F293156

General Info

Members Datasets Scaffolds Average Seq Length
190 119 380 495

Family's Representative Sequence

Representative Sequence 3300049585|Ga0501069_0000043|Ga0501069_0000043_24284_25912
Length 542
Sequence MRFHLRQPARTRAISKVDVDLNFEKTLLVTSVLLHHGLEEAAQRWGDRVAVRAGEAQWTYGELDGLANAFARVLAAAGVEVGSRVAVMTSNRVEFVVAVNAISKLGAAAVLVSPAWKTREVGHALAITAPSHAVTDGDSTAVMSEHLSPSVVLDLDSPPLAGAAGQDRRPLPPADVADTAESVLVFSSGTTGLPKAVRHSHSSMGHATRHWVQTLGLGPDDRFQVATPPSHILGLLNLVTAAAAGAMVRLHARFDLDEVLARIESDRMTLEMAVAPIALALANHPDLERYDLSSLRYIMWGATPVTDHVARVVTERTGVRWLPAYGASEVPVISVNPVDRPDEWRLDSAGLPPDGVSLRVADLDTGEVLAPGEVGEIQVHSPSVMTGYLPDAATADAFVDGWYRTGDVGWLEPDGWVHLTDRSKEMIKVRGFQVAPAEIEAVLLGHPAVRDCAVFGLADESAGEVPVAAVQLDPAHPVADGELARLVADSLATYKQVRHVVVVDAIPRLASGKALRRTLREELTPSLLASGATAADVPSEEA

