F292491

General Info

Members Datasets Scaffolds Average Seq Length
190 135 190 200

Family's Representative Sequence

Representative Sequence 3300013102|Ga0157371_10288739|Ga0157371_102887391
Length 241
Sequence MSEKPYISIYFLSSATRKDCSAADWIGMLCVQVAKPIILLMASHTQVIQNLMNQFARLPGIGMRSAERIAFHLLKEREETAFALADAIRDVKTRIRHCSVCYNLTENDPCDICSDSSRDQGLVCIVEQPKDLLALEGAGLYKGVYHVLLGAIRPLDDIDAGDLTIEPLMRRLEGGTIRELIMGTNPTVEGDGTALYIQNEVGARFPHVSVTRLARGLPAGSNIEYANRNILADAISGRQRM

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 2.11
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.05
Rhizosphere 96.32
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3342904 2162886007 Bacteria 830
2 Ga0058863_11465899 3300004799 Bacteria 1133
3 Ga0065704_10319397 3300005289 Unclassified 855
4 Ga0065707_10086544 3300005295 Bacteria 5412
5 Ga0065707_10323273 3300005295 Bacteria 962
6 Ga0070670_100244046 3300005331 Bacteria 1564
7 Ga0070660_100649749 3300005339 Bacteria 883
8 Ga0070675_100552251 3300005354 Bacteria 1042
9 Ga0070671_100537217 3300005355 Bacteria 1008
10 Ga0070671_100554920 3300005355 Unclassified 991
11 Ga0070674_100039523 3300005356 Bacteria 3187
12 Ga0070659_100121115 3300005366 Unclassified 2119
13 Ga0070713_100468698 3300005436 Unclassified 1185
14 Ga0070678_100148357 3300005456 Bacteria 1886
15 Ga0070678_100237196 3300005456 Bacteria 1523
16 Ga0068867_100525436 3300005459 Bacteria 1021
17 Ga0068867_100714409 3300005459 Bacteria 886
18 Ga0068853_100239969 3300005539 Unclassified 1661
19 Ga0070665_100002006 3300005548 Bacteria 22897
20 Ga0070665_100127704 3300005548 Bacteria 2545
21 Ga0070665_100551353 3300005548 Unclassified 1165
22 Ga0068855_100399327 3300005563 Unclassified 1507
23 Ga0068857_100143301 3300005577 Unclassified 2161
24 Ga0068864_101105170 3300005618 Bacteria 789
25 Ga0068863_100660522 3300005841 Unclassified 1037
26 Ga0068860_100057265 3300005843 Bacteria 3705
27 Ga0068860_100612494 3300005843 Unclassified 1095
28 Ga0081455_10065226 3300005937 Bacteria 3046
29 Ga0081539_10003040 3300005985 Bacteria 21709
30 Ga0075428_100008941 3300006844 Bacteria 11116
31 Ga0075430_100625531 3300006846 Unclassified 888
32 Ga0075429_100479509 3300006880 Bacteria 1090
33 Ga0068865_100416934 3300006881 Bacteria 1103
34 Ga0097620_101048659 3300006931 Unclassified 896
35 Ga0105240_10902904 3300009093 Bacteria 950
36 Ga0111539_10034282 3300009094 Bacteria 6158
37 Ga0105245_10400311 3300009098 Bacteria 1372
38 Ga0105245_10720484 3300009098 Bacteria 1032
39 Ga0105245_11663158 3300009098 Unclassified 690
40 Ga0105247_10324408 3300009101 Bacteria 1075
41 Ga0114129_10253982 3300009147 Bacteria 2359
42 Ga0105241_10329169 3300009174 Bacteria 1320
43 Ga0105241_10573478 3300009174 Bacteria 1016
44 Ga0105242_10220193 3300009176 Bacteria 1696
45 Ga0105249_11388448 3300009553 Unclassified 774
46 Ga0105239_10052000 3300010375 Bacteria 4491
47 Ga0105239_10168719 3300010375 Bacteria 2447
48 Ga0105239_10522201 3300010375 Bacteria 1351
49 Ga0157373_10807050 3300013100 Bacteria 692
50 Ga0157371_10288739 3300013102 Unclassified 1186
