F294268

General Info

Members Datasets Scaffolds Average Seq Length
191 101 382 440

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10036443|Ga0307405_100364431
Length 505
Sequence MRATRNHPAVDAGCASGQAHVSPSSASGPHPAHWILMQRTPAPGAVSAVRPGSLADEAGIEAGDAIVSVDGRILRDVVDFQFNAAANEVQVAIKKANGLDDLVLFEKEIDEDLGIEFERATWDEVTLCNNNCFFCFLKGLPKGMRKTLYMKDDDYRLSFLHGNFVTLTNLEDADWERLEEQRLSPLNVSVHATELGLRRHMLSNPTAPDILEQLRRLGDLGLRAHTQIVLCPGVNDGEHLARSIRDLGELYPTVQTISVVPVGASPKLEDWSLNRDGIPLVRPDQEYAREIVAILAPFQKEFRKRFGATVVQCSDEYYVTADVPIPGRAAYDGFPQYENGIGMVRTMLDDWSRVKARVSPGLGAGRRIIIGTANLIAPLLSRVASEVAEVTGASIEVRGVTNTVFGERVNVSGLLTGQDYVEQLALGASPDLYILPRPSLDYFGEKFLDSMTVEEAEARLGAPLAFAALWSDVVEVLRHGPARPHRNSATNGAMWAEPEPEAVPA

