F293024

General Info

Members Datasets Scaffolds Average Seq Length
190 150 186 276

Family's Representative Sequence

Representative Sequence 3300046663|Ga0495635_0251959|Ga0495635_0251959_146_1108
Length 320
Sequence MYHAGPRSLAKGDKKVPELDQSGVADSGRPGHTSAGKEMPRMTMIAATRTELDAPYALAPGKIRFYRENGFVTLKNVFSAETLAAYAPEITRKVHELNTLHLPMEQRTTYQKAFLQVMNLWTKSDVVKEFVFSKRLARIASELMGTTGVRMYHDQALYKEGKGGFTPWHADQYYWPLASTHTVTVWIPLQKTPMELGPLAFAPKSHRHDLGRDLEISDQSEAKIEKKLLAANLGQVEEPFELGEVSFHSGWTFHRAGRNLSDRPREVMTVIYMDEDMKLAAPRNENQQNDWDTWCPGAKVGELINTAINPVLWSSRGIRH

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
3 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
4 2862574272 Streptomyces sp. AcE210 Isolate Nodule
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
135 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
136 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
137 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
138 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
139 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
140 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
143 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 0
Isolates 2.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.58
Nodule 0.53
Rhizoplane 1.05
Rhizosphere 90.53
Stem 0
Stem Tuber 0
Unclassified 6.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10004424 3300003316 Bacteria 24003
2 rootH2_10008311 3300003320 Bacteria 41685
3 rootL2_10011859 3300003322 Bacteria 18629
4 rootH1_10006036 3300003323 Bacteria 32132
5 Ga0065712_10079637 3300005290 Bacteria 3179
6 Ga0065715_10097477 3300005293 Unclassified 3698
7 Ga0065707_10150321 3300005295 Bacteria 1664
8 Ga0070658_10023898 3300005327 Bacteria 4902
9 Ga0070658_10232793 3300005327 Bacteria 1560
10 Ga0070658_10314874 3300005327 Bacteria 1336
11 Ga0070676_10025026 3300005328 Unclassified 3370
12 Ga0070689_100032970 3300005340 Unclassified 3944
13 Ga0070687_100255979 3300005343 Bacteria 1090
14 Ga0070668_100034792 3300005347 Unclassified 3840
15 Ga0070668_100079551 3300005347 Bacteria 2567
16 Ga0070668_100425961 3300005347 Bacteria 1137
17 Ga0070669_100016630 3300005353 Bacteria 5250
18 Ga0070675_100008578 3300005354 Bacteria 7934
19 Ga0070675_100032625 3300005354 Bacteria 4215
20 Ga0070671_100102697 3300005355 Bacteria 2399
21 Ga0070673_100137593 3300005364 Unclassified 2057
22 Ga0070714_100012580 3300005435 Bacteria 6760
23 Ga0070700_100081993 3300005441 Unclassified 2085
24 Ga0070663_100021835 3300005455 Bacteria 4265
25 Ga0070662_100041790 3300005457 Unclassified 3273
26 Ga0068867_100080482 3300005459 Unclassified 2453
27 Ga0070707_100056546 3300005468 Bacteria 3763
28 Ga0070679_100143732 3300005530 Bacteria 2364
29 Ga0070684_100006749 3300005535 Bacteria 8899
30 Ga0068853_100096033 3300005539 Bacteria 2615
31 Ga0070672_100011839 3300005543 Bacteria 6094
32 Ga0070686_100351287 3300005544 Bacteria 1108
33 Ga0070665_100000399 3300005548 Bacteria 63817
34 Ga0070665_100050161 3300005548 Bacteria 4188
35 Ga0070704_100113824 3300005549 Unclassified 2064
36 Ga0068855_100018913 3300005563 Bacteria 8280
37 Ga0068855_100024742 3300005563 Bacteria 7183
38 Ga0068855_100102541 3300005563 Bacteria 3293
39 Ga0068857_100213272 3300005577 Bacteria 1762
40 Ga0068854_100036984 3300005578 Bacteria 3424
41 Ga0068854_100089547 3300005578 Unclassified 2287
42 Ga0068854_100108931 3300005578 Bacteria 2087
43 Ga0068856_100152511 3300005614 Bacteria 2320
