 3300049571 Bacteria 83596
166 Ga0501034_0069822 3300049571 Bacteria 3524
167 Ga0501036_0022487 3300049572 Bacteria 5304
168 Ga0501043_0000421 3300049579 Bacteria 38093
169 Ga0501046_0000451 3300049580 Bacteria 41351
170 Ga0501047_0000008 3300049581 Bacteria 441758
171 Ga0501047_0115798 3300049581 Bacteria 2562
172 Ga0501048_0004326 3300049582 Bacteria 10818
173 Ga0501067_0000030 3300049583 Bacteria 87924
174 Ga0501068_0009748 3300049584 Bacteria 5379
175 Ga0501070_0022912 3300049586 Bacteria 5227
176 Ga0501072_0000023 3300049588 Bacteria 149177
177 Ga0501073_0000362 3300049589 Bacteria 30528
178 Ga0501073_0016928 3300049589 Bacteria 5279
179 Ga0501216_001605 3300049660 Bacteria 3088
180 Ga0501227_000042 3300049665 Bacteria 18227
181 Ga0501230_000701 3300049667 Bacteria 3591
182 Ga0501225_0003834 3300049705 Bacteria 4516
183 Ga0501079_0004457 3300049741 Bacteria 10379
184 Ga0501080_0001071 3300049742 Bacteria 22514
185 Ga0501083_0003557 3300049744 Bacteria 10916
186 Ga0501083_0004899 3300049744 Bacteria 9469
187 nmdc:mga08y16_50504_c1 3300050511 Bacteria 4352
188 Ga0500566_0014856 3300053094 Bacteria 4573
189 Ga0501084_0000002 3300054114 Bacteria 273420
190 Ga0501082_0044732 3300060353 Bacteria 3818

