F290169

General Info

Members Datasets Scaffolds Average Seq Length
188 160 376 1068

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862178590|2862184857
Length 1106
Sequence SPRSIPGARRTARTAAAAGLVAALVTAGAAPAFAASGTDDPWTAPSVKTAPAKTPEDKLGKADEQRLAEAQAKGEKSVTVMLATAPGATSDVSKQLHAVAGATVGKQDDRLGYVRATLPMAQAEAALKAAAKLPSVHGIDLKQDIQLDDPTPSGDTTKSAKQLRTSGSYPAPGRDTPAKNPYNPNFETGAVDFVKQHPEADGRGVTIGILDSGVDLGHPALQKTTTGERKIVDWVTSTDPVQDGDGTWLRANTAVSGPTFTAGGKTWKAPAGSYDFSTFAEKATAGGDEAGDLNRDGDTTDTWGVLYDPVAGTVRVDLNNNNDFTDDVPMKPYKDGYQVGYFGEDETDPITGASKRVPFTVEIRKNVAYDAAGHTSDYVNIGVIESEHGTHVAGITSANGLFGGKMSGAAPGAKIVSSRACNWNGGCTNIALTEGMIDLVTNRHVDIVNMSIGGLPALNDGNNARAELYKRLIDTYGVQLVISAGNDGPGVNTIGDPGLADHVISVGASISKETWAANYGSGVSTDYQMMPFSSRGPREDGGFTPTLTAPGAAINSTQTWLPGSPVKESGYSLPAGYSMLQGTSMASPQAAGASALLLSAAKQQGIDLPPVDLRTALTSTAKHIKGVQAYQEGSGLINIVGAWDAIKQTAKKKAPAHEYTVTAPVSSALSFALKTPNVGTGIYDRESGLKAGQKKTYDVTVTRTTGPDKNVRHRLSFKNDDGTFRVLGDDEVNLPLGKPVTVKVQAQPRSGGVHSAILQVDDPKTVGVDQQIMATVIVATPVAGPGFTFTASSTVQRNSTKSYFLNVPAGAQNLEVRMGALRSGSQTRFISIHPYGVAVDPTGTPNCYPNYDNPANTCRPDLRSYANPQAGVWEIEVEARRTSPYLDNSFKLDASVLGVNFDPATQTVPEAKVGTPAPVQWKVTNGFAALEGSLKGGSLGSAKVATPTIKAGETQTSTVTIGAGVEHLDVSIGGTSDKGADLDLYVLDQNGKTVGKSTTSSSDESVSLVKPAPGTYTIQVAGYAVPSGSTTYAYKDVYFAPSLGTVKVDESKTVKLAGGASAQVTADVVAAGAAPEGRQFFGTVQLVNERGTAAGSGSVLIQKVTP

