F290953

General Info

Members Datasets Scaffolds Average Seq Length
189 162 378 204

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10145200|Ga0157374_101452003
Length 234
Sequence LTGTEAGSHRRPAVRPRALIHDISKGPHFMETPVNVAVIYYSATGSVFKLAKAAATEAEKAGAEVRLRKVRELAPDEAIATNEGWSDHVATTQHIGEATLDDLEWADVILLGSPTRFGLPAAQLKQFIDTTGPLWGQGRLVNKIGSSFTSTATAHGGQESTILAMNNTFYHWGCIIVPPGYADPIQFQAGNPYGASHTSNNGAIPPGEVELAAVEFQTRRAVQIAETLRRGRDT

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
33 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
69 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
78 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
81 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
82 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
83 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
86 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
96 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
97 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
98 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
99 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
100 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
101 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
102 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
103 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
104 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
105 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
106 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
107 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
108 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
109 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
110 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
111 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
112 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 2501939600 Micromonospora sp. L5 Isolate Unclassified
115 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
116 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
117 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
118 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
119 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
120 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
121 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
122 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
123 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
124 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
125 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
126 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
127 2855683550 Micromonospora sp. RP3T Isolate Unclassified
128 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
129 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
130 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
131 2858868258 Micromonospora sp. MH33 Isolate Unclassified
132 2858882152 Micromonospora noduli MED15 Isolate Nodule
133 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
134 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
135 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
136 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
137 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
138 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
139 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
140 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
141 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
142 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
143 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
144 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
145 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
146 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
147 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
148 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
149 2902582711 Micromonospora sp. AP08 Isolate Unclassified
150 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
151 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
152 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
153 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
154 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
155 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
156 649633069 Micromonospora sp. L5 Isolate Unclassified
157 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
