F292923

General Info

Members Datasets Scaffolds Average Seq Length
190 106 380 281

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0026563|Ga0453683_0026563_819_1784
Length 321
Sequence MVAFRTLVPRPAGERARHHPAERAVSGLSLWRVLVLASVQGLTELLPVSSSAHVVVAEKLMGLDPSAPAMTLLLVMLHAGTMLAVIVYFWTAWRHAFFASAAAFTRFARLLVLATAVTGVVGGALIAGIERLWFHHAPRADVELLFGRLELIAPALALAGVLILVAGLGERRSPPRATSDGGHTADDLGLDVRQAGLIGAVQGLCLPFRGFSRSGATISTAMLAGVPKMRAEAFSFALAVVLTPPVVIREALRLRSADQLDAARLGSAMLPSLLGAGCAFVVGLLALRWLSRWLEGGRWSWFGVYCLLAAGGVALLQRAGY

Samples

Sample ID Description Type Environment
1 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
4 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
5 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
28 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
46 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
52 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
81 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
88 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
100 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
101 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
102 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
103 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
104 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
105 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
106 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.95
Metatranscriptomes 0
Isolates 1.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.47
Nodule 0
Rhizoplane 0.53
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 8.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453683_0026563 3300044673 Bacteria 3676
2 rootH2_10024053 3300003320 Bacteria 8460
3 Ga0055532_1000035 3300003758 Bacteria 209386
4 Ga0055527_1000021 3300003760 Bacteria 209386
5 Ga0055535_1000012 3300003761 Bacteria 330206
6 Ga0055529_1000047 3300003763 Bacteria 209386
7 Ga0070658_10000432 3300005327 Bacteria 36448
8 Ga0070680_100037816 3300005336 Bacteria 3901
9 Ga0070680_100138945 3300005336 Bacteria 2036
10 Ga0070713_100542809 3300005436 Bacteria 1100
11 Ga0070708_100336492 3300005445 Bacteria 1422
12 Ga0070681_10018004 3300005458 Bacteria 7058
13 Ga0070681_10299673 3300005458 Bacteria 1518
14 Ga0070681_10317359 3300005458 Bacteria 1468
15 Ga0070706_100000356 3300005467 Bacteria 55144
16 Ga0070706_100428127 3300005467 Bacteria 1232
17 Ga0070707_100081706 3300005468 Bacteria 3120
18 Ga0070698_100003619 3300005471 Bacteria 16991
19 Ga0070698_100028070 3300005471 Bacteria 5849
20 Ga0070679_100047605 3300005530 Bacteria 4272
21 Ga0070679_100310521 3300005530 Bacteria 1527
22 Ga0070679_100459995 3300005530 Bacteria 1217
23 Ga0070697_100206075 3300005536 Bacteria 1673
24 Ga0070697_100263318 3300005536 Bacteria 1476
25 Ga0070697_100286370 3300005536 Bacteria 1414
26 Ga0070696_100001597 3300005546 Bacteria 14867
27 Ga0070665_100003545 3300005548 Bacteria 16570
28 Ga0070665_100167359 3300005548 Bacteria 2200
29 Ga0068855_100063713 3300005563 Bacteria 4301
30 Ga0070717_10108070 3300006028 Bacteria 2370
31 Ga0070717_10283416 3300006028 Unclassified 1470
32 Ga0075363_100138506 3300006048 Unclassified 1369
33 Ga0075362_10000131 3300006177 Bacteria 20735
34 Ga0105240_10013876 3300009093 Bacteria 11036
35 Ga0105249_10160853 3300009553 Unclassified 2170
