F290147

General Info

Members Datasets Scaffolds Average Seq Length
188 150 376 238

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2721755702|2723643590
Length 281
Sequence PSVPRSGWHPATVVANTPETTTAARLELDVEGWPGNAAGQHLDVRLTAPDGYTATRSYSIASAGPATGDTTRVVLAVDRVPDGEVSPFLVDVARAGDRFEVHGPLGAFFVWQPAAAAVSGGAEVTGGADVAGGPTGGADVAARPVAEATRPVQLIAGGSGVVPFVAMAQAHADADDATPFRLLYSVRTPADVFFAPEFERLVAASAPFRLDLVYTREAPAGWPTAPARITREALAEAVLPASETPLVYVCGSTGFVERVASWLIELGHDARAIRTERFGGT

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
81 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
91 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
125 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
126 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
127 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
132 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
133 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
134 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
135 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
136 2643221549 Agromyces sp. Root1464 Isolate Unclassified
137 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
138 2808606372 Agromyces sp. 23-23 Isolate Unclassified
139 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
140 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
141 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
142 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
143 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
144 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
145 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
146 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
147 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
148 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
149 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
150 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.77
Metatranscriptomes 1.6
Isolates 10.64

Biome Distribution

Category Percentage (%)
Aerial Root 0.53
Bulb 0
Endosphere 5.32
Nodule 0
Rhizoplane 3.72
Rhizosphere 81.38
Stem 0
Stem Tuber 0.53
Unclassified 0.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1005256 3300003578 Bacteria 10966
2 Ga0006562J51391_1005259 3300003578 Bacteria 5876
3 Ga0070676_10053888 3300005328 Bacteria 2370
4 Ga0070683_100003557 3300005329 Bacteria 12680
5 Ga0068868_100036133 3300005338 Bacteria 3822
6 Ga0068868_100275013 3300005338 Bacteria 1424
7 Ga0070687_100321085 3300005343 Bacteria 989
8 Ga0070675_100005121 3300005354 Bacteria 10002
9 Ga0070659_100069492 3300005366 Bacteria 2796
10 Ga0070667_100633230 3300005367 Bacteria 987
11 Ga0070709_10036265 3300005434 Bacteria 3003
12 Ga0070714_100028561 3300005435 Bacteria 4630
13 Ga0070713_100516572 3300005436 Bacteria 1128
14 Ga0070700_100002340 3300005441 Bacteria 9649
15 Ga0070663_100009004 3300005455 Bacteria 6163
16 Ga0070678_100036930 3300005456 Bacteria 3425
17 Ga0070662_100005132 3300005457 Bacteria 8349
18 Ga0070681_10140621 3300005458 Bacteria 2344
19 Ga0070684_100044101 3300005535 Bacteria 3856
20 Ga0070704_100812520 3300005549 Bacteria 836
21 Ga0070664_100001517 3300005564 Bacteria 18524
22 Ga0068856_100141546 3300005614 Bacteria 2413
23 Ga0070702_100028941 3300005615 Bacteria 3007
24 Ga0068852_100049685 3300005616 Bacteria 3589
25 Ga0068870_10244886 3300005840 Bacteria 1109
26 Ga0068858_100275659 3300005842 Bacteria 1601
27 Ga0068862_100034618 3300005844 Bacteria 4275
28 Ga0075365_10005304 3300006038 Bacteria 6934
29 Ga0075369_10007631 3300006186 Bacteria 4131
30 Ga0075429_100310835 3300006880 Bacteria 1380
31 Ga0068865_100246943 3300006881 Bacteria 1407
32 Ga0105240_10508479 3300009093 Bacteria 1338
33 Ga0111539_10003857 3300009094 Bacteria 19736
34 Ga0111539_10041151 3300009094 Bacteria 5557