158 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
159 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
160 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
161 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
162 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.72
Metatranscriptomes 5.82
Isolates 26.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.52
Nodule 3.7
Rhizoplane 0.53
Rhizosphere 52.91
Stem 0
Stem Tuber 0
Unclassified 1.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10145200 3300013296 Bacteria 2305
2 rootL2_10008191 3300003322 Bacteria 16456
3 Ga0006562J51391_1064734 3300003578 Bacteria 6266
4 Ga0006562J51391_1064735 3300003578 Bacteria 5690
5 Ga0070680_100194457 3300005336 Bacteria 1710
6 Ga0070661_100053827 3300005344 Bacteria 2947
7 Ga0070669_100736644 3300005353 Bacteria 834
8 Ga0070714_100818290 3300005435 Bacteria 902
9 Ga0070713_100070008 3300005436 Bacteria 2960
10 Ga0070713_100132459 3300005436 Bacteria 2200
11 Ga0070708_100059802 3300005445 Unclassified 3398
12 Ga0070681_10576956 3300005458 Bacteria 1038
13 Ga0070684_100261086 3300005535 Bacteria 1584
14 Ga0068853_100186492 3300005539 Bacteria 1883
15 Ga0070665_100008920 3300005548 Bacteria 10159
16 Ga0068855_100005008 3300005563 Bacteria 16169
17 Ga0068855_100388175 3300005563 Bacteria 1532
18 Ga0068857_100419461 3300005577 Bacteria 1247
19 Ga0068854_100013432 3300005578 Bacteria 5376
20 Ga0068856_100308371 3300005614 Bacteria 1600
21 Ga0070717_10156501 3300006028 Unclassified 1975
22 Ga0070717_10425939 3300006028 Bacteria 1194
23 Ga0075365_10033013 3300006038 Bacteria 3332
24 Ga0075365_10040263 3300006038 Bacteria 3047
25 Ga0075365_10065746 3300006038 Bacteria 2431
26 Ga0075365_10112117 3300006038 Bacteria 1875
27 Ga0075363_100001477 3300006048 Bacteria 8947
28 Ga0075364_10013305 3300006051 Bacteria 5052
29 Ga0075364_10564384 3300006051 Bacteria 778
30 Ga0075370_10004378 3300006353 Bacteria 6846
31 Ga0075370_10232854 3300006353 Bacteria 1090
32 Ga0075428_100559946 3300006844 Bacteria 1222
33 Ga0105240_10345394 3300009093 Bacteria 1689
34 Ga0105241_10045901 3300009174 Bacteria 3316
35 Ga0105248_10057340 3300009177 Bacteria 4372
36 Ga0105238_10006667 3300009551 Bacteria 11515
37 Ga0105239_10224256 3300010375 Bacteria 2108
38 Ga0105239_10422100 3300010375 Bacteria 1511
39 Ga0157370_10890407 3300013104 Bacteria 808
40 Ga0157372_10272191 3300013307 Bacteria 1968
41 Ga0157379_10091909 3300014968 Bacteria 2722
42 Ga0183367_1022 3300015688 Bacteria 55022
43 Ga0197907_10804964 3300020069 Bacteria 840
44 Ga0206356_10182342 3300020070 Bacteria 2196
45 Ga0206349_1515714 3300020075 Bacteria 1230
46 Ga0206354_10868586 3300020081 Bacteria 2536
47 Ga0206353_11440530 3300020082 Bacteria 5557
48 Ga0213876_10000011 3300021384 Bacteria 414473
49 Ga0213876_10000288 3300021384 Bacteria 45779
50 Ga0224712_10021923 3300022467 Bacteria 2194
51 Ga0224712_10296670 3300022467 Bacteria 755
52 Ga0224712_10409197 3300022467 Bacteria 647
53 Ga0207647_10003293 3300025904 Bacteria 12130
54 Ga0207705_10038345 3300025909 Bacteria 3430
55 Ga0207654_10190428 3300025911 Bacteria 1344
56 Ga0207707_10086958 3300025912 Bacteria 2731
57 Ga0207695_10007827 3300025913 Bacteria 13519
58 Ga0207671_10005504 3300025914 Bacteria 11652
59 Ga0207649_10080364 3300025920 Bacteria 2108
60 Ga0207652_10053509 3300025921 Bacteria 3467
61 Ga0207681_10713662 3300025923 Bacteria 834
62 Ga0207694_10002783 3300025924 Bacteria 14120
63 Ga0207700_10075478 3300025928 Bacteria 2612
64 Ga0207700_10428921 3300025928 Bacteria 1162
65 Ga0207664_10002706 3300025929 Bacteria 11766
66 Ga0207669_10980952 3300025937 Bacteria 709
67 Ga0207711_10489481 3300025941 Bacteria 1146
68 Ga0207667_10256368 3300025949 Bacteria 1789
69 Ga0207667_10406072 3300025949 Bacteria 1387
70 Ga0207674_10023963 3300026116 Bacteria 6527
71 Ga0207698_10226232 3300026142 Bacteria 1694
72 Ga0307517_10031335 3300028786 Bacteria 6192
73 Ga0307508_10027866 3300031616 Bacteria 5111
74 Ga0307514_10150807 3300031649 Bacteria 1560
75 Ga0307516_10113247 3300031730 Bacteria 2511
76 Ga0307413_10101195 3300031824 Bacteria 1905
77 Ga0307410_10295326 3300031852 Bacteria 1277
78 Ga0307414_10663869 3300032004 Bacteria 941
79 Ga0307415_100095241 3300032126 Bacteria 2167
80 Ga0436365_0970387 3300039437 Bacteria 322356
81 Ga0436365_1425589 3300039437 Bacteria 204653
82 Ga0451853_0141607 3300041512 Bacteria 1310