36 Ga0157370_10556583 3300013104 Bacteria 1051
37 Ga0157369_10057429 3300013105 Bacteria 4199
38 Ga0213872_10020884 3300021361 Bacteria 3016
39 Ga0213872_10096525 3300021361 Bacteria 1319
40 Ga0213874_10036335 3300021377 Bacteria 1452
41 Ga0213874_10088656 3300021377 Bacteria 1013
42 Ga0213875_10094431 3300021388 Bacteria 1395
43 Ga0209672_100060 3300025228 Bacteria 209438
44 Ga0209147_100073 3300025229 Bacteria 209438
45 Ga0209258_100103 3300025242 Bacteria 209438
46 Ga0209148_1007662 3300025254 Bacteria 2224
47 Ga0209455_1000099 3300025272 Bacteria 209438
48 Ga0207705_10223693 3300025909 Bacteria 1430
49 Ga0207684_10001317 3300025910 Bacteria 27251
50 Ga0207684_10191677 3300025910 Bacteria 1763
51 Ga0207695_10034245 3300025913 Bacteria 5528
52 Ga0207695_10122915 3300025913 Bacteria 2562
53 Ga0207663_10000843 3300025916 Bacteria 13912
54 Ga0207652_10058693 3300025921 Bacteria 3315
55 Ga0207652_10261910 3300025921 Bacteria 1560
56 Ga0207646_10076280 3300025922 Bacteria 2995
57 Ga0207646_10495105 3300025922 Bacteria 1101
58 Ga0207664_10163646 3300025929 Bacteria 1899
59 Ga0207665_10032643 3300025939 Bacteria 3448
60 Ga0207712_10348696 3300025961 Unclassified 1230
61 Ga0268266_10013079 3300028379 Bacteria 7157
62 Ga0265326_10010006 3300028558 Bacteria 2826
63 Ga0265326_10067062 3300028558 Bacteria 1014
64 Ga0265319_1000438 3300028563 Bacteria 29938
65 Ga0265319_1005333 3300028563 Bacteria 6170
66 Ga0265319_1066639 3300028563 Bacteria 1159
67 Ga0265334_10000199 3300028573 Bacteria 34501
68 Ga0265334_10020251 3300028573 Unclassified 2726
69 Ga0265334_10047845 3300028573 Bacteria 1648
70 Ga0265318_10001908 3300028577 Bacteria 11684
71 Ga0265318_10015042 3300028577 Bacteria 3230
72 Ga0265318_10017083 3300028577 Bacteria 2985
73 Ga0265323_10034632 3300028653 Bacteria 1864
74 Ga0265323_10043942 3300028653 Bacteria 1611
75 Ga0265338_10010615 3300028800 Bacteria 10768
76 Ga0265338_10011222 3300028800 Bacteria 10382
77 Ga0265338_10013171 3300028800 Bacteria 9363
78 Ga0265338_10024692 3300028800 Bacteria 6132
79 Ga0265338_10028120 3300028800 Bacteria 5618
80 Ga0265338_10036017 3300028800 Bacteria 4745
81 Ga0265338_10053607 3300028800 Bacteria 3605
82 Ga0265338_10061012 3300028800 Bacteria 3307
83 Ga0265338_10086943 3300028800 Bacteria 2599
84 Ga0265338_10102645 3300028800 Unclassified 2325
85 Ga0265338_10103982 3300028800 Bacteria 2305
86 Ga0265338_10163892 3300028800 Bacteria 1714
87 Ga0265324_10017775 3300029957 Bacteria 2583
88 Ga0265324_10059569 3300029957 Bacteria 1305
89 Ga0307511_10000152 3300030521 Bacteria 65858
90 Ga0265332_10093181 3300031238 Bacteria 1273
91 Ga0265320_10000254 3300031240 Bacteria 43938
92 Ga0265320_10039891 3300031240 Bacteria 2344
93 Ga0265320_10064136 3300031240 Unclassified 1746
94 Ga0265320_10075676 3300031240 Bacteria 1579
95 Ga0265320_10091662 3300031240 Bacteria 1407
96 Ga0265325_10013091 3300031241 Bacteria 4727
97 Ga0265339_10011060 3300031249 Bacteria 5575
98 Ga0265339_10030477 3300031249 Bacteria 3054
99 Ga0265331_10001273 3300031250 Bacteria 18843
100 Ga0265331_10006184 3300031250 Bacteria 7107
101 Ga0265331_10021228 3300031250 Bacteria 3326
102 Ga0265331_10045721 3300031250 Bacteria 2113
103 Ga0265327_10000557 3300031251 Bacteria 63857
104 Ga0265327_10000752 3300031251 Bacteria 50420
105 Ga0265327_10001254 3300031251 Bacteria 33701