51 Ga0157371_10547831 3300013102 Bacteria 857
52 Ga0157370_10136858 3300013104 Bacteria 2282
53 Ga0157369_10794052 3300013105 Bacteria 973
54 Ga0157369_10862562 3300013105 Unclassified 929
55 Ga0157369_10981653 3300013105 Bacteria 865
56 Ga0157374_10323973 3300013296 Bacteria 1527
57 Ga0157378_10712201 3300013297 Bacteria 1024
58 Ga0163162_10760931 3300013306 Unclassified 1087
59 Ga0157372_10120037 3300013307 Bacteria 3018
60 Ga0157372_10282663 3300013307 Unclassified 1929
61 Ga0157372_10526559 3300013307 Unclassified 1378
62 Ga0157372_10743938 3300013307 Unclassified 1140
63 Ga0157372_11083475 3300013307 Bacteria 927
64 Ga0157372_11418296 3300013307 Unclassified 801
65 Ga0157375_11569544 3300013308 Bacteria 778
66 Ga0157375_11610663 3300013308 Unclassified 768
67 Ga0163163_11014838 3300014325 Bacteria 893
68 Ga0157379_11008883 3300014968 Bacteria 794
69 Ga0213873_10017836 3300021358 Bacteria 1624
70 Ga0207680_10292258 3300025903 Unclassified 1134
71 Ga0207705_10005782 3300025909 Bacteria 9215
72 Ga0207657_10132770 3300025919 Unclassified 2039
73 Ga0207657_10242978 3300025919 Unclassified 1437
74 Ga0207657_10458225 3300025919 Bacteria 1000
75 Ga0207659_10030961 3300025926 Bacteria 3660
76 Ga0207659_10428982 3300025926 Bacteria 1110
77 Ga0207687_10669185 3300025927 Bacteria 879
78 Ga0207644_10234366 3300025931 Bacteria 1460
79 Ga0207690_10116572 3300025932 Unclassified 1932
80 Ga0207669_10450745 3300025937 Unclassified 1019
81 Ga0207691_10360517 3300025940 Bacteria 1243
82 Ga0207679_10387947 3300025945 Bacteria 1226
83 Ga0207651_10088412 3300025960 Bacteria 2259
84 Ga0207712_10204729 3300025961 Bacteria 1567
85 Ga0207712_11132003 3300025961 Unclassified 697
86 Ga0207658_10421606 3300025986 Unclassified 1177
87 Ga0207703_10917034 3300026035 Unclassified 839
88 Ga0207639_10196484 3300026041 Unclassified 1727
89 Ga0207639_10393966 3300026041 Unclassified 1246
90 Ga0207641_10646780 3300026088 Unclassified 1038
91 Ga0207648_10230711 3300026089 Bacteria 1647
92 Ga0207674_10002229 3300026116 Bacteria 24542
93 Ga0207683_10761716 3300026121 Unclassified 898
94 Ga0207698_11457382 3300026142 Viruses 700
95 Ga0207428_10666847 3300027907 Bacteria 746
96 Ga0268266_10001849 3300028379 Bacteria 23892
97 Ga0268266_10065581 3300028379 Bacteria 3139
98 Ga0268266_10630494 3300028379 Unclassified 1031
99 Ga0268264_10043487 3300028381 Bacteria 3722
100 Ga0265338_10010052 3300028800 Bacteria 11182
101 Ga0265338_10076203 3300028800 Bacteria 2842
102 Ga0265332_10025281 3300031238 Bacteria 2609
103 Ga0265325_10005596 3300031241 Bacteria 7741
104 Ga0265340_10215887 3300031247 Bacteria 860
105 Ga0265339_10000231 3300031249 Bacteria 45340
106 Ga0265339_10009357 3300031249 Bacteria 6164
107 Ga0265331_10000459 3300031250 Bacteria 39270
108 Ga0265327_10007092 3300031251 Bacteria 8763
109 Ga0307408_100128229 3300031548 Bacteria 1976
110 Ga0265313_10001742 3300031595 Bacteria 20004
111 Ga0265314_10000158 3300031711 Bacteria 102763
112 Ga0307410_10062850 3300031852 Bacteria 2546
113 Ga0307410_10220783 3300031852 Bacteria 1458