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
61 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
62 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
63 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
64 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
65 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
97 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.52
Rhizosphere 96.86
Stem 0
Stem Tuber 0
Unclassified 2.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10036443 3300031731 Bacteria 2948
2 Ga0070658_10001426 3300005327 Bacteria 20399
3 Ga0070658_10025645 3300005327 Bacteria 4725
4 Ga0070680_100013634 3300005336 Bacteria 6336
5 Ga0070688_100005740 3300005365 Bacteria 6559
6 Ga0070711_100023550 3300005439 Bacteria 4007
7 Ga0070711_100104457 3300005439 Bacteria 2067
8 Ga0070694_100214224 3300005444 Bacteria 1442
9 Ga0070708_100059312 3300005445 Bacteria 3412
10 Ga0070663_100085770 3300005455 Bacteria 2324
11 Ga0070685_10015133 3300005466 Bacteria 4093
12 Ga0070695_100042790 3300005545 Bacteria 2877
13 Ga0070704_100102547 3300005549 Unclassified 2159
14 Ga0068855_100051650 3300005563 Unclassified 4842
15 Ga0068864_100009194 3300005618 Bacteria 8148
16 Ga0068863_100170054 3300005841 Bacteria 2090
17 Ga0068858_100002955 3300005842 Bacteria 17077
18 Ga0068860_100020398 3300005843 Bacteria 6420
19 Ga0075428_100000922 3300006844 Bacteria 31068
20 Ga0075428_100022753 3300006844 Bacteria 6934
21 Ga0075430_100000454 3300006846 Bacteria 30595
22 Ga0075430_100013527 3300006846 Bacteria 6957
23 Ga0075431_100005041 3300006847 Bacteria 12993
24 Ga0075431_100005519 3300006847 Bacteria 12486
25 Ga0075431_100054751 3300006847 Bacteria 4114
26 Ga0075431_100078191 3300006847 Bacteria 3415
27 Ga0075433_10000277 3300006852 Bacteria 30315
28 Ga0075433_10051773 3300006852 Bacteria 3577
29 Ga0075433_10131813 3300006852 Bacteria 2220
30 Ga0075433_10222588 3300006852 Bacteria 1676
31 Ga0075434_100001069 3300006871 Bacteria 22396
32 Ga0075434_100027416 3300006871 Bacteria 5593
33 Ga0075434_100050793 3300006871 Bacteria 4119
34 Ga0075429_100003921 3300006880 Bacteria 12714
35 Ga0075429_100006917 3300006880 Bacteria 9854
36 Ga0075435_100002721 3300007076 Bacteria 11801
37 Ga0075435_100002791 3300007076 Bacteria 11670
38 Ga0099794_10042319 3300007265 Bacteria 2171
39 Ga0111539_10001998 3300009094 Bacteria 27222
40 Ga0105245_10096877 3300009098 Bacteria 2723
41 Ga0114129_10002483 3300009147 Bacteria 25613
42 Ga0114129_10008832 3300009147 Bacteria 14377
43 Ga0114129_10059520 3300009147 Bacteria 5340
44 Ga0114129_10132536 3300009147 Bacteria 3422
45 Ga0114129_10271485 3300009147 Bacteria 2269
46 Ga0105243_10036232 3300009148 Bacteria 3828
47 Ga0105241_10063517 3300009174 Bacteria 2849
48 Ga0105248_10021457 3300009177 Bacteria 7153
49 Ga0105237_10000741 3300009545 Bacteria 45032
50 Ga0105239_10040813 3300010375 Bacteria 5085
51 Ga0105239_10041016 3300010375 Bacteria 5073
52 Ga0163163_10034738 3300014325 Bacteria 4886
53 Ga0157380_10275744 3300014326 Bacteria 1536
54 Ga0157379_10001341 3300014968 Bacteria 20112
55 Ga0213875_10000161 3300021388 Bacteria 70921
56 Ga0213875_10001602 3300021388 Bacteria 14321
57 Ga0207705_10001254 3300025909 Bacteria 20406
58 Ga0207705_10008844 3300025909 Bacteria 7340
59 Ga0207684_10021405 3300025910 Bacteria 5520
60 Ga0207684_10021998 3300025910 Bacteria 5446
61 Ga0207695_10095739 3300025913 Bacteria 2972
62 Ga0207671_10000627 3300025914 Bacteria 46460
63 Ga0207663_10050186 3300025916 Bacteria 2592
64 Ga0207652_10066560 3300025921 Bacteria 3123