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_50504_c1 nmdc:mga08y16_50504_c1_11_1663 497
2 3300009094 Ga0111539_10026678 Ga0111539_100266784 535
3 3300048917 Ga0496114_0002850 Ga0496114_0002850_2636_4540 540
4 3300048918 Ga0496115_0009049 Ga0496115_0009049_2210_4114 540
5 3300039437 Ga0436365_0102979 Ga0436365_0102979_454_2256 541
6 3300039062 Ga0400483_019770 Ga0400483_019770_12867_14885 551
7 3300005340 Ga0070689_100000003 Ga0070689_100000003287 552
8 3300025936 Ga0207670_10000006 Ga0207670_10000006282 552
9 3300028800 Ga0265338_10015974 Ga0265338_100159743 552
10 3300034818 Ga0373950_0000023 Ga0373950_0000023_176318_178081 554
11 3300035241 Ga0373961_0000037 Ga0373961_0000037_37147_39021 554
12 3300005937 Ga0081455_10052310 Ga0081455_100523102 555
13 3300005539 Ga0068853_100031979 Ga0068853_1000319792 557
14 3300013296 Ga0157374_10086772 Ga0157374_100867722 557
15 3300009098 Ga0105245_10000322 Ga0105245_100003224 558
16 3300025927 Ga0207687_10000179 Ga0207687_1000017927 558
17 3300026095 Ga0207676_10097325 Ga0207676_100973252 558
18 3300044712 Ga0453684_0041024 Ga0453684_0041024_4521_6233 558
19 3300005548 Ga0070665_100048132 Ga0070665_1000481322 559
20 3300031507 Ga0307509_10014947 Ga0307509_100149475 559
21 3300009093 Ga0105240_10002323 Ga0105240_100023238 561
22 3300026118 Ga0207675_100028619 Ga0207675_1000286192 561
23 3300028800 Ga0265338_10023647 Ga0265338_100236473 561
24 3300037312 Ga0395899_0029392 Ga0395899_0029392_719_2509 561
25 3300037418 Ga0395900_0012239 Ga0395900_0012239_3831_5621 561
26 3300038443 Ga0395901_0019003 Ga0395901_0019003_3739_5529 561
27 3300044712 Ga0453684_0217764 Ga0453684_0217764_366_2186 563
28 3300005340 Ga0070689_100069114 Ga0070689_1000691142 564
29 3300005563 Ga0068855_100060772 Ga0068855_1000607722 564
30 3300005617 Ga0068859_100005649 Ga0068859_1000056493 566
31 3300006931 Ga0097620_100005649 Ga0097620_1000056493 566
32 3300009551 Ga0105238_10005403 Ga0105238_100054036 566
33 3300025924 Ga0207694_10008353 Ga0207694_100083531 566
34 3300025961 Ga0207712_10021346 Ga0207712_100213462 568
35 3300042876 Ga0451577_0007288 Ga0451577_0007288_2537_4369 568
36 3300044712 Ga0453684_0005184 Ga0453684_0005184_8377_10209 568
37 3300048917 Ga0496114_0004220 Ga0496114_0004220_1865_3724 570
38 3300049571 Ga0501034_0069822 Ga0501034_0069822_801_2603 570
39 3300049581 Ga0501047_0115798 Ga0501047_0115798_633_2435 570
40 3300005719 Ga0068861_100029849 Ga0068861_1000298491 572
41 3300026118 Ga0207675_100052723 Ga0207675_1000527232 572
42 3300025921 Ga0207652_10079017 Ga0207652_100790172 573
43 3300035172 Ga0373955_0015632 Ga0373955_0015632_241_2091 573
44 3300036401 Ga0373937_0000961 Ga0373937_0000961_21946_23796 573
45 3300005330 Ga0070690_100009010 Ga0070690_1000090102 574
46 3300005353 Ga0070669_100008707 Ga0070669_1000087072 574
47 3300005456 Ga0070678_100045568 Ga0070678_1000455682 574
48 3300005539 Ga0068853_100024123 Ga0068853_1000241233 574
49 3300005843 Ga0068860_100045092 Ga0068860_1000450922 574
50 3300025907 Ga0207645_10002236 Ga0207645_100022368 574
51 3300025923 Ga0207681_10019525 Ga0207681_100195252 574
52 3300025935 Ga0207709_10024195 Ga0207709_100241955 574
53 3300025937 Ga0207669_10001917 Ga0207669_100019173 574
54 3300025938 Ga0207704_10001677 Ga0207704_100016772 574
55 3300025940 Ga0207691_10008971 Ga0207691_1000897110 574
56 3300026089 Ga0207648_10022404 Ga0207648_100224049 574
57 3300026118 Ga0207675_100001520 Ga0207675_10000152012 574
58 3300044712 Ga0453684_0000231 Ga0453684_0000231_19254_21047 574
59 3300049572 Ga0501036_0022487 Ga0501036_0022487_1180_3036 574
60 3300005330 Ga0070690_100026318 Ga0070690_1000263181 575
61 3300025933 Ga0207706_10024365 Ga0207706_100243653 576
62 3300028794 Ga0307515_10026847 Ga0307515_100268472 576
63 3300048907 Ga0496104_0029747 Ga0496104_0029747_3081_4865 576
64 iso_pu_bacteria 2513237351 2514591127 576
65 3300044712 Ga0453684_0001172 Ga0453684_0001172_8425_10254 577