114 Ga0307406_10733954 3300031901 Bacteria 828
115 Ga0307409_100031504 3300031995 Bacteria 3829
116 Ga0307409_100044962 3300031995 Unclassified 3330
117 Ga0307409_100100461 3300031995 Bacteria 2398
118 Ga0307409_100115282 3300031995 Bacteria 2262
119 Ga0307416_101003269 3300032002 Unclassified 938
120 Ga0307416_101269169 3300032002 Bacteria 842
121 Ga0307411_10365110 3300032005 Bacteria 1182
122 Ga0307411_10831113 3300032005 Bacteria 816
123 Ga0307415_100534094 3300032126 Bacteria 1032
124 Ga0373935_0609888 3300035692 Unclassified 799
125 Ga0373937_0048558 3300036401 Bacteria 3885
126 Ga0436364_0602020 3300037853 Bacteria 644
127 Ga0436365_1316395 3300039437 Unclassified 740
128 Ga0436363_0162682 3300039450 Bacteria 874
129 Ga0436363_1618600 3300039450 Bacteria 657
130 Ga0439447_074660 3300041407 Bacteria 786
131 Ga0453684_0064289 3300044712 Bacteria 4688
132 Ga0453684_0641003 3300044712 Unclassified 1160
133 Ga0453684_0722865 3300044712 Bacteria 1080
134 Ga0495592_0249943 3300046454 Bacteria 1172
135 Ga0495580_0314713 3300046472 Unclassified 1064
136 Ga0495582_0386360 3300046473 Bacteria 807
137 Ga0495582_0520956 3300046473 Unclassified 687
138 Ga0495662_0075472 3300046476 Bacteria 1636
139 Ga0495662_0077375 3300046476 Bacteria 1616
140 Ga0495608_0055781 3300046511 Unclassified 2611
141 Ga0495618_0064821 3300046514 Bacteria 2322
142 Ga0495630_0003910 3300046517 Bacteria 10415
143 Ga0495630_0136248 3300046517 Bacteria 1866
144 Ga0495666_0229784 3300046526 Unclassified 848
145 Ga0495665_0031488 3300046531 Unclassified 2839
146 Ga0495667_0226999 3300046559 Bacteria 1191
147 Ga0495667_0495767 3300046559 Unclassified 765
148 Ga0495634_0227097 3300046642 Bacteria 1150
149 Ga0495635_0008513 3300046663 Bacteria 7164
150 Ga0495599_0261409 3300046678 Bacteria 1051
151 Ga0495613_0159251 3300046689 Bacteria 1607
152 Ga0495624_0007607 3300046690 Bacteria 7605
153 Ga0495581_0191025 3300047315 Bacteria 1198
154 Ga0495674_0000839 3300047319 Bacteria 29332
155 Ga0495674_0458235 3300047319 Bacteria 1024
156 Ga0495680_0436916 3300047322 Unclassified 898
157 Ga0495684_0021370 3300047471 Unclassified 4982
158 Ga0495684_0152085 3300047471 Bacteria 1729
159 Ga0496114_0251817 3300048917 Bacteria 1554
160 Ga0496115_0031548 3300048918 Bacteria 4176
161 Ga0496126_0559166 3300048929 Bacteria 907
162 Ga0501298_070902 3300049521 Bacteria 752
163 Ga0501033_0016858 3300049570 Bacteria 5523
164 Ga0501034_0001011 3300049571 Bacteria 40323
165 Ga0501034_0004330 3300049571 Bacteria 15832
166 Ga0501034_0021961 3300049571 Bacteria 6503
167 Ga0501034_0022010 3300049571 Bacteria 6494
168 Ga0501034_0032390 3300049571 Bacteria 5308
169 Ga0501034_0172294 3300049571 Bacteria 2131
170 Ga0501043_0145349 3300049579 Bacteria 1857
171 Ga0501046_0038938 3300049580 Bacteria 3811
172 Ga0501047_0030660 3300049581 Bacteria 5183
173 Ga0501047_0036258 3300049581 Bacteria 4766
174 Ga0501047_0075685 3300049581 Bacteria 3239
175 Ga0501048_0106116 3300049582 Bacteria 1983
176 Ga0501070_0000338 3300049586 Bacteria 42579