65 Ga0207681_10009925 3300025923 Bacteria 5827
66 Ga0207687_10150651 3300025927 Unclassified 1774
67 Ga0207711_10014072 3300025941 Bacteria 6646
68 Ga0207667_10018647 3300025949 Bacteria 7775
69 Ga0207703_10025816 3300026035 Bacteria 4623
70 Ga0307408_100009500 3300031548 Bacteria 6417
71 Ga0307416_100002271 3300032002 Bacteria 10951
72 Ga0307411_10024075 3300032005 Bacteria 3622
73 Ga0307415_100115233 3300032126 Bacteria 2003
74 Ga0395899_0006652 3300037312 Bacteria 8958
75 Ga0395899_0067026 3300037312 Bacteria 2635
76 Ga0395900_0011200 3300037418 Bacteria 9172
77 Ga0395900_0078121 3300037418 Bacteria 3401
78 Ga0395898_0014380 3300037466 Bacteria 8134
79 Ga0436364_0024368 3300037853 Bacteria 45617
80 Ga0436364_0531667 3300037853 Bacteria 70971
81 Ga0395901_0008899 3300038443 Bacteria 10167
82 Ga0436365_1535653 3300039437 Bacteria 1557
83 Ga0451577_0029184 3300042876 Bacteria 4985
84 Ga0451577_0063004 3300042876 Bacteria 3306
85 Ga0453684_0094933 3300044712 Bacteria 3667
86 Ga0495582_0000363 3300046473 Bacteria 24747
87 Ga0495659_0000493 3300046664 Bacteria 14557
88 Ga0495658_0007518 3300046683 Bacteria 5396
89 Ga0495669_0045217 3300046684 Bacteria 1963
90 Ga0496102_0133889 3300048905 Bacteria 2322
91 Ga0501031_0016160 3300049568 Bacteria 4848
92 Ga0501033_0045874 3300049570 Bacteria 3251
93 Ga0501036_0005207 3300049572 Bacteria 10513
94 Ga0501036_0054752 3300049572 Bacteria 3380
95 Ga0501036_0083522 3300049572 Bacteria 2700
96 Ga0501038_0013692 3300049574 Bacteria 7393
97 Ga0501039_0002996 3300049575 Bacteria 12630
98 Ga0501040_0002591 3300049576 Bacteria 11661
99 Ga0501040_0047219 3300049576 Bacteria 2941
100 Ga0501040_0048285 3300049576 Bacteria 2909
101 Ga0501041_0085877 3300049577 Bacteria 1941
102 Ga0501041_0090175 3300049577 Unclassified 1893
103 Ga0501041_0153606 3300049577 Bacteria 1438
104 Ga0501042_0006193 3300049578 Bacteria 7764
105 Ga0501042_0057171 3300049578 Bacteria 2784
106 Ga0501042_0109207 3300049578 Bacteria 1992
107 Ga0501043_0039631 3300049579 Bacteria 3703
108 Ga0501043_0054198 3300049579 Bacteria 3149
109 Ga0501046_0008930 3300049580 Bacteria 8704
110 Ga0501068_0016062 3300049584 Bacteria 4313
111 Ga0501070_0108230 3300049586 Bacteria 2297
112 Ga0501071_0146496 3300049587 Bacteria 1760
113 Ga0501072_0003873 3300049588 Bacteria 11315
114 Ga0501072_0009232 3300049588 Bacteria 7495
115 Ga0501072_0025239 3300049588 Bacteria 4629
116 Ga0501072_0043885 3300049588 Bacteria 3515
117 Ga0501073_0034119 3300049589 Bacteria 3623
118 Ga0501074_0030357 3300049590 Bacteria 3916
119 Ga0501074_0083180 3300049590 Bacteria 2295
120 Ga0501075_0001967 3300049591 Bacteria 13556
121 Ga0501075_0003546 3300049591 Bacteria 10445
122 Ga0501076_0000492 3300049592 Bacteria 24925
123 Ga0501076_0029800 3300049592 Bacteria 4246
124 Ga0501076_0065498 3300049592 Bacteria 2898
125 Ga0501076_0071825 3300049592 Bacteria 2769
126 Ga0501077_0009713 3300049593 Bacteria 5981
127 Ga0501077_0022926 3300049593 Bacteria 3957
128 Ga0501079_0005433 3300049741 Bacteria 9498
129 Ga0501079_0027523 3300049741 Bacteria 4360
130 Ga0501080_0009892 3300049742 Bacteria 8712
131 Ga0501081_0002057 3300049743 Bacteria 12550
132 Ga0501081_0003720 3300049743 Bacteria 9775
133 Ga0501081_0016531 3300049743 Bacteria 4877
134 Ga0501081_0053347 3300049743 Bacteria 2791
135 Ga0501081_0083801 3300049743 Bacteria 2235
136 Ga0501081_0122793 3300049743 Bacteria 1851
137 Ga0501035_0085659 3300049822 Bacteria 2777
138 Ga0501045_0005203 3300049824 Bacteria 8997
139 Ga0501045_0043660 3300049824 Bacteria 3265