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
3 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
4 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
8 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
9 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
10 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
11 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
12 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
13 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
14 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
15 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
18 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
19 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
20 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
21 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
22 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
23 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
24 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
25 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
26 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
27 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
28 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
29 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
30 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
31 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
32 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
33 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
34 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
35 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
36 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
37 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
38 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
39 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
40 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
41 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
42 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
43 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
44 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
45 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
46 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
47 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
48 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
49 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
54 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
55 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
58 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
59 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
60 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
61 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
62 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
63 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
64 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
65 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
66 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
67 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
68 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
69 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
70 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
71 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
76 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
77 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
78 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
81 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
82 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
83 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
91 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
92 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
97 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
98 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
99 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
100 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
101 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
102 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
103 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
104 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
105 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
106 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
107 2643221548 Streptomyces sp. Root55 Isolate Unclassified
108 2643221578 Streptomyces sp. Root63 Isolate Unclassified
109 2643221647 Streptomyces sp. Root369 Isolate Unclassified
110 2643221670 Streptomyces sp. Root431 Isolate Unclassified
111 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
112 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
113 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
114 2643221714 Streptomyces sp. Root264 Isolate Unclassified
115 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
116 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
117 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
118 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
119 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
120 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
121 2808606448 Streptomyces sp. 193411 Isolate Unclassified
122 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
123 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
124 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
125 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
126 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
127 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
128 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
129 2862574272 Streptomyces sp. AcE210 Isolate Nodule
130 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
131 2867428634 Streptomyces sp. RP5T Isolate Unclassified
132 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
133 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
134 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
135 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
136 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
137 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
138 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
139 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
140 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
141 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
142 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
143 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
144 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
145 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
146 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
147 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
148 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
149 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
150 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
151 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
152 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
153 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
154 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
155 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
156 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
157 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
158 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
159 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
160 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 66.49
Metatranscriptomes 0
Isolates 33.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.38
Nodule 2.66
Rhizoplane 0.53
Rhizosphere 64.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100000405 3300005347 Bacteria 28616
2 Ga0070668_100043533 3300005347 Bacteria 3443
3 Ga0070698_100034802 3300005471 Bacteria 5211
4 Ga0070665_100036896 3300005548 Bacteria 4915
5 Ga0068856_100054193 3300005614 Bacteria 3955
6 Ga0075363_100012972 3300006048 Bacteria 4025
7 Ga0075367_10002939 3300006178 Bacteria 7955
8 Ga0075429_100000969 3300006880 Bacteria 22778
9 Ga0111539_10009623 3300009094 Bacteria 12200
10 Ga0114129_10022524 3300009147 Bacteria 8939
11 Ga0114129_10070413 3300009147 Bacteria 4877
12 Ga0105246_10001076 3300011119 Bacteria 15779
13 Ga0182008_10000833 3300014497 Bacteria 21496
14 Ga0183367_1006 3300015688 Bacteria 648044
15 Ga0209758_1007355 3300025297 Bacteria 7533
16 Ga0207426_1009661 3300025302 Bacteria 3797
17 Ga0207668_10002030 3300025972 Bacteria 11813
18 Ga0207678_10000042 3300026067 Bacteria 94951
19 Ga0307517_10006097 3300028786 Bacteria 17958
20 Ga0307517_10021948 3300028786 Bacteria 8030
21 Ga0307515_10002762 3300028794 Bacteria 37490
22 Ga0307515_10014266 3300028794 Bacteria 14755
23 Ga0307511_10000207 3300030521 Bacteria 59484
24 Ga0307511_10000836 3300030521 Bacteria 32726
25 Ga0307512_10003747 3300030522 Bacteria 17203
26 Ga0307512_10018161 3300030522 Bacteria 6431
27 Ga0307512_10034649 3300030522 Bacteria 4315
28 Ga0307513_10002865 3300031456 Bacteria 23623
29 Ga0307513_10006918 3300031456 Bacteria 14766
30 Ga0307509_10025591 3300031507 Bacteria 6587
31 Ga0307508_10001616 3300031616 Bacteria 25169
32 Ga0307514_10002400 3300031649 Bacteria 19566
33 Ga0307516_10002619 3300031730 Bacteria 23844
34 Ga0307516_10003395 3300031730 Bacteria 20512
35 Ga0307507_10013280 3300033179 Bacteria 10022
36 Ga0307510_10003848 3300033180 Bacteria 17596
37 Ga0307510_10016514 3300033180 Bacteria 8712
38 Ga0307510_10048389 3300033180 Bacteria 4537
39 Ga0395898_0005985 3300037466 Bacteria 13062
40 Ga0395905_0028004 3300037471 Bacteria 5312
41 Ga0395901_0017526 3300038443 Bacteria 7310
42 Ga0439436_0002283 3300041404 Bacteria 5744
43 Ga0451837_0171498 3300041494 Bacteria 4091
44 Ga0451853_0921294 3300041512 Bacteria 9018
45 Ga0451853_2471531 3300041512 Bacteria 5962
46 Ga0439448_0003306 3300042005 Bacteria 4456
47 Ga0439449_0001059 3300042007 Bacteria 10845
48 Ga0439457_000463 3300042014 Bacteria 11700
49 Ga0439457_004023 3300042014 Bacteria 3900