44 Ga0068856_100179484 3300005614 Bacteria 2130
45 Ga0068852_100093621 3300005616 Bacteria 2694
46 Ga0068859_100023773 3300005617 Bacteria 6151
47 Ga0068864_100278646 3300005618 Bacteria 1560
48 Ga0068864_100432994 3300005618 Bacteria 1255
49 Ga0068861_100007965 3300005719 Bacteria 7293
50 Ga0068870_10021150 3300005840 Unclassified 3178
51 Ga0068863_100099275 3300005841 Unclassified 2766
52 Ga0068860_100001213 3300005843 Bacteria 28133
53 Ga0068860_100245228 3300005843 Bacteria 1743
54 Ga0068862_100060080 3300005844 Unclassified 3264
55 Ga0081455_10007223 3300005937 Bacteria 11734
56 Ga0081539_10004129 3300005985 Bacteria 16528
57 Ga0075428_100227590 3300006844 Bacteria 2013
58 Ga0097620_100023771 3300006931 Bacteria 6151
59 Ga0105240_10002719 3300009093 Bacteria 28052
60 Ga0111539_10002347 3300009094 Bacteria 25205
61 Ga0114129_10003066 3300009147 Bacteria 23441
62 Ga0105241_10002555 3300009174 Bacteria 13665
63 Ga0105237_10301354 3300009545 Bacteria 1606
64 Ga0105237_10404075 3300009545 Bacteria 1370
65 Ga0105238_10013010 3300009551 Bacteria 8398
66 Ga0105239_10066848 3300010375 Bacteria 3949
67 Ga0105239_10072148 3300010375 Bacteria 3795
68 Ga0157373_10030205 3300013100 Bacteria 3899
69 Ga0157370_10000860 3300013104 Bacteria 38540
70 Ga0157370_10318049 3300013104 Bacteria 1436
71 Ga0157369_10119136 3300013105 Bacteria 2802
72 Ga0157369_10391903 3300013105 Bacteria 1441
73 Ga0157374_10054963 3300013296 Bacteria 3715
74 Ga0157374_10305053 3300013296 Bacteria 1576
75 Ga0163162_10448315 3300013306 Bacteria 1422
76 Ga0157375_10009316 3300013308 Bacteria 8620
77 Ga0157377_10000609 3300014745 Bacteria 14822
78 Ga0213876_10024240 3300021384 Bacteria 3202
79 Ga0213876_10039475 3300021384 Bacteria 2494
80 Ga0207647_10007010 3300025904 Bacteria 8172
81 Ga0207647_10094114 3300025904 Bacteria 1785
82 Ga0207643_10019385 3300025908 Unclassified 3727
83 Ga0207705_10008455 3300025909 Bacteria 7513
84 Ga0207654_10392385 3300025911 Unclassified 963
85 Ga0207695_10000110 3300025913 Bacteria 250079
86 Ga0207695_10002730 3300025913 Bacteria 25761
87 Ga0207695_10300445 3300025913 Bacteria 1497
88 Ga0207671_10001720 3300025914 Bacteria 24663
89 Ga0207671_10086514 3300025914 Bacteria 2356
90 Ga0207671_10243962 3300025914 Bacteria 1411
91 Ga0207646_10061850 3300025922 Bacteria 3342
92 Ga0207694_10004834 3300025924 Bacteria 10455
93 Ga0207650_10120053 3300025925 Unclassified 2045
94 Ga0207659_10064095 3300025926 Unclassified 2658
95 Ga0207644_10080121 3300025931 Bacteria 2411
96 Ga0207706_10039831 3300025933 Unclassified 4166
97 Ga0207670_10021911 3300025936 Unclassified 3950
98 Ga0207661_10056336 3300025944 Bacteria 3155
99 Ga0207667_10015210 3300025949 Bacteria 8749
100 Ga0207667_10097030 3300025949 Bacteria 3042
101 Ga0207651_10042058 3300025960 Unclassified 3038
102 Ga0207668_10010816 3300025972 Bacteria 5528
103 Ga0207668_10184067 3300025972 Bacteria 1650
104 Ga0207668_10376442 3300025972 Bacteria 1194
105 Ga0207640_10027575 3300025981 Bacteria 3462
106 Ga0207639_10073143 3300026041 Bacteria 2686
107 Ga0207678_10034723 3300026067 Bacteria 4392
108 Ga0207708_10041488 3300026075 Unclassified 3508
109 Ga0207702_10052924 3300026078 Bacteria 3437
110 Ga0207702_10198047 3300026078 Bacteria 1860
111 Ga0207641_10444324 3300026088 Archaea 1252
112 Ga0207648_10143506 3300026089 Unclassified 2105
113 Ga0207676_10271167 3300026095 Bacteria 1537
114 Ga0207674_10016792 3300026116 Bacteria 8002