177 Ga0501070_0230385 3300049586 Bacteria 1518
178 Ga0501071_0940419 3300049587 Unclassified 667
179 Ga0501080_0168412 3300049742 Bacteria 2021
180 Ga0501044_0000244 3300049823 Bacteria 68894
181 Ga0501044_0109814 3300049823 Bacteria 2767
182 nmdc:mga05p37_219390_c1 3300050507 Bacteria 2295
183 nmdc:mga09592_280498_c1 3300050508 Bacteria 1445
184 nmdc:mga0qj67_423907_c1 3300050509 Bacteria 1073
185 nmdc:mga06r32_253755_c1 3300050510 Unclassified 1746
186 nmdc:mga06r32_337572_c1 3300050510 Bacteria 1492
187 nmdc:mga08y16_120337_c1 3300050511 Bacteria 2732
188 Ga0587083_0107282 3300059505 Bacteria 704
189 Ga0587085_005462 3300059506 Bacteria 1498
190 Ga0587072_000610 3300059643 Bacteria 3772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0172294 Ga0501034_0172294_1592_2107 171
2 3300009553 Ga0105249_11388448 Ga0105249_113884482 176
3 3300025961 Ga0207712_11132003 Ga0207712_111320031 187
4 3300046476 Ga0495662_0077375 Ga0495662_0077375_850_1419 187
5 3300046517 Ga0495630_0136248 Ga0495630_0136248_975_1544 187
6 3300046642 Ga0495634_0227097 Ga0495634_0227097_311_880 187
7 3300013308 Ga0157375_11610663 Ga0157375_116106631 188
8 3300048918 Ga0496115_0031548 Ga0496115_0031548_335_901 188
9 3300025903 Ga0207680_10292258 Ga0207680_102922581 189
10 3300013297 Ga0157378_10712201 Ga0157378_107122012 193
11 3300005618 Ga0068864_101105170 Ga0068864_1011051702 197
12 3300005937 Ga0081455_10065226 Ga0081455_100652262 197
13 3300010375 Ga0105239_10168719 Ga0105239_101687192 197
14 3300049570 Ga0501033_0016858 Ga0501033_0016858_4136_4729 197
15 3300049571 Ga0501034_0022010 Ga0501034_0022010_2262_2855 197
16 3300049579 Ga0501043_0145349 Ga0501043_0145349_1170_1763 197
17 3300049580 Ga0501046_0038938 Ga0501046_0038938_3146_3739 197
18 3300049581 Ga0501047_0036258 Ga0501047_0036258_702_1295 197
19 3300049581 Ga0501047_0075685 Ga0501047_0075685_2610_3203 197
20 3300049582 Ga0501048_0106116 Ga0501048_0106116_1042_1635 197
21 3300049586 Ga0501070_0000338 Ga0501070_0000338_40707_41300 197
22 3300049823 Ga0501044_0109814 Ga0501044_0109814_71_664 197
23 3300005355 Ga0070671_100537217 Ga0070671_1005372171 198
24 3300005548 Ga0070665_100551353 Ga0070665_1005513532 198
25 3300005843 Ga0068860_100612494 Ga0068860_1006124942 198
26 3300006846 Ga0075430_100625531 Ga0075430_1006255312 198
27 3300006881 Ga0068865_100416934 Ga0068865_1004169342 198
28 3300009093 Ga0105240_10902904 Ga0105240_109029042 198
29 3300009098 Ga0105245_11663158 Ga0105245_116631581 198
30 3300009101 Ga0105247_10324408 Ga0105247_103244081 198
31 3300013307 Ga0157372_10282663 Ga0157372_102826632 198
32 3300014968 Ga0157379_11008883 Ga0157379_110088831 198
33 3300025986 Ga0207658_10421606 Ga0207658_104216062 198
34 3300026035 Ga0207703_10917034 Ga0207703_109170342 198
35 3300028379 Ga0268266_10630494 Ga0268266_106304942 198
36 3300031548 Ga0307408_100128229 Ga0307408_1001282291 198
37 3300031852 Ga0307410_10062850 Ga0307410_100628502 198
38 3300031852 Ga0307410_10220783 Ga0307410_102207831 198
39 3300031995 Ga0307409_100031504 Ga0307409_1000315044 198
