F293753

General Info

Members Datasets Scaffolds Average Seq Length
191 134 382 198

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100302275|Ga0068852_1003022752
Length 243
Sequence MFSQSLESIMSINDVVYINFLDGKDSVNILIFEILKQGNAKFVEIINMFTGIIEGLGKIVDVQVSGSNKTFWVESAISAELKPDESVSHDGVCLTVEQINEGAHRITAIEETVKKTNLGSWEKGDIINLERSLRMNGRIDGHIVQGHVDTTAVCIRKKVLDGSTELTFRFKEKFASLVIEKGSVCVNGISLTAFNVSKKKFTVAIIPYTIEHTNLSFVEEGSQVNIEFDMMGKYVQKYLRQIT

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
129 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
130 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
131 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
132 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
133 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
134 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.71
Nodule 0
Rhizoplane 0
Rhizosphere 93.72
Stem 0
Stem Tuber 0
Unclassified 8.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100302275 3300005616 Bacteria 1549
2 Ga0065712_10152248 3300005290 Bacteria 1360
3 Ga0070676_10034953 3300005328 Bacteria 2888
4 Ga0070676_10324429 3300005328 Bacteria 1051
5 Ga0070676_10402050 3300005328 Bacteria 953
6 Ga0070690_100007015 3300005330 Bacteria 6423
7 Ga0068869_100036722 3300005334 Bacteria 3480
8 Ga0068869_100616177 3300005334 Bacteria 918
9 Ga0068868_100763314 3300005338 Unclassified 870
10 Ga0070689_100265065 3300005340 Bacteria 1421
11 Ga0070687_100013448 3300005343 Bacteria 3649
12 Ga0070668_100015888 3300005347 Bacteria 5632
13 Ga0070668_100032786 3300005347 Bacteria 3953
14 Ga0070669_100005036 3300005353 Bacteria 9554
15 Ga0070675_100087789 3300005354 Bacteria 2601
16 Ga0070671_100443290 3300005355 Bacteria 1113
17 Ga0070674_100027008 3300005356 Bacteria 3757
18 Ga0070674_100886135 3300005356 Unclassified 776
19 Ga0070673_100034602 3300005364 Bacteria 3824
20 Ga0070673_100130634 3300005364 Bacteria 2107
21 Ga0070659_100681039 3300005366 Bacteria 888
22 Ga0070667_100768269 3300005367 Bacteria 894
23 Ga0070701_10161032 3300005438 Bacteria 1300
24 Ga0070700_100045788 3300005441 Bacteria 2700
25 Ga0070700_100207976 3300005441 Bacteria 1379
26 Ga0070678_100145386 3300005456 Bacteria 1902
27 Ga0070662_100068975 3300005457 Bacteria 2601
28 Ga0070662_100444845 3300005457 Bacteria 1075
29 Ga0070681_10945323 3300005458 Bacteria 781
30 Ga0068867_100024710 3300005459 Bacteria 4306
31 Ga0070679_100248823 3300005530 Bacteria 1734
32 Ga0070679_100274389 3300005530 Bacteria 1640
33 Ga0070672_100089854 3300005543 Bacteria 2476
34 Ga0070686_100022400 3300005544 Bacteria 3762
35 Ga0068855_100003319 3300005563 Bacteria 19687
36 Ga0070664_100174805 3300005564 Bacteria 1906
37 Ga0070664_100609076 3300005564 Bacteria 1013
38 Ga0068857_100058462 3300005577 Bacteria 3424
39 Ga0068857_100522122 3300005577 Unclassified 1116
40 Ga0068854_100286575 3300005578 Bacteria 1328
41 Ga0068854_100502895 3300005578 Bacteria 1021
42 Ga0070702_100189217 3300005615 Bacteria 1353
43 Ga0068852_100219003 3300005616 Bacteria 1809
44 Ga0068864_101119168 3300005618 Unclassified 784
45 Ga0068861_100133261 3300005719 Bacteria 2019
46 Ga0068863_100522575 3300005841 Bacteria 1170
47 Ga0068858_100150180 3300005842 Bacteria 2190
48 Ga0068860_100000241 3300005843 Bacteria 83429
49 Ga0068860_100971542 3300005843 Bacteria 867
50 Ga0068860_101649350 3300005843 Unclassified 663
51 Ga0068862_100131914 3300005844 Bacteria 2210
52 Ga0081539_10170580 3300005985 Bacteria 1029
53 Ga0075428_100037122 3300006844 Bacteria 5366
54 Ga0075428_100065903 3300006844 Bacteria 3966
55 Ga0075428_100248943 3300006844 Bacteria 1916
56 Ga0075428_100343906 3300006844 Bacteria 1601
