F292938

General Info

Members Datasets Scaffolds Average Seq Length
190 118 380 620

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0037547|Ga0453684_0037547_1241_3514
Length 711
Sequence VTRRPRKKRRVEGEVALPWQDTPLAEGADDDTNAVPDEQLERAVTDFFAPGGPLARVISGYEDRPEQRTVALAVTRSLVYRRKLLAEAGTGTGKTLAYLVPLVLSGRRVVVSTATKNLQDQVMSVDVPLLARALGRRVEARLMKGRGNYLCLARSQRALGQKWLAGVDDQGLMPEITAWAEHTTTGDRAELEVLPDGAPFWRELSATSEQCTGRACASFERCFVTLMRRRAQSAEVVVVNHHLYFAELSLRDRVGDPNVALLPGHELVVFDEAHELEEVGGQHFGVEVAEGRFYELGRDLVRAAGAEAGVVARLRVLALELDRRTRFFFAALPAAEARVALRPVDLGDDAWAGFRALSEQLERVVAQVAPLALEDAASLARRAGQLASELRFAIGAGDDGEQPRDRLRYDPSPDFAQLDPEEEARPPADDEEGVTYVRYLEAAGRSRALVARPIEVAPILRRELSPLPAVFVSATLSVGGDFTFLRRRLGVDDADEVVVDSPFDYAAQATLYLPDDVPSPEAPEFGEQAAARAAELVAASGGGAFVLCTSHRMLGLMRRTVAATGVLTLVQGDAPKGRLLEQFKAAGNAALCATLSFWQGVDVPGRALRLVIIDRLPFASPGDPLLAARLEHLRARGHDPFRSYQLPQAALLLRQGFGRLIRRRTDHGMVALLDRRISTRGYGAMLLATLPPCRRVDDRQEALALLAANAG