140 Ga0501045_0061756 3300049824 Bacteria 2749
141 Ga0501045_0067325 3300049824 Bacteria 2630
142 nmdc:mga05p37_10288_c1 3300050507 Bacteria 11109
143 nmdc:mga05p37_110957_c1 3300050507 Bacteria 3373
144 nmdc:mga05p37_164573_c1 3300050507 Bacteria 2708
145 nmdc:mga05p37_2401_c1 3300050507 Bacteria 21794
146 nmdc:mga05p37_39359_c1 3300050507 Bacteria 3154
147 nmdc:mga05p37_552_c1 3300050507 Bacteria 41127
148 nmdc:mga09592_1292_c1 3300050508 Bacteria 20106
149 nmdc:mga09592_186776_c1 3300050508 Bacteria 1793
150 nmdc:mga0qj67_10934_c1 3300050509 Bacteria 6792
151 nmdc:mga0qj67_192_c1 3300050509 Bacteria 41685
152 nmdc:mga06r32_104_c1 3300050510 Bacteria 58912
153 nmdc:mga06r32_124332_c1 3300050510 Bacteria 2547
154 nmdc:mga06r32_2144_c1 3300050510 Bacteria 17639
155 nmdc:mga06r32_426722_c1 3300050510 Bacteria 1307
156 nmdc:mga06r32_43014_c1 3300050510 Bacteria 4297
157 nmdc:mga06r32_63132_c1 3300050510 Bacteria 3569
158 nmdc:mga08y16_21190_c1 3300050511 Bacteria 6863
159 nmdc:mga08y16_367859_c1 3300050511 Bacteria 1475
160 nmdc:mga0n895_112170_c1 3300050512 Bacteria 2744
161 nmdc:mga0n895_16038_c1 3300050512 Bacteria 6862
162 nmdc:mga0n895_25302_c1 3300050512 Bacteria 5607
163 nmdc:mga0n895_45341_c1 3300050512 Bacteria 4291
164 nmdc:mga0n895_792_c1 3300050512 Bacteria 22557
165 nmdc:mga0n895_8230_c1 3300050512 Bacteria 9017
166 nmdc:mga0rr50_1427_c1 3300050513 Bacteria 13124
167 nmdc:mga0rr50_8852_c1 3300050513 Bacteria 6286
168 nmdc:mga0a205_108116_c1 3300050515 Bacteria 2679
169 nmdc:mga0a205_142335_c1 3300050515 Bacteria 2298
170 nmdc:mga0a205_229313_c1 3300050515 Bacteria 1741
171 nmdc:mga0a205_34158_c1 3300050515 Bacteria 4879
172 nmdc:mga0a205_431_c1 3300050515 Bacteria 32283
173 nmdc:mga0a205_551_c1 3300050515 Bacteria 29661
174 nmdc:mga0a205_7735_c1 3300050515 Bacteria 9757
175 Ga0495601_0064445 3300053077 Bacteria 2330
176 Ga0495619_0010144 3300053085 Bacteria 5933
177 Ga0501084_0014166 3300054114 Bacteria 6602
178 Ga0501084_0018774 3300054114 Bacteria 5757
179 Ga0501084_0031767 3300054114 Bacteria 4415
180 Ga0501082_0013064 3300060353 Bacteria 7137
181 Ga0501082_0029596 3300060353 Bacteria 4718
182 Ga0501082_0056164 3300060353 Bacteria 3391
183 Ga0501082_0107244 3300060353 Bacteria 2417
184 Ga0501082_0172125 3300060353 Bacteria 1883
185 Ga0501082_0172675 3300060353 Bacteria 1879
186 Ga0501082_0263858 3300060353 Bacteria 1498
187 Ga0530510_0001631 3300061734 Bacteria 15150
188 Ga0530510_0004121 3300061734 Bacteria 10036
189 Ga0530510_0008962 3300061734 Bacteria 7010
190 Ga0530510_0009935 3300061734 Bacteria 6677
191 Ga0530510_0027679 3300061734 Bacteria 4062
192 Ga0307405_10036443
193 Ga0070658_10001426
194 Ga0070658_10025645
195 Ga0070680_100013634
196 Ga0070688_100005740
197 Ga0070711_100023550
198 Ga0070711_100104457
199 Ga0070694_100214224
200 Ga0070708_100059312
201 Ga0070663_100085770
202 Ga0070685_10015133
203 Ga0070695_100042790
204 Ga0070704_100102547
205 Ga0068855_100051650
206 Ga0068864_100009194
207 Ga0068863_100170054
208 Ga0068858_100002955
209 Ga0068860_100020398
210 Ga0075428_100000922
211 Ga0075428_100022753
212 Ga0075430_100000454
213 Ga0075430_100013527
214 Ga0075431_100005041
215 Ga0075431_100005519
216 Ga0075431_100054751
217 Ga0075431_100078191
218 Ga0075433_10000277
219 Ga0075433_10051773
220 Ga0075433_10131813
221 Ga0075433_10222588
222 Ga0075434_100001069
223 Ga0075434_100027416
224 Ga0075434_100050793
225 Ga0075429_100003921
226 Ga0075429_100006917
227 Ga0075435_100002721
228 Ga0075435_100002791
229 Ga0099794_10042319
230 Ga0111539_10001998