57 Ga0075430_100044922 3300006846 Bacteria 3734
58 Ga0075431_100055435 3300006847 Bacteria 4089
59 Ga0075431_100297860 3300006847 Bacteria 1630
60 Ga0075429_100009140 3300006880 Bacteria 8604
61 Ga0068865_100060503 3300006881 Bacteria 2652
62 Ga0105240_10000283 3300009093 Bacteria 99553
63 Ga0111539_10058515 3300009094 Bacteria 4572
64 Ga0114129_10036444 3300009147 Bacteria 6945
65 Ga0114129_10369567 3300009147 Bacteria 1896
66 Ga0105241_10000409 3300009174 Bacteria 32453
67 Ga0105241_10176325 3300009174 Bacteria 1769
68 Ga0105242_10257897 3300009176 Bacteria 1574
69 Ga0105238_10050701 3300009551 Bacteria 4177
70 Ga0105249_10009527 3300009553 Bacteria 8510
71 Ga0105239_10018061 3300010375 Bacteria 7803
72 Ga0157371_10016271 3300013102 Bacteria 5555
73 Ga0157371_10033769 3300013102 Bacteria 3674
74 Ga0157371_10129751 3300013102 Bacteria 1793
75 Ga0157371_10581799 3300013102 Unclassified 832
76 Ga0157370_10082695 3300013104 Bacteria 3019
77 Ga0157369_10495391 3300013105 Unclassified 1264
78 Ga0157369_11049795 3300013105 Bacteria 834
79 Ga0157378_10006624 3300013297 Bacteria 10121
80 Ga0157378_10216694 3300013297 Unclassified 1818
81 Ga0163162_10000216 3300013306 Bacteria 52917
82 Ga0163162_10160511 3300013306 Bacteria 2370
83 Ga0163162_10221507 3300013306 Bacteria 2022
84 Ga0163162_10264730 3300013306 Bacteria 1851
85 Ga0157372_10102691 3300013307 Bacteria 3266
86 Ga0157372_10109647 3300013307 Bacteria 3161
87 Ga0157372_10111873 3300013307 Unclassified 3128
88 Ga0157372_10234650 3300013307 Bacteria 2127
89 Ga0157375_10042217 3300013308 Bacteria 4413
90 Ga0157375_10142100 3300013308 Bacteria 2528
91 Ga0163163_10000317 3300014325 Bacteria 47023
92 Ga0157380_10020477 3300014326 Bacteria 4944
93 Ga0157380_10172376 3300014326 Bacteria 1892
94 Ga0157380_10726220 3300014326 Bacteria 1001
95 Ga0157377_10024986 3300014745 Bacteria 3181
96 Ga0157377_10070256 3300014745 Unclassified 2022
97 Ga0157377_10579479 3300014745 Bacteria 797
98 Ga0157379_10476983 3300014968 Bacteria 1154
99 Ga0157379_10812558 3300014968 Unclassified 883
100 Ga0157376_10151523 3300014969 Bacteria 2092
101 Ga0163161_10131432 3300017792 Bacteria 1889
102 Ga0213876_10047452 3300021384 Bacteria 2270
103 Ga0207688_10071670 3300025901 Bacteria 1967
104 Ga0207645_10022101 3300025907 Bacteria 4143
105 Ga0207645_10353178 3300025907 Bacteria 984
106 Ga0207643_10024208 3300025908 Bacteria 3350
107 Ga0207654_10002145 3300025911 Bacteria 10105
108 Ga0207695_10003728 3300025913 Bacteria 21215
109 Ga0207671_10001126 3300025914 Bacteria 32182
110 Ga0207662_10007172 3300025918 Bacteria 6063
111 Ga0207652_10149559 3300025921 Bacteria 2090
112 Ga0207652_10302983 3300025921 Bacteria 1442
113 Ga0207681_10004291 3300025923 Bacteria 8799
114 Ga0207694_10244979 3300025924 Bacteria 1465
115 Ga0207659_10125276 3300025926 Bacteria 1975
116 Ga0207644_10012727 3300025931 Bacteria 5594
117 Ga0207690_10534859 3300025932 Bacteria 951
118 Ga0207706_10156546 3300025933 Bacteria 2003
119 Ga0207706_10377237 3300025933 Bacteria 1231
120 Ga0207686_10110878 3300025934 Bacteria 1850
121 Ga0207670_10083860 3300025936 Bacteria 2236
122 Ga0207670_10457557 3300025936 Unclassified 1030
123 Ga0207691_10078377 3300025940 Bacteria 2975
124 Ga0207689_10054415 3300025942 Bacteria 3295
125 Ga0207689_10068263 3300025942 Bacteria 2922
126 Ga0207689_10382327 3300025942 Bacteria 1172
127 Ga0207667_10019088 3300025949 Bacteria 7665
128 Ga0207651_10021186 3300025960 Bacteria 3944
129 Ga0207651_10033174 3300025960 Bacteria 3327
130 Ga0207668_10283752 3300025972 Bacteria 1359
131 Ga0207640_10063652 3300025981 Bacteria 2452
132 Ga0207640_10356292 3300025981 Bacteria 1177
