F290782

General Info

Members Datasets Scaffolds Average Seq Length
189 89 378 477

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100022480|Ga0075434_1000224805
Length 534
Sequence VRNESQERSEEKCVVQCVGRAAQVAAALRFWMSEANNTSWGTTQMVRSPFLTNGRARGLVWLFAGIVASGCAINPATGKNQLMLVSEDQEIAMGRQADSAVITSIGLYPDAVWQRYIQQFGARIAATSERPGLPWTFRVVDDPAVNAFALPGGFIYVTRGLLAHLTSEAELASVVGHEIGHVTARHTAAEMSKQELIGLGLAAGSMANKQVAKYAGTANQALGILYLKFSRDDESQADQLGLRYMRRASYDPRQMPEVFLMLGRLTAAEGGSQLPTWLETHPSSANRVAAISAQIAALPQDFSGTSVNRDAYERLLDGLVFGSNPRQGFFTGNQFSHPDQRFRITFPAGWTTHNGAQAVVAVSSQGDAAIELSQASEANADAAARAFLAQQGITNGSSARLSLTSGLPAVSSSFAAATESGALRGTVLFVEYGGAVYRIVGYAPEARWPSYQGIAEGAERTFQRLTDPAALNIQPQHMDIVTLVRATTIAQLARERASPAAATTLALINQVEVDTPFASGRLVKWVIGLAPPIP

