F293079

General Info

Members Datasets Scaffolds Average Seq Length
190 117 380 235

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0065661|Ga0496115_0065661_721_1539
Length 272
Sequence MNPRSKKRITEHGLPRRIPLKREKAGTRNTLPFVLMNMAITADGKIATANRAISSFGSQRDKDHLLEIRATADAVMCGAGTINSAPITLGPGPTKYRRARIRRGLAEYNLRIIVSGSGAVNAKAEIFKHKTSPILILTTARISAFKLKELQSVATKVKILGAREIDFHKALHWLREKWKVKRLLCEGGGELNDALFRAGLVNELHLTLCPKIFGGRTAPTIAEGTGVAKLADAAQLKLKSMKRIGDELFAVYEVFSSTHRASNQSRSAKRLR

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
57 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
61 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
74 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
79 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
94 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
116 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.58
Nodule 0
Rhizoplane 0.53
Rhizosphere 97.89
Stem 0
Stem Tuber 0
Unclassified 13.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0065661 3300048918 Bacteria 2931
2 Ga0070658_10008143 3300005327 Bacteria 8430
3 Ga0070658_10437561 3300005327 Bacteria 1126
4 Ga0070683_100449666 3300005329 Bacteria 1229
5 Ga0070670_100044560 3300005331 Unclassified 3814
6 Ga0070670_100255143 3300005331 Bacteria 1528
7 Ga0070680_100209139 3300005336 Bacteria 1646
8 Ga0068868_100176701 3300005338 Unclassified 1770
9 Ga0070689_100300640 3300005340 Bacteria 1336
10 Ga0070689_100526337 3300005340 Bacteria 1016
11 Ga0070669_100528452 3300005353 Unclassified 981
12 Ga0070671_100506594 3300005355 Unclassified 1039
13 Ga0070688_100003122 3300005365 Bacteria 8468
14 Ga0070688_100324850 3300005365 Unclassified 1119
15 Ga0070703_10027465 3300005406 Unclassified 1696
16 Ga0070714_100001788 3300005435 Bacteria 15659
17 Ga0070694_100590514 3300005444 Bacteria 893
18 Ga0070708_100275546 3300005445 Bacteria 1583
19 Ga0070679_100072798 3300005530 Bacteria 3429
20 Ga0070679_100717987 3300005530 Bacteria 942
21 Ga0070695_100062938 3300005545 Unclassified 2410
22 Ga0068855_100002222 3300005563 Bacteria 24018
23 Ga0068855_100073708 3300005563 Bacteria 3966
24 Ga0068855_100876180 3300005563 Bacteria 950
25 Ga0068856_100269563 3300005614 Bacteria 1718
26 Ga0070702_100443967 3300005615 Bacteria 939
27 Ga0068859_100826067 3300005617 Bacteria 1013
28 Ga0068858_100113893 3300005842 Bacteria 2526
29 Ga0068860_100062825 3300005843 Bacteria 3529
30 Ga0081455_10075841 3300005937 Bacteria 2772
31 Ga0075366_10201218 3300006195 Bacteria 1211
32 Ga0097621_100290272 3300006237 Bacteria 1442
33 Ga0068871_100127820 3300006358 Bacteria 2152
34 Ga0075429_100143119 3300006880 Bacteria 2093
35 Ga0097620_100826142 3300006931 Bacteria 1013
36 Ga0075435_100337520 3300007076 Bacteria 1291
37 Ga0105240_10059364 3300009093 Bacteria 4774
38 Ga0105240_10114261 3300009093 Bacteria 3261
39 Ga0105240_10157651 3300009093 Bacteria 2698
40 Ga0105240_10396635 3300009093 Bacteria 1555
41 Ga0105242_10313518 3300009176 Bacteria 1436
42 Ga0105248_10875532 3300009177 Bacteria 1014
43 Ga0105237_10018633 3300009545 Bacteria 7178
44 Ga0105238_10008615 3300009551 Bacteria 10206
45 Ga0105238_10107782 3300009551 Bacteria 2766
46 Ga0105249_10616919 3300009553 Bacteria 1140