133 Ga0207708_10127700 3300026075 Bacteria 1985
134 Ga0207708_10169618 3300026075 Bacteria 1727
135 Ga0207648_10046525 3300026089 Bacteria 3804
136 Ga0207648_10106507 3300026089 Bacteria 2460
137 Ga0207674_10043777 3300026116 Bacteria 4614
138 Ga0207675_100035691 3300026118 Bacteria 4637
139 Ga0207675_100159308 3300026118 Bacteria 2152
140 Ga0207683_10174767 3300026121 Bacteria 1946
141 Ga0207698_10476961 3300026142 Bacteria 1209
142 Ga0207698_10788571 3300026142 Bacteria 951
143 Ga0268265_10154781 3300028380 Bacteria 1938
144 Ga0268264_10000011 3300028381 Bacteria 580884
145 Ga0268264_11434589 3300028381 Unclassified 701
146 Ga0265327_10000093 3300031251 Bacteria 195220
147 Ga0265327_10077346 3300031251 Unclassified 1651
148 Ga0307510_10000119 3300033180 Bacteria 62835
149 Ga0395899_0022756 3300037312 Bacteria 4748
150 Ga0395900_0006461 3300037418 Bacteria 12219
151 Ga0395898_0023468 3300037466 Bacteria 6232
152 Ga0395905_0953268 3300037471 Bacteria 761
153 Ga0395901_0001308 3300038443 Bacteria 26259
154 Ga0436365_1574442 3300039437 Bacteria 18702
155 Ga0439441_001466 3300042001 Bacteria 3090
156 Ga0466972_0000003 3300044658 Bacteria 391452
157 Ga0466965_0256066 3300044683 Bacteria 940
158 Ga0466970_0002919 3300044765 Bacteria 8285
159 Ga0466957_0017372 3300044842 Bacteria 4211
160 Ga0466967_1103192 3300045976 Bacteria 791
161 Ga0495638_0107525 3300046460 Bacteria 1661
162 Ga0495580_0116732 3300046472 Bacteria 1854
163 Ga0495611_0109072 3300046648 Bacteria 1288
164 Ga0495674_0305839 3300047319 Bacteria 1298
165 Ga0495687_000001 3300047443 Bacteria 1215582
166 Ga0501031_0171525 3300049568 Bacteria 1417
167 Ga0501034_0099205 3300049571 Bacteria 2908
168 Ga0501036_0289967 3300049572 Bacteria 1369
169 Ga0501037_0097999 3300049573 Bacteria 2118
170 Ga0501038_0112197 3300049574 Bacteria 2257
171 Ga0501039_0004205 3300049575 Bacteria 10840
172 Ga0501043_0051490 3300049579 Bacteria 3235
173 Ga0501047_0497565 3300049581 Bacteria 1046
174 Ga0501035_0005071 3300049822 Bacteria 12483
175 Ga0501044_0048736 3300049823 Bacteria 4375
176 Ga0501044_0057242 3300049823 Bacteria 4001
177 Ga0501044_0134187 3300049823 Unclassified 2468
178 nmdc:mga05p37_24092_c1 3300050507 Bacteria 7393
179 nmdc:mga09592_47672_c1 3300050508 Bacteria 3612
180 nmdc:mga09592_533059_c1 3300050508 Bacteria 1009
181 nmdc:mga0qj67_16486_c1 3300050509 Bacteria 5606
182 nmdc:mga06r32_386823_c1 3300050510 Bacteria 1381
183 Ga0500646_0018698 3300053090 Bacteria 1827
184 Ga0500646_0041738 3300053090 Bacteria 1294
185 Ga0500646_0132154 3300053090 Unclassified 812
186 Ga0500583_0061496 3300053092 Bacteria 1773
187 Ga0500650_0175451 3300053098 Bacteria 984
188 Ga0500568_0026701 3300053139 Bacteria 2421
189 Ga0500577_0236262 3300053142 Bacteria 793
190 Ga0500622_0011760 3300053156 Bacteria 4757
191 Ga0500611_048142 3300053727 Unclassified 966
192 Ga0068852_100302275
193 Ga0065712_10152248
194 Ga0070676_10034953
195 Ga0070676_10324429
196 Ga0070676_10402050
197 Ga0070690_100007015
198 Ga0068869_100036722
199 Ga0068869_100616177
200 Ga0068868_100763314
201 Ga0070689_100265065
202 Ga0070687_100013448
203 Ga0070668_100015888
204 Ga0070668_100032786
205 Ga0070669_100005036
206 Ga0070675_100087789
207 Ga0070671_100443290
208 Ga0070674_100027008
209 Ga0070674_100886135
210 Ga0070673_100034602
211 Ga0070673_100130634
212 Ga0070659_100681039
213 Ga0070667_100768269
214 Ga0070701_10161032
215 Ga0070700_100045788
216 Ga0070700_100207976
217 Ga0070678_100145386
218 Ga0070662_100068975
219 Ga0070662_100444845
220 Ga0070681_10945323
221 Ga0068867_100024710
222 Ga0070679_100248823
223 Ga0070679_100274389
224 Ga0070672_100089854