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
38 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
53 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
64 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
65 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
66 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
86 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
87 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
88 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 1.06
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.94
Stem 0
Stem Tuber 0
Unclassified 5.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100022480 3300006871 Bacteria 6141
2 Ga0058860_11662022 3300004801 Bacteria 1561
3 Ga0058860_11943388 3300004801 Bacteria 1567
4 Ga0065707_10017561 3300005295 Bacteria 2176
5 Ga0070680_100039479 3300005336 Unclassified 3820
6 Ga0070692_10007904 3300005345 Bacteria 4715
7 Ga0070669_100000161 3300005353 Bacteria 60072
8 Ga0070703_10000870 3300005406 Bacteria 9734
9 Ga0070709_10001627 3300005434 Bacteria 12150
10 Ga0070709_10004102 3300005434 Bacteria 7854
11 Ga0070709_10008060 3300005434 Bacteria 5780
12 Ga0070713_100018578 3300005436 Bacteria 5284
13 Ga0070701_10004071 3300005438 Bacteria 5867
14 Ga0070711_100000171 3300005439 Bacteria 34583
15 Ga0070705_100002584 3300005440 Bacteria 9074
16 Ga0070705_100004373 3300005440 Bacteria 6879
17 Ga0070705_100024175 3300005440 Bacteria 3276
18 Ga0070694_100005242 3300005444 Bacteria 7834
19 Ga0070694_100008890 3300005444 Bacteria 6155
20 Ga0070694_100034106 3300005444 Bacteria 3354
21 Ga0070694_100094505 3300005444 Unclassified 2103
22 Ga0070694_100145923 3300005444 Bacteria 1723
23 Ga0070708_100033921 3300005445 Bacteria 4436
24 Ga0070708_100051109 3300005445 Bacteria 3661
25 Ga0070708_100058566 3300005445 Bacteria 3432
26 Ga0070662_100000086 3300005457 Bacteria 50761
27 Ga0070706_100003319 3300005467 Bacteria 15887
28 Ga0070707_100046712 3300005468 Bacteria 4144
29 Ga0070707_100106702 3300005468 Bacteria 2717
30 Ga0070707_100207191 3300005468 Bacteria 1911
31 Ga0070699_100015880 3300005518 Bacteria 6464
32 Ga0070699_100033484 3300005518 Bacteria 4439
33 Ga0070699_100056394 3300005518 Bacteria 3402
34 Ga0070699_100090246 3300005518 Bacteria 2678
35 Ga0070697_100009017 3300005536 Bacteria 7791
36 Ga0070697_100051650 3300005536 Bacteria 3340
37 Ga0070686_100006356 3300005544 Bacteria 6559
38 Ga0070695_100000994 3300005545 Bacteria 15428
39 Ga0070695_100006818 3300005545 Bacteria 6761
40 Ga0070695_100015804 3300005545 Bacteria 4560
41 Ga0070695_100019660 3300005545 Bacteria 4115
42 Ga0070695_100024777 3300005545 Bacteria 3700
43 Ga0070695_100126847 3300005545 Bacteria 1753
44 Ga0070696_100011827 3300005546 Bacteria 5849
45 Ga0070696_100014572 3300005546 Bacteria 5277
46 Ga0070696_100025935 3300005546 Bacteria 3986
47 Ga0070696_100033002 3300005546 Unclassified 3555
48 Ga0070704_100001420 3300005549 Bacteria 12787
49 Ga0070704_100002136 3300005549 Bacteria 11005
50 Ga0070704_100003026 3300005549 Bacteria 9559
51 Ga0070704_100027731 3300005549 Bacteria 3760
52 Ga0070704_100034537 3300005549 Unclassified 3431
53 Ga0070704_100067462 3300005549 Bacteria 2583
54 Ga0070664_100004549 3300005564 Bacteria 11126
55 Ga0068859_100052273 3300005617 Bacteria 4107
56 Ga0068862_100000690 3300005844 Bacteria 34475
57 Ga0070716_100025896 3300006173 Bacteria 3136
58 Ga0075428_100012944 3300006844 Bacteria 9278
59 Ga0075428_100024854 3300006844 Bacteria 6627
60 Ga0075428_100033629 3300006844 Bacteria 5659
61 Ga0075431_100002183 3300006847 Bacteria 18708
62 Ga0075433_10002902 3300006852 Bacteria 13138
63 Ga0075433_10006111 3300006852 Bacteria 9484
64 Ga0075433_10091573 3300006852 Bacteria 2688
65 Ga0075433_10124798 3300006852 Bacteria 2287
66 Ga0075434_100002026 3300006871 Bacteria 17597
67 Ga0075434_100004673 3300006871 Bacteria 12372
68 Ga0075434_100007775 3300006871 Bacteria 9923
69 Ga0075434_100008258 3300006871 Bacteria 9669
70 Ga0075434_100018744 3300006871 Bacteria 6689
71 Ga0075434_100043985 3300006871 Bacteria 4430
72 Ga0075434_100086140 3300006871 Bacteria 3141
73 Ga0075434_100086506 3300006871 Bacteria 3134
74 Ga0075434_100131352 3300006871 Bacteria 2523
75 Ga0075434_100242245 3300006871 Bacteria 1823
76 Ga0075429_100085326 3300006880 Bacteria 2753
77 Ga0075436_100039845 3300006914 Bacteria 3242
78 Ga0075436_100045667 3300006914 Bacteria 3022
79 Ga0075436_100085712 3300006914 Bacteria 2187
80 Ga0097620_100052273 3300006931 Bacteria 4107
81 Ga0075435_100003426 3300007076 Bacteria 10756
82 Ga0075435_100008762 3300007076 Bacteria 7282
83 Ga0075435_100017506 3300007076 Bacteria 5427
84 Ga0075435_100035844 3300007076 Bacteria 3939
85 Ga0111539_10099939 3300009094 Bacteria 3406
86 Ga0114129_10091972 3300009147 Bacteria 4202