231 Ga0105245_10096877
232 Ga0114129_10002483
233 Ga0114129_10008832
234 Ga0114129_10059520
235 Ga0114129_10132536
236 Ga0114129_10271485
237 Ga0105243_10036232
238 Ga0105241_10063517
239 Ga0105248_10021457
240 Ga0105237_10000741
241 Ga0105239_10040813
242 Ga0105239_10041016
243 Ga0163163_10034738
244 Ga0157380_10275744
245 Ga0157379_10001341
246 Ga0213875_10000161
247 Ga0213875_10001602
248 Ga0207705_10001254
249 Ga0207705_10008844
250 Ga0207684_10021405
251 Ga0207684_10021998
252 Ga0207695_10095739
253 Ga0207671_10000627
254 Ga0207663_10050186
255 Ga0207652_10066560
256 Ga0207681_10009925
257 Ga0207687_10150651
258 Ga0207711_10014072
259 Ga0207667_10018647
260 Ga0207703_10025816
261 Ga0307408_100009500
262 Ga0307416_100002271
263 Ga0307411_10024075
264 Ga0307415_100115233
265 Ga0395899_0006652
266 Ga0395899_0067026
267 Ga0395900_0011200
268 Ga0395900_0078121
269 Ga0395898_0014380
270 Ga0436364_0024368
271 Ga0436364_0531667
272 Ga0395901_0008899
273 Ga0436365_1535653
274 Ga0451577_0029184
275 Ga0451577_0063004
276 Ga0453684_0094933
277 Ga0495582_0000363
278 Ga0495659_0000493
279 Ga0495658_0007518
280 Ga0495669_0045217
281 Ga0496102_0133889
282 Ga0501031_0016160
283 Ga0501033_0045874
284 Ga0501036_0005207
285 Ga0501036_0054752
286 Ga0501036_0083522
287 Ga0501038_0013692
288 Ga0501039_0002996
289 Ga0501040_0002591
290 Ga0501040_0047219
291 Ga0501040_0048285
292 Ga0501041_0085877
293 Ga0501041_0090175
294 Ga0501041_0153606
295 Ga0501042_0006193
296 Ga0501042_0057171
297 Ga0501042_0109207
298 Ga0501043_0039631
299 Ga0501043_0054198
300 Ga0501046_0008930
301 Ga0501068_0016062
302 Ga0501070_0108230
303 Ga0501071_0146496
304 Ga0501072_0003873
305 Ga0501072_0009232
306 Ga0501072_0025239
307 Ga0501072_0043885
308 Ga0501073_0034119
309 Ga0501074_0030357
310 Ga0501074_0083180
311 Ga0501075_0001967
312 Ga0501075_0003546
313 Ga0501076_0000492
314 Ga0501076_0029800
315 Ga0501076_0065498
316 Ga0501076_0071825
317 Ga0501077_0009713
318 Ga0501077_0022926
319 Ga0501079_0005433
320 Ga0501079_0027523
321 Ga0501080_0009892
322 Ga0501081_0002057
323 Ga0501081_0003720
324 Ga0501081_0016531
325 Ga0501081_0053347
326 Ga0501081_0083801
327 Ga0501081_0122793
328 Ga0501035_0085659
329 Ga0501045_0005203
330 Ga0501045_0043660
331 Ga0501045_0061756
332 Ga0501045_0067325
333 nmdc:mga05p37_10288_c1
334 nmdc:mga05p37_110957_c1
335 nmdc:mga05p37_164573_c1
336 nmdc:mga05p37_2401_c1
337 nmdc:mga05p37_39359_c1
338 nmdc:mga05p37_552_c1
339 nmdc:mga09592_1292_c1
340 nmdc:mga09592_186776_c1
341 nmdc:mga0qj67_10934_c1
342 nmdc:mga0qj67_192_c1
343 nmdc:mga06r32_104_c1
344 nmdc:mga06r32_124332_c1
345 nmdc:mga06r32_2144_c1
346 nmdc:mga06r32_426722_c1
347 nmdc:mga06r32_43014_c1
348 nmdc:mga06r32_63132_c1
349 nmdc:mga08y16_21190_c1
350 nmdc:mga08y16_367859_c1
351 nmdc:mga0n895_112170_c1
352 nmdc:mga0n895_16038_c1
353 nmdc:mga0n895_25302_c1
354 nmdc:mga0n895_45341_c1
355 nmdc:mga0n895_792_c1
356 nmdc:mga0n895_8230_c1
357 nmdc:mga0rr50_1427_c1
358 nmdc:mga0rr50_8852_c1
359 nmdc:mga0a205_108116_c1
360 nmdc:mga0a205_142335_c1
361 nmdc:mga0a205_229313_c1
362 nmdc:mga0a205_34158_c1
363 nmdc:mga0a205_431_c1
364 nmdc:mga0a205_551_c1
365 nmdc:mga0a205_7735_c1
366 Ga0495601_0064445
367 Ga0495619_0010144
368 Ga0501084_0014166
369 Ga0501084_0018774
370 Ga0501084_0031767
371 Ga0501082_0013064
372 Ga0501082_0029596
373 Ga0501082_0056164
374 Ga0501082_0107244
375 Ga0501082_0172125
376 Ga0501082_0172675
377 Ga0501082_0263858
378 Ga0530510_0001631
379 Ga0530510_0004121
380 Ga0530510_0008962
381 Ga0530510_0009935
382 Ga0530510_0027679