40 3300031995 Ga0307409_100044962 Ga0307409_1000449622 198
41 3300031995 Ga0307409_100100461 Ga0307409_1001004612 198
42 3300031995 Ga0307409_100115282 Ga0307409_1001152822 198
43 3300032002 Ga0307416_101003269 Ga0307416_1010032692 198
44 3300032005 Ga0307411_10365110 Ga0307411_103651102 198
45 3300032126 Ga0307415_100534094 Ga0307415_1005340941 198
46 3300044712 Ga0453684_0064289 Ga0453684_0064289_2535_3140 198
47 3300046689 Ga0495613_0159251 Ga0495613_0159251_483_1085 198
48 3300047319 Ga0495674_0458235 Ga0495674_0458235_99_701 198
49 2162886007 SwRhRL2b_contig_3342904 SwRhRL2b_0820.00002350 199
50 3300004799 Ga0058863_11465899 Ga0058863_114658992 199
51 3300005289 Ga0065704_10319397 Ga0065704_103193971 199
52 3300005295 Ga0065707_10086544 Ga0065707_100865447 199
53 3300005295 Ga0065707_10323273 Ga0065707_103232732 199
54 3300005331 Ga0070670_100244046 Ga0070670_1002440462 199
55 3300005339 Ga0070660_100649749 Ga0070660_1006497491 199
56 3300005354 Ga0070675_100552251 Ga0070675_1005522511 199
57 3300005355 Ga0070671_100554920 Ga0070671_1005549202 199
58 3300005356 Ga0070674_100039523 Ga0070674_1000395233 199
59 3300005366 Ga0070659_100121115 Ga0070659_1001211151 199
60 3300005436 Ga0070713_100468698 Ga0070713_1004686982 199
61 3300005456 Ga0070678_100148357 Ga0070678_1001483572 199
62 3300005456 Ga0070678_100237196 Ga0070678_1002371962 199
63 3300005459 Ga0068867_100525436 Ga0068867_1005254361 199
64 3300005459 Ga0068867_100714409 Ga0068867_1007144091 199
65 3300005539 Ga0068853_100239969 Ga0068853_1002399693 199
66 3300005548 Ga0070665_100002006 Ga0070665_1000020062 199
67 3300005548 Ga0070665_100127704 Ga0070665_1001277042 199
68 3300005563 Ga0068855_100399327 Ga0068855_1003993273 199
69 3300005577 Ga0068857_100143301 Ga0068857_1001433013 199
70 3300005841 Ga0068863_100660522 Ga0068863_1006605221 199
71 3300005843 Ga0068860_100057265 Ga0068860_1000572652 199
72 3300005985 Ga0081539_10003040 Ga0081539_100030402 199
73 3300006844 Ga0075428_100008941 Ga0075428_1000089416 199
74 3300006880 Ga0075429_100479509 Ga0075429_1004795092 199
75 3300006931 Ga0097620_101048659 Ga0097620_1010486592 199
76 3300009094 Ga0111539_10034282 Ga0111539_100342824 199
77 3300009098 Ga0105245_10400311 Ga0105245_104003111 199
78 3300009098 Ga0105245_10720484 Ga0105245_107204841 199
79 3300009147 Ga0114129_10253982 Ga0114129_102539822 199
80 3300009174 Ga0105241_10329169 Ga0105241_103291692 199
81 3300009174 Ga0105241_10573478 Ga0105241_105734782 199
82 3300009176 Ga0105242_10220193 Ga0105242_102201932 199
83 3300010375 Ga0105239_10052000 Ga0105239_100520005 199
84 3300010375 Ga0105239_10522201 Ga0105239_105222011 199
85 3300013100 Ga0157373_10807050 Ga0157373_108070501 199
86 3300013102 Ga0157371_10288739 Ga0157371_102887391 199
87 3300013102 Ga0157371_10547831 Ga0157371_105478311 199
88 3300013104 Ga0157370_10136858 Ga0157370_101368582 199
89 3300013105 Ga0157369_10794052 Ga0157369_107940522 199
90 3300013105 Ga0157369_10862562 Ga0157369_108625621 199
91 3300013105 Ga0157369_10981653 Ga0157369_109816532 199