35 Ga0105245_10001438 3300009098 Bacteria 21593
36 Ga0114129_10097630 3300009147 Bacteria 4067
37 Ga0105243_10015430 3300009148 Bacteria 5773
38 Ga0105249_10243834 3300009553 Bacteria 1778
39 Ga0105028_104880 3300009993 Bacteria 1398
40 Ga0105239_10135506 3300010375 Bacteria 2741
41 Ga0157369_10010325 3300013105 Bacteria 10648
42 Ga0157369_10570939 3300013105 Bacteria 1168
43 Ga0157380_10669917 3300014326 Bacteria 1038
44 Ga0197907_10107888 3300020069 Unclassified 2319
45 Ga0207655_1000989 3300025728 Bacteria 29046
46 Ga0207688_10103051 3300025901 Bacteria 1650
47 Ga0207705_10099913 3300025909 Bacteria 2134
48 Ga0207707_10036347 3300025912 Bacteria 4307
49 Ga0207707_10193104 3300025912 Bacteria 1776
50 Ga0207663_10372881 3300025916 Bacteria 1085
51 Ga0207662_10103254 3300025918 Bacteria 1769
52 Ga0207657_10171108 3300025919 Bacteria 1760
53 Ga0207659_10009343 3300025926 Bacteria 6122
54 Ga0207687_10036280 3300025927 Bacteria 3358
55 Ga0207664_10020465 3300025929 Bacteria 4905
56 Ga0207690_10020171 3300025932 Bacteria 4114
57 Ga0207706_10017707 3300025933 Bacteria 6418
58 Ga0207709_10014223 3300025935 Bacteria 4391
59 Ga0207704_10014117 3300025938 Bacteria 4025
60 Ga0207661_10029485 3300025944 Bacteria 4215
61 Ga0207679_10008725 3300025945 Bacteria 6467
62 Ga0207668_10575010 3300025972 Bacteria 979
63 Ga0207677_10023375 3300026023 Bacteria 3817
64 Ga0207678_10044672 3300026067 Bacteria 3832
65 Ga0207708_10030883 3300026075 Bacteria 4065
66 Ga0207675_100090201 3300026118 Bacteria 2882
67 Ga0207683_10095584 3300026121 Bacteria 2649
68 Ga0207698_10054843 3300026142 Bacteria 3068
69 Ga0207428_10029207 3300027907 Bacteria 4573
70 Ga0268265_10020631 3300028380 Bacteria 4602
71 Ga0265338_10252013 3300028800 Bacteria 1302
72 Ga0307413_10054752 3300031824 Bacteria 2423
73 Ga0307409_100428038 3300031995 Bacteria 1271
74 Ga0307416_100087519 3300032002 Bacteria 2660
75 Ga0307416_100729121 3300032002 Bacteria 1082
76 Ga0307416_100951033 3300032002 Bacteria 961
77 Ga0307414_10540654 3300032004 Bacteria 1037
78 Ga0307411_10219739 3300032005 Bacteria 1473
79 Ga0307415_100117417 3300032126 Bacteria 1987
80 Ga0395899_0045377 3300037312 Bacteria 3275
81 Ga0395899_0139834 3300037312 Bacteria 1723
82 Ga0395900_0306609 3300037418 Bacteria 1572
83 Ga0395900_0954882 3300037418 Bacteria 779
84 Ga0395898_0001937 3300037466 Bacteria 26296
85 Ga0395898_0043280 3300037466 Bacteria 4437
86 Ga0395898_0354968 3300037466 Bacteria 1398
87 Ga0395898_0441718 3300037466 Bacteria 1239
88 Ga0395898_0842411 3300037466 Bacteria 856
89 Ga0395901_0005192 3300038443 Bacteria 13145
90 Ga0395901_0190328 3300038443 Bacteria 2152
91 Ga0395901_0307380 3300038443 Bacteria 1643
92 Ga0395901_0308568 3300038443 Bacteria 1639
93 Ga0466972_0035780 3300044658 Bacteria 2431
94 Ga0466960_0302504 3300044901 Bacteria 902
95 Ga0466967_0369602 3300045976 Bacteria 1391
96 Ga0495672_0054935 3300047320 Bacteria 2325
97 Ga0496102_0543916 3300048905 Bacteria 1084
98 Ga0496104_0792087 3300048907 Bacteria 854
99 Ga0496105_0215841 3300048908 Bacteria 1563
100 Ga0496109_0210217 3300048912 Bacteria 1830
101 Ga0496111_0186677 3300048914 Bacteria 1541
102 Ga0496112_0283816 3300048915 Bacteria 1602
103 Ga0496113_0023501 3300048916 Bacteria 4371
104 Ga0496117_0003114 3300048920 Bacteria 19800
105 Ga0496117_0011773 3300048920 Bacteria 7796
106 Ga0496117_0071954 3300048920 Bacteria 2314
107 Ga0496118_0000270 3300048921 Bacteria 91081
108 Ga0496118_0005994 3300048921 Bacteria 13564
109 Ga0496118_0249752 3300048921 Bacteria 1009
110 Ga0496124_0000842 3300048927 Bacteria 50078
111 Ga0496125_0200518 3300048928 Bacteria 1307
112 Ga0501031_0000098 3300049568 Bacteria 46312
113 Ga0501031_0281736 3300049568 Bacteria 1078
114 Ga0501032_0000460 3300049569 Bacteria 32782
115 Ga0501033_0001124 3300049570 Bacteria 24244
