F291013

General Info

Members Datasets Scaffolds Average Seq Length
189 131 378 268

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10016716|Ga0213876_100167161
Length 270
Sequence VTSTRTRRLAVVTGASSGIGFELARQFAEHGYDLIIAAEDEAINRAATELQNGTTVEAVQVDLATSDGVEQLYERIRRHGDQIEAVALNAGIGMGGDFATQTDLDQELKLVDLNVRSTVHLAKRVVADMVRRGEGKLLFTSSIASTMPGTYQAVYNASKSFVQSFALALRAELKDTGVTVTSLMPGPTDTEFFERADMMDTKIGTSDAKDDPADVARDGFEALMAGEERVVSHSLSTKAQGHGSRLMPDSVKAELHRKMAEPGSGDEKLT

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009828 Sorghum rhizosphere soil microbial communities in Albany, CA(condition:control)- sample E Metatranscriptome Rhizosphere
47 3300009829 Sorghum rhizosphere soil microbial communities under drought stress in Albany, CA - sample D Metatranscriptome Rhizosphere
48 3300009835 Sorghum rhizosphere soil microbial communities under drought stress in Albany, CA - sample B Metatranscriptome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
64 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.65
Metatranscriptomes 6.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.94
Rhizosphere 84.66
Stem 0
Stem Tuber 0
Unclassified 8.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10016716 3300021384 Bacteria 3877
2 Ga0007429J51699_1057412 3300003579 Bacteria 855
3 Ga0007429J51699_1098533 3300003579 Bacteria 932
4 Ga0065712_10112681 3300005290 Bacteria 1794
5 Ga0065715_10180040 3300005293 Bacteria 1483
6 Ga0070658_10029354 3300005327 Bacteria 4417
7 Ga0070683_100149546 3300005329 Unclassified 2214
8 Ga0070683_100433112 3300005329 Bacteria 1255
9 Ga0070680_100101299 3300005336 Unclassified 2391
10 Ga0070682_100095106 3300005337 Bacteria 1956
11 Ga0068868_100238471 3300005338 Bacteria 1527
12 Ga0068868_100498968 3300005338 Bacteria 1066
13 Ga0070660_100312181 3300005339 Bacteria 1290
14 Ga0070661_100020156 3300005344 Bacteria 4754
15 Ga0070675_100000078 3300005354 Bacteria 56469
16 Ga0070673_100229181 3300005364 Bacteria 1611
17 Ga0070659_100091362 3300005366 Bacteria 2440
18 Ga0070714_100180615 3300005435 Bacteria 1920
19 Ga0070713_100523853 3300005436 Unclassified 1120
20 Ga0070662_100103119 3300005457 Bacteria 2162
21 Ga0070681_10721335 3300005458 Unclassified 913
22 Ga0070685_10322009 3300005466 Bacteria 1048
23 Ga0070679_100146745 3300005530 Unclassified 2336
24 Ga0070684_100042576 3300005535 Bacteria 3921
25 Ga0070684_100131648 3300005535 Bacteria 2256
26 Ga0068853_100042247 3300005539 Bacteria 3897
27 Ga0070695_100126611 3300005545 Bacteria 1755
28 Ga0070693_100108967 3300005547 Bacteria 1700
29 Ga0070665_100058064 3300005548 Bacteria 3879
30 Ga0068855_100053948 3300005563 Bacteria 4728
31 Ga0070664_100065597 3300005564 Bacteria 3098
32 Ga0070664_100162727 3300005564 Bacteria 1975
33 Ga0070664_100475964 3300005564 Bacteria 1149
34 Ga0068857_100629957 3300005577 Unclassified 1015
35 Ga0068854_100127338 3300005578 Bacteria 1941
36 Ga0068856_100069456 3300005614 Bacteria 3483
37 Ga0068856_100205224 3300005614 Bacteria 1985
38 Ga0068852_100230795 3300005616 Bacteria 1764
39 Ga0068852_100323321 3300005616 Unclassified 1499
40 Ga0068852_100546868 3300005616 Bacteria 1158
41 Ga0068864_100348186 3300005618 Bacteria 1397
42 Ga0068851_10021093 3300005834 Bacteria 3161
43 Ga0081538_10005892 3300005981 Bacteria 10920
44 Ga0097621_100504640 3300006237 Bacteria 1096
45 Ga0068871_100239744 3300006358 Bacteria 1576
46 Ga0075428_100078166 3300006844 Bacteria 3612
47 Ga0075430_100003116 3300006846 Bacteria 13865
48 Ga0075431_100054450 3300006847 Bacteria 4125
49 Ga0068865_100000061 3300006881 Bacteria 57211
50 Ga0105240_10208247 3300009093 Bacteria 2287
51 Ga0105240_10303389 3300009093 Bacteria 1826