66 3300005535 Ga0070684_100010655 Ga0070684_1000106552 578
67 3300031238 Ga0265332_10011390 Ga0265332_100113902 579
68 3300005364 Ga0070673_100022071 Ga0070673_1000220712 580
69 3300025940 Ga0207691_10042523 Ga0207691_100425232 580
70 3300025960 Ga0207651_10113722 Ga0207651_101137221 580
71 3300025913 Ga0207695_10001689 Ga0207695_1000168917 581
72 3300028577 Ga0265318_10000001 Ga0265318_10000001215 581
73 3300031235 Ga0265330_10000002 Ga0265330_10000002158 581
74 3300031238 Ga0265332_10000242 Ga0265332_100002422 581
75 3300031239 Ga0265328_10016750 Ga0265328_100167502 581
76 3300031240 Ga0265320_10000007 Ga0265320_10000007241 581
77 3300031240 Ga0265320_10000645 Ga0265320_100006453 581
78 3300031242 Ga0265329_10015048 Ga0265329_100150482 581
79 3300031249 Ga0265339_10007658 Ga0265339_100076587 581
80 3300031249 Ga0265339_10031628 Ga0265339_100316282 581
81 3300031250 Ga0265331_10000001 Ga0265331_10000001297 581
82 3300031344 Ga0265316_10004352 Ga0265316_100043524 581
83 3300031595 Ga0265313_10004971 Ga0265313_100049713 581
84 3300031711 Ga0265314_10000006 Ga0265314_10000006347 581
85 3300031711 Ga0265314_10002016 Ga0265314_1000201614 581
86 3300031712 Ga0265342_10001778 Ga0265342_100017784 581
87 3300035170 Ga0373943_0037520 Ga0373943_0037520_229_2046 581
88 3300048903 Ga0496100_0053270 Ga0496100_0053270_293_2197 581
89 3300048915 Ga0496112_0042117 Ga0496112_0042117_1443_3260 581
90 3300005364 Ga0070673_100000967 Ga0070673_1000009678 582
91 3300025940 Ga0207691_10121424 Ga0207691_101214242 582
92 3300025960 Ga0207651_10000181 Ga0207651_100001813 582
93 3300031249 Ga0265339_10009075 Ga0265339_100090756 582
94 3300046477 Ga0495664_0007772 Ga0495664_0007772_2064_3875 583
95 3300046517 Ga0495630_0069547 Ga0495630_0069547_636_2447 583
96 3300046535 Ga0495586_0022444 Ga0495586_0022444_83_1894 583
97 3300046642 Ga0495634_0001534 Ga0495634_0001534_4263_6074 583
98 3300047319 Ga0495674_0015698 Ga0495674_0015698_3381_5192 583
99 3300005437 Ga0070710_10008232 Ga0070710_100082324 584
100 3300005530 Ga0070679_100001915 Ga0070679_1000019153 584
101 3300025912 Ga0207707_10124184 Ga0207707_101241842 584
102 3300025918 Ga0207662_10027902 Ga0207662_100279022 584
103 3300031712 Ga0265342_10000065 Ga0265342_1000006543 584
104 3300044712 Ga0453684_0142429 Ga0453684_0142429_654_2450 584
105 3300053094 Ga0500566_0014856 Ga0500566_0014856_2570_4504 584
106 3300005530 Ga0070679_100061345 Ga0070679_1000613452 585
107 3300005563 Ga0068855_100075248 Ga0068855_1000752482 585
108 3300025921 Ga0207652_10132030 Ga0207652_101320302 585
109 3300031247 Ga0265340_10021346 Ga0265340_100213462 585
110 3300035724 Ga0373933_0014334 Ga0373933_0014334_803_2644 585
111 3300044712 Ga0453684_0010939 Ga0453684_0010939_11355_13145 585
112 3300046690 Ga0495624_0066125 Ga0495624_0066125_160_1962 585
113 3300047319 Ga0495674_0015606 Ga0495674_0015606_2750_4552 585
114 3300047471 Ga0495684_0027586 Ga0495684_0027586_293_2095 585
115 3300009545 Ga0105237_10000014 Ga0105237_10000014100 586
116 3300025914 Ga0207671_10000270 Ga0207671_1000027032 586
117 3300034818 Ga0373950_0000015 Ga0373950_0000015_93121_95034 586
118 3300044673 Ga0453683_0013442 Ga0453683_0013442_1433_3226 586
119 3300049583 Ga0501067_0000030 Ga0501067_0000030_53089_55002 586
120 3300049584 Ga0501068_0009748 Ga0501068_0009748_2878_4755 586
121 3300049589 Ga0501073_0000362 Ga0501073_0000362_14811_16724 586
122 3300049744 Ga0501083_0004899 Ga0501083_0004899_505_2382 586
123 3300009551 Ga0105238_10002938 Ga0105238_100029384 587
124 3300026142 Ga0207698_10004841 Ga0207698_100048412 587
125 3300031238 Ga0265332_10018103 Ga0265332_100181032 587
126 3300031249 Ga0265339_10000798 Ga0265339_1000079810 587
127 3300031344 Ga0265316_10064287 Ga0265316_100642872 587
128 3300031711 Ga0265314_10013418 Ga0265314_100134182 587
129 3300035172 Ga0373955_0015427 Ga0373955_0015427_320_2230 587
130 3300036401 Ga0373937_0146292 Ga0373937_0146292_51_1976 587