106 Ga0265327_10004679 3300031251 Bacteria 11979
107 Ga0265327_10010436 3300031251 Bacteria 6536
108 Ga0265327_10170334 3300031251 Bacteria 1001
109 Ga0265316_10023893 3300031344 Bacteria 5132
110 Ga0265316_10111946 3300031344 Bacteria 2067
111 Ga0265316_10183103 3300031344 Bacteria 1559
112 Ga0265316_10223478 3300031344 Bacteria 1388
113 Ga0307509_10000127 3300031507 Bacteria 112456
114 Ga0265313_10000831 3300031595 Bacteria 31241
115 Ga0265313_10007402 3300031595 Bacteria 7518
116 Ga0265313_10088938 3300031595 Bacteria 1390
117 Ga0265314_10021541 3300031711 Bacteria 4951
118 Ga0265314_10036440 3300031711 Bacteria 3574
119 Ga0265342_10001929 3300031712 Bacteria 18604
120 Ga0265342_10005452 3300031712 Bacteria 9693
121 Ga0265342_10222616 3300031712 Bacteria 1016
122 Ga0265342_10235508 3300031712 Unclassified 982
123 Ga0373931_0007830 3300035691 Bacteria 5049
124 Ga0373931_0038208 3300035691 Bacteria 2510
125 Ga0395899_0112200 3300037312 Unclassified 1959
126 Ga0395900_0479542 3300037418 Unclassified 1196
127 Ga0395900_0539183 3300037418 Bacteria 1113
128 Ga0395898_0005099 3300037466 Bacteria 14229
129 Ga0395898_0056135 3300037466 Bacteria 3840
130 Ga0395898_0133562 3300037466 Bacteria 2376
131 Ga0395898_0382090 3300037466 Bacteria 1343
132 Ga0395898_0383573 3300037466 Bacteria 1340
133 Ga0395905_0001067 3300037471 Bacteria 34539
134 Ga0395905_0001860 3300037471 Bacteria 24297
135 Ga0395905_0213320 3300037471 Unclassified 1808
136 Ga0436364_0511146 3300037853 Bacteria 1868
137 Ga0436364_0881079 3300037853 Bacteria 4846
138 Ga0436364_1022479 3300037853 Bacteria 2743
139 Ga0395901_0153172 3300038443 Bacteria 2422
140 Ga0395901_0160979 3300038443 Bacteria 2357
141 Ga0436365_1270590 3300039437 Bacteria 1138
142 Ga0436360_0782938 3300039438 Bacteria 1460
143 Ga0436360_1168823 3300039438 Unclassified 1262
144 Ga0436361_0199921 3300039447 Bacteria 29936
145 Ga0436361_0586318 3300039447 Unclassified 2520
146 Ga0436361_0728004 3300039447 Bacteria 2132
147 Ga0436361_0962822 3300039447 Bacteria 2279
148 Ga0436361_1091519 3300039447 Bacteria 12485
149 Ga0436363_0968743 3300039450 Bacteria 2574
150 Ga0436363_1062590 3300039450 Bacteria 1751
151 Ga0436363_1438034 3300039450 Bacteria 1359
152 Ga0436362_0971618 3300039453 Bacteria 1377
153 Ga0436362_1093793 3300039453 Unclassified 2467
154 Ga0451577_0064734 3300042876 Bacteria 3260
155 Ga0466969_0282779 3300044656 Bacteria 751
156 Ga0466977_0010581 3300044666 Bacteria 5264
157 Ga0453683_0060830 3300044673 Bacteria 2361
158 Ga0466966_0200648 3300044684 Bacteria 1207
159 Ga0466963_0151467 3300044694 Unclassified 1611
160 Ga0466963_0287930 3300044694 Bacteria 1155
161 Ga0466964_0004666 3300044706 Bacteria 5065
162 Ga0453684_0085061 3300044712 Bacteria 3931
163 Ga0466957_0022048 3300044842 Bacteria 3755
164 Ga0466959_0163158 3300045049 Bacteria 1566
165 Ga0466959_0268527 3300045049 Bacteria 1173
166 Ga0466967_0078767 3300045976 Bacteria 2969
167 Ga0466967_0150002 3300045976 Unclassified 2178
168 Ga0495630_0122711 3300046517 Bacteria 1971
169 Ga0495622_0086221 3300046557 Bacteria 1444
170 Ga0495633_0001479 3300046558 Bacteria 18220
171 Ga0496112_0063123 3300048915 Bacteria 3654
172 Ga0496121_0071613 3300048924 Bacteria 2787
173 Ga0496124_0009840 3300048927 Bacteria 9779
174 Ga0496125_0236677 3300048928 Bacteria 1163