116 Ga0501033_0079493 3300049570 Bacteria 2406
117 Ga0501034_0005473 3300049571 Bacteria 13864
118 Ga0501036_0008398 3300049572 Bacteria 8462
119 Ga0501037_0000332 3300049573 Bacteria 39967
120 Ga0501038_0001616 3300049574 Bacteria 20943
121 Ga0501039_0000083 3300049575 Bacteria 71645
122 Ga0501039_0053427 3300049575 Bacteria 3126
123 Ga0501040_0001792 3300049576 Bacteria 13805
124 Ga0501041_0034228 3300049577 Bacteria 3075
125 Ga0501042_0008656 3300049578 Bacteria 6741
126 Ga0501042_0083365 3300049578 Bacteria 2292
127 Ga0501043_0007979 3300049579 Bacteria 8361
128 Ga0501043_0075225 3300049579 Bacteria 2653
129 Ga0501046_0002111 3300049580 Bacteria 18837
130 Ga0501046_0008541 3300049580 Bacteria 8911
131 Ga0501047_0001110 3300049581 Bacteria 26747
132 Ga0501048_0000191 3300049582 Bacteria 39463
133 Ga0501048_0078717 3300049582 Bacteria 2327
134 Ga0501048_0112229 3300049582 Bacteria 1925
135 Ga0501067_0002791 3300049583 Bacteria 9606
136 Ga0501068_0513152 3300049584 Bacteria 778
137 Ga0501069_0000624 3300049585 Bacteria 16331
138 Ga0501072_0015332 3300049588 Bacteria 5878
139 Ga0501072_0164172 3300049588 Bacteria 1772
140 Ga0501073_0003375 3300049589 Bacteria 12003
141 Ga0501074_0000387 3300049590 Bacteria 26149
142 Ga0501074_0235467 3300049590 Bacteria 1303
143 Ga0501076_0049718 3300049592 Bacteria 3317
144 Ga0501076_0057497 3300049592 Bacteria 3088
145 Ga0501079_0002102 3300049741 Bacteria 14300
146 Ga0501080_0000472 3300049742 Bacteria 31265
147 Ga0501081_0002865 3300049743 Bacteria 10949
148 Ga0501035_0000540 3300049822 Bacteria 42049
149 Ga0501044_0005561 3300049823 Bacteria 13992
150 Ga0501044_0114521 3300049823 Bacteria 2702
151 Ga0501045_0002254 3300049824 Bacteria 13088
152 nmdc:mga05p37_26021_c1 3300050507 Bacteria 7114
153 nmdc:mga06r32_638827_c1 3300050510 Bacteria 1033
154 nmdc:mga08y16_2613_c1 3300050511 Bacteria 18493
155 nmdc:mga0a205_666199_c1 3300050515 Bacteria 891
156 nmdc:mga0sz30_29698_c1 3300050516 Bacteria 2255
157 Ga0500559_0000437 3300053136 Bacteria 29587
158 Ga0500559_0001987 3300053136 Bacteria 10999
159 Ga0500573_0022020 3300053140 Bacteria 3656
160 Ga0500573_0028272 3300053140 Bacteria 3229
161 Ga0500577_0028547 3300053142 Bacteria 1923
162 Ga0500616_0001333 3300053153 Bacteria 24248
163 Ga0500616_0002982 3300053153 Bacteria 13395
164 Ga0501084_0003919 3300054114 Bacteria 12114
165 Ga0501084_0010823 3300054114 Bacteria 7555
166 Ga0501082_0100145 3300060353 Bacteria 2506
167 Ga0501082_0188809 3300060353 Bacteria 1793
168 Ga0501082_0411642 3300060353 Bacteria 1180
169 2723643590 2721755702 Bacteria 4373124
170 2515495913 2515154088 Bacteria 5526283
171 2515755728 2515154137 Bacteria 5711575
172 2516088174 2515154203 Bacteria 5458536
173 2588108884 2585428157 Bacteria 3018951
174 2643769010 2643221549 Bacteria 4042819
175 2753302014 2751185788 Bacteria 4541048
176 2808900521 2808606372 Bacteria 4649509
177 2809225897 2808606447 Bacteria 3572005
178 2819667997 2818991458 Bacteria 4794049
179 2852635206 2852632344 Bacteria 3463163
180 2857731008 2857729791 Bacteria 4040535
181 2870624475 2870622029 Bacteria 3643329
182 2899376781 2899370129 Bacteria 6781179
183 2919044731 2919042368 Bacteria 3905917
184 2928107810 2928104781 Bacteria 3877447
185 2928122429 2928121344 Bacteria 3972376
186 2935411631 2935409751 Bacteria 4179611
187 2984554142 2984551494 Bacteria 3877562
188 8046355529 8046352972 Bacteria 3613806
189 Ga0006562J51391_1005256
190 Ga0006562J51391_1005259
191 Ga0070676_10053888
192 Ga0070683_100003557
193 Ga0068868_100036133
194 Ga0068868_100275013
195 Ga0070687_100321085
196 Ga0070675_100005121
197 Ga0070659_100069492
198 Ga0070667_100633230
199 Ga0070709_10036265
200 Ga0070714_100028561
201 Ga0070713_100516572
202 Ga0070700_100002340
203 Ga0070663_100009004