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
49 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
50 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
51 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
80 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
81 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
84 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
107 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
108 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
113 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
114 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.42
Metatranscriptomes 1.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 15.79
Rhizosphere 83.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0037547 3300044712 Bacteria 6648
2 Ga0070658_10036827 3300005327 Bacteria 3943
3 Ga0070658_10054675 3300005327 Bacteria 3241
4 Ga0070683_100017910 3300005329 Bacteria 6262
5 Ga0070683_100050891 3300005329 Bacteria 3837
6 Ga0070680_100010936 3300005336 Bacteria 7014
7 Ga0070660_100005194 3300005339 Bacteria 8999
8 Ga0070660_100026818 3300005339 Bacteria 4293
9 Ga0070660_100044445 3300005339 Bacteria 3398
10 Ga0070661_100027638 3300005344 Bacteria 4086
11 Ga0070659_100001847 3300005366 Bacteria 15221
12 Ga0070659_100043536 3300005366 Bacteria 3511
13 Ga0070694_100068058 3300005444 Bacteria 2446
14 Ga0070708_100002498 3300005445 Bacteria 14194
15 Ga0070708_100010524 3300005445 Bacteria 7500
16 Ga0070681_10010163 3300005458 Bacteria 9281
17 Ga0070681_10068657 3300005458 Bacteria 3511
18 Ga0070681_10093507 3300005458 Bacteria 2955
19 Ga0070681_10161735 3300005458 Bacteria 2163
20 Ga0070698_100025419 3300005471 Bacteria 6173
21 Ga0070699_100057711 3300005518 Bacteria 3362
22 Ga0070679_100015262 3300005530 Bacteria 7380
23 Ga0070679_100040940 3300005530 Bacteria 4611
24 Ga0070684_100019924 3300005535 Bacteria 5559
25 Ga0070684_100064950 3300005535 Bacteria 3202
26 Ga0070665_100013690 3300005548 Bacteria 8162
27 Ga0068855_100027276 3300005563 Bacteria 6834
28 Ga0068855_100052960 3300005563 Bacteria 4776
29 Ga0068855_100070576 3300005563 Bacteria 4063
30 Ga0068855_100124718 3300005563 Bacteria 2945
31 Ga0068852_100049993 3300005616 Bacteria 3580
32 Ga0081539_10001511 3300005985 Bacteria 39181
33 Ga0070712_100009322 3300006175 Bacteria 6187
34 Ga0075430_100052883 3300006846 Bacteria 3420
35 Ga0075435_100003349 3300007076 Bacteria 10858
36 Ga0105240_10016264 3300009093 Bacteria 10078
37 Ga0111539_10002895 3300009094 Bacteria 22794
38 Ga0111539_10033629 3300009094 Bacteria 6224
39 Ga0105238_10017384 3300009551 Bacteria 7306
40 Ga0105239_10047235 3300010375 Bacteria 4718
41 Ga0105239_10127532 3300010375 Bacteria 2829
42 Ga0157370_10004745 3300013104 Bacteria 15476
43 Ga0157370_10024477 3300013104 Bacteria 5980
44 Ga0157370_10138102 3300013104 Bacteria 2271
45 Ga0157370_10141231 3300013104 Bacteria 2244
46 Ga0157369_10005648 3300013105 Bacteria 14534
47 Ga0157369_10007096 3300013105 Bacteria 12920
48 Ga0157369_10105668 3300013105 Bacteria 2997
49 Ga0157372_10060930 3300013307 Bacteria 4223
50 Ga0206354_10339588 3300020081 Bacteria 4638
51 Ga0206353_10376697 3300020082 Bacteria 4381
52 Ga0206353_11714726 3300020082 Bacteria 2913
53 Ga0207705_10003252 3300025909 Bacteria 12373
54 Ga0207707_10144896 3300025912 Bacteria 2076
55 Ga0207693_10012066 3300025915 Bacteria 6987
56 Ga0207660_10017424 3300025917 Bacteria 4772
57 Ga0207657_10001931 3300025919 Bacteria 22381
58 Ga0207657_10002125 3300025919 Bacteria 21454
59 Ga0207657_10014116 3300025919 Bacteria 7816
60 Ga0207657_10032103 3300025919 Bacteria 4748
61 Ga0207657_10058698 3300025919 Bacteria 3309
62 Ga0207657_10068824 3300025919 Bacteria 3006
63 Ga0207649_10013149 3300025920 Bacteria 4617
64 Ga0207652_10010336 3300025921 Bacteria 7517
65 Ga0207652_10055389 3300025921 Bacteria 3410
66 Ga0207694_10081421 3300025924 Bacteria 2543
67 Ga0207664_10085478 3300025929 Bacteria 2575
68 Ga0207690_10051274 3300025932 Bacteria 2759
69 Ga0207661_10051581 3300025944 Bacteria 3283
70 Ga0207667_10054385 3300025949 Bacteria 4211
71 Ga0207678_10017715 3300026067 Bacteria 6255
72 Ga0207674_10157498 3300026116 Bacteria 2226
73 Ga0207428_10023732 3300027907 Bacteria 5152
74 Ga0265313_10018552 3300031595 Bacteria 3901
75 Ga0316576_10039188 3300031727 Bacteria 3401
76 Ga0316578_10033271 3300031728 Bacteria 2952
77 Ga0373943_0001492 3300035170 Bacteria 10602
78 Ga0373943_0010407 3300035170 Bacteria 4168
79 Ga0373943_0014086 3300035170 Bacteria 3616
80 Ga0373935_0041070 3300035692 Bacteria 2905
81 Ga0373947_0001675 3300035725 Bacteria 13561
82 Ga0373947_0005782 3300035725 Bacteria 7215
83 Ga0316584_0003147 3300036712 Bacteria 10667