92 3300013296 Ga0157374_10323973 Ga0157374_103239732 199
93 3300013306 Ga0163162_10760931 Ga0163162_107609311 199
94 3300013307 Ga0157372_10120037 Ga0157372_101200373 199
95 3300013307 Ga0157372_10526559 Ga0157372_105265591 199
96 3300013307 Ga0157372_10743938 Ga0157372_107439382 199
97 3300013307 Ga0157372_11083475 Ga0157372_110834752 199
98 3300013307 Ga0157372_11418296 Ga0157372_114182961 199
99 3300013308 Ga0157375_11569544 Ga0157375_115695441 199
100 3300014325 Ga0163163_11014838 Ga0163163_110148381 199
101 3300021358 Ga0213873_10017836 Ga0213873_100178362 199
102 3300025909 Ga0207705_10005782 Ga0207705_100057827 199
103 3300025919 Ga0207657_10132770 Ga0207657_101327702 199
104 3300025919 Ga0207657_10242978 Ga0207657_102429781 199
105 3300025919 Ga0207657_10458225 Ga0207657_104582252 199
106 3300025926 Ga0207659_10030961 Ga0207659_100309613 199
107 3300025926 Ga0207659_10428982 Ga0207659_104289822 199
108 3300025927 Ga0207687_10669185 Ga0207687_106691851 199
109 3300025931 Ga0207644_10234366 Ga0207644_102343662 199
110 3300025932 Ga0207690_10116572 Ga0207690_101165722 199
111 3300025937 Ga0207669_10450745 Ga0207669_104507452 199
112 3300025940 Ga0207691_10360517 Ga0207691_103605172 199
113 3300025945 Ga0207679_10387947 Ga0207679_103879472 199
114 3300025960 Ga0207651_10088412 Ga0207651_100884122 199
115 3300025961 Ga0207712_10204729 Ga0207712_102047292 199
116 3300026041 Ga0207639_10196484 Ga0207639_101964843 199
117 3300026041 Ga0207639_10393966 Ga0207639_103939662 199
118 3300026088 Ga0207641_10646780 Ga0207641_106467801 199
119 3300026089 Ga0207648_10230711 Ga0207648_102307111 199
120 3300026116 Ga0207674_10002229 Ga0207674_100022295 199
121 3300026121 Ga0207683_10761716 Ga0207683_107617161 199
122 3300026142 Ga0207698_11457382 Ga0207698_114573821 199
123 3300027907 Ga0207428_10666847 Ga0207428_106668471 199
124 3300028379 Ga0268266_10001849 Ga0268266_100018492 199
125 3300028379 Ga0268266_10065581 Ga0268266_100655813 199
126 3300028381 Ga0268264_10043487 Ga0268264_100434873 199
127 3300028800 Ga0265338_10010052 Ga0265338_100100522 199
128 3300028800 Ga0265338_10076203 Ga0265338_100762031 199
129 3300031238 Ga0265332_10025281 Ga0265332_100252813 199
130 3300031241 Ga0265325_10005596 Ga0265325_100055965 199
131 3300031247 Ga0265340_10215887 Ga0265340_102158872 199
132 3300031249 Ga0265339_10000231 Ga0265339_1000023116 199
133 3300031249 Ga0265339_10009357 Ga0265339_100093574 199
134 3300031250 Ga0265331_10000459 Ga0265331_1000045917 199
135 3300031251 Ga0265327_10007092 Ga0265327_100070929 199
136 3300031595 Ga0265313_10001742 Ga0265313_1000174215 199
137 3300031711 Ga0265314_10000158 Ga0265314_1000015883 199
138 3300031901 Ga0307406_10733954 Ga0307406_107339541 199
139 3300032002 Ga0307416_101269169 Ga0307416_1012691692 199
140 3300032005 Ga0307411_10831113 Ga0307411_108311131 199
141 3300035692 Ga0373935_0609888 Ga0373935_0609888_93_692 199
142 3300036401 Ga0373937_0048558 Ga0373937_0048558_2156_2761 199
143 3300037853 Ga0436364_0602020 Ga0436364_0602020_17_622 199