47 Ga0105239_10104854 3300010375 Bacteria 3131
48 Ga0105239_10282305 3300010375 Bacteria 1869
49 Ga0157370_10051835 3300013104 Bacteria 3919
50 Ga0157378_11086060 3300013297 Unclassified 837
51 Ga0163163_10084969 3300014325 Bacteria 3172
52 Ga0207705_10008680 3300025909 Bacteria 7404
53 Ga0207707_10333144 3300025912 Unclassified 1309
54 Ga0207695_10117399 3300025913 Bacteria 2633
55 Ga0207695_10301445 3300025913 Bacteria 1494
56 Ga0207695_10427237 3300025913 Bacteria 1209
57 Ga0207671_10011538 3300025914 Bacteria 7178
58 Ga0207652_10145610 3300025921 Bacteria 2120
59 Ga0207652_10415137 3300025921 Bacteria 1214
60 Ga0207694_10057283 3300025924 Bacteria 3029
61 Ga0207694_10157632 3300025924 Bacteria 1832
62 Ga0207650_10104616 3300025925 Unclassified 2184
63 Ga0207664_10010158 3300025929 Bacteria 6643
64 Ga0207661_10492066 3300025944 Bacteria 1120
65 Ga0207667_10002294 3300025949 Bacteria 24044
66 Ga0207667_10115956 3300025949 Bacteria 2760
67 Ga0207667_10218605 3300025949 Bacteria 1952
68 Ga0207667_10650831 3300025949 Bacteria 1059
69 Ga0207677_10270528 3300026023 Bacteria 1390
70 Ga0207703_10095344 3300026035 Bacteria 2510
71 Ga0207708_10607211 3300026075 Bacteria 927
72 Ga0207702_10285376 3300026078 Bacteria 1562
73 Ga0207675_100231388 3300026118 Bacteria 1783
74 Ga0268266_10248051 3300028379 Bacteria 1646
75 Ga0265337_1000077 3300028556 Bacteria 46215
76 Ga0265337_1001501 3300028556 Bacteria 11453
77 Ga0265337_1009134 3300028556 Bacteria 3558
78 Ga0265337_1028711 3300028556 Bacteria 1668
79 Ga0265326_10061380 3300028558 Bacteria 1063
80 Ga0265319_1010390 3300028563 Bacteria 3888
81 Ga0265334_10036941 3300028573 Bacteria 1927
82 Ga0265334_10050069 3300028573 Bacteria 1606
83 Ga0265334_10079252 3300028573 Bacteria 1212
84 Ga0265323_10000058 3300028653 Bacteria 61416
85 Ga0265323_10012625 3300028653 Bacteria 3382
86 Ga0265323_10053361 3300028653 Bacteria 1427
87 Ga0265322_10007570 3300028654 Unclassified 3166
88 Ga0265336_10002061 3300028666 Bacteria 8557
89 Ga0265336_10014196 3300028666 Bacteria 2642
90 Ga0265336_10022233 3300028666 Bacteria 2020
91 Ga0265336_10088841 3300028666 Bacteria 921
92 Ga0265338_10000276 3300028800 Bacteria 93585
93 Ga0265338_10000439 3300028800 Bacteria 74770
94 Ga0265338_10002267 3300028800 Bacteria 29297
95 Ga0265338_10002771 3300028800 Bacteria 25646
96 Ga0265338_10004206 3300028800 Bacteria 19630
97 Ga0265338_10004557 3300028800 Bacteria 18651
98 Ga0265338_10004765 3300028800 Bacteria 18132
99 Ga0265338_10005909 3300028800 Bacteria 15775
100 Ga0265338_10049692 3300028800 Bacteria 3798
101 Ga0265338_10089123 3300028800 Unclassified 2558
102 Ga0265338_10138981 3300028800 Bacteria 1905
103 Ga0265338_10260046 3300028800 Bacteria 1276
104 Ga0265338_10269748 3300028800 Bacteria 1247
105 Ga0265338_10434792 3300028800 Bacteria 931
106 Ga0265324_10020399 3300029957 Bacteria 2382
107 Ga0265324_10046466 3300029957 Bacteria 1494
108 Ga0265320_10000242 3300031240 Bacteria 45162
109 Ga0265320_10000364 3300031240 Bacteria 36776
110 Ga0265320_10038119 3300031240 Bacteria 2414
111 Ga0265320_10052154 3300031240 Bacteria 1982
112 Ga0265320_10076629 3300031240 Bacteria 1566
113 Ga0265320_10103089 3300031240 Bacteria 1313
114 Ga0265320_10127736 3300031240 Bacteria 1156