83 Ga0439449_0017593 3300042007 Bacteria 2685
84 Ga0466963_0018044 3300044694 Bacteria 4404
85 Ga0466963_0092224 3300044694 Bacteria 2064
86 Ga0466963_0188778 3300044694 Bacteria 1440
87 Ga0466970_0076979 3300044765 Bacteria 1798
88 Ga0466957_0212891 3300044842 Bacteria 1273
89 Ga0466957_0350326 3300044842 Bacteria 1002
90 Ga0466967_1073611 3300045976 Bacteria 802
91 Ga0495628_0009607 3300046516 Bacteria 8253
92 Ga0495643_0005214 3300046522 Bacteria 8850
93 Ga0495652_0002980 3300046529 Bacteria 17012
94 Ga0495587_0084343 3300046536 Bacteria 1840
95 Ga0495645_0018173 3300046543 Bacteria 5047
96 Ga0495599_0388823 3300046678 Bacteria 832
97 Ga0495670_0002567 3300046691 Bacteria 8983
98 Ga0495600_0010995 3300046809 Bacteria 5631
99 Ga0495581_0103453 3300047315 Bacteria 1655
100 Ga0495685_001201 3300047447 Bacteria 7937
101 Ga0495681_0007437 3300047470 Bacteria 6999
102 Ga0495686_0329931 3300047472 Bacteria 834
103 Ga0496112_0208630 3300048915 Bacteria 1911
104 Ga0496126_0034725 3300048929 Bacteria 4732
105 Ga0501321_039900 3300049537 Bacteria 657
106 Ga0501033_0307493 3300049570 Bacteria 1115
107 Ga0501036_0173263 3300049572 Bacteria 1817
108 Ga0501036_0445791 3300049572 Bacteria 1078
109 Ga0501068_0383834 3300049584 Bacteria 905
110 Ga0501035_0044480 3300049822 Bacteria 3998
111 Ga0501044_0476083 3300049823 Bacteria 1152
112 nmdc:mga03n38_11779_c1 3300050490 Bacteria 3270
113 nmdc:mga03n38_3890_c1 3300050490 Bacteria 4864
114 nmdc:mga00v17_10815_c1 3300050491 Bacteria 5001
115 nmdc:mga00v17_497362_c1 3300050491 Bacteria 790
116 nmdc:mga00v17_70535_c1 3300050491 Bacteria 2164
117 nmdc:mga0yw44_194635_c1 3300050492 Bacteria 1338
118 nmdc:mga0yw44_72109_c1 3300050492 Bacteria 2146
119 nmdc:mga0yw44_8407_c1 3300050492 Bacteria 5141
120 nmdc:mga07m45_6603_c1 3300050496 Bacteria 5879
121 nmdc:mga07m45_90848_c1 3300050496 Bacteria 1090
122 Ga0495655_0003754 3300053083 Bacteria 2535
123 Ga0500578_0010268 3300053086 Bacteria 6069
124 Ga0500644_0076475 3300053088 Bacteria 1220
125 Ga0500646_0134397 3300053090 Bacteria 807
126 Ga0500583_0146608 3300053092 Bacteria 1174
127 Ga0500554_202013 3300053102 Bacteria 665
128 Ga0500569_000492 3300053109 Bacteria 6540
129 Ga0500628_001143 3300053129 Bacteria 4626
130 Ga0500652_000849 3300053131 Bacteria 10100
131 Ga0500561_0000132 3300053137 Bacteria 14306
132 Ga0500579_024686 3300053143 Bacteria 3884
133 Ga0500588_0060969 3300053146 Bacteria 1209
134 Ga0500600_0004010 3300053149 Bacteria 8578
135 Ga0500616_0006509 3300053153 Bacteria 7642
136 Ga0500633_0047688 3300053160 Bacteria 1466
137 Ga0500634_0012477 3300053161 Bacteria 4425
138 Ga0500587_000192 3300053739 Bacteria 6312
139 Ga0466962_0160084 3300061719 Bacteria 1094
140 2501945028 2501939600 Bacteria 6907073
141 2515497016 2515154088 Bacteria 5526283
142 2515758819 2515154137 Bacteria 5711575
143 2516088291 2515154203 Bacteria 5458536
144 2623590549 2622736626 Bacteria 7181580
145 2644439093 2643221678 Bacteria 9540101
146 2772646621 2772190715 Bacteria 6959372
147 2791915956 2791354901 Bacteria 8322202
148 2808849146 2808606359 Bacteria 9866990
149 2831939669 2831935698 Bacteria 5963223
150 2832008109 2832004796 Bacteria 6538017
151 2855675525 2855670206 Bacteria 7120389
152 2855677576 2855676851 Bacteria 7063653
153 2855683942 2855683550 Bacteria 7134265
154 2856864161 2856858025 Bacteria 7255264
155 2857293233 2857288857 Bacteria 7189066
156 2858852914 2858848962 Bacteria 6963058
157 2858871649 2858868258 Bacteria 7683772
158 2858883337 2858882152 Bacteria 7230291
159 2858891363 2858888857 Bacteria 7060307
160 2858901418 2858895516 Bacteria 7378898
161 2858906510 2858902515 Bacteria 7086037
162 2862289130 2862281513 Bacteria 9621493
163 2866070082 2866065130 Bacteria 6518152
164 2867302899 2867302475 Bacteria 7087181
165 2867313879 2867312974 Bacteria 7058875
166 2867325859 2867319477 Bacteria 7069771
167 2867512304 2867507094 Bacteria 6506033
168 2869051874 2869048445 Bacteria 6875584
169 2869064502 2869061728 Bacteria 7112407
170 2869074359 2869068681 Bacteria 7205615
171 2880490025 2880489317 Bacteria 7096270
172 2880502535 2880495981 Bacteria 7340502
173 2883822346 2883821847 Bacteria 5121194
174 2895436750 2895427314 Bacteria 13147766
175 2902582745 2902582711 Bacteria 6187705
176 2919476098 2919468124 Bacteria 9133025
177 2929224374 2929219909 Bacteria 6984360
178 2929230968 2929226422 Bacteria 7248583
179 2996225594 2996221748 Bacteria 6799777