84 Ga0373925_0002352 3300037068 Bacteria 15188
85 Ga0395899_0003032 3300037312 Bacteria 13412
86 Ga0395900_0008608 3300037418 Bacteria 10486
87 Ga0395900_0025765 3300037418 Bacteria 6020
88 Ga0395898_0002445 3300037466 Bacteria 21961
89 Ga0395898_0002937 3300037466 Bacteria 19385
90 Ga0395898_0006113 3300037466 Bacteria 12907
91 Ga0395898_0055742 3300037466 Bacteria 3855
92 Ga0395898_0132690 3300037466 Bacteria 2385
93 Ga0395905_0073654 3300037471 Bacteria 3201
94 Ga0395901_0003793 3300038443 Bacteria 15221
95 Ga0395901_0005448 3300038443 Bacteria 12882
96 Ga0395901_0012082 3300038443 Bacteria 8760
97 Ga0395901_0021640 3300038443 Bacteria 6587
98 Ga0395901_0045687 3300038443 Bacteria 4546
99 Ga0395901_0059405 3300038443 Bacteria 3978
100 Ga0395901_0126914 3300038443 Bacteria 2681
101 Ga0436360_0203350 3300039438 Bacteria 2393
102 Ga0466972_0018881 3300044658 Bacteria 3446
103 Ga0466961_0002661 3300044693 Bacteria 11077
104 Ga0466963_0003510 3300044694 Bacteria 8998
105 Ga0466963_0044509 3300044694 Bacteria 2922
106 Ga0466964_0001598 3300044706 Bacteria 7812
107 Ga0466957_0020003 3300044842 Bacteria 3940
108 Ga0466957_0024579 3300044842 Bacteria 3565
109 Ga0466959_0002856 3300045049 Bacteria 11138
110 Ga0466959_0021712 3300045049 Bacteria 4738
111 Ga0466958_0001620 3300045836 Bacteria 10837
112 Ga0466958_0027326 3300045836 Bacteria 3378
113 Ga0466967_0002221 3300045976 Bacteria 11944
114 Ga0466967_0006638 3300045976 Bacteria 8225
115 Ga0466967_0028807 3300045976 Bacteria 4642
116 Ga0466967_0050052 3300045976 Bacteria 3657
117 Ga0495629_0005057 3300046459 Bacteria 9868
118 Ga0495629_0008956 3300046459 Bacteria 7350
119 Ga0495641_0000455 3300046461 Bacteria 34086
120 Ga0495641_0013520 3300046461 Bacteria 4477
121 Ga0495582_0000050 3300046473 Bacteria 59164
122 Ga0495639_0000871 3300046475 Bacteria 13644
123 Ga0495594_0033837 3300046499 Bacteria 2780
124 Ga0495628_0077673 3300046516 Bacteria 2582
125 Ga0495630_0036477 3300046517 Bacteria 3675
126 Ga0495665_0002244 3300046531 Bacteria 10458
127 Ga0495640_0001758 3300046533 Bacteria 17170
128 Ga0495587_0031680 3300046536 Bacteria 3200
129 Ga0495667_0041082 3300046559 Bacteria 3068
130 Ga0495657_0064557 3300046675 Bacteria 2411
131 Ga0495613_0001715 3300046689 Bacteria 16689
132 Ga0495613_0005719 3300046689 Bacteria 9321
133 Ga0495613_0012923 3300046689 Bacteria 6206
134 Ga0495613_0032753 3300046689 Bacteria 3861
135 Ga0495581_0000618 3300047315 Bacteria 18638
136 Ga0495674_0002761 3300047319 Bacteria 17035
137 Ga0495676_0015822 3300047321 Bacteria 6704
138 Ga0495680_0000280 3300047322 Bacteria 57136
139 Ga0495680_0004409 3300047322 Bacteria 13460
140 Ga0495684_0003793 3300047471 Bacteria 11780
141 Ga0495593_0003213 3300047673 Bacteria 9801
142 Ga0496100_0000638 3300048903 Bacteria 16634
143 Ga0496100_0036051 3300048903 Bacteria 3117
144 Ga0496100_0068148 3300048903 Bacteria 2365
145 Ga0496101_0002096 3300048904 Bacteria 12157
146 Ga0496101_0025589 3300048904 Bacteria 4096
147 Ga0496102_0001920 3300048905 Bacteria 17893
148 Ga0496102_0015754 3300048905 Bacteria 6587
149 Ga0496104_0000288 3300048907 Bacteria 44366
150 Ga0496104_0164212 3300048907 Bacteria 2129
151 Ga0496105_0001581 3300048908 Bacteria 16141
152 Ga0496105_0040835 3300048908 Bacteria 3825
153 Ga0496106_0004226 3300048909 Bacteria 10690
154 Ga0496106_0012668 3300048909 Bacteria 6230
155 Ga0496106_0078651 3300048909 Bacteria 2531
156 Ga0496107_0004588 3300048910 Bacteria 9362
157 Ga0496107_0111996 3300048910 Bacteria 2006
158 Ga0496108_0017931 3300048911 Bacteria 5792
159 Ga0496109_0013159 3300048912 Bacteria 7160
160 Ga0496110_0005256 3300048913 Bacteria 10131
161 Ga0496111_0060940 3300048914 Bacteria 2735
162 Ga0496112_0002071 3300048915 Bacteria 15904
163 Ga0496112_0035744 3300048915 Bacteria 4842
164 Ga0496113_0024127 3300048916 Bacteria 4319
165 Ga0496114_0002712 3300048917 Bacteria 13523
166 Ga0496114_0013682 3300048917 Bacteria 6505
167 Ga0496114_0030141 3300048917 Bacteria 4462
168 Ga0496114_0068592 3300048917 Bacteria 2977
169 Ga0496114_0072039 3300048917 Bacteria 2905
170 Ga0496115_0010271 3300048918 Bacteria 6988
171 Ga0496115_0064266 3300048918 Bacteria 2962
172 Ga0496126_0034691 3300048929 Bacteria 4736
173 Ga0501047_0031702 3300049581 Bacteria 5099
174 Ga0501067_0001525 3300049583 Bacteria 12613
175 Ga0501070_0029656 3300049586 Bacteria 4585
176 Ga0501071_0102584 3300049587 Bacteria 2110
177 Ga0501077_0021277 3300049593 Bacteria 4104
178 Ga0501081_0095060 3300049743 Bacteria 2100
179 Ga0501035_0000308 3300049822 Bacteria 56895
180 Ga0501045_0095857 3300049824 Bacteria 2195
181 nmdc:mga08y16_6055_c1 3300050511 Bacteria 12678
182 nmdc:mga0n895_48125_c1 3300050512 Bacteria 4172