115 Ga0265325_10006938 3300031241 Bacteria 6834
116 Ga0265325_10012831 3300031241 Bacteria 4781
117 Ga0265340_10000246 3300031247 Bacteria 28156
118 Ga0265339_10011911 3300031249 Bacteria 5331
119 Ga0265316_10001480 3300031344 Bacteria 25164
120 Ga0265316_10057971 3300031344 Bacteria 3018
121 Ga0265316_10376149 3300031344 Bacteria 1025
122 Ga0265313_10002951 3300031595 Bacteria 14195
123 Ga0265313_10080547 3300031595 Bacteria 1479
124 Ga0265313_10117817 3300031595 Bacteria 1161
125 Ga0265314_10215306 3300031711 Bacteria 1125
126 Ga0265342_10011189 3300031712 Bacteria 6158
127 Ga0373926_0053655 3300035083 Bacteria 1459
128 Ga0373951_0023376 3300035091 Bacteria 1427
129 Ga0373953_0149576 3300035117 Unclassified 1001
130 Ga0373954_0001248 3300035118 Bacteria 10248
131 Ga0373956_0007923 3300035119 Bacteria 4288
132 Ga0373943_0103453 3300035170 Bacteria 1493
133 Ga0373946_0036800 3300035171 Bacteria 1987
134 Ga0316574_0182928 3300035398 Bacteria 1348
135 Ga0373935_0009542 3300035692 Bacteria 5808
136 Ga0373935_0052444 3300035692 Bacteria 2593
137 Ga0373927_0008765 3300035695 Bacteria 6796
138 Ga0373933_0017506 3300035724 Bacteria 4020
139 Ga0373947_0007337 3300035725 Bacteria 6383
140 Ga0373937_0001257 3300036401 Bacteria 21283
141 Ga0373925_0001940 3300037068 Bacteria 17113
142 Ga0373925_0041215 3300037068 Unclassified 3422
143 Ga0373925_0231391 3300037068 Bacteria 1478
144 Ga0451577_0001244 3300042876 Bacteria 35254
145 Ga0451577_0080054 3300042876 Bacteria 2913
146 Ga0451577_0170127 3300042876 Unclassified 1963
147 Ga0451577_0615474 3300042876 Bacteria 985
148 Ga0453683_0204255 3300044673 Bacteria 1255
149 Ga0453684_0013158 3300044712 Bacteria 13492
150 Ga0453684_0569254 3300044712 Unclassified 1246
151 Ga0451576_0031681 3300045051 Bacteria 5636
152 Ga0451576_0044526 3300045051 Bacteria 4679
153 Ga0451576_0108688 3300045051 Bacteria 2886
154 Ga0451576_0304826 3300045051 Bacteria 1666
155 Ga0451576_0334075 3300045051 Bacteria 1586
156 Ga0495592_0096894 3300046454 Bacteria 2108
157 Ga0495629_0071175 3300046459 Unclassified 2427
158 Ga0495639_0226947 3300046475 Unclassified 919
159 Ga0495618_0002290 3300046514 Bacteria 12403
160 Ga0495630_0000073 3300046517 Bacteria 79321
161 Ga0495630_0036430 3300046517 Unclassified 3678
162 Ga0495630_0220150 3300046517 Bacteria 1449
163 Ga0495666_0058043 3300046526 Unclassified 1852
164 Ga0495640_0081324 3300046533 Unclassified 2153
165 Ga0495586_0000040 3300046535 Bacteria 79335
166 Ga0495586_0000548 3300046535 Bacteria 21893
167 Ga0495667_0028593 3300046559 Bacteria 3755
168 Ga0495634_0015816 3300046642 Bacteria 5409
169 Ga0495634_0129527 3300046642 Bacteria 1609
170 Ga0495635_0094503 3300046663 Bacteria 2044
171 Ga0495635_0532169 3300046663 Bacteria 772
172 Ga0495658_0132378 3300046683 Unclassified 1519
173 Ga0495613_0003977 3300046689 Bacteria 11062
174 Ga0495613_0049251 3300046689 Bacteria 3110
175 Ga0495674_0002615 3300047319 Bacteria 17520
176 Ga0495676_0006224 3300047321 Bacteria 10981
177 Ga0495680_0006547 3300047322 Bacteria 10810
178 Ga0495684_0109209 3300047471 Unclassified 2089
179 Ga0495614_0116869 3300048089 Unclassified 1174
180 Ga0501033_0052641 3300049570 Bacteria 3017
181 Ga0501033_0316883 3300049570 Bacteria 1096