180 3003008672 3002998708 Bacteria 11715108
181 3006327277 3006321560 Bacteria 8247479
182 649814299 649633069 Bacteria 6962533
183 8003856860 8003856774 Bacteria 7675274
184 8003873174 8003870546 Bacteria 7396674
185 8054704970 8054704163 Bacteria 7247792
186 8054733284 8054727385 Bacteria 7558670
187 8054738836 8054734606 Bacteria 6947278
188 8055415882 8055412473 Bacteria 6257500
189 8055416777 8055412473 Bacteria 6257500
190 Ga0157374_10145200
191 rootL2_10008191
192 Ga0006562J51391_1064734
193 Ga0006562J51391_1064735
194 Ga0070680_100194457
195 Ga0070661_100053827
196 Ga0070669_100736644
197 Ga0070714_100818290
198 Ga0070713_100070008
199 Ga0070713_100132459
200 Ga0070708_100059802
201 Ga0070681_10576956
202 Ga0070684_100261086
203 Ga0068853_100186492
204 Ga0070665_100008920
205 Ga0068855_100005008
206 Ga0068855_100388175
207 Ga0068857_100419461
208 Ga0068854_100013432
209 Ga0068856_100308371
210 Ga0070717_10156501
211 Ga0070717_10425939
212 Ga0075365_10033013
213 Ga0075365_10040263
214 Ga0075365_10065746
215 Ga0075365_10112117
216 Ga0075363_100001477
217 Ga0075364_10013305
218 Ga0075364_10564384
219 Ga0075370_10004378
220 Ga0075370_10232854
221 Ga0075428_100559946
222 Ga0105240_10345394
223 Ga0105241_10045901
224 Ga0105248_10057340
225 Ga0105238_10006667
226 Ga0105239_10224256
227 Ga0105239_10422100
228 Ga0157370_10890407
229 Ga0157372_10272191
230 Ga0157379_10091909
231 Ga0183367_1022
232 Ga0197907_10804964
233 Ga0206356_10182342
234 Ga0206349_1515714
235 Ga0206354_10868586
236 Ga0206353_11440530
237 Ga0213876_10000011
238 Ga0213876_10000288
239 Ga0224712_10021923
240 Ga0224712_10296670
241 Ga0224712_10409197
242 Ga0207647_10003293
243 Ga0207705_10038345
244 Ga0207654_10190428
245 Ga0207707_10086958
246 Ga0207695_10007827
247 Ga0207671_10005504
248 Ga0207649_10080364
249 Ga0207652_10053509
250 Ga0207681_10713662
251 Ga0207694_10002783
252 Ga0207700_10075478
253 Ga0207700_10428921
254 Ga0207664_10002706
255 Ga0207669_10980952
256 Ga0207711_10489481
257 Ga0207667_10256368
258 Ga0207667_10406072
259 Ga0207674_10023963
260 Ga0207698_10226232
261 Ga0307517_10031335
262 Ga0307508_10027866
263 Ga0307514_10150807
264 Ga0307516_10113247
265 Ga0307413_10101195
266 Ga0307410_10295326
267 Ga0307414_10663869
268 Ga0307415_100095241
269 Ga0436365_0970387
270 Ga0436365_1425589
271 Ga0451853_0141607
272 Ga0439449_0017593
273 Ga0466963_0018044
274 Ga0466963_0092224
275 Ga0466963_0188778
276 Ga0466970_0076979
277 Ga0466957_0212891
278 Ga0466957_0350326
279 Ga0466967_1073611
280 Ga0495628_0009607
281 Ga0495643_0005214
282 Ga0495652_0002980
283 Ga0495587_0084343
284 Ga0495645_0018173
285 Ga0495599_0388823
286 Ga0495670_0002567
287 Ga0495600_0010995
288 Ga0495581_0103453
289 Ga0495685_001201
290 Ga0495681_0007437
291 Ga0495686_0329931
292 Ga0496112_0208630
293 Ga0496126_0034725
294 Ga0501321_039900
295 Ga0501033_0307493
296 Ga0501036_0173263
297 Ga0501036_0445791
298 Ga0501068_0383834
299 Ga0501035_0044480
300 Ga0501044_0476083
301 nmdc:mga03n38_11779_c1
302 nmdc:mga03n38_3890_c1
303 nmdc:mga00v17_10815_c1
304 nmdc:mga00v17_497362_c1
305 nmdc:mga00v17_70535_c1
306 nmdc:mga0yw44_194635_c1
307 nmdc:mga0yw44_72109_c1
308 nmdc:mga0yw44_8407_c1
309 nmdc:mga07m45_6603_c1
310 nmdc:mga07m45_90848_c1
311 Ga0495655_0003754
312 Ga0500578_0010268
313 Ga0500644_0076475
314 Ga0500646_0134397
315 Ga0500583_0146608
316 Ga0500554_202013
317 Ga0500569_000492
318 Ga0500628_001143
319 Ga0500652_000849
320 Ga0500561_0000132
321 Ga0500579_024686
322 Ga0500588_0060969
323 Ga0500600_0004010
324 Ga0500616_0006509
325 Ga0500633_0047688
326 Ga0500634_0012477
327 Ga0500587_000192
328 Ga0466962_0160084
329 2501945028
330 2515497016
331 2515758819
332 2516088291
333 2623590549
334 2644439093
335 2772646621
336 2791915956
337 2808849146
338 2831939669
339 2832008109
340 2855675525
341 2855677576
342 2855683942
343 2856864161
344 2857293233
345 2858852914
346 2858871649
347 2858883337
348 2858891363
349 2858901418
350 2858906510
351 2862289130
352 2866070082
353 2867302899
354 2867313879
355 2867325859
356 2867512304
357 2869051874
358 2869064502
359 2869074359
360 2880490025
361 2880502535
362 2883822346
363 2895436750
364 2902582745
365 2919476098
366 2929224374
367 2929230968
368 2996225594
369 3003008672
370 3006327277
371 649814299
372 8003856860
373 8003873174
374 8054704970
375 8054733284
376 8054738836
377 8055415882
378 8055416777

