F293839

General Info

Members Datasets Scaffolds Average Seq Length
191 148 382 242

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100000015|Ga0075428_10000001560
Length 280
Sequence VVNSPNLDKLRIKIFADGADLESIRRLARDPRTRGFTTNPTLMRAAGIKDYKAFAHEVLKIVTDRPVSFEVLADDFSLMERQAREIASWGPNVYVKVPVSNTKGKGAGRLITTLSKSNIKLNVTAVMTLDQVASVRDALAPSVPAIVSVFAGRIADTGIDPVPHMKQALQLLAALPQVELLWASPRELLNIFQADAIGCHIITATTDVLKKLSLVGKDLLQFSRETVEMFYRDAEAAAYEILPVPQLVTSRQARLARPLGPAGTTGVLRAVTRPRDIVRP

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
77 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
147 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
148 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.95
Metatranscriptomes 0
Isolates 1.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.66
Nodule 0
Rhizoplane 8.9
Rhizosphere 79.06
Stem 0
Stem Tuber 0
Unclassified 7.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100000015 3300006844 Bacteria 164556
2 rootH1_10067607 3300003316 Bacteria 12785
3 rootL2_10189109 3300003322 Bacteria 5494
4 rootH1_10299126 3300003323 Unclassified 1592
5 Ga0070675_100330050 3300005354 Bacteria 1349
6 Ga0070671_100574758 3300005355 Bacteria 973
7 Ga0070659_100205503 3300005366 Bacteria 1622
8 Ga0070709_10291020 3300005434 Bacteria 1190
9 Ga0070714_100000912 3300005435 Bacteria 20923
10 Ga0070663_100481746 3300005455 Unclassified 1027
11 Ga0070678_100007793 3300005456 Bacteria 6371
12 Ga0070678_100174946 3300005456 Bacteria 1752
13 Ga0070685_10074215 3300005466 Bacteria 2023
14 Ga0070707_100074089 3300005468 Bacteria 3283
15 Ga0070698_100002681 3300005471 Bacteria 19613
16 Ga0070698_100043946 3300005471 Bacteria 4578
17 Ga0070698_100070547 3300005471 Bacteria 3506
18 Ga0070699_100040577 3300005518 Bacteria 4030
19 Ga0070699_100110833 3300005518 Bacteria 2409
20 Ga0070679_100858653 3300005530 Bacteria 851
21 Ga0070684_100495151 3300005535 Bacteria 1132
22 Ga0070697_100010981 3300005536 Bacteria 7075
23 Ga0068856_100001793 3300005614 Bacteria 22418
24 Ga0070702_100100760 3300005615 Bacteria 1771
25 Ga0068852_100386470 3300005616 Bacteria 1374
26 Ga0068864_100317235 3300005618 Bacteria 1463
27 Ga0081455_10067541 3300005937 Bacteria 2978
28 Ga0081455_10379078 3300005937 Bacteria 989
29 Ga0075365_10020474 3300006038 Bacteria 4102
30 Ga0075363_100306568 3300006048 Unclassified 922
31 Ga0075364_10026248 3300006051 Bacteria 3714
32 Ga0097621_100072956 3300006237 Unclassified 2840
33 Ga0068871_100110936 3300006358 Bacteria 2307
34 Ga0075428_100304875 3300006844 Bacteria 1712
35 Ga0075430_100230769 3300006846 Bacteria 1535
36 Ga0075431_100108183 3300006847 Bacteria 2869
37 Ga0075431_100130656 3300006847 Bacteria 2590
38 Ga0075431_100162491 3300006847 Unclassified 2296
39 Ga0068865_100200144 3300006881 Bacteria 1550
40 Ga0111539_10000002 3300009094 Bacteria 983359
41 Ga0111539_10034742 3300009094 Bacteria 6108
42 Ga0111539_10469427 3300009094 Bacteria 1465
43 Ga0105245_10072275 3300009098 Bacteria 3133
44 Ga0114129_10169922 3300009147 Bacteria 2973
45 Ga0105241_10265718 3300009174 Bacteria 1460
46 Ga0105242_11237186 3300009176 Bacteria 767
47 Ga0105237_10004359 3300009545 Bacteria 16403
48 Ga0105249_10736079 3300009553 Bacteria 1048
49 Ga0105246_10084194 3300011119 Bacteria 2274
50 Ga0157369_10017127 3300013105 Bacteria 8141
51 Ga0157378_10600496 3300013297 Bacteria 1112
52 Ga0157372_10005695 3300013307 Bacteria 13258
53 Ga0163163_11274059 3300014325 Bacteria 797
54 Ga0157377_10128296 3300014745 Bacteria 1545
55 Ga0157376_10578039 3300014969 Bacteria 1115
56 Ga0207692_10227291 3300025898 Bacteria 1109