Samples

Sample ID Description Type Environment
1 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
41 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
42 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
45 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
46 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
47 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
48 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
49 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
50 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
58 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
64 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
67 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
68 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
69 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
70 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
102 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
106 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
115 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
116 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.47
Metatranscriptomes 0
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.26
Nodule 0
Rhizoplane 2.63
Rhizosphere 84.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501069_0000043 3300049585 Bacteria 77795
2 JGI25407J50210_10000950 3300003373 Bacteria 6250
3 Ga0070683_100012710 3300005329 Bacteria 7321
4 Ga0070670_100165987 3300005331 Bacteria 1914
5 Ga0070680_100000092 3300005336 Bacteria 50891
6 Ga0070671_100000466 3300005355 Bacteria 28188
7 Ga0070714_100035963 3300005435 Bacteria 4151
8 Ga0070713_100033118 3300005436 Bacteria 4136
9 Ga0070708_100112370 3300005445 Bacteria 2505
10 Ga0070681_10000054 3300005458 Bacteria 80396
11 Ga0070698_100001547 3300005471 Bacteria 25515
12 Ga0070679_100000625 3300005530 Bacteria 30111
13 Ga0068858_100007219 3300005842 Bacteria 10772
14 Ga0068858_100015055 3300005842 Bacteria 7275
15 Ga0081455_10002429 3300005937 Bacteria 22223
16 Ga0081455_10002836 3300005937 Bacteria 20400
17 Ga0081455_10038417 3300005937 Bacteria 4240
18 Ga0081538_10000383 3300005981 Bacteria 50305
19 Ga0081538_10033195 3300005981 Bacteria 3441
20 Ga0081539_10016924 3300005985 Bacteria 5165
21 Ga0075363_100011656 3300006048 Bacteria 4217
22 Ga0075364_10002964 3300006051 Bacteria 9584
23 Ga0075364_10003774 3300006051 Bacteria 8661
24 Ga0075369_10014178 3300006186 Bacteria 3180
25 Ga0075428_100000955 3300006844 Bacteria 30623
26 Ga0075428_100007591 3300006844 Bacteria 12021
27 Ga0075428_100086187 3300006844 Bacteria 3425
28 Ga0075430_100004052 3300006846 Bacteria 12365
29 Ga0075430_100020113 3300006846 Bacteria 5680
30 Ga0075431_100000463 3300006847 Bacteria 33500
31 Ga0075431_100027704 3300006847 Bacteria 5816
32 Ga0075431_100061528 3300006847 Bacteria 3873
33 Ga0075429_100001084 3300006880 Bacteria 21853
34 Ga0075429_100003169 3300006880 Bacteria 13981
35 Ga0075429_100041919 3300006880 Bacteria 3985
36 Ga0111539_10026024 3300009094 Bacteria 7161
37 Ga0114129_10000160 3300009147 Bacteria 72462
38 Ga0114129_10138169 3300009147 Bacteria 3343
39 Ga0114129_10168220 3300009147 Bacteria 2990
40 Ga0163163_10107546 3300014325 Bacteria 2816
41 Ga0163163_10125410 3300014325 Bacteria 2605
42 Ga0157379_10092276 3300014968 Bacteria 2716
43 Ga0213876_10000753 3300021384 Bacteria 22381
44 Ga0213876_10006266 3300021384 Bacteria 6485
45 Ga0213876_10011890 3300021384 Bacteria 4640
46 Ga0207707_10000970 3300025912 Bacteria 27583
47 Ga0207660_10000448 3300025917 Bacteria 27098
48 Ga0207652_10000033 3300025921 Bacteria 139131
49 Ga0207646_10019829 3300025922 Bacteria 6242
50 Ga0207700_10033411 3300025928 Bacteria 3681
51 Ga0207703_10011104 3300026035 Bacteria 7014
52 Ga0207428_10025899 3300027907 Bacteria 4901
53 Ga0265338_10140768 3300028800 Bacteria 1890
54 Ga0265327_10001231 3300031251 Bacteria 34376
55 Ga0265327_10006599 3300031251 Bacteria 9223
56 Ga0316576_10010482 3300031727 Bacteria 6025
57 Ga0307415_100023480 3300032126 Bacteria 3829
58 Ga0373926_0000462 3300035083 Bacteria 10656
59 Ga0373937_0089318 3300036401 Bacteria 2853
60 Ga0436364_1394074 3300037853 Bacteria 1680
61 Ga0436365_0360732 3300039437 Bacteria 9389
62 Ga0436365_0512960 3300039437 Bacteria 4654
63 Ga0436365_0532916 3300039437 Bacteria 9722
64 Ga0436365_1572675 3300039437 Bacteria 39347
65 Ga0436365_1627569 3300039437 Bacteria 24179
66 Ga0436361_0849732 3300039447 Bacteria 2433
67 Ga0436362_0106244 3300039453 Bacteria 7195
68 Ga0439448_0009465 3300042005 Bacteria 2873
69 Ga0439434_0011659 3300042435 Bacteria 2599
70 Ga0439464_0016179 3300042439 Bacteria 2016
71 Ga0439460_0003646 3300042461 Bacteria 3731
72 Ga0439440_0004112 3300042993 Bacteria 2845
73 Ga0466965_0033508 3300044683 Bacteria 2511
74 Ga0466966_0007087 3300044684 Bacteria 7430
75 Ga0466963_0025141 3300044694 Bacteria 3796
76 Ga0466963_0089017 3300044694 Bacteria 2100