50 Ga0450894_000115 3300042131 Bacteria 13602
51 Ga0450903_001601 3300042138 Bacteria 4204
52 Ga0439458_0002199 3300042157 Bacteria 4820
53 Ga0466969_0005236 3300044656 Bacteria 6905
54 Ga0466972_0000475 3300044658 Bacteria 20367
55 Ga0466965_0014416 3300044683 Bacteria 3741
56 Ga0466961_0004622 3300044693 Bacteria 8639
57 Ga0466961_0009531 3300044693 Bacteria 6181
58 Ga0466970_0000916 3300044765 Bacteria 14252
59 Ga0466957_0010686 3300044842 Bacteria 5276
60 Ga0466959_0026649 3300045049 Bacteria 4284
61 Ga0466958_0000021 3300045836 Bacteria 45509
62 Ga0466967_0008748 3300045976 Bacteria 7458
63 Ga0495627_005111 3300046453 Bacteria 5358
64 Ga0495592_0002420 3300046454 Bacteria 13150
65 Ga0495603_0000262 3300046455 Bacteria 27718
66 Ga0495603_0010228 3300046455 Bacteria 5678
67 Ga0495629_0006226 3300046459 Bacteria 8855
68 Ga0495629_0011431 3300046459 Bacteria 6448
69 Ga0495629_0026925 3300046459 Bacteria 4083
70 Ga0495638_0015317 3300046460 Bacteria 5151
71 Ga0495651_0035606 3300046462 Bacteria 3875
72 Ga0495664_0000463 3300046477 Bacteria 20023
73 Ga0495594_0010272 3300046499 Bacteria 4851
74 Ga0495607_0010302 3300046501 Bacteria 6289
75 Ga0495606_0008150 3300046507 Bacteria 9176
76 Ga0495616_0004063 3300046513 Bacteria 9291
77 Ga0495618_0011136 3300046514 Bacteria 5451
78 Ga0495631_0007132 3300046518 Bacteria 5711
79 Ga0495652_0011487 3300046529 Bacteria 8007
80 Ga0495609_0005703 3300046538 Bacteria 6482
81 Ga0495622_0007483 3300046557 Bacteria 5067
82 Ga0495634_0000458 3300046642 Bacteria 40403
83 Ga0495635_0002912 3300046663 Bacteria 11759
84 Ga0495661_0007120 3300046665 Bacteria 7810
85 Ga0495588_0008576 3300046674 Bacteria 4696
86 Ga0495657_0006202 3300046675 Bacteria 9376
87 Ga0495646_0001259 3300046680 Bacteria 14879
88 Ga0495658_0004237 3300046683 Bacteria 7058
89 Ga0495658_0006662 3300046683 Bacteria 5679
90 Ga0495613_0001161 3300046689 Bacteria 20120
91 Ga0495613_0023858 3300046689 Bacteria 4558
92 Ga0495613_0024578 3300046689 Bacteria 4488
93 Ga0495589_0008213 3300046794 Bacteria 5458
94 Ga0495589_0008911 3300046794 Bacteria 5220
95 Ga0495660_0022308 3300046810 Bacteria 3614
96 Ga0495581_0005734 3300047315 Bacteria 7195
97 Ga0495604_0001455 3300047317 Bacteria 19440
98 Ga0495604_0010276 3300047317 Bacteria 7415
99 Ga0495676_0003203 3300047321 Bacteria 14798
100 Ga0495676_0006305 3300047321 Bacteria 10914
101 Ga0495676_0046731 3300047321 Bacteria 3510
102 Ga0495680_0033572 3300047322 Bacteria 4152
103 Ga0495687_005572 3300047443 Bacteria 7981
104 Ga0495681_0001201 3300047470 Bacteria 19717
105 Ga0495681_0002456 3300047470 Bacteria 13224
106 Ga0495593_0000464 3300047673 Bacteria 22779
107 Ga0495614_0000115 3300048089 Bacteria 27505
108 Ga0495626_0007606 3300048091 Bacteria 6007
109 Ga0496102_0035324 3300048905 Bacteria 4498
110 Ga0501038_0000997 3300049574 Bacteria 25475
111 Ga0501042_0005829 3300049578 Bacteria 7960
112 Ga0501080_0045242 3300049742 Bacteria 4097
113 Ga0501035_0012703 3300049822 Bacteria 7781
114 Ga0501044_0077136 3300049823 Bacteria 3380
115 nmdc:mga0yw44_10804_c1 3300050492 Bacteria 4678
116 nmdc:mga06z11_893_c1 3300050494 Bacteria 10854
117 nmdc:mga04h51_589_c1 3300050495 Bacteria 8657
118 nmdc:mga05p37_17514_c1 3300050507 Bacteria 8649
119 nmdc:mga09592_4092_c1 3300050508 Bacteria 11776
120 nmdc:mga08y16_5500_c1 3300050511 Bacteria 13247
121 Ga0500658_0003486 3300053134 Bacteria 5935
122 Ga0500568_0001074 3300053139 Bacteria 18492
123 Ga0500600_0014447 3300053149 Bacteria 4802
124 Ga0500616_0000116 3300053153 Bacteria 145790
125 Ga0500616_0002156 3300053153 Bacteria 17037
126 2862184857 2862178590 Bacteria 8583590
127 2547406872 2547132111 Bacteria 8013147
128 2585301621 2582581312 Bacteria 7308206
129 2585304766 2582581313 Bacteria 10042643
130 2585319316 2582581314 Bacteria 11452267
131 2616700787 2616644814 Bacteria 11555299
132 2616905627 2616644941 Bacteria 8510691
133 2643759794 2643221548 Bacteria 8053412
134 2643897928 2643221578 Bacteria 9213798
135 2644263102 2643221647 Bacteria 10741251
136 2644385434 2643221670 Bacteria 6497041
137 2644409074 2643221673 Bacteria 9196637
138 2644436437 2643221678 Bacteria 9540101
139 2644462787 2643221682 Bacteria 6743283
140 2644625724 2643221714 Bacteria 9015452
141 2784587898 2784132148 Bacteria 8627943
142 2785368640 2784746768 Bacteria 10036182
143 2786669748 2786546132 Bacteria 10419719
144 2804844917 2802429296 Bacteria 7227771
145 2808841322 2808606359 Bacteria 9866990
146 2808919850 2808606375 Bacteria 9466072
147 2809231492 2808606448 Bacteria 8656184
148 2812358930 2811994879 Bacteria 9313447
149 2812481198 2811994917 Bacteria 7761064
150 2819693633 2818991463 Bacteria 7948711
151 2852642170 2852635781 Bacteria 8251373
152 2862288091 2862281513 Bacteria 9621493
153 2862384874 2862382967 Bacteria 10317375
154 2862386275 2862382967 Bacteria 10317375
155 2862509530 2862507626 Bacteria 9425308
156 2862579959 2862574272 Bacteria 10567477
157 2863405486 2863404153 Bacteria 9672205
158 2867430941 2867428634 Bacteria 9590268
159 2873156517 2873151551 Bacteria 8625867