144 3300039437 Ga0436365_1316395 Ga0436365_1316395_50_655 199
145 3300039450 Ga0436363_0162682 Ga0436363_0162682_148_753 199
146 3300039450 Ga0436363_1618600 Ga0436363_1618600_33_638 199
147 3300041407 Ga0439447_074660 Ga0439447_074660_67_675 199
148 3300044712 Ga0453684_0641003 Ga0453684_0641003_305_910 199
149 3300044712 Ga0453684_0722865 Ga0453684_0722865_11_616 199
150 3300046454 Ga0495592_0249943 Ga0495592_0249943_544_1149 199
151 3300046472 Ga0495580_0314713 Ga0495580_0314713_337_942 199
152 3300046473 Ga0495582_0386360 Ga0495582_0386360_26_631 199
153 3300046473 Ga0495582_0520956 Ga0495582_0520956_50_655 199
154 3300046476 Ga0495662_0075472 Ga0495662_0075472_920_1525 199
155 3300046511 Ga0495608_0055781 Ga0495608_0055781_1987_2592 199
156 3300046514 Ga0495618_0064821 Ga0495618_0064821_1588_2193 199
157 3300046517 Ga0495630_0003910 Ga0495630_0003910_5937_6542 199
158 3300046526 Ga0495666_0229784 Ga0495666_0229784_222_827 199
159 3300046531 Ga0495665_0031488 Ga0495665_0031488_1806_2411 199
160 3300046559 Ga0495667_0226999 Ga0495667_0226999_438_1043 199
161 3300046559 Ga0495667_0495767 Ga0495667_0495767_34_639 199
162 3300046663 Ga0495635_0008513 Ga0495635_0008513_1379_1984 199
163 3300046678 Ga0495599_0261409 Ga0495599_0261409_317_922 199
164 3300046690 Ga0495624_0007607 Ga0495624_0007607_5440_6045 199
165 3300047315 Ga0495581_0191025 Ga0495581_0191025_366_971 199
166 3300047319 Ga0495674_0000839 Ga0495674_0000839_22407_23012 199
167 3300047322 Ga0495680_0436916 Ga0495680_0436916_183_788 199
168 3300047471 Ga0495684_0021370 Ga0495684_0021370_1074_1679 199
169 3300047471 Ga0495684_0152085 Ga0495684_0152085_1088_1693 199
170 3300048917 Ga0496114_0251817 Ga0496114_0251817_246_845 199
171 3300048929 Ga0496126_0559166 Ga0496126_0559166_190_795 199
172 3300049521 Ga0501298_070902 Ga0501298_070902_97_705 199
173 3300049571 Ga0501034_0001011 Ga0501034_0001011_35283_35888 199
174 3300049571 Ga0501034_0004330 Ga0501034_0004330_1869_2468 199
175 3300049571 Ga0501034_0021961 Ga0501034_0021961_971_1576 199
176 3300049571 Ga0501034_0032390 Ga0501034_0032390_40_639 199
177 3300049581 Ga0501047_0030660 Ga0501047_0030660_1032_1637 199
178 3300049586 Ga0501070_0230385 Ga0501070_0230385_29_628 199
179 3300049587 Ga0501071_0940419 Ga0501071_0940419_20_619 199
180 3300049742 Ga0501080_0168412 Ga0501080_0168412_1008_1613 199
181 3300049823 Ga0501044_0000244 Ga0501044_0000244_14583_15188 199
182 3300050507 nmdc:mga05p37_219390_c1 nmdc:mga05p37_219390_c1_1111_1710 199
183 3300050508 nmdc:mga09592_280498_c1 nmdc:mga09592_280498_c1_538_1146 199
184 3300050509 nmdc:mga0qj67_423907_c1 nmdc:mga0qj67_423907_c1_40_648 199
185 3300050510 nmdc:mga06r32_253755_c1 nmdc:mga06r32_253755_c1_856_1455 199
186 3300050510 nmdc:mga06r32_337572_c1 nmdc:mga06r32_337572_c1_470_1078 199
187 3300050511 nmdc:mga08y16_120337_c1 nmdc:mga08y16_120337_c1_1437_2042 199
188 3300059505 Ga0587083_0107282 Ga0587083_0107282_65_670 199
189 3300059506 Ga0587085_005462 Ga0587085_005462_783_1382 199
190 3300059643 Ga0587072_000610 Ga0587072_000610_1832_2431 199