77 Ga0466957_0099626 3300044842 Bacteria 1830
78 Ga0466959_0006371 3300045049 Bacteria 8170
79 Ga0466959_0095791 3300045049 Bacteria 2128
80 Ga0466967_0010009 3300045976 Bacteria 7082
81 Ga0466967_0048657 3300045976 Bacteria 3704
82 Ga0466967_0084640 3300045976 Bacteria 2870
83 Ga0466967_0090126 3300045976 Bacteria 2785
84 Ga0466967_0094348 3300045976 Bacteria 2725
85 Ga0495628_0016272 3300046516 Bacteria 6205
86 Ga0495628_0111090 3300046516 Bacteria 2108
87 Ga0495630_0004571 3300046517 Bacteria 9696
88 Ga0495640_0043753 3300046533 Bacteria 3117
89 Ga0495640_0123656 3300046533 Bacteria 1680
90 Ga0495586_0022339 3300046535 Bacteria 3377
91 Ga0495645_0092852 3300046543 Bacteria 2155
92 Ga0495634_0003210 3300046642 Bacteria 13223
93 Ga0495657_0055513 3300046675 Bacteria 2641
94 Ga0495623_0039175 3300046679 Bacteria 3029
95 Ga0495613_0003004 3300046689 Bacteria 12632
96 Ga0495604_0060861 3300047317 Bacteria 2890
97 Ga0495604_0198673 3300047317 Bacteria 1393
98 Ga0495672_0009878 3300047320 Bacteria 6861
99 Ga0495684_0084552 3300047471 Bacteria 2406
100 Ga0495602_0102187 3300048088 Bacteria 2350
101 Ga0496100_0028747 3300048903 Bacteria 3432
102 Ga0496101_0002684 3300048904 Bacteria 10924
103 Ga0496105_0022907 3300048908 Bacteria 5063
104 Ga0496110_0037205 3300048913 Bacteria 4230
105 Ga0496114_0055279 3300048917 Bacteria 3311
106 Ga0496118_0000185 3300048921 Bacteria 109095
107 Ga0496126_0000027 3300048929 Bacteria 396518
108 Ga0496126_0000104 3300048929 Bacteria 200735
109 Ga0496126_0019379 3300048929 Bacteria 6701
110 Ga0501032_0048366 3300049569 Bacteria 2872
111 Ga0501032_0058238 3300049569 Bacteria 2594
112 Ga0501033_0000559 3300049570 Bacteria 34638
113 Ga0501033_0070145 3300049570 Bacteria 2575
114 Ga0501034_0001109 3300049571 Bacteria 37776
115 Ga0501034_0003163 3300049571 Bacteria 18924
116 Ga0501034_0065978 3300049571 Bacteria 3633
117 Ga0501036_0017776 3300049572 Bacteria 5954
118 Ga0501036_0104994 3300049572 Bacteria 2389
119 Ga0501037_0031388 3300049573 Bacteria 3923
120 Ga0501037_0048663 3300049573 Bacteria 3105
121 Ga0501037_0078393 3300049573 Bacteria 2397
122 Ga0501038_0004405 3300049574 Bacteria 13105
123 Ga0501039_0021848 3300049575 Bacteria 4910
124 Ga0501040_0003825 3300049576 Bacteria 9770
125 Ga0501041_0003938 3300049577 Bacteria 8565
126 Ga0501043_0015843 3300049579 Bacteria 5908
127 Ga0501046_0001136 3300049580 Bacteria 25942
128 Ga0501046_0056924 3300049580 Bacteria 3067
129 Ga0501047_0008199 3300049581 Bacteria 9869
130 Ga0501047_0263130 3300049581 Bacteria 1572
131 Ga0501048_0001774 3300049582 Bacteria 16425
132 Ga0501048_0030637 3300049582 Bacteria 3892
133 Ga0501068_0007462 3300049584 Bacteria 6053
134 Ga0501068_0013119 3300049584 Bacteria 4710
135 Ga0501069_0000817 3300049585 Bacteria 14685
136 Ga0501069_0004699 3300049585 Bacteria 7058
137 Ga0501069_0005787 3300049585 Bacteria 6438
138 Ga0501070_0000298 3300049586 Bacteria 46144
139 Ga0501070_0000622 3300049586 Bacteria 32559
140 Ga0501070_0000942 3300049586 Bacteria 26254
141 Ga0501070_0002170 3300049586 Bacteria 17249
142 Ga0501070_0008285 3300049586 Bacteria 8787
143 Ga0501070_0080706 3300049586 Bacteria 2691
144 Ga0501070_0084764 3300049586 Bacteria 2623
145 Ga0501070_0124070 3300049586 Bacteria 2134
146 Ga0501070_0129910 3300049586 Bacteria 2081
147 Ga0501071_0003838 3300049587 Bacteria 9455
148 Ga0501071_0011360 3300049587 Bacteria 5999
149 Ga0501072_0053876 3300049588 Bacteria 3168
150 Ga0501073_0000574 3300049589 Bacteria 25952
151 Ga0501073_0147917 3300049589 Bacteria 1628
152 Ga0501074_0002539 3300049590 Bacteria 12725
153 Ga0501074_0005003 3300049590 Bacteria 9513
154 Ga0501075_0051681 3300049591 Bacteria 3090
155 Ga0501076_0052455 3300049592 Bacteria 3231
156 Ga0501076_0066473 3300049592 Bacteria 2878
157 Ga0501077_0001489 3300049593 Bacteria 14116
158 Ga0501079_0000615 3300049741 Bacteria 23598
159 Ga0501079_0048684 3300049741 Bacteria 3270
160 Ga0501080_0000573 3300049742 Bacteria 29140
161 Ga0501080_0008432 3300049742 Bacteria 9336
162 Ga0501080_0012199 3300049742 Bacteria 7874
163 Ga0501080_0012680 3300049742 Bacteria 7730
164 Ga0501080_0018215 3300049742 Bacteria 6500
165 Ga0501081_0002594 3300049743 Bacteria 11420
166 Ga0501083_0000608 3300049744 Bacteria 23082
167 Ga0501035_0017267 3300049822 Bacteria 6653
168 Ga0501044_0001366 3300049823 Bacteria 28620
169 Ga0501044_0002308 3300049823 Bacteria 21735
170 Ga0501044_0019863 3300049823 Bacteria 7175
171 Ga0501044_0197627 3300049823 Bacteria 1970
172 Ga0501045_0008416 3300049824 Bacteria 7190
173 nmdc:mga03n38_35010_c1 3300050490 Bacteria 2149
174 nmdc:mga00v17_1177_c1 3300050491 Bacteria 13738
175 nmdc:mga00v17_68193_c1 3300050491 Bacteria 2199
176 nmdc:mga0yw44_95465_c1 3300050492 Bacteria 1886
177 nmdc:mga05p37_180094_c1 3300050507 Bacteria 2572
178 nmdc:mga05p37_61692_c1 3300050507 Bacteria 4615
179 nmdc:mga09592_1137_c1 3300050508 Bacteria 21197