182 Ga0501034_0617456 3300049571 Unclassified 988
183 Ga0501043_0061197 3300049579 Bacteria 2957
184 Ga0501047_0197957 3300049581 Bacteria 1871
185 Ga0501080_0008250 3300049742 Bacteria 9434
186 Ga0501044_0107976 3300049823 Bacteria 2794
187 nmdc:mga0k408_136934_c1 3300050493 Bacteria 1455
188 nmdc:mga0k408_153755_c1 3300050493 Unclassified 1370
189 nmdc:mga09592_11559_c1 3300050508 Bacteria 7180
190 nmdc:mga0rr50_319309_c1 3300050513 Bacteria 1302
191 Ga0496115_0065661
192 Ga0070658_10008143
193 Ga0070658_10437561
194 Ga0070683_100449666
195 Ga0070670_100044560
196 Ga0070670_100255143
197 Ga0070680_100209139
198 Ga0068868_100176701
199 Ga0070689_100300640
200 Ga0070689_100526337
201 Ga0070669_100528452
202 Ga0070671_100506594
203 Ga0070688_100003122
204 Ga0070688_100324850
205 Ga0070703_10027465
206 Ga0070714_100001788
207 Ga0070694_100590514
208 Ga0070708_100275546
209 Ga0070679_100072798
210 Ga0070679_100717987
211 Ga0070695_100062938
212 Ga0068855_100002222
213 Ga0068855_100073708
214 Ga0068855_100876180
215 Ga0068856_100269563
216 Ga0070702_100443967
217 Ga0068859_100826067
218 Ga0068858_100113893
219 Ga0068860_100062825
220 Ga0081455_10075841
221 Ga0075366_10201218
222 Ga0097621_100290272
223 Ga0068871_100127820
224 Ga0075429_100143119
225 Ga0097620_100826142
226 Ga0075435_100337520
227 Ga0105240_10059364
228 Ga0105240_10114261
229 Ga0105240_10157651
230 Ga0105240_10396635
231 Ga0105242_10313518
232 Ga0105248_10875532
233 Ga0105237_10018633
234 Ga0105238_10008615
235 Ga0105238_10107782
236 Ga0105249_10616919
237 Ga0105239_10104854
238 Ga0105239_10282305
239 Ga0157370_10051835
240 Ga0157378_11086060
241 Ga0163163_10084969
242 Ga0207705_10008680
243 Ga0207707_10333144
244 Ga0207695_10117399
245 Ga0207695_10301445
246 Ga0207695_10427237
247 Ga0207671_10011538
248 Ga0207652_10145610
249 Ga0207652_10415137
250 Ga0207694_10057283
251 Ga0207694_10157632
252 Ga0207650_10104616
253 Ga0207664_10010158
254 Ga0207661_10492066
255 Ga0207667_10002294
256 Ga0207667_10115956
257 Ga0207667_10218605
258 Ga0207667_10650831
259 Ga0207677_10270528
260 Ga0207703_10095344
261 Ga0207708_10607211
262 Ga0207702_10285376
263 Ga0207675_100231388
264 Ga0268266_10248051
265 Ga0265337_1000077
266 Ga0265337_1001501
267 Ga0265337_1009134
268 Ga0265337_1028711
269 Ga0265326_10061380
270 Ga0265319_1010390
271 Ga0265334_10036941
272 Ga0265334_10050069
273 Ga0265334_10079252
274 Ga0265323_10000058
275 Ga0265323_10012625
276 Ga0265323_10053361
277 Ga0265322_10007570
278 Ga0265336_10002061
279 Ga0265336_10014196
280 Ga0265336_10022233
281 Ga0265336_10088841
282 Ga0265338_10000276
283 Ga0265338_10000439
284 Ga0265338_10002267
285 Ga0265338_10002771
286 Ga0265338_10004206
287 Ga0265338_10004557
288 Ga0265338_10004765
289 Ga0265338_10005909
290 Ga0265338_10049692
291 Ga0265338_10089123
292 Ga0265338_10138981
293 Ga0265338_10260046
294 Ga0265338_10269748
295 Ga0265338_10434792
296 Ga0265324_10020399
297 Ga0265324_10046466
298 Ga0265320_10000242
299 Ga0265320_10000364
300 Ga0265320_10038119
301 Ga0265320_10052154
302 Ga0265320_10076629
303 Ga0265320_10103089
304 Ga0265320_10127736
305 Ga0265325_10006938
306 Ga0265325_10012831
307 Ga0265340_10000246
308 Ga0265339_10011911