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00258

Flavodoxin_1

Flavodoxin

38

172

0.86

PF03358

FMN_red

NADPH-dependent FMN reductase

34

187

0.85

PF02525

Flavodoxin_2

Flavodoxin-like fold

34

191

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ydg-assembly1.cif.gz_B crystal structure of trp repressor binding protein wrba 0.9654 1 203
1ydg-assembly1.cif.gz_B crystal structure of trp repressor binding protein wrba 0.9513 1 203
2rg1-assembly1.cif.gz_B-2 crystal structure of e. coli wrba apoprotein 0.9447 5 200
2zki-assembly1.cif.gz_A crystal structure of hypothetical trp repressor binding protein from sul folobus tokodaii (st0872) 0.9387 3 201
2zki-assembly3.cif.gz_G-3 crystal structure of hypothetical trp repressor binding protein from sul folobus tokodaii (st0872) 0.9367 3 201
ID Description Score Start End Superfamily
1yrhD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9638 2 203 3.40.50.360
1yrhD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9492 2 203 3.40.50.360
2zkiG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9367 3 201 3.40.50.360
4la4A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9321 4 201 3.40.50.360
2zkiG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9175 3 201 3.40.50.360
ID Description Score Start End GO Terms
AF-A0A7W0S4K9-F1-model_v4 NAD(P)H-dependent oxidoreductase 0.994 4 131 GO:0003955
GO:0009055
GO:0010181
GO:0016020
AF-A0A5P2CA85-F1-model_v4 NAD(P)H dehydrogenase 0.9932 3 205 GO:0003955
GO:0010181
GO:0016020
AF-A0A4Q3CEG0-F1-model_v4 deleted 0.9931 2 147
AF-A0A231RL74-F1-model_v4 Flavodoxin-like domain-containing protein 0.9913 2 103 GO:0003955
GO:0010181
GO:0016020
AF-A0A4R6L0C5-F1-model_v4 NAD(P)H dehydrogenase (Quinone) 0.9906 2 200 GO:0003955
GO:0010181
GO:0016020

Map