131 3300042876 Ga0451577_0002122 Ga0451577_0002122_16056_17846 587
132 3300045051 Ga0451576_0028412 Ga0451576_0028412_3154_4998 587
133 3300048917 Ga0496114_0055431 Ga0496114_0055431_1393_3237 587
134 3300049571 Ga0501034_0000327 Ga0501034_0000327_78971_80860 587
135 3300049579 Ga0501043_0000421 Ga0501043_0000421_27202_29091 587
136 3300049580 Ga0501046_0000451 Ga0501046_0000451_24917_26806 587
137 3300049581 Ga0501047_0000008 Ga0501047_0000008_250883_252772 587
138 3300049582 Ga0501048_0004326 Ga0501048_0004326_40_1920 587
139 3300049586 Ga0501070_0022912 Ga0501070_0022912_782_2671 587
140 3300049588 Ga0501072_0000023 Ga0501072_0000023_106822_108711 587
141 3300049589 Ga0501073_0016928 Ga0501073_0016928_654_2543 587
142 3300049741 Ga0501079_0004457 Ga0501079_0004457_953_2842 587
143 3300049742 Ga0501080_0001071 Ga0501080_0001071_6080_7969 587
144 3300049744 Ga0501083_0003557 Ga0501083_0003557_6080_7969 587
145 3300054114 Ga0501084_0000002 Ga0501084_0000002_188987_190876 587
146 3300060353 Ga0501082_0044732 Ga0501082_0044732_1276_3165 587
147 3300005327 Ga0070658_10003504 Ga0070658_100035049 588
148 3300005340 Ga0070689_100046552 Ga0070689_1000465522 588
149 3300005471 Ga0070698_100000536 Ga0070698_10000053620 588
150 3300025909 Ga0207705_10010096 Ga0207705_100100962 588
151 3300025917 Ga0207660_10037428 Ga0207660_100374282 588
152 3300025921 Ga0207652_10002326 Ga0207652_1000232614 588
153 3300039437 Ga0436365_1605236 Ga0436365_1605236_669_2537 588
154 3300042876 Ga0451577_0094732 Ga0451577_0094732_555_2345 588
155 3300044712 Ga0453684_0022969 Ga0453684_0022969_6259_8052 588
156 3300044712 Ga0453684_0082051 Ga0453684_0082051_1294_3084 588
157 3300044712 Ga0453684_0180420 Ga0453684_0180420_462_2252 588
158 3300045051 Ga0451576_0044533 Ga0451576_0044533_2212_4002 588
159 3300045051 Ga0451576_0254799 Ga0451576_0254799_21_1814 588
160 3300005467 Ga0070706_100003905 Ga0070706_1000039056 589
161 3300025910 Ga0207684_10029059 Ga0207684_100290592 589
162 3300042876 Ga0451577_0005145 Ga0451577_0005145_9783_11561 590
163 3300044712 Ga0453684_0001201 Ga0453684_0001201_2525_4303 590
164 3300042876 Ga0451577_0071008 Ga0451577_0071008_1017_2813 591
165 3300044673 Ga0453683_0000727 Ga0453683_0000727_8717_10573 591
166 3300044712 Ga0453684_0007896 Ga0453684_0007896_9015_10790 591
167 3300028577 Ga0265318_10012279 Ga0265318_100122792 592
168 3300035084 Ga0373928_0001017 Ga0373928_0001017_2417_4207 592
169 3300042876 Ga0451577_0032305 Ga0451577_0032305_806_2611 592
170 3300044673 Ga0453683_0000009 Ga0453683_0000009_249501_251324 592
171 3300044673 Ga0453683_0000597 Ga0453683_0000597_6661_8460 592
172 3300044712 Ga0453684_0003679 Ga0453684_0003679_29026_30849 592
173 3300044673 Ga0453683_0019629 Ga0453683_0019629_2200_3981 593
174 3300044712 Ga0453684_0009749 Ga0453684_0009749_1989_3821 593
175 3300044712 Ga0453684_0019249 Ga0453684_0019249_8116_9981 593
176 3300045051 Ga0451576_0000824 Ga0451576_0000824_39803_41623 593
177 3300044673 Ga0453683_0000001 Ga0453683_0000001_242194_243987 594
178 3300045051 Ga0451576_0005742 Ga0451576_0005742_2534_4327 594
179 3300042876 Ga0451577_0041717 Ga0451577_0041717_1681_3468 595
180 3300044673 Ga0453683_0006328 Ga0453683_0006328_5160_6980 595
181 3300044712 Ga0453684_0034184 Ga0453684_0034184_3527_5341 595
182 3300049660 Ga0501216_001605 Ga0501216_001605_224_2056 595
183 3300049665 Ga0501227_000042 Ga0501227_000042_13658_15490 595
184 3300049667 Ga0501230_000701 Ga0501230_000701_508_2340 595
185 3300049705 Ga0501225_0003834 Ga0501225_0003834_2178_4010 595
186 3300042876 Ga0451577_0000132 Ga0451577_0000132_9053_10885 600
187 3300044712 Ga0453684_0000319 Ga0453684_0000319_108250_110082 600
188 3300044673 Ga0453683_0000012 Ga0453683_0000012_119445_121283 607
189 3300044712 Ga0453684_0005313 Ga0453684_0005313_1893_3731 607
190 3300045051 Ga0451576_0000026 Ga0451576_0000026_94834_96672 607
191 3300005295 Ga0065707_10092846 Ga0065707_100928463 618