183 nmdc:mga0rr50_20538_c1 3300050513 Bacteria 4490
184 Ga0495619_0004719 3300053085 Bacteria 8677
185 Ga0501084_0084123 3300054114 Bacteria 2671
186 Ga0501082_0094184 3300060353 Bacteria 2588
187 Ga0466962_0014453 3300061719 Bacteria 3805
188 Ga0466962_0021908 3300061719 Bacteria 3068
189 Ga0530510_0023978 3300061734 Bacteria 4352
190 Ga0530510_0048261 3300061734 Bacteria 3077
191 Ga0453684_0037547
192 Ga0070658_10036827
193 Ga0070658_10054675
194 Ga0070683_100017910
195 Ga0070683_100050891
196 Ga0070680_100010936
197 Ga0070660_100005194
198 Ga0070660_100026818
199 Ga0070660_100044445
200 Ga0070661_100027638
201 Ga0070659_100001847
202 Ga0070659_100043536
203 Ga0070694_100068058
204 Ga0070708_100002498
205 Ga0070708_100010524
206 Ga0070681_10010163
207 Ga0070681_10068657
208 Ga0070681_10093507
209 Ga0070681_10161735
210 Ga0070698_100025419
211 Ga0070699_100057711
212 Ga0070679_100015262
213 Ga0070679_100040940
214 Ga0070684_100019924
215 Ga0070684_100064950
216 Ga0070665_100013690
217 Ga0068855_100027276
218 Ga0068855_100052960
219 Ga0068855_100070576
220 Ga0068855_100124718
221 Ga0068852_100049993
222 Ga0081539_10001511
223 Ga0070712_100009322
224 Ga0075430_100052883
225 Ga0075435_100003349
226 Ga0105240_10016264
227 Ga0111539_10002895
228 Ga0111539_10033629
229 Ga0105238_10017384
230 Ga0105239_10047235
231 Ga0105239_10127532
232 Ga0157370_10004745
233 Ga0157370_10024477
234 Ga0157370_10138102
235 Ga0157370_10141231
236 Ga0157369_10005648
237 Ga0157369_10007096
238 Ga0157369_10105668
239 Ga0157372_10060930
240 Ga0206354_10339588
241 Ga0206353_10376697
242 Ga0206353_11714726
243 Ga0207705_10003252
244 Ga0207707_10144896
245 Ga0207693_10012066
246 Ga0207660_10017424
247 Ga0207657_10001931
248 Ga0207657_10002125
249 Ga0207657_10014116
250 Ga0207657_10032103
251 Ga0207657_10058698
252 Ga0207657_10068824
253 Ga0207649_10013149
254 Ga0207652_10010336
255 Ga0207652_10055389
256 Ga0207694_10081421
257 Ga0207664_10085478
258 Ga0207690_10051274
259 Ga0207661_10051581
260 Ga0207667_10054385
261 Ga0207678_10017715
262 Ga0207674_10157498
263 Ga0207428_10023732
264 Ga0265313_10018552
265 Ga0316576_10039188
266 Ga0316578_10033271
267 Ga0373943_0001492
268 Ga0373943_0010407
269 Ga0373943_0014086
270 Ga0373935_0041070
271 Ga0373947_0001675
272 Ga0373947_0005782
273 Ga0316584_0003147
274 Ga0373925_0002352
275 Ga0395899_0003032
276 Ga0395900_0008608
277 Ga0395900_0025765
278 Ga0395898_0002445
279 Ga0395898_0002937
280 Ga0395898_0006113
281 Ga0395898_0055742
282 Ga0395898_0132690
283 Ga0395905_0073654
284 Ga0395901_0003793
285 Ga0395901_0005448
286 Ga0395901_0012082
287 Ga0395901_0021640
288 Ga0395901_0045687
289 Ga0395901_0059405
290 Ga0395901_0126914
291 Ga0436360_0203350
292 Ga0466972_0018881
293 Ga0466961_0002661
294 Ga0466963_0003510
295 Ga0466963_0044509
296 Ga0466964_0001598
297 Ga0466957_0020003
298 Ga0466957_0024579
299 Ga0466959_0002856
300 Ga0466959_0021712
301 Ga0466958_0001620
302 Ga0466958_0027326
303 Ga0466967_0002221
304 Ga0466967_0006638
305 Ga0466967_0028807
306 Ga0466967_0050052
307 Ga0495629_0005057
308 Ga0495629_0008956
309 Ga0495641_0000455
310 Ga0495641_0013520
311 Ga0495582_0000050
312 Ga0495639_0000871
313 Ga0495594_0033837
314 Ga0495628_0077673
315 Ga0495630_0036477
316 Ga0495665_0002244
317 Ga0495640_0001758
318 Ga0495587_0031680
319 Ga0495667_0041082
320 Ga0495657_0064557
321 Ga0495613_0001715
322 Ga0495613_0005719
323 Ga0495613_0012923
324 Ga0495613_0032753
325 Ga0495581_0000618
326 Ga0495674_0002761
327 Ga0495676_0015822
328 Ga0495680_0000280
329 Ga0495680_0004409
330 Ga0495684_0003793
331 Ga0495593_0003213
332 Ga0496100_0000638
333 Ga0496100_0036051
334 Ga0496100_0068148
335 Ga0496101_0002096
336 Ga0496101_0025589
337 Ga0496102_0001920
338 Ga0496102_0015754
339 Ga0496104_0000288
340 Ga0496104_0164212
341 Ga0496105_0001581
342 Ga0496105_0040835
343 Ga0496106_0004226
344 Ga0496106_0012668
345 Ga0496106_0078651
346 Ga0496107_0004588
347 Ga0496107_0111996
348 Ga0496108_0017931
349 Ga0496109_0013159
350 Ga0496110_0005256
351 Ga0496111_0060940
352 Ga0496112_0002071
353 Ga0496112_0035744
354 Ga0496113_0024127
355 Ga0496114_0002712
356 Ga0496114_0013682
357 Ga0496114_0030141
358 Ga0496114_0068592
359 Ga0496114_0072039
360 Ga0496115_0010271
361 Ga0496115_0064266
362 Ga0496126_0034691
363 Ga0501047_0031702
364 Ga0501067_0001525
365 Ga0501070_0029656
366 Ga0501071_0102584
367 Ga0501077_0021277
368 Ga0501081_0095060
369 Ga0501035_0000308
370 Ga0501045_0095857
371 nmdc:mga08y16_6055_c1
372 nmdc:mga0n895_48125_c1
373 nmdc:mga0rr50_20538_c1
374 Ga0495619_0004719
375 Ga0501084_0084123
376 Ga0501082_0094184
377 Ga0466962_0014453
378 Ga0466962_0021908
379 Ga0530510_0023978
380 Ga0530510_0048261