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19238

Radical_SAM_2

Radical SAM-like domain

107

257

0.99

PF04459

DUF512

Protein of unknown function (DUF512)

260

468

0.93

PF17820

PDZ_6

PDZ domain

45

94

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pzd-assembly1.cif.gz_B crystal structure of the htra2/omi pdz domain bound to a phage-derived ligand (wtmfwv) 0.921 11 73
6icc-assembly1.cif.gz_A the nz-1 fab complexed with the pdz tandem fragment of a. aeolicus s2p homolog with the pa12 tag inserted between the residues 181 and 186 0.9166 13 85
5wyn-assembly1.cif.gz_A htra2 pathogenic mutant 0.9156 13 73
4a8d-assembly1.cif.gz_A degp dodecamer with bound omp 0.9151 13 73
8e2k-assembly1.cif.gz_X cryo-em structure of birc6/htra2-s306a 0.914 11 73
ID Description Score Start End Superfamily
af_F1QL69_2_87_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.962 11 73 2.30.42.10
af_P83105_375_476_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9602 13 73 2.30.42.10
af_Q9VFJ3_320_421_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9529 13 73 2.30.42.10
2p3wB01 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9285 15 73 2.30.42.10
3wkmB02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9257 13 83 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A7C7PUQ8-F1-model_v4 PDZ domain-containing protein 0.971 13 79
AF-A0A3D4ZLY9-F1-model_v4 Radical SAM protein 0.966 11 75
AF-A0A3N5HPH7-F1-model_v4 PDZ domain-containing protein 0.9593 11 83
AF-A0A4V2B1A0-F1-model_v4 PDZ domain-containing protein 0.959 13 74
AF-A0A7V6DPE9-F1-model_v4 PDZ domain-containing protein 0.9537 13 77

Map