160 2875393838 2875391855 Bacteria 7600475
161 2877681870 2877676314 Bacteria 9512378
162 2919468719 2919468124 Bacteria 9133025
163 2946050813 2946045630 Bacteria 8527308
164 2946066953 2946064051 Bacteria 8957905
165 2946075259 2946072368 Bacteria 8999607
166 2947230284 2947224130 Bacteria 9938529
167 2954003612 2954002825 Bacteria 9173742
168 2954387011 2954380949 Bacteria 10050426
169 2954676174 2954673503 Bacteria 9685905
170 2954687994 2954682443 Bacteria 9862841
171 2954697844 2954691527 Bacteria 10720516
172 2954704372 2954701450 Bacteria 10834262
173 2954716960 2954711539 Bacteria 10867210
174 2954726911 2954721474 Bacteria 10456478
175 2954734887 2954731030 Bacteria 10243860
176 2954753758 2954749733 Bacteria 10366972
177 2954764805 2954759201 Bacteria 9358192
178 2966603245 2966598605 Bacteria 7676064
179 2990064804 2990059506 Bacteria 9321252
180 3006396730 3006393351 Bacteria 6615579
181 3006501808 3006493962 Bacteria 8825450
182 8003320181 8003314358 Bacteria 10575343
183 8008559584 8008558824 Bacteria 10610750
184 8008564429 8008558824 Bacteria 10610750
185 8008579567 8008574985 Bacteria 7815457
186 8023629302 8023623736 Bacteria 8593882
187 8025419354 8025413630 Bacteria 7014048
188 8047716953 8047710418 Bacteria 11023148
189 Ga0070668_100000405
190 Ga0070668_100043533
191 Ga0070698_100034802
192 Ga0070665_100036896
193 Ga0068856_100054193
194 Ga0075363_100012972
195 Ga0075367_10002939
196 Ga0075429_100000969
197 Ga0111539_10009623
198 Ga0114129_10022524
199 Ga0114129_10070413
200 Ga0105246_10001076
201 Ga0182008_10000833
202 Ga0183367_1006
203 Ga0209758_1007355
204 Ga0207426_1009661
205 Ga0207668_10002030
206 Ga0207678_10000042
207 Ga0307517_10006097
208 Ga0307517_10021948
209 Ga0307515_10002762
210 Ga0307515_10014266
211 Ga0307511_10000207
212 Ga0307511_10000836
213 Ga0307512_10003747
214 Ga0307512_10018161
215 Ga0307512_10034649
216 Ga0307513_10002865
217 Ga0307513_10006918
218 Ga0307509_10025591
219 Ga0307508_10001616
220 Ga0307514_10002400
221 Ga0307516_10002619
222 Ga0307516_10003395
223 Ga0307507_10013280
224 Ga0307510_10003848
225 Ga0307510_10016514
226 Ga0307510_10048389
227 Ga0395898_0005985
228 Ga0395905_0028004
229 Ga0395901_0017526
230 Ga0439436_0002283
231 Ga0451837_0171498
232 Ga0451853_0921294
233 Ga0451853_2471531
234 Ga0439448_0003306
235 Ga0439449_0001059
236 Ga0439457_000463
237 Ga0439457_004023
238 Ga0450894_000115
239 Ga0450903_001601
240 Ga0439458_0002199
241 Ga0466969_0005236
242 Ga0466972_0000475
243 Ga0466965_0014416
244 Ga0466961_0004622
245 Ga0466961_0009531
246 Ga0466970_0000916
247 Ga0466957_0010686
248 Ga0466959_0026649
249 Ga0466958_0000021
250 Ga0466967_0008748
251 Ga0495627_005111
252 Ga0495592_0002420
253 Ga0495603_0000262
254 Ga0495603_0010228
255 Ga0495629_0006226
256 Ga0495629_0011431
257 Ga0495629_0026925
258 Ga0495638_0015317
259 Ga0495651_0035606
260 Ga0495664_0000463
261 Ga0495594_0010272
262 Ga0495607_0010302
263 Ga0495606_0008150
264 Ga0495616_0004063
265 Ga0495618_0011136
266 Ga0495631_0007132
267 Ga0495652_0011487
268 Ga0495609_0005703
269 Ga0495622_0007483
270 Ga0495634_0000458
271 Ga0495635_0002912
272 Ga0495661_0007120
273 Ga0495588_0008576
274 Ga0495657_0006202
275 Ga0495646_0001259
276 Ga0495658_0004237
277 Ga0495658_0006662
278 Ga0495613_0001161
279 Ga0495613_0023858
280 Ga0495613_0024578
281 Ga0495589_0008213
282 Ga0495589_0008911
283 Ga0495660_0022308
284 Ga0495581_0005734
285 Ga0495604_0001455
286 Ga0495604_0010276
287 Ga0495676_0003203
288 Ga0495676_0006305
289 Ga0495676_0046731
290 Ga0495680_0033572
291 Ga0495687_005572
292 Ga0495681_0001201
293 Ga0495681_0002456
294 Ga0495593_0000464
295 Ga0495614_0000115
296 Ga0495626_0007606
297 Ga0496102_0035324
298 Ga0501038_0000997
299 Ga0501042_0005829
300 Ga0501080_0045242
301 Ga0501035_0012703
302 Ga0501044_0077136
303 nmdc:mga0yw44_10804_c1
304 nmdc:mga06z11_893_c1
305 nmdc:mga04h51_589_c1
306 nmdc:mga05p37_17514_c1
307 nmdc:mga09592_4092_c1
308 nmdc:mga08y16_5500_c1
309 Ga0500658_0003486
310 Ga0500568_0001074
311 Ga0500600_0014447
312 Ga0500616_0000116
313 Ga0500616_0002156
314 2862184857
315 2547406872
316 2585301621
317 2585304766
318 2585319316
319 2616700787
320 2616905627
321 2643759794
322 2643897928
323 2644263102
324 2644385434
325 2644409074
326 2644436437
327 2644462787
328 2644625724
329 2784587898
330 2785368640
331 2786669748
332 2804844917
333 2808841322
334 2808919850
335 2809231492
336 2812358930
337 2812481198
338 2819693633
339 2852642170
340 2862288091
341 2862384874
342 2862386275
343 2862509530
344 2862579959
345 2863405486
346 2867430941
347 2873156517
348 2875393838
349 2877681870
350 2919468719
351 2946050813
352 2946066953
353 2946075259
354 2947230284
355 2954003612
356 2954387011
357 2954676174
358 2954687994
359 2954697844
360 2954704372
361 2954716960
362 2954726911
363 2954734887
364 2954753758
365 2954764805
366 2966603245
367 2990064804
368 3006396730
369 3006501808
370 8003320181
371 8008559584
372 8008564429
373 8008579567
374 8023629302
375 8025419354
376 8047716953