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13307

Helicase_C_2

Helicase C-terminal domain

533

693

0.97

PF00270

DEAD

DEAD/DEAH box helicase

64

149

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fwr-assembly1.cif.gz_A structure of ding in complex with ssdna 0.7965 10 574
6fwr-assembly1.cif.gz_A structure of ding in complex with ssdna 0.7634 10 574
2b2n-assembly1.cif.gz_A structure of transcription-repair coupling factor 0.7173 406 475
7xg4-assembly1.cif.gz_L cryoem structure of type iv-a casding bound nts-nicked csf-crrna-dsdna quaternary complex in a second state 0.7038 7 569
5nt7-assembly1.cif.gz_D structure of the lotus domain of oskar in complex with the c-terminal reca-like domain of vasa 0.6955 384 553
ID Description Score Start End Superfamily
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8952 391 578 3.40.50.300
af_P9WMR5_468_655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8862 398 583 3.40.50.300
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8779 391 578 3.40.50.300
af_P9WMR5_468_655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8559 398 583 3.40.50.300
af_P27296_27_287_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8342 20 228 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7R9R673-F1-model_v4 deleted 0.9557 353 583
AF-A0A535LDF7-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9554 372 583 GO:0003676
GO:0003678
GO:0005524
GO:0006139
GO:0006974
GO:0016818
AF-A0A7C1ARJ1-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9499 356 582 GO:0003676
GO:0003678
GO:0005524
GO:0006139
GO:0006974
GO:0016818
AF-A0A7V3L019-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9483 405 591 GO:0003676
GO:0003678
GO:0005524
GO:0006139
GO:0006974
GO:0016818
AF-A0A831RY19-F1-model_v4 ATP-dependent DNA helicase 0.9475 363 585 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818

Map