115 Ga0207675_100001377 3300026118 Bacteria 24367
116 Ga0268266_10001144 3300028379 Bacteria 32940
117 Ga0268266_10056009 3300028379 Bacteria 3391
118 Ga0268265_10021726 3300028380 Unclassified 4499
119 Ga0268264_10000692 3300028381 Bacteria 39202
120 Ga0307408_100115853 3300031548 Bacteria 2067
121 Ga0265314_10009673 3300031711 Bacteria 8117
122 Ga0265314_10016857 3300031711 Bacteria 5757
123 Ga0307413_10013661 3300031824 Bacteria 4092
124 Ga0307410_10015316 3300031852 Bacteria 4545
125 Ga0307406_10185055 3300031901 Bacteria 1520
126 Ga0307416_100019459 3300032002 Bacteria 4814
127 Ga0307411_10162177 3300032005 Bacteria 1676
128 Ga0307415_100026190 3300032126 Bacteria 3674
129 Ga0307507_10188781 3300033179 Bacteria 1454
130 Ga0373945_0088663 3300035116 Bacteria 1195
131 Ga0395900_0428445 3300037418 Bacteria 1282
132 Ga0436364_1555499 3300037853 Bacteria 5551
133 Ga0436365_1369387 3300039437 Bacteria 2412
134 Ga0436365_1529613 3300039437 Bacteria 11525
135 Ga0436363_1388921 3300039450 Bacteria 3110
136 Ga0436362_0300622 3300039453 Unclassified 4482
137 Ga0451793_0644470 3300041452 Bacteria 2652
138 Ga0451577_0081711 3300042876 Bacteria 2882
139 Ga0451577_0208557 3300042876 Unclassified 1765
140 Ga0453683_0114211 3300044673 Bacteria 1699
141 Ga0453684_0295436 3300044712 Bacteria 1843
142 Ga0451576_0003521 3300045051 Bacteria 21380
143 Ga0466967_0310660 3300045976 Unclassified 1518
144 Ga0495603_0011242 3300046455 Bacteria 5422
145 Ga0495651_0013581 3300046462 Bacteria 6296
146 Ga0495585_0029783 3300046492 Bacteria 3106
147 Ga0495585_0047642 3300046492 Bacteria 2387
148 Ga0495628_0026099 3300046516 Bacteria 4769
149 Ga0495628_0034364 3300046516 Bacteria 4078
150 Ga0495630_0091496 3300046517 Bacteria 2298
151 Ga0495630_0214588 3300046517 Bacteria 1469
152 Ga0495643_0065088 3300046522 Bacteria 1925
153 Ga0495652_0029215 3300046529 Bacteria 4844
154 Ga0495640_0106724 3300046533 Bacteria 1834
155 Ga0495622_0057668 3300046557 Bacteria 1800
156 Ga0495634_0116125 3300046642 Bacteria 1717
157 Ga0495635_0251959 3300046663 Bacteria 1190
158 Ga0495647_0062413 3300046681 Unclassified 1473
159 Ga0495604_0058918 3300047317 Bacteria 2947
160 Ga0495676_0014310 3300047321 Bacteria 7099
161 Ga0495676_0023442 3300047321 Bacteria 5358
162 Ga0495676_0209457 3300047321 Bacteria 1349
163 Ga0495675_0029473 3300047444 Bacteria 3501
164 Ga0496109_0580066 3300048912 Bacteria 1057
165 Ga0496117_0000034 3300048920 Bacteria 328334
166 Ga0501070_0083180 3300049586 Bacteria 2650
167 Ga0501202_000369 3300049652 Bacteria 6236
168 Ga0501209_000751 3300049656 Bacteria 4115
169 Ga0501217_003961 3300049661 Bacteria 3023
170 Ga0501242_014680 3300049674 Bacteria 971
171 Ga0501221_004044 3300049704 Bacteria 2424
172 Ga0501225_0019677 3300049705 Bacteria 1867
173 Ga0501225_0060152 3300049705 Bacteria 1068
174 Ga0501245_025822 3300049708 Bacteria 946
175 Ga0501083_0047713 3300049744 Bacteria 2893
176 Ga0501266_005217 3300049763 Bacteria 1619
177 Ga0501274_002035 3300049771 Bacteria 1568
178 nmdc:mga05p37_9463_c1 3300050507 Bacteria 11535
179 nmdc:mga08y16_1109416_c1 3300050511 Bacteria 766
180 nmdc:mga08y16_22358_c1 3300050511 Bacteria 6674
181 nmdc:mga08y16_9704_c1 3300050511 Bacteria 10107
182 nmdc:mga0a205_138552_c1 3300050515 Bacteria 2333
183 Ga0495601_0080541 3300053077 Bacteria 2089
184 Ga0500555_000024 3300053103 Bacteria 134279
185 Ga0500595_037283 3300053119 Bacteria 1587
186 Ga0500645_052091 3300053730 Bacteria 1193