225 Ga0070686_100022400
226 Ga0068855_100003319
227 Ga0070664_100174805
228 Ga0070664_100609076
229 Ga0068857_100058462
230 Ga0068857_100522122
231 Ga0068854_100286575
232 Ga0068854_100502895
233 Ga0070702_100189217
234 Ga0068852_100219003
235 Ga0068864_101119168
236 Ga0068861_100133261
237 Ga0068863_100522575
238 Ga0068858_100150180
239 Ga0068860_100000241
240 Ga0068860_100971542
241 Ga0068860_101649350
242 Ga0068862_100131914
243 Ga0081539_10170580
244 Ga0075428_100037122
245 Ga0075428_100065903
246 Ga0075428_100248943
247 Ga0075428_100343906
248 Ga0075430_100044922
249 Ga0075431_100055435
250 Ga0075431_100297860
251 Ga0075429_100009140
252 Ga0068865_100060503
253 Ga0105240_10000283
254 Ga0111539_10058515
255 Ga0114129_10036444
256 Ga0114129_10369567
257 Ga0105241_10000409
258 Ga0105241_10176325
259 Ga0105242_10257897
260 Ga0105238_10050701
261 Ga0105249_10009527
262 Ga0105239_10018061
263 Ga0157371_10016271
264 Ga0157371_10033769
265 Ga0157371_10129751
266 Ga0157371_10581799
267 Ga0157370_10082695
268 Ga0157369_10495391
269 Ga0157369_11049795
270 Ga0157378_10006624
271 Ga0157378_10216694
272 Ga0163162_10000216
273 Ga0163162_10160511
274 Ga0163162_10221507
275 Ga0163162_10264730
276 Ga0157372_10102691
277 Ga0157372_10109647
278 Ga0157372_10111873
279 Ga0157372_10234650
280 Ga0157375_10042217
281 Ga0157375_10142100
282 Ga0163163_10000317
283 Ga0157380_10020477
284 Ga0157380_10172376
285 Ga0157380_10726220
286 Ga0157377_10024986
287 Ga0157377_10070256
288 Ga0157377_10579479
289 Ga0157379_10476983
290 Ga0157379_10812558
291 Ga0157376_10151523
292 Ga0163161_10131432
293 Ga0213876_10047452
294 Ga0207688_10071670
295 Ga0207645_10022101
296 Ga0207645_10353178
297 Ga0207643_10024208
298 Ga0207654_10002145
299 Ga0207695_10003728
300 Ga0207671_10001126
301 Ga0207662_10007172
302 Ga0207652_10149559
303 Ga0207652_10302983
304 Ga0207681_10004291
305 Ga0207694_10244979
306 Ga0207659_10125276
307 Ga0207644_10012727
308 Ga0207690_10534859
309 Ga0207706_10156546
310 Ga0207706_10377237
311 Ga0207686_10110878
312 Ga0207670_10083860
313 Ga0207670_10457557
314 Ga0207691_10078377
315 Ga0207689_10054415
316 Ga0207689_10068263
317 Ga0207689_10382327
318 Ga0207667_10019088
319 Ga0207651_10021186
320 Ga0207651_10033174
321 Ga0207668_10283752
322 Ga0207640_10063652
323 Ga0207640_10356292
324 Ga0207708_10127700
325 Ga0207708_10169618
326 Ga0207648_10046525
327 Ga0207648_10106507
328 Ga0207674_10043777
329 Ga0207675_100035691
330 Ga0207675_100159308
331 Ga0207683_10174767
332 Ga0207698_10476961
333 Ga0207698_10788571
334 Ga0268265_10154781
335 Ga0268264_10000011
336 Ga0268264_11434589
337 Ga0265327_10000093
338 Ga0265327_10077346
339 Ga0307510_10000119
340 Ga0395899_0022756
341 Ga0395900_0006461
342 Ga0395898_0023468
343 Ga0395905_0953268
344 Ga0395901_0001308
345 Ga0436365_1574442
346 Ga0439441_001466
347 Ga0466972_0000003
348 Ga0466965_0256066
349 Ga0466970_0002919
350 Ga0466957_0017372
351 Ga0466967_1103192
352 Ga0495638_0107525
353 Ga0495580_0116732
354 Ga0495611_0109072
355 Ga0495674_0305839
356 Ga0495687_000001
357 Ga0501031_0171525
358 Ga0501034_0099205
359 Ga0501036_0289967
360 Ga0501037_0097999
361 Ga0501038_0112197
362 Ga0501039_0004205
363 Ga0501043_0051490
364 Ga0501047_0497565
365 Ga0501035_0005071
366 Ga0501044_0048736
367 Ga0501044_0057242
368 Ga0501044_0134187
369 nmdc:mga05p37_24092_c1
370 nmdc:mga09592_47672_c1
371 nmdc:mga09592_533059_c1
372 nmdc:mga0qj67_16486_c1
373 nmdc:mga06r32_386823_c1
374 Ga0500646_0018698
375 Ga0500646_0041738
376 Ga0500646_0132154
377 Ga0500583_0061496
378 Ga0500650_0175451
379 Ga0500568_0026701
380 Ga0500577_0236262
381 Ga0500622_0011760
382 Ga0500611_048142