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04151

PPC

Bacterial pre-peptidase C-terminal domain

953

1022

0.94

PF00082

Peptidase_S8

Subtilase family

202

653

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7am8-assembly1.cif.gz_A crystal structure of omniligase mutant w189f 0.8602 181 642
1ak9-assembly1.cif.gz_A subtilisin mutant 8321 0.8571 178 641
1s01-assembly1.cif.gz_A large increases in general stability for subtilisin bpn(prime) through incremental changes in the free energy of unfolding 0.855 178 641
3zxy-assembly1.cif.gz_A structure of s218a mutant of the protease domain of pata 0.8544 385 648
5ox2-assembly1.cif.gz_A crystal structure of thymoligase, a substrate-tailored peptiligase variant 0.851 181 641
ID Description Score Start End Superfamily
af_R4GDQ0_201_518_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.8816 311 646 3.40.50.200
af_Q09541_262_565_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.8812 324 646 3.40.50.200
af_Q9UT05_261_577_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.8635 309 652 3.40.50.200
af_F1LTC6_150_217_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8582 687 744 2.60.40.10
af_Q09541_262_565_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.8457 324 646 3.40.50.200
ID Description Score Start End GO Terms
AF-A0A6G3XW98-F1-model_v4 Serine protease 0.9627 913 1076 GO:0006508
GO:0008233
AF-A0A6B3HID7-F1-model_v4 S8 family serine peptidase 0.9488 227 454 GO:0004252
GO:0006508
AF-A0A6B3HID7-F1-model_v4 S8 family serine peptidase 0.9447 227 454 GO:0004252
GO:0006508
AF-A0A6B3H025-F1-model_v4 S8 family serine peptidase 0.9433 579 848 GO:0004252
GO:0006508
AF-A0A6I5H3T1-F1-model_v4 S8 family serine peptidase 0.9413 75 1098 GO:0004252
GO:0006508

Map