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_1109416_c1 nmdc:mga08y16_1109416_c1_17_709 213
2 3300046492 Ga0495585_0029783 Ga0495585_0029783_428_1195 236
3 3300013296 Ga0157374_10305053 Ga0157374_103050532 246
4 3300005843 Ga0068860_100001213 Ga0068860_1000012134 248
5 3300026078 Ga0207702_10198047 Ga0207702_101980472 248
6 3300028381 Ga0268264_10000692 Ga0268264_1000069232 248
7 3300041452 Ga0451793_0644470 Ga0451793_0644470_983_1783 248
8 3300037853 Ga0436364_1555499 Ga0436364_1555499_2594_3397 250
9 3300039450 Ga0436363_1388921 Ga0436363_1388921_1725_2528 250
10 3300005530 Ga0070679_100143732 Ga0070679_1001437322 251
11 3300005539 Ga0068853_100096033 Ga0068853_1000960332 251
12 3300005563 Ga0068855_100102541 Ga0068855_1001025412 251
13 3300009545 Ga0105237_10301354 Ga0105237_103013542 251
14 3300025913 Ga0207695_10300445 Ga0207695_103004452 251
15 3300025914 Ga0207671_10086514 Ga0207671_100865142 251
16 3300025949 Ga0207667_10097030 Ga0207667_100970302 251
17 3300026041 Ga0207639_10073143 Ga0207639_100731432 251
18 3300005618 Ga0068864_100432994 Ga0068864_1004329942 252
19 3300026095 Ga0207676_10271167 Ga0207676_102711672 252
20 3300046516 Ga0495628_0034364 Ga0495628_0034364_260_1072 252
21 3300005435 Ga0070714_100012580 Ga0070714_1000125807 253
22 3300009545 Ga0105237_10404075 Ga0105237_104040751 253
23 iso_pu_bacteria 2515154155 2515856421 253
24 iso_pu_bacteria 2818991472 2819745262 253
25 3300009147 Ga0114129_10003066 Ga0114129_100030664 254
26 3300048912 Ga0496109_0580066 Ga0496109_0580066_201_1025 254
27 3300048920 Ga0496117_0000034 Ga0496117_0000034_153888_154703 254
28 3300050507 nmdc:mga05p37_9463_c1 nmdc:mga05p37_9463_c1_4942_5769 254
29 iso_pu_bacteria 2862290372 2862291887 254
30 iso_pu_bacteria 2862574272 2862581703 254
31 3300005354 Ga0070675_100032625 Ga0070675_1000326252 255
32 3300005548 Ga0070665_100000399 Ga0070665_10000039941 255
33 3300005841 Ga0068863_100099275 Ga0068863_1000992754 255
34 3300025911 Ga0207654_10392385 Ga0207654_103923851 255
35 3300026088 Ga0207641_10444324 Ga0207641_104443241 255
36 3300028379 Ga0268266_10001144 Ga0268266_1000114424 255
37 3300035116 Ga0373945_0088663 Ga0373945_0088663_90_911 255
38 3300046517 Ga0495630_0091496 Ga0495630_0091496_786_1607 255
39 3300046642 Ga0495634_0116125 Ga0495634_0116125_538_1359 255
40 3300049705 Ga0501225_0060152 Ga0501225_0060152_46_864 255
41 3300005327 Ga0070658_10314874 Ga0070658_103148741 256
42 3300005535 Ga0070684_100006749 Ga0070684_1000067492 256
43 3300005563 Ga0068855_100018913 Ga0068855_1000189136 256
44 3300005577 Ga0068857_100213272 Ga0068857_1002132722 256
45 3300005578 Ga0068854_100108931 Ga0068854_1001089312 256
46 3300005614 Ga0068856_100152511 Ga0068856_1001525112 256
47 3300005843 Ga0068860_100245228 Ga0068860_1002452281 256
48 3300005937 Ga0081455_10007223 Ga0081455_100072236 256