52 Ga0105245_10980940 3300009098 Bacteria 889
53 Ga0114129_10947058 3300009147 Bacteria 1088
54 Ga0105248_10088766 3300009177 Bacteria 3480
55 Ga0105238_10133091 3300009551 Bacteria 2465
56 Ga0130087_1056466 3300009828 Bacteria 1858
57 Ga0130086_1023630 3300009829 Bacteria 1858
58 Ga0130084_1077230 3300009835 Bacteria 1858
59 Ga0157373_10058881 3300013100 Bacteria 2722
60 Ga0157371_10044454 3300013102 Bacteria 3162
61 Ga0157369_10015998 3300013105 Bacteria 8442
62 Ga0157374_10069990 3300013296 Bacteria 3305
63 Ga0157374_10170655 3300013296 Bacteria 2122
64 Ga0157378_10012236 3300013297 Bacteria 7514
65 Ga0157378_10052758 3300013297 Bacteria 3618
66 Ga0157372_10305231 3300013307 Bacteria 1852
67 Ga0163163_10224023 3300014325 Bacteria 1929
68 Ga0157377_10271432 3300014745 Bacteria 1108
69 Ga0182006_1134371 3300015261 Unclassified 849
70 Ga0182007_10009694 3300015262 Bacteria 3860
71 Ga0182005_1003128 3300015265 Bacteria 5691
72 Ga0197907_10327162 3300020069 Bacteria 939
73 Ga0206356_10568478 3300020070 Bacteria 1527
74 Ga0206349_1386740 3300020075 Bacteria 1889
75 Ga0206355_1119558 3300020076 Unclassified 1143
76 Ga0206352_10239636 3300020078 Unclassified 1145
77 Ga0206353_11725796 3300020082 Unclassified 1168
78 Ga0213874_10000115 3300021377 Bacteria 13268
79 Ga0213876_10006798 3300021384 Bacteria 6247
80 Ga0213875_10062655 3300021388 Bacteria 1739
81 Ga0224712_10180331 3300022467 Unclassified 951
82 Ga0207656_10014100 3300025321 Bacteria 3072
83 Ga0207643_10195344 3300025908 Bacteria 1230
84 Ga0207707_10067694 3300025912 Bacteria 3110
85 Ga0207695_10463055 3300025913 Unclassified 1151
86 Ga0207660_10174934 3300025917 Bacteria 1664
87 Ga0207657_10005515 3300025919 Bacteria 13210
88 Ga0207659_10000018 3300025926 Bacteria 156920
89 Ga0207664_10204991 3300025929 Bacteria 1704
90 Ga0207644_10341626 3300025931 Unclassified 1214
91 Ga0207690_10017754 3300025932 Bacteria 4351
92 Ga0207706_10012878 3300025933 Bacteria 7612
93 Ga0207704_10000026 3300025938 Bacteria 123892
94 Ga0207661_10026141 3300025944 Bacteria 4444
95 Ga0207661_10217298 3300025944 Bacteria 1688
96 Ga0207679_10138549 3300025945 Bacteria 1963
97 Ga0207667_10105745 3300025949 Bacteria 2903
98 Ga0207651_10206374 3300025960 Bacteria 1579
99 Ga0207677_10088396 3300026023 Bacteria 2246
100 Ga0207639_10152301 3300026041 Bacteria 1938
101 Ga0207678_10212982 3300026067 Bacteria 1653
102 Ga0207678_10224261 3300026067 Bacteria 1609
103 Ga0207702_10277335 3300026078 Bacteria 1583
104 Ga0207702_10289961 3300026078 Bacteria 1550
105 Ga0207702_10408108 3300026078 Unclassified 1311
106 Ga0207674_10119340 3300026116 Bacteria 2606
107 Ga0207698_10188898 3300026142 Bacteria 1833
108 Ga0207698_10194942 3300026142 Unclassified 1808
109 Ga0307413_10014417 3300031824 Bacteria 4014
110 Ga0307413_10422510 3300031824 Bacteria 1050
111 Ga0307410_10022413 3300031852 Bacteria 3904
112 Ga0307410_10283864 3300031852 Bacteria 1300
113 Ga0307410_10350063 3300031852 Bacteria 1180
114 Ga0307406_10005277 3300031901 Bacteria 7064
115 Ga0307409_100029345 3300031995 Bacteria 3935
116 Ga0307409_100044079 3300031995 Bacteria 3357
117 Ga0307409_100125844 3300031995 Bacteria 2180
118 Ga0307409_100194669 3300031995 Bacteria 1808
119 Ga0307409_100205985 3300031995 Bacteria 1764
120 Ga0307409_100337657 3300031995 Bacteria 1416
121 Ga0307416_100013641 3300032002 Bacteria 5533
122 Ga0307411_10425010 3300032005 Bacteria 1105
123 Ga0395898_0068595 3300037466 Bacteria 3432
124 Ga0436364_0563246 3300037853 Bacteria 3969
125 Ga0395901_0348103 3300038443 Bacteria 1530
126 Ga0436365_0175985 3300039437 Bacteria 2988
127 Ga0436365_1242027 3300039437 Bacteria 9266