204 Ga0070678_100036930
205 Ga0070662_100005132
206 Ga0070681_10140621
207 Ga0070684_100044101
208 Ga0070704_100812520
209 Ga0070664_100001517
210 Ga0068856_100141546
211 Ga0070702_100028941
212 Ga0068852_100049685
213 Ga0068870_10244886
214 Ga0068858_100275659
215 Ga0068862_100034618
216 Ga0075365_10005304
217 Ga0075369_10007631
218 Ga0075429_100310835
219 Ga0068865_100246943
220 Ga0105240_10508479
221 Ga0111539_10003857
222 Ga0111539_10041151
223 Ga0105245_10001438
224 Ga0114129_10097630
225 Ga0105243_10015430
226 Ga0105249_10243834
227 Ga0105028_104880
228 Ga0105239_10135506
229 Ga0157369_10010325
230 Ga0157369_10570939
231 Ga0157380_10669917
232 Ga0197907_10107888
233 Ga0207655_1000989
234 Ga0207688_10103051
235 Ga0207705_10099913
236 Ga0207707_10036347
237 Ga0207707_10193104
238 Ga0207663_10372881
239 Ga0207662_10103254
240 Ga0207657_10171108
241 Ga0207659_10009343
242 Ga0207687_10036280
243 Ga0207664_10020465
244 Ga0207690_10020171
245 Ga0207706_10017707
246 Ga0207709_10014223
247 Ga0207704_10014117
248 Ga0207661_10029485
249 Ga0207679_10008725
250 Ga0207668_10575010
251 Ga0207677_10023375
252 Ga0207678_10044672
253 Ga0207708_10030883
254 Ga0207675_100090201
255 Ga0207683_10095584
256 Ga0207698_10054843
257 Ga0207428_10029207
258 Ga0268265_10020631
259 Ga0265338_10252013
260 Ga0307413_10054752
261 Ga0307409_100428038
262 Ga0307416_100087519
263 Ga0307416_100729121
264 Ga0307416_100951033
265 Ga0307414_10540654
266 Ga0307411_10219739
267 Ga0307415_100117417
268 Ga0395899_0045377
269 Ga0395899_0139834
270 Ga0395900_0306609
271 Ga0395900_0954882
272 Ga0395898_0001937
273 Ga0395898_0043280
274 Ga0395898_0354968
275 Ga0395898_0441718
276 Ga0395898_0842411
277 Ga0395901_0005192
278 Ga0395901_0190328
279 Ga0395901_0307380
280 Ga0395901_0308568
281 Ga0466972_0035780
282 Ga0466960_0302504
283 Ga0466967_0369602
284 Ga0495672_0054935
285 Ga0496102_0543916
286 Ga0496104_0792087
287 Ga0496105_0215841
288 Ga0496109_0210217
289 Ga0496111_0186677
290 Ga0496112_0283816
291 Ga0496113_0023501
292 Ga0496117_0003114
293 Ga0496117_0011773
294 Ga0496117_0071954
295 Ga0496118_0000270
296 Ga0496118_0005994
297 Ga0496118_0249752
298 Ga0496124_0000842
299 Ga0496125_0200518
300 Ga0501031_0000098
301 Ga0501031_0281736
302 Ga0501032_0000460
303 Ga0501033_0001124
304 Ga0501033_0079493
305 Ga0501034_0005473
306 Ga0501036_0008398
307 Ga0501037_0000332
308 Ga0501038_0001616
309 Ga0501039_0000083
310 Ga0501039_0053427
311 Ga0501040_0001792
312 Ga0501041_0034228
313 Ga0501042_0008656
314 Ga0501042_0083365
315 Ga0501043_0007979
316 Ga0501043_0075225
317 Ga0501046_0002111
318 Ga0501046_0008541
319 Ga0501047_0001110
320 Ga0501048_0000191
321 Ga0501048_0078717
322 Ga0501048_0112229
323 Ga0501067_0002791
324 Ga0501068_0513152
325 Ga0501069_0000624
326 Ga0501072_0015332
327 Ga0501072_0164172
328 Ga0501073_0003375
329 Ga0501074_0000387
330 Ga0501074_0235467
331 Ga0501076_0049718
332 Ga0501076_0057497
333 Ga0501079_0002102
334 Ga0501080_0000472
335 Ga0501081_0002865
336 Ga0501035_0000540
337 Ga0501044_0005561
338 Ga0501044_0114521
339 Ga0501045_0002254
340 nmdc:mga05p37_26021_c1
341 nmdc:mga06r32_638827_c1
342 nmdc:mga08y16_2613_c1
343 nmdc:mga0a205_666199_c1
344 nmdc:mga0sz30_29698_c1
345 Ga0500559_0000437
346 Ga0500559_0001987
347 Ga0500573_0022020
348 Ga0500573_0028272
349 Ga0500577_0028547
350 Ga0500616_0001333
351 Ga0500616_0002982
352 Ga0501084_0003919
353 Ga0501084_0010823
354 Ga0501082_0100145
355 Ga0501082_0188809
356 Ga0501082_0411642
357 2723643590
358 2515495913
359 2515755728
360 2516088174
361 2588108884
362 2643769010
363 2753302014
364 2808900521
365 2809225897
366 2819667997
367 2852635206
368 2857731008
369 2870624475
370 2899376781
371 2919044731
372 2928107810
373 2928122429
374 2935411631
375 2984554142
376 8046355529