175 Ga0496126_0447893 3300048929 Bacteria 1040
176 Ga0495682_0012172 3300049460 Bacteria 3303
177 Ga0501034_0277372 3300049571 Bacteria 1616
178 Ga0501047_0122541 3300049581 Bacteria 2481
179 Ga0501035_0009909 3300049822 Bacteria 8846
180 Ga0501035_0012756 3300049822 Bacteria 7765
181 Ga0501044_0000185 3300049823 Bacteria 77663
182 nmdc:mga03683_144_c1 3300050489 Bacteria 24223
183 nmdc:mga03n38_8593_c1 3300050490 Bacteria 3672
184 nmdc:mga0k408_471_c1 3300050493 Bacteria 22101
185 nmdc:mga0k408_84_c1 3300050493 Bacteria 44540
186 Ga0500643_001686 3300053087 Bacteria 12291
187 Ga0500555_000556 3300053103 Bacteria 14854
188 Ga0500556_0000939 3300053104 Bacteria 15757
189 2723876694 2721755763 Bacteria 4464185
190 2881413994 2881412998 Bacteria 6492157
191 Ga0453683_0026563
192 rootH2_10024053
193 Ga0055532_1000035
194 Ga0055527_1000021
195 Ga0055535_1000012
196 Ga0055529_1000047
197 Ga0070658_10000432
198 Ga0070680_100037816
199 Ga0070680_100138945
200 Ga0070713_100542809
201 Ga0070708_100336492
202 Ga0070681_10018004
203 Ga0070681_10299673
204 Ga0070681_10317359
205 Ga0070706_100000356
206 Ga0070706_100428127
207 Ga0070707_100081706
208 Ga0070698_100003619
209 Ga0070698_100028070
210 Ga0070679_100047605
211 Ga0070679_100310521
212 Ga0070679_100459995
213 Ga0070697_100206075
214 Ga0070697_100263318
215 Ga0070697_100286370
216 Ga0070696_100001597
217 Ga0070665_100003545
218 Ga0070665_100167359
219 Ga0068855_100063713
220 Ga0070717_10108070
221 Ga0070717_10283416
222 Ga0075363_100138506
223 Ga0075362_10000131
224 Ga0105240_10013876
225 Ga0105249_10160853
226 Ga0157370_10556583
227 Ga0157369_10057429
228 Ga0213872_10020884
229 Ga0213872_10096525
230 Ga0213874_10036335
231 Ga0213874_10088656
232 Ga0213875_10094431
233 Ga0209672_100060
234 Ga0209147_100073
235 Ga0209258_100103
236 Ga0209148_1007662
237 Ga0209455_1000099
238 Ga0207705_10223693
239 Ga0207684_10001317
240 Ga0207684_10191677
241 Ga0207695_10034245
242 Ga0207695_10122915
243 Ga0207663_10000843
244 Ga0207652_10058693
245 Ga0207652_10261910
246 Ga0207646_10076280
247 Ga0207646_10495105
248 Ga0207664_10163646
249 Ga0207665_10032643
250 Ga0207712_10348696
251 Ga0268266_10013079
252 Ga0265326_10010006
253 Ga0265326_10067062
254 Ga0265319_1000438
255 Ga0265319_1005333
256 Ga0265319_1066639
257 Ga0265334_10000199
258 Ga0265334_10020251
259 Ga0265334_10047845
260 Ga0265318_10001908
261 Ga0265318_10015042
262 Ga0265318_10017083
263 Ga0265323_10034632
264 Ga0265323_10043942
265 Ga0265338_10010615
266 Ga0265338_10011222
267 Ga0265338_10013171
268 Ga0265338_10024692
269 Ga0265338_10028120
270 Ga0265338_10036017
271 Ga0265338_10053607
272 Ga0265338_10061012
273 Ga0265338_10086943
274 Ga0265338_10102645
275 Ga0265338_10103982
276 Ga0265338_10163892
277 Ga0265324_10017775
278 Ga0265324_10059569
279 Ga0307511_10000152
280 Ga0265332_10093181
281 Ga0265320_10000254
282 Ga0265320_10039891
283 Ga0265320_10064136
284 Ga0265320_10075676
285 Ga0265320_10091662
286 Ga0265325_10013091
287 Ga0265339_10011060
288 Ga0265339_10030477
289 Ga0265331_10001273
290 Ga0265331_10006184
291 Ga0265331_10021228
292 Ga0265331_10045721
293 Ga0265327_10000557
294 Ga0265327_10000752
295 Ga0265327_10001254
296 Ga0265327_10004679
297 Ga0265327_10010436
298 Ga0265327_10170334
299 Ga0265316_10023893
300 Ga0265316_10111946
301 Ga0265316_10183103
302 Ga0265316_10223478