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

46

317

0.98

PF00005

ABC_tran

ABC transporter

381

530

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q7l-assembly1.cif.gz_A structure of nbd288 of tm287/288 0.9532 381 616
4q7l-assembly2.cif.gz_B structure of nbd288 of tm287/288 0.9492 381 616
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.949 381 616
2ghi-assembly4.cif.gz_D crystal structure of plasmodium yoelii multidrug resistance protein 2 0.938 381 615
4q7m-assembly1.cif.gz_B structure of nbd288-avi of tm287/288 0.9353 381 616
ID Description Score Start End Superfamily
af_A0A1D6P1I8_181_285_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9632 381 454 3.40.50.300
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9569 408 615 1.20.1560.10
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9557 400 618 3.40.50.300
4q7lB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9492 381 616 3.40.50.300
af_Q2FVJ2_326_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9463 378 617 3.40.50.300
ID Description Score Start End GO Terms
AF-A6QVC6-F1-model_v4 ABC multidrug transporter MDR2 0.9376 448 618 GO:0005524
GO:0005743
GO:0015421
GO:0016887
GO:0090374
AF-A0A1J3F1Q8-F1-model_v4 ABC transporter C family member 11 0.9214 444 538 GO:0005524
GO:0016020
GO:0016887
GO:0042626
AF-A0A6N9CNE4-F1-model_v4 deleted 0.9165 20 331
AF-A0A2E4RDI0-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9161 8 206 GO:0005524
GO:0005886
GO:0015421
AF-A0A7R9IWN2-F1-model_v4 (California timema) hypothetical protein 0.9148 377 549 GO:0005524
GO:0016020
GO:0016887
GO:0042626

Feature Viewer

pLDDT pTM Quality
83.29 0.7 High
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Predicted Structure (AlphaFold2)

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