180 nmdc:mga0qj67_39298_c1 3300050509 Bacteria 3715
181 nmdc:mga06r32_14801_c1 3300050510 Bacteria 7079
182 nmdc:mga06r32_9149_c1 3300050510 Bacteria 8929
183 nmdc:mga08y16_20852_c1 3300050511 Bacteria 6919
184 nmdc:mga0sz30_18810_c1 3300050516 Bacteria 2768
185 Ga0495595_0037326 3300053084 Bacteria 2208
186 Ga0500566_0000606 3300053094 Bacteria 20147
187 Ga0501084_0001510 3300054114 Bacteria 18464
188 Ga0501084_0020584 3300054114 Bacteria 5501
189 Ga0530510_0042059 3300061734 Bacteria 3300
190 2809197532 2808606439 Bacteria 5952208
191 Ga0501069_0000043
192 JGI25407J50210_10000950
193 Ga0070683_100012710
194 Ga0070670_100165987
195 Ga0070680_100000092
196 Ga0070671_100000466
197 Ga0070714_100035963
198 Ga0070713_100033118
199 Ga0070708_100112370
200 Ga0070681_10000054
201 Ga0070698_100001547
202 Ga0070679_100000625
203 Ga0068858_100007219
204 Ga0068858_100015055
205 Ga0081455_10002429
206 Ga0081455_10002836
207 Ga0081455_10038417
208 Ga0081538_10000383
209 Ga0081538_10033195
210 Ga0081539_10016924
211 Ga0075363_100011656
212 Ga0075364_10002964
213 Ga0075364_10003774
214 Ga0075369_10014178
215 Ga0075428_100000955
216 Ga0075428_100007591
217 Ga0075428_100086187
218 Ga0075430_100004052
219 Ga0075430_100020113
220 Ga0075431_100000463
221 Ga0075431_100027704
222 Ga0075431_100061528
223 Ga0075429_100001084
224 Ga0075429_100003169
225 Ga0075429_100041919
226 Ga0111539_10026024
227 Ga0114129_10000160
228 Ga0114129_10138169
229 Ga0114129_10168220
230 Ga0163163_10107546
231 Ga0163163_10125410
232 Ga0157379_10092276
233 Ga0213876_10000753
234 Ga0213876_10006266
235 Ga0213876_10011890
236 Ga0207707_10000970
237 Ga0207660_10000448
238 Ga0207652_10000033
239 Ga0207646_10019829
240 Ga0207700_10033411
241 Ga0207703_10011104
242 Ga0207428_10025899
243 Ga0265338_10140768
244 Ga0265327_10001231
245 Ga0265327_10006599
246 Ga0316576_10010482
247 Ga0307415_100023480
248 Ga0373926_0000462
249 Ga0373937_0089318
250 Ga0436364_1394074
251 Ga0436365_0360732
252 Ga0436365_0512960
253 Ga0436365_0532916
254 Ga0436365_1572675
255 Ga0436365_1627569
256 Ga0436361_0849732
257 Ga0436362_0106244
258 Ga0439448_0009465
259 Ga0439434_0011659
260 Ga0439464_0016179
261 Ga0439460_0003646
262 Ga0439440_0004112
263 Ga0466965_0033508
264 Ga0466966_0007087
265 Ga0466963_0025141
266 Ga0466963_0089017
267 Ga0466957_0099626
268 Ga0466959_0006371
269 Ga0466959_0095791
270 Ga0466967_0010009
271 Ga0466967_0048657
272 Ga0466967_0084640
273 Ga0466967_0090126
274 Ga0466967_0094348
275 Ga0495628_0016272
276 Ga0495628_0111090
277 Ga0495630_0004571
278 Ga0495640_0043753
279 Ga0495640_0123656
280 Ga0495586_0022339
281 Ga0495645_0092852
282 Ga0495634_0003210
283 Ga0495657_0055513
284 Ga0495623_0039175
285 Ga0495613_0003004
286 Ga0495604_0060861
287 Ga0495604_0198673
288 Ga0495672_0009878
289 Ga0495684_0084552
290 Ga0495602_0102187
291 Ga0496100_0028747
292 Ga0496101_0002684
293 Ga0496105_0022907
294 Ga0496110_0037205
295 Ga0496114_0055279
296 Ga0496118_0000185
297 Ga0496126_0000027
298 Ga0496126_0000104
299 Ga0496126_0019379
300 Ga0501032_0048366
301 Ga0501032_0058238
302 Ga0501033_0000559
303 Ga0501033_0070145
304 Ga0501034_0001109
305 Ga0501034_0003163
306 Ga0501034_0065978
307 Ga0501036_0017776
308 Ga0501036_0104994
309 Ga0501037_0031388
310 Ga0501037_0048663
311 Ga0501037_0078393
312 Ga0501038_0004405
313 Ga0501039_0021848
314 Ga0501040_0003825
315 Ga0501041_0003938
316 Ga0501043_0015843
317 Ga0501046_0001136
318 Ga0501046_0056924
319 Ga0501047_0008199
320 Ga0501047_0263130
321 Ga0501048_0001774
322 Ga0501048_0030637
323 Ga0501068_0007462
324 Ga0501068_0013119
325 Ga0501069_0000817
326 Ga0501069_0004699
327 Ga0501069_0005787
328 Ga0501070_0000298
329 Ga0501070_0000622
330 Ga0501070_0000942
331 Ga0501070_0002170
332 Ga0501070_0008285
333 Ga0501070_0080706
334 Ga0501070_0084764
335 Ga0501070_0124070
336 Ga0501070_0129910
337 Ga0501071_0003838
338 Ga0501071_0011360
339 Ga0501072_0053876
340 Ga0501073_0000574
341 Ga0501073_0147917
342 Ga0501074_0002539
343 Ga0501074_0005003
344 Ga0501075_0051681
345 Ga0501076_0052455
346 Ga0501076_0066473
347 Ga0501077_0001489
348 Ga0501079_0000615
349 Ga0501079_0048684
350 Ga0501080_0000573
351 Ga0501080_0008432
352 Ga0501080_0012199
353 Ga0501080_0012680
354 Ga0501080_0018215
355 Ga0501081_0002594
356 Ga0501083_0000608
357 Ga0501035_0017267
358 Ga0501044_0001366
359 Ga0501044_0002308
360 Ga0501044_0019863
361 Ga0501044_0197627
362 Ga0501045_0008416
363 nmdc:mga03n38_35010_c1
364 nmdc:mga00v17_1177_c1
365 nmdc:mga00v17_68193_c1
366 nmdc:mga0yw44_95465_c1
367 nmdc:mga05p37_180094_c1
368 nmdc:mga05p37_61692_c1
369 nmdc:mga09592_1137_c1
370 nmdc:mga0qj67_39298_c1
371 nmdc:mga06r32_14801_c1
372 nmdc:mga06r32_9149_c1
373 nmdc:mga08y16_20852_c1
374 nmdc:mga0sz30_18810_c1
375 Ga0495595_0037326
376 Ga0500566_0000606
377 Ga0501084_0001510
378 Ga0501084_0020584
379 Ga0530510_0042059
380 2809197532