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

154

261

0.94

PF00970

FAD_binding_6

Oxidoreductase FAD-binding domain

11

110

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7c3a-assembly2.cif.gz_B ferredoxin reductase in carbazole 1,9a-dioxygenase 0.8826 5 238
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8749 5 241
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8636 7 240
5yly-assembly1.cif.gz_A crystal structure of the cytochrome b5 reductase domain of ulva prolifera nitrate reductase 0.8598 5 238
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8579 5 241
ID Description Score Start End Superfamily
af_Q4DLP7_148_306_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9243 112 236 3.40.50.80
af_A0A1D6N8X4_138_306_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9192 97 236 3.40.50.80
af_I1KVY3_156_295_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9101 97 234 3.40.50.80
af_Q5VR12_158_311_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9006 97 236 3.40.50.80
af_P38626_132_273_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.8976 97 230 3.40.50.80
ID Description Score Start End GO Terms
AF-A0A5P9YTM1-F1-model_v4 deleted 0.9769 1 240
AF-A0A286HAY6-F1-model_v4 Ferredoxin-NADP reductase 0.9673 4 241 GO:0016491
GO:0051537
AF-A0A7Y6CKD3-F1-model_v4 deleted 0.9662 5 179
AF-A0A1H1HUB2-F1-model_v4 Ferredoxin-NADP reductase 0.9642 2 241 GO:0016491
GO:0051537
AF-A0A4R4TPI3-F1-model_v4 Oxidoreductase 0.9626 2 240 GO:0016491
GO:0051537

Map