87 Ga0114129_10366356 3300009147 Bacteria 1906
88 Ga0157377_10115630 3300014745 Bacteria 1618
89 Ga0207653_10000290 3300025885 Bacteria 29243
90 Ga0207653_10006347 3300025885 Bacteria 3689
91 Ga0207699_10041946 3300025906 Bacteria 2647
92 Ga0207684_10010276 3300025910 Bacteria 8238
93 Ga0207684_10056153 3300025910 Unclassified 3340
94 Ga0207684_10144208 3300025910 Unclassified 2048
95 Ga0207663_10000061 3300025916 Bacteria 53664
96 Ga0207663_10000576 3300025916 Bacteria 16195
97 Ga0207660_10003954 3300025917 Bacteria 9655
98 Ga0207646_10003193 3300025922 Bacteria 18731
99 Ga0207646_10006272 3300025922 Bacteria 12332
100 Ga0207646_10075648 3300025922 Bacteria 3009
101 Ga0207646_10129950 3300025922 Unclassified 2266
102 Ga0207646_10161921 3300025922 Bacteria 2019
103 Ga0207681_10000017 3300025923 Bacteria 294161
104 Ga0207700_10034396 3300025928 Bacteria 3637
105 Ga0207706_10000529 3300025933 Bacteria 40514
106 Ga0207665_10023245 3300025939 Bacteria 4083
107 Ga0207679_10011967 3300025945 Bacteria 5640
108 Ga0209588_1012653 3300027671 Unclassified 2563
109 Ga0268265_10000078 3300028380 Bacteria 123744
110 Ga0307408_100027724 3300031548 Bacteria 3907
111 Ga0316576_10008639 3300031727 Bacteria 6511
112 Ga0316578_10014136 3300031728 Bacteria 4254
113 Ga0316578_10033237 3300031728 Bacteria 2954
114 Ga0307405_10003491 3300031731 Bacteria 7231
115 Ga0316577_10005954 3300031733 Bacteria 6423
116 Ga0316577_10008169 3300031733 Bacteria 5599
117 Ga0307410_10002087 3300031852 Bacteria 9468
118 Ga0307406_10024372 3300031901 Bacteria 3614
119 Ga0307407_10001677 3300031903 Bacteria 8206
120 Ga0307409_100031557 3300031995 Bacteria 3826
121 Ga0307409_100080413 3300031995 Bacteria 2630
122 Ga0307416_100011791 3300032002 Bacteria 5853
123 Ga0307414_10013986 3300032004 Bacteria 4795
124 Ga0307415_100027842 3300032126 Bacteria 3586
125 Ga0316583_10017219 3300032133 Bacteria 2598
126 Ga0316580_10009654 3300032139 Unclassified 2904
127 Ga0373929_0000005 3300035085 Bacteria 354831
128 Ga0316582_0008656 3300036647 Bacteria 5477
129 Ga0316582_0020252 3300036647 Bacteria 3908
130 Ga0316582_0022215 3300036647 Unclassified 3763
131 Ga0316584_0003563 3300036712 Bacteria 10166
132 Ga0316584_0004492 3300036712 Bacteria 9234
133 Ga0316584_0112913 3300036712 Bacteria 2033
134 Ga0451577_0037364 3300042876 Unclassified 4372
135 Ga0451577_0057239 3300042876 Bacteria 3476
136 Ga0451577_0173392 3300042876 Bacteria 1944
137 Ga0451576_0003004 3300045051 Bacteria 23845
138 Ga0451576_0005748 3300045051 Bacteria 15444
139 Ga0451576_0008371 3300045051 Bacteria 12144
140 Ga0451576_0010446 3300045051 Bacteria 10646
141 Ga0451576_0018783 3300045051 Bacteria 7558
142 Ga0451576_0027388 3300045051 Bacteria 6121
143 Ga0451576_0034221 3300045051 Bacteria 5397
144 Ga0451576_0044766 3300045051 Bacteria 4662
145 Ga0451576_0049407 3300045051 Bacteria 4413
146 Ga0495672_0001034 3300047320 Bacteria 28616
147 Ga0495615_0003612 3300048090 Bacteria 2611
148 Ga0501036_0066101 3300049572 Bacteria 3059
149 Ga0501039_0038209 3300049575 Bacteria 3709
150 Ga0501041_0056435 3300049577 Bacteria 2400
151 Ga0501068_0036434 3300049584 Bacteria 2941
152 Ga0501071_0002866 3300049587 Bacteria 10632
153 Ga0501072_0011868 3300049588 Bacteria 6655
154 Ga0501075_0016341 3300049591 Bacteria 5343
155 Ga0501075_0066788 3300049591 Bacteria 2714
156 Ga0501077_0004680 3300049593 Bacteria 8314
157 Ga0501080_0001206 3300049742 Bacteria 21435
158 Ga0501080_0098933 3300049742 Bacteria 2707
159 Ga0501081_0112585 3300049743 Bacteria 1932
160 nmdc:mga05p37_135381_c1 3300050507 Bacteria 3022
161 nmdc:mga05p37_64065_c1 3300050507 Bacteria 4523
162 nmdc:mga09592_128759_c1 3300050508 Bacteria 2177
163 nmdc:mga06r32_116562_c1 3300050510 Bacteria 2632
164 nmdc:mga06r32_12117_c1 3300050510 Bacteria 7777
165 nmdc:mga0n895_17032_c1 3300050512 Bacteria 6688
166 nmdc:mga0n895_1846_c1 3300050512 Bacteria 16162
167 nmdc:mga0n895_23519_c1 3300050512 Bacteria 5793
168 nmdc:mga0n895_26915_c1 3300050512 Bacteria 5456
169 nmdc:mga0n895_293736_c1 3300050512 Bacteria 1648
170 nmdc:mga0n895_40969_c1 3300050512 Bacteria 4501
171 nmdc:mga0n895_47684_c1 3300050512 Bacteria 4190
172 nmdc:mga0n895_6900_c1 3300050512 Bacteria 9701
173 nmdc:mga0n895_727_c1 3300050512 Bacteria 23166
174 nmdc:mga0n895_87826_c1 3300050512 Bacteria 3108
175 nmdc:mga0rr50_31655_c1 3300050513 Bacteria 3760
176 nmdc:mga0rr50_61488_c1 3300050513 Bacteria 2830
177 nmdc:mga0rr50_75908_c1 3300050513 Bacteria 2578
178 nmdc:mga08x19_18396_c1 3300050514 Bacteria 4282
179 nmdc:mga08x19_19276_c1 3300050514 Bacteria 4184
180 nmdc:mga08x19_32064_c1 3300050514 Bacteria 3310
181 nmdc:mga08x19_35208_c1 3300050514 Bacteria 3167
182 nmdc:mga08x19_63466_c1 3300050514 Bacteria 2397
183 nmdc:mga08x19_91131_c1 3300050514 Bacteria 2012
184 nmdc:mga0a205_192094_c1 3300050515 Bacteria 1934