128 Ga0436365_1376936 3300039437 Bacteria 4907
129 Ga0436363_0371778 3300039450 Bacteria 7043
130 Ga0436363_0425289 3300039450 Bacteria 27969
131 Ga0436363_0896044 3300039450 Bacteria 1236
132 Ga0436363_0913449 3300039450 Bacteria 7593
133 Ga0436363_1502575 3300039450 Bacteria 10809
134 Ga0436362_0777149 3300039453 Bacteria 1846
135 Ga0466966_0063242 3300044684 Bacteria 2332
136 Ga0466961_0034581 3300044693 Bacteria 3244
137 Ga0466963_0000435 3300044694 Bacteria 19310
138 Ga0466963_0028080 3300044694 Bacteria 3609
139 Ga0466963_0066269 3300044694 Bacteria 2422
140 Ga0466963_0069826 3300044694 Bacteria 2362
141 Ga0466963_0090800 3300044694 Bacteria 2080
142 Ga0466963_0210784 3300044694 Bacteria 1359
143 Ga0466971_0033549 3300044719 Bacteria 2300
144 Ga0466968_0075501 3300044735 Bacteria 1474
145 Ga0466968_0106296 3300044735 Bacteria 1258
146 Ga0466970_0035549 3300044765 Bacteria 2639
147 Ga0466970_0213979 3300044765 Bacteria 1074
148 Ga0466957_0041050 3300044842 Bacteria 2798
149 Ga0466960_0023371 3300044901 Bacteria 2775
150 Ga0466959_0062741 3300045049 Bacteria 2700
151 Ga0466958_0044632 3300045836 Bacteria 2671
152 Ga0466958_0065170 3300045836 Bacteria 2223
153 Ga0466958_0071185 3300045836 Bacteria 2129
154 Ga0466967_0000040 3300045976 Bacteria 46660
155 Ga0466967_0000503 3300045976 Bacteria 19151
156 Ga0466967_0077398 3300045976 Bacteria 2994
157 Ga0466967_0180072 3300045976 Bacteria 1993
158 Ga0466967_0196451 3300045976 Bacteria 1909
159 Ga0466967_0212787 3300045976 Bacteria 1834
160 Ga0466967_0257193 3300045976 Bacteria 1670
161 Ga0466967_0271098 3300045976 Bacteria 1626
162 Ga0466967_0369929 3300045976 Bacteria 1390
163 Ga0466967_0689257 3300045976 Bacteria 1011
164 Ga0496102_0090770 3300048905 Bacteria 2827
165 Ga0496103_0026703 3300048906 Bacteria 3495
166 Ga0496104_0009461 3300048907 Bacteria 8669
167 Ga0496104_0163245 3300048907 Bacteria 2136
168 Ga0496108_0000266 3300048911 Bacteria 44912
169 Ga0496108_0016984 3300048911 Bacteria 5949
170 Ga0496109_0001540 3300048912 Bacteria 19168
171 Ga0496109_0135393 3300048912 Bacteria 2301
172 Ga0496110_0095310 3300048913 Bacteria 2665
173 Ga0496111_0002660 3300048914 Bacteria 10835
174 Ga0496112_0014732 3300048915 Bacteria 7270
175 Ga0496112_0041326 3300048915 Bacteria 4511
176 Ga0496112_0100784 3300048915 Bacteria 2857
177 Ga0496113_0025261 3300048916 Bacteria 4232
178 Ga0496113_0138480 3300048916 Bacteria 1914
179 Ga0496124_0319227 3300048927 Bacteria 1113
180 Ga0501034_0599342 3300049571 Bacteria 1007
181 Ga0501047_0029990 3300049581 Bacteria 5244
182 Ga0501047_0037313 3300049581 Bacteria 4699
183 Ga0501048_0490560 3300049582 Bacteria 881
184 Ga0501074_0036375 3300049590 Bacteria 3566
185 Ga0501044_0127177 3300049823 Bacteria 2545
186 nmdc:mga0qj67_11064_c1 3300050509 Bacteria 6756
187 nmdc:mga06r32_17950_c1 3300050510 Bacteria 6469
188 Ga0466962_0004124 3300061719 Bacteria 6960
189 Ga0466962_0008974 3300061719 Bacteria 4790
190 Ga0213876_10016716
191 Ga0007429J51699_1057412
192 Ga0007429J51699_1098533
193 Ga0065712_10112681
194 Ga0065715_10180040
195 Ga0070658_10029354
196 Ga0070683_100149546
197 Ga0070683_100433112
198 Ga0070680_100101299
199 Ga0070682_100095106
200 Ga0068868_100238471
201 Ga0068868_100498968
202 Ga0070660_100312181
203 Ga0070661_100020156
204 Ga0070675_100000078
205 Ga0070673_100229181
206 Ga0070659_100091362
207 Ga0070714_100180615
208 Ga0070713_100523853
209 Ga0070662_100103119
210 Ga0070681_10721335
211 Ga0070685_10322009
212 Ga0070679_100146745
213 Ga0070684_100042576
214 Ga0070684_100131648
215 Ga0068853_100042247
216 Ga0070695_100126611
217 Ga0070693_100108967
218 Ga0070665_100058064