57 Ga0207654_10158641 3300025911 Bacteria 1459
58 Ga0207671_10063755 3300025914 Bacteria 2739
59 Ga0207663_10015224 3300025916 Bacteria 4238
60 Ga0207646_10000008 3300025922 Bacteria 457143
61 Ga0207646_10000009 3300025922 Bacteria 453146
62 Ga0207659_10252927 3300025926 Bacteria 1430
63 Ga0207659_10264725 3300025926 Bacteria 1400
64 Ga0207687_10041769 3300025927 Bacteria 3151
65 Ga0207664_10002101 3300025929 Bacteria 13100
66 Ga0207644_10158052 3300025931 Bacteria 1760
67 Ga0207706_10277861 3300025933 Bacteria 1461
68 Ga0207706_10320680 3300025933 Bacteria 1349
69 Ga0207670_10600439 3300025936 Bacteria 904
70 Ga0207651_10154417 3300025960 Bacteria 1791
71 Ga0207677_10047206 3300026023 Bacteria 2890
72 Ga0207639_10015927 3300026041 Bacteria 5309
73 Ga0207678_10577796 3300026067 Unclassified 984
74 Ga0207708_10001165 3300026075 Bacteria 19807
75 Ga0207702_10001595 3300026078 Bacteria 22439
76 Ga0207702_10337061 3300026078 Bacteria 1440
77 Ga0207676_10283601 3300026095 Bacteria 1505
78 Ga0207683_10141041 3300026121 Bacteria 2172
79 Ga0207428_10000004 3300027907 Bacteria 727800
80 Ga0207428_10329135 3300027907 Bacteria 1127
81 Ga0265332_10015658 3300031238 Bacteria 3348
82 Ga0265328_10045839 3300031239 Bacteria 1608
83 Ga0265339_10002660 3300031249 Bacteria 12730
84 Ga0265331_10026241 3300031250 Bacteria 2931
85 Ga0307509_10026428 3300031507 Bacteria 6472
86 Ga0265313_10095775 3300031595 Unclassified 1325
87 Ga0265313_10106053 3300031595 Bacteria 1241
88 Ga0307508_10002043 3300031616 Bacteria 21839
89 Ga0265314_10000903 3300031711 Bacteria 35128
90 Ga0265314_10026056 3300031711 Bacteria 4400
91 Ga0265314_10234075 3300031711 Bacteria 1063
92 Ga0265342_10117519 3300031712 Bacteria 1500
93 Ga0307516_10163029 3300031730 Bacteria 1978
94 Ga0373950_0000001 3300034818 Bacteria 1001987
95 Ga0373950_0000064 3300034818 Bacteria 58213
96 Ga0373941_0012912 3300035115 Unclassified 2195
97 Ga0373941_0118484 3300035115 Bacteria 941
98 Ga0373955_0108454 3300035172 Bacteria 1603
99 Ga0373935_0010541 3300035692 Bacteria 5546
100 Ga0373927_0060789 3300035695 Bacteria 2445
101 Ga0373927_0124980 3300035695 Bacteria 1679
102 Ga0373947_0028880 3300035725 Bacteria 3253
103 Ga0373925_0284147 3300037068 Bacteria 1333
104 Ga0373925_0331383 3300037068 Bacteria 1233
105 Ga0436364_0832091 3300037853 Bacteria 13859
106 Ga0242420_017689 3300038996 Bacteria 1250
107 Ga0436365_0602322 3300039437 Bacteria 1847
108 Ga0436365_1097151 3300039437 Unclassified 1147
109 Ga0436365_1666843 3300039437 Bacteria 13001
110 Ga0436365_1750726 3300039437 Bacteria 12518
111 Ga0436363_0535724 3300039450 Bacteria 8811
112 Ga0451577_0065792 3300042876 Bacteria 3233
113 Ga0453684_0003468 3300044712 Bacteria 35416
114 Ga0495629_0016304 3300046459 Bacteria 5331
115 Ga0495653_0009997 3300046463 Bacteria 7762
116 Ga0495664_0010109 3300046477 Bacteria 5294
117 Ga0495618_0062386 3300046514 Bacteria 2365
118 Ga0495618_0106906 3300046514 Bacteria 1792
119 Ga0495640_0017467 3300046533 Bacteria 5347
120 Ga0495645_0036277 3300046543 Unclassified 3594
121 Ga0495645_0046264 3300046543 Bacteria 3172
122 Ga0495674_0001653 3300047319 Bacteria 21923
123 Ga0495680_0167513 3300047322 Bacteria 1592
124 Ga0495684_0063276 3300047471 Bacteria 2813
125 Ga0496100_0376117 3300048903 Bacteria 1078
126 Ga0496102_0809361 3300048905 Bacteria 859
127 Ga0496103_0021880 3300048906 Bacteria 3848
128 Ga0496104_0013308 3300048907 Bacteria 7416
129 Ga0496104_0015768 3300048907 Bacteria 6853
130 Ga0496104_0035688 3300048907 Bacteria 4644
131 Ga0496105_0009483 3300048908 Bacteria 7616
132 Ga0496105_0018481 3300048908 Bacteria 5604