309 Ga0265316_10001480
310 Ga0265316_10057971
311 Ga0265316_10376149
312 Ga0265313_10002951
313 Ga0265313_10080547
314 Ga0265313_10117817
315 Ga0265314_10215306
316 Ga0265342_10011189
317 Ga0373926_0053655
318 Ga0373951_0023376
319 Ga0373953_0149576
320 Ga0373954_0001248
321 Ga0373956_0007923
322 Ga0373943_0103453
323 Ga0373946_0036800
324 Ga0316574_0182928
325 Ga0373935_0009542
326 Ga0373935_0052444
327 Ga0373927_0008765
328 Ga0373933_0017506
329 Ga0373947_0007337
330 Ga0373937_0001257
331 Ga0373925_0001940
332 Ga0373925_0041215
333 Ga0373925_0231391
334 Ga0451577_0001244
335 Ga0451577_0080054
336 Ga0451577_0170127
337 Ga0451577_0615474
338 Ga0453683_0204255
339 Ga0453684_0013158
340 Ga0453684_0569254
341 Ga0451576_0031681
342 Ga0451576_0044526
343 Ga0451576_0108688
344 Ga0451576_0304826
345 Ga0451576_0334075
346 Ga0495592_0096894
347 Ga0495629_0071175
348 Ga0495639_0226947
349 Ga0495618_0002290
350 Ga0495630_0000073
351 Ga0495630_0036430
352 Ga0495630_0220150
353 Ga0495666_0058043
354 Ga0495640_0081324
355 Ga0495586_0000040
356 Ga0495586_0000548
357 Ga0495667_0028593
358 Ga0495634_0015816
359 Ga0495634_0129527
360 Ga0495635_0094503
361 Ga0495635_0532169
362 Ga0495658_0132378
363 Ga0495613_0003977
364 Ga0495613_0049251
365 Ga0495674_0002615
366 Ga0495676_0006224
367 Ga0495680_0006547
368 Ga0495684_0109209
369 Ga0495614_0116869
370 Ga0501033_0052641
371 Ga0501033_0316883
372 Ga0501034_0617456
373 Ga0501043_0061197
374 Ga0501047_0197957
375 Ga0501080_0008250
376 Ga0501044_0107976
377 nmdc:mga0k408_136934_c1
378 nmdc:mga0k408_153755_c1
379 nmdc:mga09592_11559_c1
380 nmdc:mga0rr50_319309_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

32

250

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b3z-assembly1.cif.gz_B crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis 0.8859 8 230
5xv0-assembly1.cif.gz_A crystal structure of rib7 mutant d33n from methanosarcina mazei 0.8763 1 231
5xux-assembly3.cif.gz_F crystal structure of rib7 from methanosarcina mazei 0.8762 1 231
5xv0-assembly3.cif.gz_E crystal structure of rib7 mutant d33n from methanosarcina mazei 0.8756 8 229
5xv2-assembly1.cif.gz_A-2 crystal structure of rib7 mutant d33a from methanosarcina mazei 0.8755 8 229
ID Description Score Start End Superfamily
2b3zA02 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8824 8 230 3.40.430.10
5xuxB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.874 8 229 3.40.430.10
5xuxB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8592 8 229 3.40.430.10
3zpgA02 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8543 3 230 3.40.430.10
2aznF00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8531 6 229 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A2V5QDC5-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9859 35 178 GO:0008703
GO:0009231
AF-A0A2V5QDC5-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9791 35 178 GO:0008703
GO:0009231
AF-A0A2V5T9Z7-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9762 17 164 GO:0008703
GO:0009231
AF-A0A2V5T9Z7-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9698 17 164 GO:0008703
GO:0009231
AF-A0A2V5SMD0-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.967 17 147 GO:0008703
GO:0009231

Map