219 Ga0068855_100053948
220 Ga0070664_100065597
221 Ga0070664_100162727
222 Ga0070664_100475964
223 Ga0068857_100629957
224 Ga0068854_100127338
225 Ga0068856_100069456
226 Ga0068856_100205224
227 Ga0068852_100230795
228 Ga0068852_100323321
229 Ga0068852_100546868
230 Ga0068864_100348186
231 Ga0068851_10021093
232 Ga0081538_10005892
233 Ga0097621_100504640
234 Ga0068871_100239744
235 Ga0075428_100078166
236 Ga0075430_100003116
237 Ga0075431_100054450
238 Ga0068865_100000061
239 Ga0105240_10208247
240 Ga0105240_10303389
241 Ga0105245_10980940
242 Ga0114129_10947058
243 Ga0105248_10088766
244 Ga0105238_10133091
245 Ga0130087_1056466
246 Ga0130086_1023630
247 Ga0130084_1077230
248 Ga0157373_10058881
249 Ga0157371_10044454
250 Ga0157369_10015998
251 Ga0157374_10069990
252 Ga0157374_10170655
253 Ga0157378_10012236
254 Ga0157378_10052758
255 Ga0157372_10305231
256 Ga0163163_10224023
257 Ga0157377_10271432
258 Ga0182006_1134371
259 Ga0182007_10009694
260 Ga0182005_1003128
261 Ga0197907_10327162
262 Ga0206356_10568478
263 Ga0206349_1386740
264 Ga0206355_1119558
265 Ga0206352_10239636
266 Ga0206353_11725796
267 Ga0213874_10000115
268 Ga0213876_10006798
269 Ga0213875_10062655
270 Ga0224712_10180331
271 Ga0207656_10014100
272 Ga0207643_10195344
273 Ga0207707_10067694
274 Ga0207695_10463055
275 Ga0207660_10174934
276 Ga0207657_10005515
277 Ga0207659_10000018
278 Ga0207664_10204991
279 Ga0207644_10341626
280 Ga0207690_10017754
281 Ga0207706_10012878
282 Ga0207704_10000026
283 Ga0207661_10026141
284 Ga0207661_10217298
285 Ga0207679_10138549
286 Ga0207667_10105745
287 Ga0207651_10206374
288 Ga0207677_10088396
289 Ga0207639_10152301
290 Ga0207678_10212982
291 Ga0207678_10224261
292 Ga0207702_10277335
293 Ga0207702_10289961
294 Ga0207702_10408108
295 Ga0207674_10119340
296 Ga0207698_10188898
297 Ga0207698_10194942
298 Ga0307413_10014417
299 Ga0307413_10422510
300 Ga0307410_10022413
301 Ga0307410_10283864
302 Ga0307410_10350063
303 Ga0307406_10005277
304 Ga0307409_100029345
305 Ga0307409_100044079
306 Ga0307409_100125844
307 Ga0307409_100194669
308 Ga0307409_100205985
309 Ga0307409_100337657
310 Ga0307416_100013641
311 Ga0307411_10425010
312 Ga0395898_0068595
313 Ga0436364_0563246
314 Ga0395901_0348103
315 Ga0436365_0175985
316 Ga0436365_1242027
317 Ga0436365_1376936
318 Ga0436363_0371778
319 Ga0436363_0425289
320 Ga0436363_0896044
321 Ga0436363_0913449
322 Ga0436363_1502575
323 Ga0436362_0777149
324 Ga0466966_0063242
325 Ga0466961_0034581
326 Ga0466963_0000435
327 Ga0466963_0028080
328 Ga0466963_0066269
329 Ga0466963_0069826
330 Ga0466963_0090800
331 Ga0466963_0210784
332 Ga0466971_0033549
333 Ga0466968_0075501
334 Ga0466968_0106296
335 Ga0466970_0035549
336 Ga0466970_0213979
337 Ga0466957_0041050
338 Ga0466960_0023371
339 Ga0466959_0062741
340 Ga0466958_0044632
341 Ga0466958_0065170
342 Ga0466958_0071185
343 Ga0466967_0000040
344 Ga0466967_0000503
345 Ga0466967_0077398
346 Ga0466967_0180072
347 Ga0466967_0196451
348 Ga0466967_0212787
349 Ga0466967_0257193
350 Ga0466967_0271098
351 Ga0466967_0369929
352 Ga0466967_0689257
353 Ga0496102_0090770
354 Ga0496103_0026703
355 Ga0496104_0009461
356 Ga0496104_0163245
357 Ga0496108_0000266
358 Ga0496108_0016984
359 Ga0496109_0001540
360 Ga0496109_0135393
361 Ga0496110_0095310
362 Ga0496111_0002660
363 Ga0496112_0014732
364 Ga0496112_0041326
365 Ga0496112_0100784
366 Ga0496113_0025261
367 Ga0496113_0138480
368 Ga0496124_0319227
369 Ga0501034_0599342
370 Ga0501047_0029990
371 Ga0501047_0037313
372 Ga0501048_0490560
373 Ga0501074_0036375
374 Ga0501044_0127177
375 nmdc:mga0qj67_11064_c1
376 nmdc:mga06r32_17950_c1
377 Ga0466962_0004124
378 Ga0466962_0008974