49 3300005985 Ga0081539_10004129 Ga0081539_100041295 256
50 3300006844 Ga0075428_100227590 Ga0075428_1002275902 256
51 3300009093 Ga0105240_10002719 Ga0105240_100027194 256
52 3300010375 Ga0105239_10072148 Ga0105239_100721482 256
53 3300013100 Ga0157373_10030205 Ga0157373_100302056 256
54 3300013104 Ga0157370_10318049 Ga0157370_103180492 256
55 3300021384 Ga0213876_10024240 Ga0213876_100242403 256
56 3300025913 Ga0207695_10000110 Ga0207695_10000110134 256
57 3300025944 Ga0207661_10056336 Ga0207661_100563362 256
58 3300025949 Ga0207667_10015210 Ga0207667_100152106 256
59 3300039437 Ga0436365_1369387 Ga0436365_1369387_1429_2250 256
60 3300039453 Ga0436362_0300622 Ga0436362_0300622_3596_4417 256
61 3300046517 Ga0495630_0214588 Ga0495630_0214588_342_1169 256
62 3300053103 Ga0500555_000024 Ga0500555_000024_47784_48605 256
63 3300053119 Ga0500595_037283 Ga0500595_037283_270_1091 256
64 3300021384 Ga0213876_10039475 Ga0213876_100394753 257
65 3300025914 Ga0207671_10243962 Ga0207671_102439622 257
66 3300031711 Ga0265314_10009673 Ga0265314_100096735 257
67 3300039437 Ga0436365_1529613 Ga0436365_1529613_1627_2451 257
68 3300042876 Ga0451577_0081711 Ga0451577_0081711_49_873 257
69 3300042876 Ga0451577_0208557 Ga0451577_0208557_320_1144 257
70 3300049744 Ga0501083_0047713 Ga0501083_0047713_620_1444 257
71 3300053077 Ga0495601_0080541 Ga0495601_0080541_783_1616 257
72 3300005290 Ga0065712_10079637 Ga0065712_100796373 258
73 3300005293 Ga0065715_10097477 Ga0065715_100974772 258
74 3300005327 Ga0070658_10023898 Ga0070658_100238982 258
75 3300005327 Ga0070658_10232793 Ga0070658_102327932 258
76 3300005328 Ga0070676_10025026 Ga0070676_100250264 258
77 3300005340 Ga0070689_100032970 Ga0070689_1000329704 258
78 3300005347 Ga0070668_100034792 Ga0070668_1000347924 258
79 3300005347 Ga0070668_100079551 Ga0070668_1000795512 258
80 3300005353 Ga0070669_100016630 Ga0070669_1000166304 258
81 3300005354 Ga0070675_100008578 Ga0070675_1000085787 258
82 3300005355 Ga0070671_100102697 Ga0070671_1001026972 258
83 3300005364 Ga0070673_100137593 Ga0070673_1001375933 258
84 3300005441 Ga0070700_100081993 Ga0070700_1000819932 258
85 3300005455 Ga0070663_100021835 Ga0070663_1000218352 258
86 3300005457 Ga0070662_100041790 Ga0070662_1000417902 258
87 3300005459 Ga0068867_100080482 Ga0068867_1000804822 258
88 3300005543 Ga0070672_100011839 Ga0070672_1000118397 258
89 3300005548 Ga0070665_100050161 Ga0070665_1000501614 258
90 3300005549 Ga0070704_100113824 Ga0070704_1001138242 258
91 3300005563 Ga0068855_100024742 Ga0068855_1000247425 258
92 3300005578 Ga0068854_100036984 Ga0068854_1000369842 258
93 3300005578 Ga0068854_100089547 Ga0068854_1000895472 258
94 3300005614 Ga0068856_100179484 Ga0068856_1001794842 258
95 3300005616 Ga0068852_100093621 Ga0068852_1000936212 258
96 3300005617 Ga0068859_100023773 Ga0068859_1000237734 258