185 nmdc:mga0a205_2028_c1 3300050515 Bacteria 17693
186 nmdc:mga0a205_259209_c1 3300050515 Bacteria 1617
187 nmdc:mga0a205_29414_c1 3300050515 Bacteria 5257
188 nmdc:mga0a205_5516_c1 3300050515 Bacteria 11395
189 Ga0501082_0000378 3300060353 Bacteria 39468
190 Ga0075434_100022480
191 Ga0058860_11662022
192 Ga0058860_11943388
193 Ga0065707_10017561
194 Ga0070680_100039479
195 Ga0070692_10007904
196 Ga0070669_100000161
197 Ga0070703_10000870
198 Ga0070709_10001627
199 Ga0070709_10004102
200 Ga0070709_10008060
201 Ga0070713_100018578
202 Ga0070701_10004071
203 Ga0070711_100000171
204 Ga0070705_100002584
205 Ga0070705_100004373
206 Ga0070705_100024175
207 Ga0070694_100005242
208 Ga0070694_100008890
209 Ga0070694_100034106
210 Ga0070694_100094505
211 Ga0070694_100145923
212 Ga0070708_100033921
213 Ga0070708_100051109
214 Ga0070708_100058566
215 Ga0070662_100000086
216 Ga0070706_100003319
217 Ga0070707_100046712
218 Ga0070707_100106702
219 Ga0070707_100207191
220 Ga0070699_100015880
221 Ga0070699_100033484
222 Ga0070699_100056394
223 Ga0070699_100090246
224 Ga0070697_100009017
225 Ga0070697_100051650
226 Ga0070686_100006356
227 Ga0070695_100000994
228 Ga0070695_100006818
229 Ga0070695_100015804
230 Ga0070695_100019660
231 Ga0070695_100024777
232 Ga0070695_100126847
233 Ga0070696_100011827
234 Ga0070696_100014572
235 Ga0070696_100025935
236 Ga0070696_100033002
237 Ga0070704_100001420
238 Ga0070704_100002136
239 Ga0070704_100003026
240 Ga0070704_100027731
241 Ga0070704_100034537
242 Ga0070704_100067462
243 Ga0070664_100004549
244 Ga0068859_100052273
245 Ga0068862_100000690
246 Ga0070716_100025896
247 Ga0075428_100012944
248 Ga0075428_100024854
249 Ga0075428_100033629
250 Ga0075431_100002183
251 Ga0075433_10002902
252 Ga0075433_10006111
253 Ga0075433_10091573
254 Ga0075433_10124798
255 Ga0075434_100002026
256 Ga0075434_100004673
257 Ga0075434_100007775
258 Ga0075434_100008258
259 Ga0075434_100018744
260 Ga0075434_100043985
261 Ga0075434_100086140
262 Ga0075434_100086506
263 Ga0075434_100131352
264 Ga0075434_100242245
265 Ga0075429_100085326
266 Ga0075436_100039845
267 Ga0075436_100045667
268 Ga0075436_100085712
269 Ga0097620_100052273
270 Ga0075435_100003426
271 Ga0075435_100008762
272 Ga0075435_100017506
273 Ga0075435_100035844
274 Ga0111539_10099939
275 Ga0114129_10091972
276 Ga0114129_10366356
277 Ga0157377_10115630
278 Ga0207653_10000290
279 Ga0207653_10006347
280 Ga0207699_10041946
281 Ga0207684_10010276
282 Ga0207684_10056153
283 Ga0207684_10144208
284 Ga0207663_10000061
285 Ga0207663_10000576
286 Ga0207660_10003954
287 Ga0207646_10003193
288 Ga0207646_10006272
289 Ga0207646_10075648
290 Ga0207646_10129950
291 Ga0207646_10161921
292 Ga0207681_10000017
293 Ga0207700_10034396
294 Ga0207706_10000529
295 Ga0207665_10023245
296 Ga0207679_10011967
297 Ga0209588_1012653
298 Ga0268265_10000078
299 Ga0307408_100027724
300 Ga0316576_10008639
301 Ga0316578_10014136
302 Ga0316578_10033237
303 Ga0307405_10003491
304 Ga0316577_10005954
305 Ga0316577_10008169
306 Ga0307410_10002087
307 Ga0307406_10024372
308 Ga0307407_10001677
309 Ga0307409_100031557
310 Ga0307409_100080413
311 Ga0307416_100011791
312 Ga0307414_10013986
313 Ga0307415_100027842
314 Ga0316583_10017219
315 Ga0316580_10009654
316 Ga0373929_0000005
317 Ga0316582_0008656
318 Ga0316582_0020252
319 Ga0316582_0022215
320 Ga0316584_0003563
321 Ga0316584_0004492
322 Ga0316584_0112913
323 Ga0451577_0037364
324 Ga0451577_0057239
325 Ga0451577_0173392
326 Ga0451576_0003004
327 Ga0451576_0005748
328 Ga0451576_0008371
329 Ga0451576_0010446
330 Ga0451576_0018783
331 Ga0451576_0027388
332 Ga0451576_0034221
333 Ga0451576_0044766
334 Ga0451576_0049407
335 Ga0495672_0001034
336 Ga0495615_0003612
337 Ga0501036_0066101
338 Ga0501039_0038209
339 Ga0501041_0056435
340 Ga0501068_0036434
341 Ga0501071_0002866
342 Ga0501072_0011868
343 Ga0501075_0016341
344 Ga0501075_0066788
345 Ga0501077_0004680
346 Ga0501080_0001206
347 Ga0501080_0098933
348 Ga0501081_0112585
349 nmdc:mga05p37_135381_c1
350 nmdc:mga05p37_64065_c1
351 nmdc:mga09592_128759_c1
352 nmdc:mga06r32_116562_c1
353 nmdc:mga06r32_12117_c1
354 nmdc:mga0n895_17032_c1
355 nmdc:mga0n895_1846_c1
356 nmdc:mga0n895_23519_c1
357 nmdc:mga0n895_26915_c1
358 nmdc:mga0n895_293736_c1
359 nmdc:mga0n895_40969_c1
360 nmdc:mga0n895_47684_c1
361 nmdc:mga0n895_6900_c1
362 nmdc:mga0n895_727_c1
363 nmdc:mga0n895_87826_c1
364 nmdc:mga0rr50_31655_c1
365 nmdc:mga0rr50_61488_c1
366 nmdc:mga0rr50_75908_c1
367 nmdc:mga08x19_18396_c1
368 nmdc:mga08x19_19276_c1
369 nmdc:mga08x19_32064_c1
370 nmdc:mga08x19_35208_c1
371 nmdc:mga08x19_63466_c1
372 nmdc:mga08x19_91131_c1
373 nmdc:mga0a205_192094_c1
374 nmdc:mga0a205_2028_c1
375 nmdc:mga0a205_259209_c1
376 nmdc:mga0a205_29414_c1
377 nmdc:mga0a205_5516_c1
378 Ga0501082_0000378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01435