133 Ga0496108_0138774 3300048911 Bacteria 2094
134 Ga0496109_0078660 3300048912 Bacteria 3037
135 Ga0496109_0090552 3300048912 Bacteria 2829
136 Ga0496111_0531486 3300048914 Bacteria 864
137 Ga0496112_0340274 3300048915 Unclassified 1444
138 Ga0496112_0474942 3300048915 Bacteria 1187
139 Ga0496113_0510314 3300048916 Bacteria 965
140 Ga0496114_0216283 3300048917 Bacteria 1682
141 Ga0496115_0365983 3300048918 Bacteria 1174
142 Ga0496121_0181013 3300048924 Bacteria 1521
143 Ga0496124_0246951 3300048927 Unclassified 1323
144 Ga0496126_0041816 3300048929 Bacteria 4238
145 Ga0501033_0309444 3300049570 Bacteria 1111
146 Ga0501034_0000354 3300049571 Bacteria 78713
147 Ga0501043_0004063 3300049579 Bacteria 11964
148 Ga0501046_0000960 3300049580 Bacteria 28234
149 Ga0501047_0000001 3300049581 Bacteria 658799
150 Ga0501047_0474201 3300049581 Bacteria 1079
151 Ga0501048_0029228 3300049582 Bacteria 3998
152 Ga0501067_0000077 3300049583 Bacteria 56354
153 Ga0501068_0009360 3300049584 Bacteria 5478
154 Ga0501069_0097820 3300049585 Bacteria 1664
155 Ga0501072_0000019 3300049588 Bacteria 158156
156 Ga0501072_0029480 3300049588 Bacteria 4287
157 Ga0501073_0027908 3300049589 Bacteria 4033
158 Ga0501073_0046204 3300049589 Bacteria 3063
159 Ga0501074_0007080 3300049590 Bacteria 8105
160 Ga0501075_0002939 3300049591 Bacteria 11419
161 Ga0501076_0093225 3300049592 Bacteria 2423
162 Ga0501077_0008987 3300049593 Bacteria 6201
163 Ga0501079_0003980 3300049741 Bacteria 10921
164 Ga0501079_0006708 3300049741 Bacteria 8658
165 Ga0501080_0048942 3300049742 Bacteria 3934
166 Ga0501080_0065843 3300049742 Bacteria 3370
167 Ga0501081_0001242 3300049743 Bacteria 15502
168 Ga0501083_0012327 3300049744 Bacteria 5981
169 Ga0501083_0354967 3300049744 Bacteria 953
170 Ga0501035_0189510 3300049822 Bacteria 1768
171 Ga0501044_0097008 3300049823 Bacteria 2969
172 Ga0501044_0509464 3300049823 Bacteria 1104
173 nmdc:mga00v17_61477_c1 3300050491 Bacteria 2309
174 nmdc:mga0yw44_124540_c1 3300050492 Bacteria 1663
175 nmdc:mga05p37_294626_c1 3300050507 Bacteria 1930
176 nmdc:mga06r32_207325_c1 3300050510 Bacteria 1948
177 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
178 nmdc:mga08y16_436313_c1 3300050511 Unclassified 1337
179 nmdc:mga08y16_6058_c1 3300050511 Bacteria 12677
180 nmdc:mga0n895_94341_c1 3300050512 Unclassified 2996
181 Ga0495601_0000106 3300053077 Bacteria 45985
182 Ga0495612_0002101 3300053078 Bacteria 8189
183 Ga0495619_0000186 3300053085 Bacteria 45844
184 Ga0495619_0111480 3300053085 Bacteria 1870
185 Ga0500628_007526 3300053129 Bacteria 1869
186 Ga0500568_0010602 3300053139 Bacteria 4303
187 Ga0501084_0000046 3300054114 Bacteria 96044
188 Ga0501084_0017687 3300054114 Bacteria 5930
189 Ga0501082_0058239 3300060353 Bacteria 3329
190 2902842444 2902837492 Bacteria 6697721
191 3006976799 3006973921 Bacteria 4423788
192 Ga0075428_100000015
193 rootH1_10067607
194 rootL2_10189109
195 rootH1_10299126
196 Ga0070675_100330050
197 Ga0070671_100574758
198 Ga0070659_100205503
199 Ga0070709_10291020
200 Ga0070714_100000912
201 Ga0070663_100481746
202 Ga0070678_100007793
203 Ga0070678_100174946
204 Ga0070685_10074215
205 Ga0070707_100074089
206 Ga0070698_100002681
207 Ga0070698_100043946
208 Ga0070698_100070547
209 Ga0070699_100040577
210 Ga0070699_100110833
211 Ga0070679_100858653
212 Ga0070684_100495151
213 Ga0070697_100010981
214 Ga0068856_100001793
215 Ga0070702_100100760
216 Ga0068852_100386470
217 Ga0068864_100317235
218 Ga0081455_10067541
219 Ga0081455_10379078
220 Ga0075365_10020474
221 Ga0075363_100306568
222 Ga0075364_10026248
223 Ga0097621_100072956