97 3300005618 Ga0068864_100278646 Ga0068864_1002786462 258
98 3300005719 Ga0068861_100007965 Ga0068861_1000079655 258
99 3300005840 Ga0068870_10021150 Ga0068870_100211503 258
100 3300005844 Ga0068862_100060080 Ga0068862_1000600801 258
101 3300006931 Ga0097620_100023771 Ga0097620_1000237713 258
102 3300009094 Ga0111539_10002347 Ga0111539_100023474 258
103 3300009174 Ga0105241_10002555 Ga0105241_100025559 258
104 3300009551 Ga0105238_10013010 Ga0105238_100130104 258
105 3300010375 Ga0105239_10066848 Ga0105239_100668482 258
106 3300013104 Ga0157370_10000860 Ga0157370_1000086014 258
107 3300013105 Ga0157369_10119136 Ga0157369_101191362 258
108 3300013105 Ga0157369_10391903 Ga0157369_103919032 258
109 3300013296 Ga0157374_10054963 Ga0157374_100549633 258
110 3300013308 Ga0157375_10009316 Ga0157375_100093168 258
111 3300014745 Ga0157377_10000609 Ga0157377_100006094 258
112 3300025904 Ga0207647_10007010 Ga0207647_100070102 258
113 3300025904 Ga0207647_10094114 Ga0207647_100941142 258
114 3300025908 Ga0207643_10019385 Ga0207643_100193852 258
115 3300025909 Ga0207705_10008455 Ga0207705_100084554 258
116 3300025913 Ga0207695_10002730 Ga0207695_100027304 258
117 3300025914 Ga0207671_10001720 Ga0207671_1000172018 258
118 3300025924 Ga0207694_10004834 Ga0207694_100048347 258
119 3300025925 Ga0207650_10120053 Ga0207650_101200532 258
120 3300025926 Ga0207659_10064095 Ga0207659_100640953 258
121 3300025931 Ga0207644_10080121 Ga0207644_100801212 258
122 3300025933 Ga0207706_10039831 Ga0207706_100398313 258
123 3300025936 Ga0207670_10021911 Ga0207670_100219112 258
124 3300025960 Ga0207651_10042058 Ga0207651_100420583 258
125 3300025972 Ga0207668_10010816 Ga0207668_100108164 258
126 3300025972 Ga0207668_10184067 Ga0207668_101840672 258
127 3300025981 Ga0207640_10027575 Ga0207640_100275752 258
128 3300026067 Ga0207678_10034723 Ga0207678_100347232 258
129 3300026075 Ga0207708_10041488 Ga0207708_100414882 258
130 3300026078 Ga0207702_10052924 Ga0207702_100529242 258
131 3300026089 Ga0207648_10143506 Ga0207648_101435062 258
132 3300026116 Ga0207674_10016792 Ga0207674_100167923 258
133 3300026118 Ga0207675_100001377 Ga0207675_1000013775 258
134 3300028379 Ga0268266_10056009 Ga0268266_100560093 258
135 3300028380 Ga0268265_10021726 Ga0268265_100217264 258
136 3300033179 Ga0307507_10188781 Ga0307507_101887812 258
137 3300037418 Ga0395900_0428445 Ga0395900_0428445_141_1091 258
138 3300045976 Ga0466967_0310660 Ga0466967_0310660_187_1125 258
139 3300046455 Ga0495603_0011242 Ga0495603_0011242_3299_4132 258
140 3300046462 Ga0495651_0013581 Ga0495651_0013581_1076_1912 258
141 3300046492 Ga0495585_0047642 Ga0495585_0047642_70_903 258
142 3300046516 Ga0495628_0026099 Ga0495628_0026099_3183_4019 258
143 3300046522 Ga0495643_0065088 Ga0495643_0065088_11_838 258
144 3300046529 Ga0495652_0029215 Ga0495652_0029215_852_1688 258