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02132

RecR_ZnF

RecR, Cys4-zinc finger motif

95

115

0.98

PF21176

RecR_HhH

RecR, helix-hairpin-helix

48

92

0.96

PF13662

Toprim_4

Toprim domain

121

214

0.94

PF01751

Toprim

Toprim domain

122

213

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.9407 81 172
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.9308 81 172
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.875 19 199
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.8704 19 199
8ab0-assembly1.cif.gz_F complex of reco-recr-dna from thermus thermophilus. 0.8517 5 170
ID Description Score Start End Superfamily
af_P9WHI3_76_174_3.40.1360.10 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9826 78 170 3.40.1360.10
3ve5A03 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9797 78 199 3.40.1360.10
3ve5A03 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9719 78 199 3.40.1360.10
3vdpC01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9594 5 53 1.10.8.420
3vdpA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.954 5 53 1.10.8.420
ID Description Score Start End GO Terms
AF-W1XYN8-F1-model_v4 Recombination protein RecR 0.9876 40 153 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A268RH89-F1-model_v4 Recombination protein RecR 0.9854 72 174 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-W1XYN8-F1-model_v4 Recombination protein RecR 0.9707 40 153 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-K1SVU7-F1-model_v4 Recombination protein RecR 0.9688 6 174 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A268RH89-F1-model_v4 Recombination protein RecR 0.9668 72 174 GO:0003677
GO:0006281
GO:0006310
GO:0046872

Feature Viewer

pLDDT pTM Quality
93.89 0.83 High
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Predicted Structure (AlphaFold2)

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