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00677

Lum_binding

Lumazine binding domain

145

229

0.97

PF00677

Lum_binding

Lumazine binding domain

50

132

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9641 1 193
4gqn-assembly1.cif.gz_C crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with 5-nitro-6-(d-ribitylamino)-2,4(1h,3h) pyrimidinedione 0.9599 1 193
4g6i-assembly1.cif.gz_B crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with roseoflavin 0.9577 1 196
1i8d-assembly1.cif.gz_A crystal structure of riboflavin synthase 0.9568 1 195
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9544 1 193
ID Description Score Start End Superfamily
af_P9WK35_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9655 1 86 2.40.30.20
4fxuC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9619 100 190 2.40.30.20
af_P0AFU8_1_89_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9614 1 87 2.40.30.20
af_Q2FXG0_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9594 1 87 2.40.30.20
af_B7FAH8_195_301_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9567 100 193 2.40.30.20
ID Description Score Start End GO Terms
AF-A0A4R8DEA1-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9908 1 195 GO:0004746
GO:0009231
AF-A0A832BGA4-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9905 1 195 GO:0004746
GO:0009231
AF-A0A1M3ID20-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.989 1 194 GO:0004746
GO:0009231
AF-A0A4Q2ZYU6-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9882 1 195 GO:0004746
GO:0009231
AF-A0A381NKD2-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9864 1 196 GO:0004746
GO:0009231

Map