145 3300046533 Ga0495640_0106724 Ga0495640_0106724_492_1328 258
146 3300046557 Ga0495622_0057668 Ga0495622_0057668_625_1461 258
147 3300047317 Ga0495604_0058918 Ga0495604_0058918_500_1336 258
148 3300047321 Ga0495676_0014310 Ga0495676_0014310_4841_5674 258
149 3300047321 Ga0495676_0023442 Ga0495676_0023442_2990_3823 258
150 3300047321 Ga0495676_0209457 Ga0495676_0209457_120_953 258
151 3300047444 Ga0495675_0029473 Ga0495675_0029473_2285_3148 258
152 3300005468 Ga0070707_100056546 Ga0070707_1000565464 259
153 3300025922 Ga0207646_10061850 Ga0207646_100618502 259
154 3300044673 Ga0453683_0114211 Ga0453683_0114211_553_1389 259
155 3300045051 Ga0451576_0003521 Ga0451576_0003521_7886_8722 259
156 3300046681 Ga0495647_0062413 Ga0495647_0062413_475_1344 259
157 3300005343 Ga0070687_100255979 Ga0070687_1002559791 260
158 3300005544 Ga0070686_100351287 Ga0070686_1003512871 260
159 3300031548 Ga0307408_100115853 Ga0307408_1001158532 260
160 3300031824 Ga0307413_10013661 Ga0307413_100136612 260
161 3300031852 Ga0307410_10015316 Ga0307410_100153161 260
162 3300031901 Ga0307406_10185055 Ga0307406_101850552 260
163 3300032002 Ga0307416_100019459 Ga0307416_1000194594 260
164 3300032005 Ga0307411_10162177 Ga0307411_101621772 260
165 3300032126 Ga0307415_100026190 Ga0307415_1000261903 260
166 3300044712 Ga0453684_0295436 Ga0453684_0295436_482_1315 260
167 3300049586 Ga0501070_0083180 Ga0501070_0083180_973_1806 260
168 3300049652 Ga0501202_000369 Ga0501202_000369_3156_4022 260
169 3300049656 Ga0501209_000751 Ga0501209_000751_839_1705 260
170 3300049661 Ga0501217_003961 Ga0501217_003961_1615_2481 260
171 3300049674 Ga0501242_014680 Ga0501242_014680_14_880 260
172 3300049704 Ga0501221_004044 Ga0501221_004044_546_1412 260
173 3300049705 Ga0501225_0019677 Ga0501225_0019677_249_1115 260
174 3300049708 Ga0501245_025822 Ga0501245_025822_37_903 260
175 3300049763 Ga0501266_005217 Ga0501266_005217_649_1515 260
176 3300049771 Ga0501274_002035 Ga0501274_002035_413_1279 260
177 3300050511 nmdc:mga08y16_9704_c1 nmdc:mga08y16_9704_c1_1948_2781 260
178 3300050515 nmdc:mga0a205_138552_c1 nmdc:mga0a205_138552_c1_280_1116 260
179 3300053730 Ga0500645_052091 Ga0500645_052091_176_1009 260
180 3300003316 rootH1_10004424 rootH1_1000442426 261
181 3300003320 rootH2_10008311 rootH2_1000831113 261
182 3300003322 rootL2_10011859 rootL2_100118598 261
183 3300003323 rootH1_10006036 rootH1_1000603617 261
184 3300005295 Ga0065707_10150321 Ga0065707_101503212 261
185 3300005347 Ga0070668_100425961 Ga0070668_1004259611 261
186 3300013306 Ga0163162_10448315 Ga0163162_104483152 261
187 3300025972 Ga0207668_10376442 Ga0207668_103764421 261
188 3300031711 Ga0265314_10016857 Ga0265314_100168574 261
189 3300046663 Ga0495635_0251959 Ga0495635_0251959_146_1108 261
190 3300050511 nmdc:mga08y16_22358_c1 nmdc:mga08y16_22358_c1_5321_6277 261