Peptidase_M48

Peptidase family M48

112

295

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sar-assembly1.cif.gz_A e coli bepa/yfgc 0.8104 38 257
6ait-assembly1.cif.gz_E crystal structure of e. coli bepa 0.8011 60 257
6ait-assembly1.cif.gz_B crystal structure of e. coli bepa 0.7633 40 257
6ait-assembly1.cif.gz_A crystal structure of e. coli bepa 0.7631 39 241
2xb3-assembly1.cif.gz_A the structure of cyanobacterial psbp 0.7576 276 407
ID Description Score Start End Superfamily
af_K7KY12_259_325_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9452 76 133 3.30.2010.10
af_Q54HN7_412_496_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9416 61 133 3.30.2010.10
af_Q9FLI5_288_365_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9396 76 130 3.30.2010.10
af_P66948_73_150_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9353 58 130 3.30.2010.10
af_Q9P7G4_129_209_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9099 60 134 3.30.2010.10
ID Description Score Start End GO Terms
AF-X0UWQ9-F1-model_v4 Uncharacterized protein 0.9528 270 473
AF-A0A7X6VVI5-F1-model_v4 LysM domain-containing protein 0.9463 245 470
AF-A0A7C2IW04-F1-model_v4 deleted 0.9386 24 188
AF-A0A2V7QTN7-F1-model_v4 Peptidase M48 domain-containing protein 0.9369 10 475 GO:0004222
GO:0016020
GO:0046872
GO:0051603
AF-A0A2V7YJ36-F1-model_v4 Peptidase M48 0.9237 1 159 GO:0004222
GO:0016020
GO:0046872
GO:0051603

Map