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

8

200

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

14

224

0.93

PF08659

KR

KR domain

9

189

0.82

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

10

195

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jap-assembly1.cif.gz_C clavulanic acid dehydrogenase: structural and biochemical analysis of the final step in the biosynthesis of the beta-lactamase inhibitor clavulanic acid 0.9112 9 233
8g9v-assembly4.cif.gz_G crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9095 8 245
8g93-assembly1.cif.gz_B crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9062 8 250
8sy8-assembly1.cif.gz_B-2 crystal structure of tsac 0.9051 9 188
8g89-assembly1.cif.gz_A hsd17b13 in complex with cofactor and inhibitor 0.9045 8 253
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9322 98 193 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9258 9 197 3.40.50.720
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9231 8 252 3.40.50.720
af_Q4DKY8_26_208_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9205 9 171 3.40.50.720
af_Q54CD7_32_271_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9174 8 225 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6J4RK98-F1-model_v4 Short-chain dehydrogenase/reductase SDR 0.9655 4 268 GO:0016020
GO:0016491
AF-A0A6J4RK98-F1-model_v4 Short-chain dehydrogenase/reductase SDR 0.9514 4 268 GO:0016020
GO:0016491
AF-A0A2A2KGP0-F1-model_v4 Epidermal retinol dehydrogenase 2 0.9458 8 197 GO:0005811
GO:0016020
GO:0016616
AF-A0A644XFA3-F1-model_v4 Short-chain dehydrogenase 0.9453 8 264 GO:0016491
AF-A0A4Q2UPV8-F1-model_v4 SDR family oxidoreductase 0.9421 5 268 GO:0016020
GO:0016491

Map