224 Ga0068871_100110936
225 Ga0075428_100304875
226 Ga0075430_100230769
227 Ga0075431_100108183
228 Ga0075431_100130656
229 Ga0075431_100162491
230 Ga0068865_100200144
231 Ga0111539_10000002
232 Ga0111539_10034742
233 Ga0111539_10469427
234 Ga0105245_10072275
235 Ga0114129_10169922
236 Ga0105241_10265718
237 Ga0105242_11237186
238 Ga0105237_10004359
239 Ga0105249_10736079
240 Ga0105246_10084194
241 Ga0157369_10017127
242 Ga0157378_10600496
243 Ga0157372_10005695
244 Ga0163163_11274059
245 Ga0157377_10128296
246 Ga0157376_10578039
247 Ga0207692_10227291
248 Ga0207654_10158641
249 Ga0207671_10063755
250 Ga0207663_10015224
251 Ga0207646_10000008
252 Ga0207646_10000009
253 Ga0207659_10252927
254 Ga0207659_10264725
255 Ga0207687_10041769
256 Ga0207664_10002101
257 Ga0207644_10158052
258 Ga0207706_10277861
259 Ga0207706_10320680
260 Ga0207670_10600439
261 Ga0207651_10154417
262 Ga0207677_10047206
263 Ga0207639_10015927
264 Ga0207678_10577796
265 Ga0207708_10001165
266 Ga0207702_10001595
267 Ga0207702_10337061
268 Ga0207676_10283601
269 Ga0207683_10141041
270 Ga0207428_10000004
271 Ga0207428_10329135
272 Ga0265332_10015658
273 Ga0265328_10045839
274 Ga0265339_10002660
275 Ga0265331_10026241
276 Ga0307509_10026428
277 Ga0265313_10095775
278 Ga0265313_10106053
279 Ga0307508_10002043
280 Ga0265314_10000903
281 Ga0265314_10026056
282 Ga0265314_10234075
283 Ga0265342_10117519
284 Ga0307516_10163029
285 Ga0373950_0000001
286 Ga0373950_0000064
287 Ga0373941_0012912
288 Ga0373941_0118484
289 Ga0373955_0108454
290 Ga0373935_0010541
291 Ga0373927_0060789
292 Ga0373927_0124980
293 Ga0373947_0028880
294 Ga0373925_0284147
295 Ga0373925_0331383
296 Ga0436364_0832091
297 Ga0242420_017689
298 Ga0436365_0602322
299 Ga0436365_1097151
300 Ga0436365_1666843
301 Ga0436365_1750726
302 Ga0436363_0535724
303 Ga0451577_0065792
304 Ga0453684_0003468
305 Ga0495629_0016304
306 Ga0495653_0009997
307 Ga0495664_0010109
308 Ga0495618_0062386
309 Ga0495618_0106906
310 Ga0495640_0017467
311 Ga0495645_0036277
312 Ga0495645_0046264
313 Ga0495674_0001653
314 Ga0495680_0167513
315 Ga0495684_0063276
316 Ga0496100_0376117
317 Ga0496102_0809361
318 Ga0496103_0021880
319 Ga0496104_0013308
320 Ga0496104_0015768
321 Ga0496104_0035688
322 Ga0496105_0009483
323 Ga0496105_0018481
324 Ga0496108_0138774
325 Ga0496109_0078660
326 Ga0496109_0090552
327 Ga0496111_0531486
328 Ga0496112_0340274
329 Ga0496112_0474942
330 Ga0496113_0510314
331 Ga0496114_0216283
332 Ga0496115_0365983
333 Ga0496121_0181013
334 Ga0496124_0246951
335 Ga0496126_0041816
336 Ga0501033_0309444
337 Ga0501034_0000354
338 Ga0501043_0004063
339 Ga0501046_0000960
340 Ga0501047_0000001
341 Ga0501047_0474201
342 Ga0501048_0029228
343 Ga0501067_0000077
344 Ga0501068_0009360
345 Ga0501069_0097820
346 Ga0501072_0000019
347 Ga0501072_0029480
348 Ga0501073_0027908
349 Ga0501073_0046204
350 Ga0501074_0007080
351 Ga0501075_0002939
352 Ga0501076_0093225
353 Ga0501077_0008987
354 Ga0501079_0003980
355 Ga0501079_0006708
356 Ga0501080_0048942
357 Ga0501080_0065843
358 Ga0501081_0001242
359 Ga0501083_0012327
360 Ga0501083_0354967
361 Ga0501035_0189510
362 Ga0501044_0097008
363 Ga0501044_0509464
364 nmdc:mga00v17_61477_c1
365 nmdc:mga0yw44_124540_c1
366 nmdc:mga05p37_294626_c1
367 nmdc:mga06r32_207325_c1
368 nmdc:mga08y16_2_c1
369 nmdc:mga08y16_436313_c1
370 nmdc:mga08y16_6058_c1
371 nmdc:mga0n895_94341_c1
372 Ga0495601_0000106
373 Ga0495612_0002101
374 Ga0495619_0000186
375 Ga0495619_0111480
376 Ga0500628_007526
377 Ga0500568_0010602
378 Ga0501084_0000046
379 Ga0501084_0017687
380 Ga0501082_0058239
381 2902842444
382 3006976799