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

438

513

0.94

PF00501

AMP-binding

AMP-binding enzyme

38

389

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.9306 5 495
3ni2-assembly1.cif.gz_A crystal structures and enzymatic mechanisms of a populus tomentosa 4-coumarate:coa ligase 0.9285 5 494
5u95-assembly1.cif.gz_A structure of the open conformation of 4-coumarate-coa ligase from nicotiana tabacum 0.9231 5 395
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.9204 8 494
5x8g-assembly2.cif.gz_B binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom 0.9179 8 494
ID Description Score Start End Superfamily
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9742 401 460 3.30.300.30
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9505 34 101 3.40.50.980
af_P31686_1_187_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9397 226 397 2.30.38.10
af_Q4D757_69_185_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9388 27 97 3.40.50.980
af_Q7KVU5_528_609_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9384 399 476 3.30.300.30
ID Description Score Start End GO Terms
AF-I6Q2V6-F1-model_v4 4-coumarate--CoA ligase (EC 6.2.1.12) 0.9367 34 390 GO:0016405
AF-A0A7K2NKR7-F1-model_v4 AMP-binding protein 0.9265 1 310 GO:0016405
AF-A0A482VUJ1-F1-model_v4 AMP-binding domain containing protein 0.9248 213 386 GO:0005777
GO:0016405
AF-A0A833G4N5-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9244 4 304 GO:0016874
AF-A0A7V5XE75-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9241 2 381 GO:0004467

Map