303 Ga0307509_10000127
304 Ga0265313_10000831
305 Ga0265313_10007402
306 Ga0265313_10088938
307 Ga0265314_10021541
308 Ga0265314_10036440
309 Ga0265342_10001929
310 Ga0265342_10005452
311 Ga0265342_10222616
312 Ga0265342_10235508
313 Ga0373931_0007830
314 Ga0373931_0038208
315 Ga0395899_0112200
316 Ga0395900_0479542
317 Ga0395900_0539183
318 Ga0395898_0005099
319 Ga0395898_0056135
320 Ga0395898_0133562
321 Ga0395898_0382090
322 Ga0395898_0383573
323 Ga0395905_0001067
324 Ga0395905_0001860
325 Ga0395905_0213320
326 Ga0436364_0511146
327 Ga0436364_0881079
328 Ga0436364_1022479
329 Ga0395901_0153172
330 Ga0395901_0160979
331 Ga0436365_1270590
332 Ga0436360_0782938
333 Ga0436360_1168823
334 Ga0436361_0199921
335 Ga0436361_0586318
336 Ga0436361_0728004
337 Ga0436361_0962822
338 Ga0436361_1091519
339 Ga0436363_0968743
340 Ga0436363_1062590
341 Ga0436363_1438034
342 Ga0436362_0971618
343 Ga0436362_1093793
344 Ga0451577_0064734
345 Ga0466969_0282779
346 Ga0466977_0010581
347 Ga0453683_0060830
348 Ga0466966_0200648
349 Ga0466963_0151467
350 Ga0466963_0287930
351 Ga0466964_0004666
352 Ga0453684_0085061
353 Ga0466957_0022048
354 Ga0466959_0163158
355 Ga0466959_0268527
356 Ga0466967_0078767
357 Ga0466967_0150002
358 Ga0495630_0122711
359 Ga0495622_0086221
360 Ga0495633_0001479
361 Ga0496112_0063123
362 Ga0496121_0071613
363 Ga0496124_0009840
364 Ga0496125_0236677
365 Ga0496126_0447893
366 Ga0495682_0012172
367 Ga0501034_0277372
368 Ga0501047_0122541
369 Ga0501035_0009909
370 Ga0501035_0012756
371 Ga0501044_0000185
372 nmdc:mga03683_144_c1
373 nmdc:mga03n38_8593_c1
374 nmdc:mga0k408_471_c1
375 nmdc:mga0k408_84_c1
376 Ga0500643_001686
377 Ga0500555_000556
378 Ga0500556_0000939
379 2723876694
380 2881413994

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02673

BacA

Bacitracin resistance protein BacA

33

313

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.7184 4 259
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.6956 4 259
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.6231 4 259
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.5998 4 259
8su2-assembly1.cif.gz_A f96h epi-isozizaene synthase: complex with 3 mg2+ and risedronate 0.4112 137 231
ID Description Score Start End Superfamily
af_O00624_273_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4621 40 238 1.20.1250.20
af_O00624_273_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4441 40 238 1.20.1250.20
af_P38124_101_531_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4205 26 238 1.20.1250.20
6axoA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.3997 136 229 1.10.600.10
af_P38358_232_399_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.38 39 245 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2V2RZ88-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.8686 1 266 GO:0005886
GO:0046677
GO:0050380
AF-A0A2V2RZ88-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.8655 1 266 GO:0005886
GO:0046677
GO:0050380
AF-A0A239S8D5-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.8619 1 262 GO:0005886
GO:0008360
GO:0009252
GO:0046677
GO:0050380
GO:0071555
AF-A0A1H1P1J7-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.8558 1 266 GO:0005886
GO:0046677
GO:0050380
AF-A0A1H1P1J7-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.8527 1 266 GO:0005886
GO:0046677
GO:0050380

Map