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00923

TAL_FSA

Transaldolase/Fructose-6-phosphate aldolase

14

241

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vpx-assembly2.cif.gz_N crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8861 19 235
1vpx-assembly2.cif.gz_L crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8847 18 235
1vpx-assembly2.cif.gz_M crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8846 19 233
1vpx-assembly1.cif.gz_H crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8781 19 237
1vpx-assembly1.cif.gz_D crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8779 18 237
ID Description Score Start End Superfamily
af_Q2FXE8_2_234_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9716 18 247 3.20.20.70
af_Q2FXE8_2_234_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9553 18 247 3.20.20.70
3r8rB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.877 20 241 3.20.20.70
3r8rB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8613 20 241 3.20.20.70
1l6wA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8255 20 247 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A381U858-F1-model_v4 Transaldolase 0.9982 42 128 GO:0005975
AF-A0A383AHD2-F1-model_v4 Transaldolase 0.9897 30 128 GO:0005975
AF-A0A382YVK6-F1-model_v4 Transaldolase 0.9864 41 249 GO:0005975
AF-A0A1F3Y0P6-F1-model_v4 Transaldolase 0.9856 20 226 GO:0005975
AF-A0A4Q1SGM5-F1-model_v4 Transaldolase (EC 2.2.1.2) 0.9847 15 249 GO:0004801
GO:0005975

Map