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05721

PhyH

Phytanoyl-CoA dioxygenase (PhyH)

66

267

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5epa-assembly6.cif.gz_F crystal structure of non-heme alpha ketoglutarate dependent carbocyclase snok from nogalamycin biosynthesis 0.7961 16 256
5epa-assembly1.cif.gz_A crystal structure of non-heme alpha ketoglutarate dependent carbocyclase snok from nogalamycin biosynthesis 0.792 16 256
5ep9-assembly2.cif.gz_B crystal structure of the non-heme alpha ketoglutarate dependent epimerase snon from nogalamycin biosynthesis 0.7915 23 258
5ep9-assembly1.cif.gz_A crystal structure of the non-heme alpha ketoglutarate dependent epimerase snon from nogalamycin biosynthesis 0.789 23 258
7dt0-assembly2.cif.gz_B proline hydroxylase h11-n101i mutant 0.7865 19 219
ID Description Score Start End Superfamily
5epaF00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7961 16 256 2.60.120.620
af_Q4DSV6_209_433_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7678 79 256 2.60.120.620
af_C7FZX0_9_206_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7652 63 219 2.60.120.620
af_A0A1R3LVS2_5_190_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7624 78 219 2.60.120.620
5ep9C00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7618 23 258 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A3M1A622-F1-model_v4 Phytanoyl-CoA dioxygenase 0.984 10 184 GO:0005506
GO:0016706
AF-A0A3E1EBR1-F1-model_v4 Ectoine hydroxylase-related dioxygenase 0.9767 14 261 GO:0051213
AF-A0A257IVR1-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9764 40 259 GO:0051213
AF-A0A4V1U7X8-F1-model_v4 deleted 0.9756 13 188
AF-A0A845DD96-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9753 13 260 GO:0005506
GO:0016706

Feature Viewer

pLDDT pTM Quality
87.8 0.85 High
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Predicted Structure (AlphaFold2)

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